Miyakogusa Predicted Gene
- Lj0g3v0254039.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0254039.1 Non Chatacterized Hit- tr|F6I6N4|F6I6N4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,25.93,3e-18,PPR: pentatricopeptide repeat domain,Pentatricopeptide
repeat; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
,NODE_67523_length_2253_cov_13.905903.path2.1
(537 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 748 0.0
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 448 e-126
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 425 e-119
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 424 e-119
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 420 e-117
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 418 e-117
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 416 e-116
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 412 e-115
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 410 e-114
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 406 e-113
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 405 e-113
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 405 e-113
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 405 e-113
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 404 e-113
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 402 e-112
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 401 e-112
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 400 e-111
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 399 e-111
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 399 e-111
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 399 e-111
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 398 e-111
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 398 e-111
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 395 e-110
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 389 e-108
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 389 e-108
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 388 e-108
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 387 e-107
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 387 e-107
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 385 e-107
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 385 e-107
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 384 e-106
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 382 e-106
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 382 e-106
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 380 e-105
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 378 e-105
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 378 e-105
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 378 e-105
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 377 e-105
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 376 e-104
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 375 e-104
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 373 e-103
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 370 e-102
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 370 e-102
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 370 e-102
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 369 e-102
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 369 e-102
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 368 e-102
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 368 e-102
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 367 e-102
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 366 e-101
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 366 e-101
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 365 e-101
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 365 e-101
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 362 e-100
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 362 e-100
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 361 e-100
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 360 1e-99
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 358 5e-99
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 356 3e-98
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 354 1e-97
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 352 3e-97
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 351 6e-97
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 350 1e-96
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 347 1e-95
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 343 2e-94
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 340 2e-93
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 339 3e-93
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 338 4e-93
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 337 1e-92
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 336 3e-92
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 335 4e-92
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 329 3e-90
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 328 6e-90
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 5e-87
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 314 1e-85
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 3e-85
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 312 3e-85
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 312 4e-85
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 1e-81
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 1e-79
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 1e-77
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 2e-77
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 7e-77
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 282 3e-76
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 282 3e-76
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 282 4e-76
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 282 5e-76
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 1e-74
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 1e-74
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 4e-74
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 275 6e-74
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 7e-74
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 273 2e-73
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 6e-73
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 6e-73
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 7e-73
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 270 2e-72
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 266 3e-71
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 265 4e-71
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 262 4e-70
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 5e-70
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 2e-69
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 4e-69
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 8e-69
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 2e-68
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 256 4e-68
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 255 5e-68
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 2e-67
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 1e-66
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 1e-66
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 249 5e-66
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 9e-66
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 6e-65
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 2e-64
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 2e-64
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 4e-64
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 5e-64
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 242 5e-64
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 241 7e-64
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 8e-64
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 5e-63
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 5e-63
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 6e-63
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 9e-63
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 1e-62
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 1e-62
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 237 2e-62
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 236 4e-62
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 7e-62
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 8e-62
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 9e-62
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 2e-61
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 4e-61
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 5e-61
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 229 5e-60
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 4e-59
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 7e-59
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 7e-59
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 223 4e-58
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 222 6e-58
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 6e-58
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 222 6e-58
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 2e-57
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 220 2e-57
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 2e-57
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 4e-57
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 5e-57
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 5e-57
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 216 3e-56
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 3e-56
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 3e-56
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 214 1e-55
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 213 3e-55
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 4e-55
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 209 3e-54
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 7e-54
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 207 1e-53
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 207 1e-53
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 5e-53
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 3e-52
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 3e-51
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 2e-50
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 3e-50
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 3e-49
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 191 8e-49
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 191 1e-48
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 2e-48
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 1e-47
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 3e-47
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 1e-46
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 180 2e-45
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 2e-43
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 3e-43
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 6e-41
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 1e-35
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 7e-33
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 88 2e-17
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 85 2e-16
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 82 1e-15
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 80 2e-15
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 80 3e-15
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 77 2e-14
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 76 7e-14
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 72 7e-13
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 72 1e-12
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 1e-12
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 3e-12
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 6e-12
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 6e-12
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 69 1e-11
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 4e-11
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 4e-11
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 66 6e-11
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 9e-11
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 60 5e-09
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 60 5e-09
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 5e-09
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 6e-09
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 59 8e-09
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 59 8e-09
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 59 1e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 59 1e-08
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 6e-08
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 54 3e-07
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 4e-07
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 6e-07
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 7e-07
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 52 1e-06
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 1e-06
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 51 2e-06
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/537 (66%), Positives = 430/537 (80%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY +LGS+D ARKVFD+TR+RTIY+WNA FRAL + G GEE+L LY +MN G+ SDRFT
Sbjct: 121 MYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFT 180
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
YTYVLKACV SE +V L KGKEIHA++ R GY ++++MTTL+D+YA+FGC+ YA+ VF
Sbjct: 181 YTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVF 240
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
MP +N VSWSAMI CYAKN +AL F +M+ E DS PNSVTMVSV
Sbjct: 241 GGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAA 300
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+HG+ILRRGLDSI+PVI+AL+TMYGRCG++ +G+RVFD++ + DVVSWNSLIS
Sbjct: 301 LEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISS 360
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
YG +GYGKKAIQIFE M+ G SP+ ++F++VL ACSH GLVEEGK LFE+M + I P
Sbjct: 361 YGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKP 420
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
+EHYACMVDLLGRANRLDEA K+++DM EPGP VWGSLLGSCRIH N ELAERAS L
Sbjct: 421 QIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRL 480
Query: 361 FELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 420
F LEP NAGNYVLLADIYAEA+MW +VK V+KL+ R LQK+PG W+EV++K+YSFVS
Sbjct: 481 FALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSV 540
Query: 421 EEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLI 480
+E NP +E++ A L+KL+ +MKE+GY PQT V Y+L+ EKERI+LGHSEKLA+AFGLI
Sbjct: 541 DEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLI 600
Query: 481 NTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
NT KGE IRITKNLRLCEDCH FTKFISKF +EILVRDVNRFH F++GVCSCG+YW
Sbjct: 601 NTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 153/337 (45%), Gaps = 38/337 (11%)
Query: 27 NAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHA 86
N ++L G+ L + R ++ PS + TY ++ C L +H
Sbjct: 50 NQLIQSLCKEGK---LKQAIRVLSQESSPSQQ-TYELLILCCGHRS----SLSDALRVHR 101
Query: 87 NILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAM------------ 134
+IL +G +++ + T L+ +Y+ G + YA VF + W+A+
Sbjct: 102 HILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEE 161
Query: 135 -IGCYAK-NDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFIL 192
+G Y K N + V++ + VL+AC + +V + +H +
Sbjct: 162 VLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHL------------MKGKEIHAHLT 209
Query: 193 RRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQ 252
RRG S + ++ L+ MY R G + VF + +VVSW+++I+ Y NG +A++
Sbjct: 210 RRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALR 269
Query: 253 IFENMIHQ--GVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVD 310
F M+ + SP+ ++ ++VL AC+ +E+GK++ +L + + + + +V
Sbjct: 270 TFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR-GLDSILPVISALVT 328
Query: 311 LLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 347
+ GR +L+ ++ + M + W SL+ S +H
Sbjct: 329 MYGRCGKLEVGQRVFDRM-HDRDVVSWNSLISSYGVH 364
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 448 bits (1152), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/537 (42%), Positives = 326/537 (60%), Gaps = 5/537 (0%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G LD A+ VF E +R++ + + A G E ++L+ +M GI D +T
Sbjct: 340 MYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYT 399
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
T VL C L +GK +H I + +I V L+D+YAK G + A VF
Sbjct: 400 VTAVLNCCARYRL----LDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVF 455
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
M K+ +SW+ +IG Y+KN +AL LF+ ++LE P+ T+ V
Sbjct: 456 SEMRVKDIISWNTIIGGYSKNCYANEALSLFN-LLLEEKRFSPDERTVACVLPACASLSA 514
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+HG+I+R G S V N+L+ MY +CG + + +FD + + D+VSW +I+
Sbjct: 515 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG 574
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
YG +G+GK+AI +F M G+ ISF+++L ACSH+GLV+EG F M + +I P
Sbjct: 575 YGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP 634
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
+EHYAC+VD+L R L +A + IE+MP P T+WG+LL CRIH + +LAE+ + +
Sbjct: 635 TVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKV 694
Query: 361 FELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 420
FELEP N G YVL+A+IYAEA+ W VK +RK +G+R L+K PGCSWIE+K ++ FV+
Sbjct: 695 FELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAG 754
Query: 421 EEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLI 480
+ NP+ E + A L K+ M E+GY+P T D +E EKE L GHSEKLA+A G+I
Sbjct: 755 DSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGII 814
Query: 481 NTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
++ G+ IR+TKNLR+C DCH KF+SK REI++RD NRFH F+DG CSC +W
Sbjct: 815 SSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 169/365 (46%), Gaps = 14/365 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY G L A +VFDE + WN LA G + L+++M SG+ D +T
Sbjct: 138 MYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYT 197
Query: 61 YTYVLKACVVSEFS-VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
++ CV FS + + G+++H IL+ G+ E V +L+ Y K + A V
Sbjct: 198 FS-----CVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKV 252
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F M ++ +SW+++I Y N + K L +F QM++ + + T+VSV
Sbjct: 253 FDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE--IDLATIVSVFAGCADSR 310
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
VH ++ N L+ MY +CG++ + VF ++ + VVS+ S+I+
Sbjct: 311 LISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIA 370
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
Y G +A+++FE M +G+SP + VL C+ L++EGK + E +
Sbjct: 371 GYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEN---D 427
Query: 300 PGMEHYA--CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERAS 357
G + + ++D+ + + EA + +M + W +++G +C A A
Sbjct: 428 LGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKD-IISWNTIIGGYSKNCYANEALSLF 486
Query: 358 AMLFE 362
+L E
Sbjct: 487 NLLLE 491
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 141/322 (43%), Gaps = 13/322 (4%)
Query: 9 DCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELY-RQMNWSGIPSDRFTYTYVLKA 67
DC + T +R++ N R G E ++L W P T VL+
Sbjct: 49 DCVDSI--TTFDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR---TLCSVLQL 103
Query: 68 CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKN 127
C S+ L+ GKE+ I +G+ + ++ + L +Y G + A+ VF + +
Sbjct: 104 CADSK----SLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK 159
Query: 128 SVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXV 187
++ W+ ++ AK+ ++ LF +M+ + +S T V +
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVE--MDSYTFSCVSKSFSSLRSVHGGEQL 217
Query: 188 HGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYG 247
HGFIL+ G V N+L+ Y + + +VFD++ DV+SWNS+I+ Y +NG
Sbjct: 218 HGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLA 277
Query: 248 KKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC 307
+K + +F M+ G+ + ++V C+ + L+ G+ + S+ K
Sbjct: 278 EKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAV-HSIGVKACFSREDRFCNT 336
Query: 308 MVDLLGRANRLDEAIKLIEDMP 329
++D+ + LD A + +M
Sbjct: 337 LLDMYSKCGDLDSAKAVFREMS 358
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 425 bits (1092), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/537 (40%), Positives = 318/537 (59%), Gaps = 7/537 (1%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + GSL+ AR++FD ER + WN+ A +E + ++++M G+ +
Sbjct: 280 MYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 339
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
L AC + L++G+ IH + G + N+ V+ +L+ +Y K + A S+F
Sbjct: 340 VMGALHACA----DLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMF 395
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+ ++ VSW+AMI +A+N P+ AL F QM P++ T VSV
Sbjct: 396 GKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVK--PDTFTYVSVITAIAELSI 453
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+HG ++R LD + V AL+ MY +CG I I +FD + V +WN++I
Sbjct: 454 THHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDG 513
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
YG +G+GK A+++FE M + P+ ++F++V+ ACSH+GLVE G F M Y I
Sbjct: 514 YGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIEL 573
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
M+HY MVDLLGRA RL+EA I MP +P V+G++LG+C+IH N AE+A+ L
Sbjct: 574 SMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERL 633
Query: 361 FELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 420
FEL P + G +VLLA+IY A MW V VR M ++ L+K PGCS +E+K +++SF S
Sbjct: 634 FELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSG 693
Query: 421 EEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLI 480
+P +K+ A L KL +KE GY P TN+V ++ KE++L HSEKLA++FGL+
Sbjct: 694 STAHPDSKKIYAFLEKLICHIKEAGYVPDTNLV-LGVENDVKEQLLSTHSEKLAISFGLL 752
Query: 481 NTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
NT G TI + KNLR+C DCH TK+IS REI+VRD+ RFH F++G CSCG+YW
Sbjct: 753 NTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 153/283 (54%), Gaps = 6/283 (2%)
Query: 6 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 65
GS+D A +VF+ + +++ + A V ++ L+ + +M + + + +TY+L
Sbjct: 83 GSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLL 142
Query: 66 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA 125
K C L+ GKEIH +++ G+ ++ MT L ++YAK ++ A VF MP
Sbjct: 143 KVCGDEA----ELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPE 198
Query: 126 KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXX 185
++ VSW+ ++ Y++N M ALE+ M E P+ +T+VSV
Sbjct: 199 RDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK--PSFITIVSVLPAVSALRLISVGK 256
Query: 186 XVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNG 245
+HG+ +R G DS++ + AL+ MY +CG + ++FD + +VVSWNS+I Y N
Sbjct: 257 EIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNE 316
Query: 246 YGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKIL 288
K+A+ IF+ M+ +GV P+ +S + L AC+ G +E G+ +
Sbjct: 317 NPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 129/270 (47%), Gaps = 12/270 (4%)
Query: 78 LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGC 137
L++ ++I + ++G + T L+ ++ ++G + A VF + +K +V + M+
Sbjct: 50 LKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKG 109
Query: 138 YAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD 197
+AK KAL+ F +M + D P + +HG +++ G
Sbjct: 110 FAKVSDLDKALQFFVRMRYD--DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFS 167
Query: 198 SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM 257
+ + L MY +C +++ +VFD++ D+VSWN++++ Y NG + A+++ ++M
Sbjct: 168 LDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSM 227
Query: 258 IHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHY----ACMVDLLG 313
+ + PS+I+ ++VL A S L+ GK + Y + G + +VD+
Sbjct: 228 CEENLKPSFITIVSVLPAVSALRLISVGK-----EIHGYAMRSGFDSLVNISTALVDMYA 282
Query: 314 RANRLDEAIKLIEDMPFEPGPTVWGSLLGS 343
+ L+ A +L + M E W S++ +
Sbjct: 283 KCGSLETARQLFDGM-LERNVVSWNSMIDA 311
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 424 bits (1090), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/541 (40%), Positives = 328/541 (60%), Gaps = 5/541 (0%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY G L+ ARKVFDE +R I W + R + G + + L++ + D
Sbjct: 120 MYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAM 179
Query: 61 YTYVLK-ACVVSEFSVYPLQKGKE-IHANILRHGYEENIHVMTTLLDVYAKFG--CISYA 116
+ + V+S S P + E IH+ +++ G++ + V TLLD YAK G ++ A
Sbjct: 180 FLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVA 239
Query: 117 NSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXX 176
+F + K+ VS+++++ YA++ M +A E+F ++V + N++T+ +V
Sbjct: 240 RKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTF-NAITLSTVLLAVS 298
Query: 177 XXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNS 236
+H ++R GL+ + V ++I MY +CG + + FD++KN +V SW +
Sbjct: 299 HSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTA 358
Query: 237 LISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKY 296
+I+ YG +G+ KA+++F MI GV P+YI+F++VL ACSHAGL EG F +M ++
Sbjct: 359 MIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRF 418
Query: 297 RIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERA 356
+ PG+EHY CMVDLLGRA L +A LI+ M +P +W SLL +CRIH N ELAE +
Sbjct: 419 GVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEIS 478
Query: 357 SAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYS 416
A LFEL+ N G Y+LL+ IYA+A W DV+ VR +M R L K PG S +E+ +++
Sbjct: 479 VARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHV 538
Query: 417 FVSSEEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVA 476
F+ +E++PQ EK+ L +L+ ++ E GY T+ V +D+DE EKE L HSEKLA+A
Sbjct: 539 FLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIA 598
Query: 477 FGLINTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEY 536
FG++NTV G T+ + KNLR+C DCH K ISK +RE +VRD RFH F+DG CSCG+Y
Sbjct: 599 FGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDY 658
Query: 537 W 537
W
Sbjct: 659 W 659
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 175/352 (49%), Gaps = 22/352 (6%)
Query: 14 VFDETRERT-IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSE 72
+F+ ++T ++ WN+ LA G E L + M + R ++ +KAC
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACS--- 87
Query: 73 FSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWS 132
S++ + GK+ H GY+ +I V + L+ +Y+ G + A VF +P +N VSW+
Sbjct: 88 -SLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWT 146
Query: 133 AMIGCYAKNDMPVKALELFHQMVLEACDS----IPNSVTMVSVXXXXXXXXXXXXXXXVH 188
+MI Y N + A+ LF ++++ D +S+ +VSV +H
Sbjct: 147 SMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIH 206
Query: 189 GFILRRGLDSIMPVINALITMYGRCGE--ISIGERVFDKVKNPDVVSWNSLISMYGNNGY 246
F+++RG D + V N L+ Y + GE +++ ++FD++ + D VS+NS++S+Y +G
Sbjct: 207 SFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGM 266
Query: 247 GKKAIQIFENMI-HQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHY 305
+A ++F ++ ++ V+ + I+ TVL A SH+G + GK + + + I G+E
Sbjct: 267 SNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQV-----IRMGLEDD 321
Query: 306 ----ACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 353
++D+ + R++ A K + M W +++ +H +A A
Sbjct: 322 VIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMHGHAAKA 372
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/530 (39%), Positives = 317/530 (59%), Gaps = 6/530 (1%)
Query: 8 LDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA 67
+D R+VF+ + + +N A G E+ L + R+M + + D FT + VL
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLP- 250
Query: 68 CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKN 127
+ SE+ + KGKEIH ++R G + ++++ ++L+D+YAK I + VF + ++
Sbjct: 251 -IFSEY--VDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRD 307
Query: 128 SVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXV 187
+SW++++ Y +N +AL LF QMV P +V SV +
Sbjct: 308 GISWNSLVAGYVQNGRYNEALRLFRQMVTAKVK--PGAVAFSSVIPACAHLATLHLGKQL 365
Query: 188 HGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYG 247
HG++LR G S + + +AL+ MY +CG I ++FD++ D VSW ++I + +G+G
Sbjct: 366 HGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHG 425
Query: 248 KKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC 307
+A+ +FE M QGV P+ ++F+ VL ACSH GLV+E F SM Y ++ +EHYA
Sbjct: 426 HEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAA 485
Query: 308 MVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWN 367
+ DLLGRA +L+EA I M EP +VW +LL SC +H N ELAE+ + +F ++ N
Sbjct: 486 VADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSEN 545
Query: 368 AGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQI 427
G YVL+ ++YA W ++ +R M K+ L+K P CSWIE+K K + FVS + +P +
Sbjct: 546 MGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSM 605
Query: 428 EKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLINTVKGET 487
+K+ L + +M+++GY T+ V +D+DE K +L GHSE+LAVAFG+INT G T
Sbjct: 606 DKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTT 665
Query: 488 IRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
IR+TKN+R+C DCH KFISK REI+VRD +RFH F G CSCG+YW
Sbjct: 666 IRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 6/171 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + ++ + +VF R WN+ GR E L L+RQM + +
Sbjct: 286 MYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVA 345
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
++ V+ AC + L GK++H +LR G+ NI + + L+D+Y+K G I A +F
Sbjct: 346 FSSVIPACA----HLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIF 401
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 171
M + VSW+A+I +A + +A+ LF +M + PN V V+V
Sbjct: 402 DRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVK--PNQVAFVAV 450
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 132/319 (41%), Gaps = 49/319 (15%)
Query: 64 VLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAM 123
++K + + + + K++HA +R + + ++ +Y + A +F+ +
Sbjct: 7 LIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSA-SIVISIYTNLKLLHEALLLFKTL 65
Query: 124 PAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXX 183
+ ++W ++I C+ + KAL F +M A P+ SV
Sbjct: 66 KSPPVLAWKSVIRCFTDQSLFSKALASFVEM--RASGRCPDHNVFPSVLKSCTMMMDLRF 123
Query: 184 XXXVHGFILRRGLDSIMPVINALITMY----GRCGEISIG-------------------- 219
VHGFI+R G+D + NAL+ MY G +IS+G
Sbjct: 124 GESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKA 183
Query: 220 ------------ERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYI 267
RVF+ + DVVS+N++I+ Y +G + A+++ M + P
Sbjct: 184 ETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSF 243
Query: 268 SFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH----YACMVDLLGRANRLDEAIK 323
+ +VL S V +GK + Y I G++ + +VD+ ++ R++++ +
Sbjct: 244 TLSSVLPIFSEYVDVIKGK-----EIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSER 298
Query: 324 LIEDMPFEPGPTVWGSLLG 342
+ + G + W SL+
Sbjct: 299 VFSRLYCRDGIS-WNSLVA 316
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/537 (39%), Positives = 324/537 (60%), Gaps = 11/537 (2%)
Query: 6 GSLDC---ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYT 62
G DC ARKV DE E+ + W A + G E L ++ +M S + FT+
Sbjct: 98 GKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFA 157
Query: 63 YVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRA 122
VL +C+ + L GK+IH I++ Y+ +I V ++LLD+YAK G I A +F
Sbjct: 158 TVLTSCIRAS----GLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFEC 213
Query: 123 MPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXX 182
+P ++ VS +A+I YA+ + +ALE+FH++ E PN VT S+
Sbjct: 214 LPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMS--PNYVTYASLLTALSGLALLD 271
Query: 183 XXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYG 242
H +LRR L + N+LI MY +CG +S R+FD + +SWN+++ Y
Sbjct: 272 HGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYS 331
Query: 243 NNGYGKKAIQIFENMIHQG-VSPSYISFITVLCACSHAGLVEEGKILFESMLS-KYRIHP 300
+G G++ +++F M + V P ++ + VL CSH + + G +F+ M++ +Y P
Sbjct: 332 KHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKP 391
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
G EHY C+VD+LGRA R+DEA + I+ MP +P V GSLLG+CR+H + ++ E L
Sbjct: 392 GTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRL 451
Query: 361 FELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 420
E+EP NAGNYV+L+++YA A W+DV +VR +M ++ + K PG SWI+ ++ ++ F ++
Sbjct: 452 IEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHAN 511
Query: 421 EEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLI 480
+ +P+ E++ A + ++S +MK+ GY P + V YD+DE +KE++LLGHSEKLA+ FGLI
Sbjct: 512 DRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLI 571
Query: 481 NTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
T +G IR+ KNLR+C DCH F K SK RE+ +RD NRFH DG+CSCG+YW
Sbjct: 572 ATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 143/285 (50%), Gaps = 16/285 (5%)
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
Y +L AC+ L+ G+ +HA++++ Y ++ T LL Y K C+ A V
Sbjct: 55 YDALLNACLDKR----ALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVL 110
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
MP KN VSW+AMI Y++ +AL +F +M+ D PN T +V
Sbjct: 111 DEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMM--RSDGKPNEFTFATVLTSCIRASG 168
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+HG I++ DS + V ++L+ MY + G+I +F+ + DVVS ++I+
Sbjct: 169 LGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAG 228
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
Y G ++A+++F + +G+SP+Y+++ ++L A S L++ GK +L +
Sbjct: 229 YAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRE---- 284
Query: 301 GMEHYA----CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 341
+ YA ++D+ + L A +L ++MP E W ++L
Sbjct: 285 -LPFYAVLQNSLIDMYSKCGNLSYARRLFDNMP-ERTAISWNAML 327
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 96/171 (56%), Gaps = 5/171 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G + AR++F+ ER + A A +G EE LE++ +++ G+ + T
Sbjct: 197 MYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVT 256
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
Y +L A +S ++ L GK+ H ++LR + +L+D+Y+K G +SYA +F
Sbjct: 257 YASLLTA--LSGLAL--LDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLF 312
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 171
MP + ++SW+AM+ Y+K+ + + LELF M E P++VT+++V
Sbjct: 313 DNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEK-RVKPDAVTLLAV 362
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 3/127 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM-NWSGIPSDRF 59
MY + G+L AR++FD ERT WNA + G G E+LEL+R M + + D
Sbjct: 298 MYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAV 357
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
T VL C L + A +G + ++D+ + G I A
Sbjct: 358 TLLAVLSGCSHGRMEDTGLNIFDGMVAG--EYGTKPGTEHYGCIVDMLGRAGRIDEAFEF 415
Query: 120 FRAMPAK 126
+ MP+K
Sbjct: 416 IKRMPSK 422
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/537 (40%), Positives = 311/537 (57%), Gaps = 6/537 (1%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y G L+ A K+FDE +R++ W A F GR E ++L+++M G+ D +
Sbjct: 155 IYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYF 214
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
VL ACV V L G+ I + ++N V TTL+++YAK G + A SVF
Sbjct: 215 IVQVLSACV----HVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVF 270
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+M K+ V+WS MI YA N P + +ELF QM+ E P+ ++V
Sbjct: 271 DSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLK--PDQFSIVGFLSSCASLGA 328
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
I R + + + NALI MY +CG ++ G VF ++K D+V N+ IS
Sbjct: 329 LDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISG 388
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
NG+ K + +F G+SP +F+ +LC C HAGL+++G F ++ Y +
Sbjct: 389 LAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKR 448
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
+EHY CMVDL GRA LD+A +LI DMP P VWG+LL CR+ + +LAE L
Sbjct: 449 TVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKEL 508
Query: 361 FELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 420
LEPWNAGNYV L++IY+ W + VR +M K+ ++K+PG SWIE++ K++ F++
Sbjct: 509 IALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLAD 568
Query: 421 EEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLI 480
++ +P +K+ A L L EM+ G+ P T V +D++E EKER+L HSEKLAVA GLI
Sbjct: 569 DKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLI 628
Query: 481 NTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
+T G+ IR+ KNLR+C DCH K ISK REI+VRD NRFHCF +G CSC +YW
Sbjct: 629 STDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 152/315 (48%), Gaps = 7/315 (2%)
Query: 14 VFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEF 73
+F T+ I+++N+ E L+L+ + G+ FT+ VLKAC +
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRAS- 125
Query: 74 SVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSA 133
+ G ++H+ +++ G+ ++ MT+LL +Y+ G ++ A+ +F +P ++ V+W+A
Sbjct: 126 ---SRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTA 182
Query: 134 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR 193
+ Y + +A++LF +MV P+S +V V + ++
Sbjct: 183 LFSGYTTSGRHREAIDLFKKMVEMGVK--PDSYFIVQVLSACVHVGDLDSGEWIVKYMEE 240
Query: 194 RGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQI 253
+ V L+ +Y +CG++ VFD + D+V+W+++I Y +N + K+ I++
Sbjct: 241 MEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIEL 300
Query: 254 FENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 313
F M+ + + P S + L +C+ G ++ G+ S++ ++ + ++D+
Sbjct: 301 FLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGI-SLIDRHEFLTNLFMANALIDMYA 359
Query: 314 RANRLDEAIKLIEDM 328
+ + ++ ++M
Sbjct: 360 KCGAMARGFEVFKEM 374
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 124/280 (44%), Gaps = 12/280 (4%)
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
T + AC V+ K+IH +++ H + ++ LL F Y+ +F
Sbjct: 18 TLISVACTVNHL--------KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFS 69
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
N ++++I + N + + L+LF + + + T V
Sbjct: 70 HTQFPNIFLYNSLINGFVNNHLFHETLDLF--LSIRKHGLYLHGFTFPLVLKACTRASSR 127
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY 241
+H +++ G + + + +L+++Y G ++ ++FD++ + VV+W +L S Y
Sbjct: 128 KLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGY 187
Query: 242 GNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPG 301
+G ++AI +F+ M+ GV P + VL AC H G ++ G+ + + M + +
Sbjct: 188 TTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM-EEMEMQKN 246
Query: 302 MEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 341
+V+L + ++++A + + M E W +++
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMI 285
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 412 bits (1058), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/548 (38%), Positives = 327/548 (59%), Gaps = 15/548 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWS-GIPSDRF 59
MY + R+VFD +R I +WNA + +E L L+ M S G+ ++
Sbjct: 347 MYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANST 406
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
T V+ ACV S + + IH +++ G + + V TL+D+Y++ G I A +
Sbjct: 407 TMAGVVPACVRSG----AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRI 462
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQM------VLEACDSI---PNSVTMVS 170
F M ++ V+W+ MI Y ++ AL L H+M V + + PNS+T+++
Sbjct: 463 FGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMT 522
Query: 171 VXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPD 230
+ +H + ++ L + + V +AL+ MY +CG + + +VFD++ +
Sbjct: 523 ILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKN 582
Query: 231 VVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFE 290
V++WN +I YG +G G++AI + M+ QGV P+ ++FI+V ACSH+G+V+EG +F
Sbjct: 583 VITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFY 642
Query: 291 SMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPT-VWGSLLGSCRIHCN 349
M Y + P +HYAC+VDLLGRA R+ EA +L+ MP + W SLLG+ RIH N
Sbjct: 643 VMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNN 702
Query: 350 AELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIE 409
E+ E A+ L +LEP A +YVLLA+IY+ A +W VR+ M ++ ++K PGCSWIE
Sbjct: 703 LEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIE 762
Query: 410 VKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGH 469
+++ FV+ + +PQ EKL L L M+++GY P T+ V ++++E EKE +L GH
Sbjct: 763 HGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGH 822
Query: 470 SEKLAVAFGLINTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDG 529
SEKLA+AFG++NT G IR+ KNLR+C DCH TKFISK +REI++RDV RFH F++G
Sbjct: 823 SEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNG 882
Query: 530 VCSCGEYW 537
CSCG+YW
Sbjct: 883 TCSCGDYW 890
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 157/338 (46%), Gaps = 23/338 (6%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y + G KVFD ER WN+ +L + E LE +R M + FT
Sbjct: 142 LYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFT 201
Query: 61 YTYVLKACVVSEFSVYP----LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYA 116
V+ AC S P L GK++HA LR G E N ++ TL+ +Y K G ++ +
Sbjct: 202 LVSVVTAC-----SNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASS 255
Query: 117 NSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXX 176
+ + ++ V+W+ ++ +N+ ++ALE +MVLE + P+ T+ SV
Sbjct: 256 KVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE--PDEFTISSVLPACS 313
Query: 177 XXXXXXXXXXVHGFILRRG-LDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWN 235
+H + L+ G LD V +AL+ MY C ++ G RVFD + + + WN
Sbjct: 314 HLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWN 373
Query: 236 SLISMYGNNGYGKKAIQIFENMIHQ-GVSPSYISFITVLCACSHAGLVEEGKILFESMLS 294
++I+ Y N + K+A+ +F M G+ + + V+ AC V G + +
Sbjct: 374 AMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC-----VRSGAFSRKEAIH 428
Query: 295 KYRIHPGMEH----YACMVDLLGRANRLDEAIKLIEDM 328
+ + G++ ++D+ R ++D A+++ M
Sbjct: 429 GFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 154/330 (46%), Gaps = 14/330 (4%)
Query: 18 TRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYP 77
++ R+ W R+ E + Y M GI D + + +LKA +
Sbjct: 57 SQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVA----DLQD 112
Query: 78 LQKGKEIHANILRHGYE-ENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIG 136
++ GK+IHA++ + GY +++ V TL+++Y K G VF + +N VSW+++I
Sbjct: 113 MELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS 172
Query: 137 CYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX---XXXXXXVHGFILR 193
+ ALE F M+ E + P+S T+VSV VH + LR
Sbjct: 173 SLCSFEKWEMALEAFRCMLDENVE--PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR 230
Query: 194 RG-LDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQ 252
+G L+S +IN L+ MYG+ G+++ + + D+V+WN+++S N +A++
Sbjct: 231 KGELNSF--IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALE 288
Query: 253 IFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLL 312
M+ +GV P + +VL ACSH ++ GK L L + + +VD+
Sbjct: 289 YLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMY 348
Query: 313 GRANRLDEAIKLIEDMPFEPGPTVWGSLLG 342
++ ++ + M F+ +W +++
Sbjct: 349 CNCKQVLSGRRVFDGM-FDRKIGLWNAMIA 377
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/604 (37%), Positives = 342/604 (56%), Gaps = 70/604 (11%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY G + ARKVFD ++ + +A A A G EE++ + +M SGI ++ +
Sbjct: 160 MYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVS 219
Query: 61 YTYVL----------KACV--------------VSEFSVYP-------LQKGKEIHANIL 89
+ +L +A V V+ SV P L G+ IH ++
Sbjct: 220 WNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVI 279
Query: 90 RHGYEENIHVMTTLLDVYAK----FGCISYANSVFRAMPAK------------------- 126
+ G ++ V++ ++D+Y K +G IS N F M A
Sbjct: 280 KQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQ-FEMMEAGVCNAYITGLSRNGLVDKAL 338
Query: 127 -------------NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXX 173
N VSW+++I A+N ++ALELF +M + PN VT+ S+
Sbjct: 339 EMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVK--PNHVTIPSMLP 396
Query: 174 XXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVS 233
HGF +R L + V +ALI MY +CG I++ + VF+ + ++V
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVC 456
Query: 234 WNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESML 293
WNSL++ + +G K+ + IFE+++ + P +ISF ++L AC GL +EG F+ M
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMS 516
Query: 294 SKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 353
+Y I P +EHY+CMV+LLGRA +L EA LI++MPFEP VWG+LL SCR+ N +LA
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLA 576
Query: 354 ERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKK 413
E A+ LF LEP N G YVLL++IYA MW++V S+R M L+K PGCSWI+VK +
Sbjct: 577 EIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNR 636
Query: 414 IYSFVSSEEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKL 473
+Y+ ++ ++ +PQI+++ + ++S EM++ G+ P + +D++E E+E++L GHSEKL
Sbjct: 637 VYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKL 696
Query: 474 AVAFGLINTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSC 533
AV FGL+NT G +++ KNLR+C DCHA KFIS +A REI +RD NRFH F+DG+CSC
Sbjct: 697 AVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSC 756
Query: 534 GEYW 537
G++W
Sbjct: 757 GDFW 760
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 121/284 (42%), Gaps = 46/284 (16%)
Query: 80 KGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYA 139
K + HA IL+ G + + ++ L+ Y+ + C + A+ V +++P S+S++I
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 140 KNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSI 199
K + +++ +F +M IP+S + ++ +H GLD
Sbjct: 93 KAKLFTQSIGVFSRMFSHGL--IPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMD 150
Query: 200 MPVINALITMYGRCGEISIGERVFDKVKNPDV---------------------------- 231
V ++ MY RCG + +VFD++ + DV
Sbjct: 151 AFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMES 210
Query: 232 -------VSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEE 284
VSWN ++S + +GY K+A+ +F+ + H G P ++ +VL + + ++
Sbjct: 211 SGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNM 270
Query: 285 GKILFESMLSKYRIHPGMEHYAC----MVDLLGRANRLDEAIKL 324
G+ ++ Y I G+ C M+D+ G++ + I L
Sbjct: 271 GR-----LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISL 309
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 406 bits (1043), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/538 (38%), Positives = 323/538 (60%), Gaps = 6/538 (1%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y E G L +KVFD R + WN+ +A + + + L+++M S I D
Sbjct: 291 LYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPD--C 348
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHG-YEENIHVMTTLLDVYAKFGCISYANSV 119
T + A ++S+ ++ + + LR G + E+I + ++ +YAK G + A +V
Sbjct: 349 LTLISLASILSQLG--DIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAV 406
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F +P + +SW+ +I YA+N +A+E+++ M E + N T VSV
Sbjct: 407 FNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEG-EIAANQGTWVSVLPACSQAG 465
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+HG +L+ GL + V+ +L MYG+CG + +F ++ + V WN+LI+
Sbjct: 466 ALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIA 525
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
+G +G+G+KA+ +F+ M+ +GV P +I+F+T+L ACSH+GLV+EG+ FE M + Y I
Sbjct: 526 CHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGIT 585
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAM 359
P ++HY CMVD+ GRA +L+ A+K I+ M +P ++WG+LL +CR+H N +L + AS
Sbjct: 586 PSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEH 645
Query: 360 LFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVS 419
LFE+EP + G +VLL+++YA A W V +R + + L+K PG S +EV K+ F +
Sbjct: 646 LFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYT 705
Query: 420 SEEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGL 479
+ +P E++ L L ++K GY P V D+++ EKE IL+ HSE+LA+AF L
Sbjct: 706 GNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFAL 765
Query: 480 INTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
I T TIRI KNLR+C DCH+ TKFISK REI+VRD NRFH F++GVCSCG+YW
Sbjct: 766 IATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 138/281 (49%), Gaps = 14/281 (4%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQ-MNWSGIPSDRF 59
+Y LG++ AR FD + R +Y WN G E++ + M SG+ D
Sbjct: 95 LYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYR 154
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
T+ VLKAC + G +IH L+ G+ +++V +L+ +Y+++ + A +
Sbjct: 155 TFPSVLKAC-------RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARIL 207
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F MP ++ SW+AMI Y ++ +AL L + L A DS VT+VS+
Sbjct: 208 FDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNG--LRAMDS----VTVVSLLSACTEAG 261
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+H + ++ GL+S + V N LI +Y G + ++VFD++ D++SWNS+I
Sbjct: 262 DFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIK 321
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAG 280
Y N +AI +F+ M + P ++ I++ S G
Sbjct: 322 AYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 110/255 (43%), Gaps = 17/255 (6%)
Query: 78 LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGC 137
LQ K +HA ++ +N+ + L+++Y G ++ A F + ++ +W+ MI
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 138 YAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD 197
Y + + + F +L + P+ T SV +H L+ G
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSS-GLTPDYRTFPSV---LKACRTVIDGNKIHCLALKFGFM 182
Query: 198 SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM 257
+ V +LI +Y R + +FD++ D+ SWN++IS Y +G K+A+ + +
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL 242
Query: 258 IHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC----MVDLLG 313
+ ++ +++L AC+ AG G + Y I G+E ++DL
Sbjct: 243 ----RAMDSVTVVSLLSACTEAGDFNRG-----VTIHSYSIKHGLESELFVSNKLIDLYA 293
Query: 314 RANRLDEAIKLIEDM 328
RL + K+ + M
Sbjct: 294 EFGRLRDCQKVFDRM 308
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 7/142 (4%)
Query: 206 LITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFE-NMIHQGVSP 264
L+ +Y G +++ FD ++N DV +WN +IS YG G + I+ F M+ G++P
Sbjct: 92 LVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTP 151
Query: 265 SYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKL 324
Y +F +VL AC +++ KI + K+ + A ++ L R + A L
Sbjct: 152 DYRTFPSVLKACR--TVIDGNKI--HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARIL 207
Query: 325 IEDMPFEPGPTVWGSLL-GSCR 345
++MP + W +++ G C+
Sbjct: 208 FDEMPVRDMGS-WNAMISGYCQ 228
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 405 bits (1041), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/532 (37%), Positives = 316/532 (59%), Gaps = 7/532 (1%)
Query: 6 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 65
G ++ A ++F E+ W A + LA G +E +E +R+M G+ D++ + VL
Sbjct: 219 GMIEDALQLF-RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277
Query: 66 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA 125
AC + + +GK+IHA I+R ++++I+V + L+D+Y K C+ YA +VF M
Sbjct: 278 PAC----GGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQ 333
Query: 126 KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXX 185
KN VSW+AM+ Y + +A+++F M D P+ T+
Sbjct: 334 KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID--PDHYTLGQAISACANVSSLEEGS 391
Query: 186 XVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNG 245
HG + GL + V N+L+T+YG+CG+I R+F+++ D VSW +++S Y G
Sbjct: 392 QFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFG 451
Query: 246 YGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHY 305
+ IQ+F+ M+ G+ P ++ V+ ACS AGLVE+G+ F+ M S+Y I P + HY
Sbjct: 452 RAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHY 511
Query: 306 ACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEP 365
+CM+DL R+ RL+EA++ I MPF P W +LL +CR N E+ + A+ L EL+P
Sbjct: 512 SCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDP 571
Query: 366 WNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 425
+ Y LL+ IYA W V +R+ M ++ ++K PG SWI+ K K++SF + +E +P
Sbjct: 572 HHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSP 631
Query: 426 QIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLINTVKG 485
++++ A L +L+ ++ + GY P T+ VH+D++E K ++L HSE+LA+AFGLI G
Sbjct: 632 YLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSG 691
Query: 486 ETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
+ IR+ KNLR+C DCH TK IS REILVRD RFH F+DG CSCG++W
Sbjct: 692 QPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 162/391 (41%), Gaps = 73/391 (18%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM-NWSGIPSDRFT 60
Y + S AR+VFD + ++ WN A + G E+ + ++ + G+ +
Sbjct: 51 YALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLI 110
Query: 61 YTYVLKACVVSEFSVYP---------------------------LQKGKEIHANILRHGY 93
Y L V + Y + GK+IH +++ G+
Sbjct: 111 EGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGF 170
Query: 94 EENIHVMTTLLDVYAKFGCISYANSVFRAMPAKN-------------------------- 127
E + V + LL +YA GCIS A VF + +N
Sbjct: 171 ESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRG 230
Query: 128 ----SVSWSAMIGCYAKNDMPVKALELFHQMVLEAC--DSIPNSVTMVSVXXXXXXXXXX 181
SVSW+AMI A+N + +A+E F +M ++ D P SV
Sbjct: 231 MEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYP----FGSVLPACGGLGAI 286
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY 241
+H I+R + V +ALI MY +C + + VFD++K +VVSW +++ Y
Sbjct: 287 NEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGY 346
Query: 242 GNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPG 301
G G ++A++IF +M G+ P + + + AC++ +EEG S I G
Sbjct: 347 GQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG-----SQFHGKAITSG 401
Query: 302 MEHYAC----MVDLLGRANRLDEAIKLIEDM 328
+ HY +V L G+ +D++ +L +M
Sbjct: 402 LIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM 432
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 144/345 (41%), Gaps = 56/345 (16%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + L A+ VFD +++ + W A GR EE ++++ M SGI D +T
Sbjct: 314 MYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYT 373
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ AC +V L++G + H + G + V +L+ +Y K G I + +F
Sbjct: 374 LGQAISACA----NVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLF 429
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
M +++VSW+AM+ YA+ V+ ++LF +MV P+ VT+ V
Sbjct: 430 NEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLK--PDGVTLTGV--------- 478
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN-----PDVVSWN 235
I+ R G + G+R F + + P + ++
Sbjct: 479 --------------------------ISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYS 512
Query: 236 SLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSK 295
+I ++ +G ++A++ M P I + T+L AC + G +E GK ES++
Sbjct: 513 CMIDLFSRSGRLEEAMRFINGM---PFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIEL 569
Query: 296 YRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM-----PFEPGPT 335
HP Y + + + D +L M EPG +
Sbjct: 570 DPHHPA--GYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQS 612
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 131/333 (39%), Gaps = 64/333 (19%)
Query: 75 VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAM 134
Y L K + + N+ LL Y+K G IS S F +P ++ V+W+ +
Sbjct: 50 AYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVL 109
Query: 135 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 194
I Y+ + + A++ ++ M+ + ++ VT++++ +HG +++
Sbjct: 110 IEGYSLSGLVGAAVKAYNTMMRDFSANL-TRVTLMTMLKLSSSNGHVSLGKQIHGQVIKL 168
Query: 195 GLDSIMPVINALITMYGRCGEISIGERVFDKVKN-------------------------- 228
G +S + V + L+ MY G IS ++VF + +
Sbjct: 169 GFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLF 228
Query: 229 ----PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEE 284
D VSW ++I NG K+AI+ F M QG+ F +VL AC G + E
Sbjct: 229 RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINE 288
Query: 285 GKILFESMLS---KYRIHPGME-----------HYA----------------CMVDLLGR 314
GK + ++ + I+ G HYA MV G+
Sbjct: 289 GKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQ 348
Query: 315 ANRLDEAIKLIEDMP---FEPGPTVWGSLLGSC 344
R +EA+K+ DM +P G + +C
Sbjct: 349 TGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/561 (37%), Positives = 321/561 (57%), Gaps = 42/561 (7%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 70
A+ VFD ++WN R + E L LY++M S P + +T+ +LKAC
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKAC-- 125
Query: 71 SEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYA---------------------- 108
S S + ++ +IHA I + GYE +++ + +L++ YA
Sbjct: 126 SNLSAF--EETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVS 183
Query: 109 ---------KFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEAC 159
K G + A ++FR M KN++SW+ MI Y + DM +AL+LFH+M +
Sbjct: 184 WNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEM--QNS 241
Query: 160 DSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFI--LRRGLDSIMPVINALITMYGRCGEIS 217
D P++V++ + +H ++ R +DS++ + LI MY +CGE+
Sbjct: 242 DVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCV--LIDMYAKCGEME 299
Query: 218 IGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACS 277
VF +K V +W +LIS Y +G+G++AI F M G+ P+ I+F VL ACS
Sbjct: 300 EALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACS 359
Query: 278 HAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVW 337
+ GLVEEGK++F SM Y + P +EHY C+VDLLGRA LDEA + I++MP +P +W
Sbjct: 360 YTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIW 419
Query: 338 GSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKR 397
G+LL +CRIH N EL E +L ++P++ G YV A+I+A K W R+LM ++
Sbjct: 420 GALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQ 479
Query: 398 VLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDL 457
+ KVPGCS I ++ + F++ + +P+IEK+++ + +++E GY P+ + DL
Sbjct: 480 GVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDL 539
Query: 458 -DEGEKERILLGHSEKLAVAFGLINTVKGETIRITKNLRLCEDCHAFTKFISKFANREIL 516
D+ E+E I+ HSEKLA+ +GLI T G IRI KNLR+C+DCH TK ISK R+I+
Sbjct: 540 VDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIV 599
Query: 517 VRDVNRFHCFRDGVCSCGEYW 537
+RD RFH FRDG CSCG+YW
Sbjct: 600 MRDRTRFHHFRDGKCSCGDYW 620
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 132/306 (43%), Gaps = 50/306 (16%)
Query: 82 KEIHANILRHGYEENIHVMTTLLDVYAKFGCIS--------YANSVFRAMPAKNSVSWSA 133
K+IHA +L+ G ++ + +T L CIS YA VF ++ W+
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSF-----CISSTSSDFLPYAQIVFDGFDRPDTFLWNL 85
Query: 134 MIGCYAKNDMPVKALELFHQMVLEACDSIP-NSVTMVSVXXXXXXXXXXXXXXXVHGFIL 192
MI ++ +D P ++L L+ +M+ C S P N+ T S+ +H I
Sbjct: 86 MIRGFSCSDEPERSLLLYQRML---CSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQIT 142
Query: 193 RRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNG------- 245
+ G ++ + +N+LI Y G + +FD++ PD VSWNS+I Y G
Sbjct: 143 KLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALT 202
Query: 246 ------------------------YGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGL 281
K+A+Q+F M + V P +S L AC+ G
Sbjct: 203 LFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGA 262
Query: 282 VEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 341
+E+GK + S L+K RI ++D+ + ++EA+++ +++ + W +L+
Sbjct: 263 LEQGKWI-HSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK-KKSVQAWTALI 320
Query: 342 GSCRIH 347
H
Sbjct: 321 SGYAYH 326
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 6/137 (4%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G ++ A +VF +++++ W A A G G E + + +M GI + T
Sbjct: 291 MYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVIT 350
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILR-HGYEENIHVMTTLLDVYAKFGCISYANSV 119
+T VL AC + +++GK I ++ R + + I ++D+ + G + A
Sbjct: 351 FTAVLTACSYTGL----VEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRF 406
Query: 120 FRAMPAK-NSVSWSAMI 135
+ MP K N+V W A++
Sbjct: 407 IQEMPLKPNAVIWGALL 423
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/540 (40%), Positives = 318/540 (58%), Gaps = 13/540 (2%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y + GSL A++VF R +T+ WNA A L+ + QM SG+ D FT
Sbjct: 440 YAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTV 499
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
+L AC + L+ GKE+H I+R+ E ++ V ++L +Y G + ++F
Sbjct: 500 CSLLSACS----KLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFD 555
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVL---EACDSIPNSVTMVSVXXXXXXX 178
AM K+ VSW+ +I Y +N P +AL +F QMVL + C ++M+ V
Sbjct: 556 AMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLC-----GISMMPVFGACSLL 610
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
H + L+ L+ + +LI MY + G I+ +VF+ +K SWN++I
Sbjct: 611 PSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMI 670
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 298
YG +G K+AI++FE M G +P ++F+ VL AC+H+GL+ EG + M S + +
Sbjct: 671 MGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGL 730
Query: 299 HPGMEHYACMVDLLGRANRLDEAIKLI-EDMPFEPGPTVWGSLLGSCRIHCNAELAERAS 357
P ++HYAC++D+LGRA +LD+A++++ E+M E +W SLL SCRIH N E+ E+ +
Sbjct: 731 KPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVA 790
Query: 358 AMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSF 417
A LFELEP NYVLL+++YA W DV+ VR+ M + L+K GCSWIE+ +K++SF
Sbjct: 791 AKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSF 850
Query: 418 VSSEEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAF 477
V E E++++L L ++ + GY P T V +DL E EK L GHSEKLA+ +
Sbjct: 851 VVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTY 910
Query: 478 GLINTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
GLI T +G TIR+ KNLR+C DCH K ISK REI+VRD RFH F++GVCSCG+YW
Sbjct: 911 GLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 143/294 (48%), Gaps = 11/294 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM-NWSGIPSDRF 59
MY GS D +R VFD R + ++ WNA + + +E+LE + +M + + + D F
Sbjct: 129 MYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHF 188
Query: 60 TYTYVLKACV-VSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANS 118
TY V+KAC +S+ + G +H +++ G E++ V L+ Y G ++ A
Sbjct: 189 TYPCVIKACAGMSDVGI-----GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQ 243
Query: 119 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDS--IPNSVTMVSVXXXXX 176
+F MP +N VSW++MI ++ N ++ L +M+ E D +P+ T+V+V
Sbjct: 244 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 303
Query: 177 XXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNS 236
VHG+ ++ LD + + NAL+ MY +CG I+ + +F N +VVSWN+
Sbjct: 304 REREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNT 363
Query: 237 LISMYGNNGYGKKAIQIFENMIHQG--VSPSYISFITVLCACSHAGLVEEGKIL 288
++ + G + M+ G V ++ + + C H + K L
Sbjct: 364 MVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKEL 417
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 127/289 (43%), Gaps = 8/289 (2%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM---NWSG-IPSD 57
Y G + A ++FD ER + WN+ R + G EE L +M N G D
Sbjct: 232 YGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPD 291
Query: 58 RFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYAN 117
T VL C + GK +H ++ ++ + + L+D+Y+K GCI+ A
Sbjct: 292 VATLVTVLPVCARER----EIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQ 347
Query: 118 SVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXX 177
+F+ KN VSW+ M+G ++ ++ QM+ D + VT+++
Sbjct: 348 MIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
Query: 178 XXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSL 237
+H + L++ V NA + Y +CG +S +RVF +++ V SWN+L
Sbjct: 408 ESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNAL 467
Query: 238 ISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGK 286
I + + + ++ M G+ P + ++L ACS + GK
Sbjct: 468 IGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGK 516
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 108/214 (50%), Gaps = 6/214 (2%)
Query: 78 LQKGKEIHANILRHGYEENIHVM-TTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIG 136
++ G++IH + N V+ T ++ +YA G + VF A+ +KN W+A+I
Sbjct: 100 IEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVIS 159
Query: 137 CYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGL 196
Y++N++ + LE F +M+ D +P+ T V VHG +++ GL
Sbjct: 160 SYSRNELYDEVLETFIEMI-STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGL 218
Query: 197 DSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFEN 256
+ V NAL++ YG G ++ ++FD + ++VSWNS+I ++ +NG+ +++ +
Sbjct: 219 VEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGE 278
Query: 257 MIHQ----GVSPSYISFITVLCACSHAGLVEEGK 286
M+ + P + +TVL C+ + GK
Sbjct: 279 MMEENGDGAFMPDVATLVTVLPVCAREREIGLGK 312
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 127/274 (46%), Gaps = 37/274 (13%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y G L + +FD ++++ WN G + L ++RQM GI +
Sbjct: 540 LYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGIS 599
Query: 61 YTYVLKACVVSEFSVYP-LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
V AC S+ P L+ G+E HA L+H E++ + +L+D+YAK G I+ ++ V
Sbjct: 600 MMPVFGAC-----SLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKV 654
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F + K++ SW+AMI Y + + +A++LF +M + P+ +T + V
Sbjct: 655 FNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEM--QRTGHNPDDLTFLGVLTACN--- 709
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINA------------LITMYGRCGEISIGERVF--DK 225
H ++ GL + + ++ +I M GR G++ RV +
Sbjct: 710 --------HSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEM 761
Query: 226 VKNPDVVSWNSLIS---MYGNNGYGKK-AIQIFE 255
+ DV W SL+S ++ N G+K A ++FE
Sbjct: 762 SEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFE 795
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/537 (39%), Positives = 312/537 (58%), Gaps = 9/537 (1%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y + G + +F E R+ I +NA G E L L++++ SG R
Sbjct: 265 LYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGA---RLR 321
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ ++ VS L IH L+ + + V T L VY+K I A +F
Sbjct: 322 SSTLVSLVPVSGH----LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLF 377
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
P K+ SW+AMI Y +N + A+ LF +M + + PN VT+ +
Sbjct: 378 DESPEKSLPSWNAMISGYTQNGLTEDAISLFREM--QKSEFSPNPVTITCILSACAQLGA 435
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
VH + +S + V ALI MY +CG I+ R+FD + + V+WN++IS
Sbjct: 436 LSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISG 495
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
YG +G G++A+ IF M++ G++P+ ++F+ VL ACSHAGLV+EG +F SM+ +Y P
Sbjct: 496 YGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEP 555
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
++HYACMVD+LGRA L A++ IE M EPG +VW +LLG+CRIH + LA S L
Sbjct: 556 SVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKL 615
Query: 361 FELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 420
FEL+P N G +VLL++I++ + + +VR+ KR L K PG + IE+ + + F S
Sbjct: 616 FELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSG 675
Query: 421 EEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLI 480
++ +PQ++++ L KL +M+E GY P+T + +D++E E+E ++ HSE+LA+AFGLI
Sbjct: 676 DQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLI 735
Query: 481 NTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
T G IRI KNLR+C DCH TK ISK R I+VRD NRFH F+DGVCSCG+YW
Sbjct: 736 ATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 174/364 (47%), Gaps = 18/364 (4%)
Query: 4 ELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWS-GIPSDRFTYT 62
+LG++ AR +F + ++++N R ++ L ++ + S + + TY
Sbjct: 64 DLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYA 123
Query: 63 YVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRA 122
+ + A S F + G+ IH + G + + + + ++ +Y KF + A VF
Sbjct: 124 FAISAA--SGFR--DDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDR 179
Query: 123 MPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXX 182
MP K+++ W+ MI Y KN+M V+++++F ++ E+C + ++ T++ +
Sbjct: 180 MPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL-DTTTLLDILPAVAELQELR 238
Query: 183 XXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYG 242
+H + G S V+ I++Y +CG+I +G +F + + PD+V++N++I Y
Sbjct: 239 LGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYT 298
Query: 243 NNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVE--EGKILFESMLSKYRIHP 300
+NG + ++ +F+ ++ G + ++++ H L+ G L + LS +
Sbjct: 299 SNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVS- 357
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
+ + + N ++ A KL ++ P + P+ W +++ + L E A ++
Sbjct: 358 -----TALTTVYSKLNEIESARKLFDESPEKSLPS-WNAMISG---YTQNGLTEDAISLF 408
Query: 361 FELE 364
E++
Sbjct: 409 REMQ 412
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 160/354 (45%), Gaps = 12/354 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM-NWSGIPSDRF 59
MY + ++ ARKVFD E+ +WN E ++++R + N S D
Sbjct: 163 MYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTT 222
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
T +L A V+E L+ G +IH+ + G + +V+T + +Y+K G I +++
Sbjct: 223 TLLDILPA--VAELQ--ELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSAL 278
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
FR + V+++AMI Y N +L LF +++L S T+VS+
Sbjct: 279 FREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAR--LRSSTLVSL---VPVSG 333
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+HG+ L+ S V AL T+Y + EI ++FD+ + SWN++IS
Sbjct: 334 HLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMIS 393
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
Y NG + AI +F M SP+ ++ +L AC+ G + GK + + ++
Sbjct: 394 GYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHD-LVRSTDFE 452
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 353
+ ++ + + + EA +L D+ + W +++ +H + A
Sbjct: 453 SSIYVSTALIGMYAKCGSIAEARRLF-DLMTKKNEVTWNTMISGYGLHGQGQEA 505
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 88/178 (49%), Gaps = 1/178 (0%)
Query: 83 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKND 142
+ HA I+ HG+ +I ++T L + G I YA +F ++ + ++ ++ ++ N+
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 143 MPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPV 202
P +L +F + ++ D PNS T +HG + G DS + +
Sbjct: 98 SPHSSLSVFAHL-RKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLL 156
Query: 203 INALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQ 260
+ ++ MY + + +VFD++ D + WN++IS Y N ++IQ+F ++I++
Sbjct: 157 GSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINE 214
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/536 (38%), Positives = 319/536 (59%), Gaps = 14/536 (2%)
Query: 8 LDCARKVFDETRERTIY---IWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYV 64
LD ARK+FD+ + ++ +W A + G + L +Y M S I F+ +
Sbjct: 183 LDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVA 242
Query: 65 LKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP 124
LKACV + L+ G+ IHA I++ + + V LL +Y + G A VF M
Sbjct: 243 LKACV----DLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMS 298
Query: 125 AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXX 184
+N V+W+++I +K + LF +M E + T+ ++
Sbjct: 299 ERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGF--SWATLTTILPACSRVAALLTG 356
Query: 185 XXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNN 244
+H IL+ +P++N+L+ MYG+CGE+ RVFD + D+ SWN +++ Y N
Sbjct: 357 KEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAIN 416
Query: 245 GYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 304
G ++ I +FE MI GV+P I+F+ +L CS GL E G LFE M +++R+ P +EH
Sbjct: 417 GNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEH 476
Query: 305 YACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELE 364
YAC+VD+LGRA ++ EA+K+IE MPF+P ++WGSLL SCR+H N + E A+ LF LE
Sbjct: 477 YACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLE 536
Query: 365 PWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS---E 421
P N GNYV++++IYA+AKMW +V +R++M +R ++K GCSW++VK KI FV+ E
Sbjct: 537 PHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYE 596
Query: 422 EDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLIN 481
N ++ + + +L +++ GY+P T++V +D+DE K + GHSE+LA + LI+
Sbjct: 597 FRNS--DEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIH 654
Query: 482 TVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
T +G IRITKNLR+C DCH++ K +S+ R I++RD RFH F DG+CSC +YW
Sbjct: 655 TGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 145/333 (43%), Gaps = 51/333 (15%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y E G D ARKVFD ER + WN+ L+ R E+ L+R+M I T
Sbjct: 280 LYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWAT 339
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
T +L AC V L GKEIHA IL+ + ++ ++ +L+D+Y K G + Y+ VF
Sbjct: 340 LTTILPACS----RVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVF 395
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
M K+ SW+ M+ CYA N + + LF M+ P+ +T V
Sbjct: 396 DVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGV--APDGITFV----------- 442
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK-----NPDVVSWN 235
AL++ G G +F+++K +P + +
Sbjct: 443 ------------------------ALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYA 478
Query: 236 SLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSK 295
L+ + G G K+A+++ E M + PS + ++L +C G V G+I + +
Sbjct: 479 CLVDILGRAGKIKEAVKVIETMPFK---PSASIWGSLLNSCRLHGNVSVGEIAAKELFVL 535
Query: 296 YRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 328
+PG +Y + ++ A D K+ E M
Sbjct: 536 EPHNPG--NYVMVSNIYADAKMWDNVDKIREMM 566
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 401 bits (1030), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/514 (40%), Positives = 301/514 (58%), Gaps = 12/514 (2%)
Query: 26 WNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIH 85
W A EE ++L+ +M G+ + FTY+ +L A P+ E+H
Sbjct: 365 WTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA--------LPVISPSEVH 416
Query: 86 ANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPV 145
A +++ YE + V T LLD Y K G + A VF + K+ V+WSAM+ YA+
Sbjct: 417 AQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETE 476
Query: 146 KALELFHQMVLEACDSIPNSVTMVSVXXX-XXXXXXXXXXXXVHGFILRRGLDSIMPVIN 204
A+++F ++ PN T S+ HGF ++ LDS + V +
Sbjct: 477 AAIKMFGELTKGGIK--PNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSS 534
Query: 205 ALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSP 264
AL+TMY + G I E VF + + D+VSWNS+IS Y +G KA+ +F+ M + V
Sbjct: 535 ALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKM 594
Query: 265 SYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKL 324
++FI V AC+HAGLVEEG+ F+ M+ +I P EH +CMVDL RA +L++A+K+
Sbjct: 595 DGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKV 654
Query: 325 IEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMW 384
IE+MP G T+W ++L +CR+H EL A+ + ++P ++ YVLL+++YAE+ W
Sbjct: 655 IENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDW 714
Query: 385 SDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKEQ 444
+ VRKLM +R ++K PG SWIEVK K YSF++ + +P +++ L LST +K+
Sbjct: 715 QERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDL 774
Query: 445 GYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLINTVKGETIRITKNLRLCEDCHAFT 504
GY P T+ V D+D+ KE +L HSE+LA+AFGLI T KG + I KNLR+C DCH
Sbjct: 775 GYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVI 834
Query: 505 KFISKFANREILVRDVNRFHCF-RDGVCSCGEYW 537
K I+K REI+VRD NRFH F DGVCSCG++W
Sbjct: 835 KLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 134/270 (49%), Gaps = 10/270 (3%)
Query: 11 ARKVFDET--RERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKAC 68
A +FD++ R+R YI + + GR +E L+ ++ G+ D ++ VLK
Sbjct: 46 AHNLFDKSPGRDRESYI--SLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVS 103
Query: 69 VVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNS 128
++ G+++H ++ G+ +++ V T+L+D Y K VF M +N
Sbjct: 104 ATLCDELF----GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNV 159
Query: 129 VSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVH 188
V+W+ +I YA+N M + L LF +M E PNS T + VH
Sbjct: 160 VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQ--PNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 189 GFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGK 248
+++ GLD +PV N+LI +Y +CG + +FDK + VV+WNS+IS Y NG
Sbjct: 218 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 277
Query: 249 KAIQIFENMIHQGVSPSYISFITVLCACSH 278
+A+ +F +M V S SF +V+ C++
Sbjct: 278 EALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 169/353 (47%), Gaps = 16/353 (4%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y + G++ AR +FD+T +++ WN+ A G E L ++ M + + +
Sbjct: 238 LYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESS 297
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ V+K C ++ L+ +++H +++++G+ + ++ T L+ Y+K + A +F
Sbjct: 298 FASVIKLCA----NLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLF 353
Query: 121 RAMP-AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
+ + N VSW+AMI + +ND +A++LF +M + PN T +
Sbjct: 354 KEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVR--PNEFTYSVI----LTAL 407
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
VH +++ + V AL+ Y + G++ +VF + + D+V+W+++++
Sbjct: 408 PVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLA 467
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVL--CACSHAGLVEEGKILFESMLSKYR 297
Y G + AI++F + G+ P+ +F ++L CA ++A + +GK F K R
Sbjct: 468 GYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASM-GQGK-QFHGFAIKSR 525
Query: 298 IHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNA 350
+ + + ++ + + ++ A ++ + E W S++ H A
Sbjct: 526 LDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYAQHGQA 577
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 109/231 (47%), Gaps = 10/231 (4%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y +LG ++ A KVF ++ I W+A A G E ++++ ++ GI + FT+
Sbjct: 438 YVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTF 497
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
+ +L C + S + +GK+ H ++ + ++ V + LL +YAK G I A VF+
Sbjct: 498 SSILNVCAATNAS---MGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFK 554
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
K+ VSW++MI YA++ +KAL++F +M + VT + V
Sbjct: 555 RQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKM--DGVTFIGVFAACTHAGLV 612
Query: 182 XXXXXVHGFILRRGLDSIMPVI---NALITMYGRCGEISIGERVFDKVKNP 229
++R I P + ++ +Y R G++ +V + + NP
Sbjct: 613 EEGEKYFDIMVRDC--KIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNP 661
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 85/184 (46%), Gaps = 13/184 (7%)
Query: 110 FGCISY-----ANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELF---HQMVLEACDS 161
FG +S A+++F P ++ S+ +++ ++++ +A LF H++ +E S
Sbjct: 35 FGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCS 94
Query: 162 IPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGER 221
I +SV VS +H ++ G + V +L+ Y + G +
Sbjct: 95 IFSSVLKVSATLCDELFGRQ-----LHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRK 149
Query: 222 VFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGL 281
VFD++K +VV+W +LIS Y N + + +F M ++G P+ +F L + G+
Sbjct: 150 VFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGV 209
Query: 282 VEEG 285
G
Sbjct: 210 GGRG 213
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 400 bits (1027), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/542 (40%), Positives = 310/542 (57%), Gaps = 44/542 (8%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G L AR V DE R + WN+ A R ++ LE+ R+M I D T
Sbjct: 184 MYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGT 243
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+L A + + EN+ Y +F
Sbjct: 244 MASLLPA---------------------VSNTTTENVM----------------YVKDMF 266
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
M K+ VSW+ MIG Y KN MPV+A+EL+ +M EA P++V++ SV
Sbjct: 267 FKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRM--EADGFEPDAVSITSVLPACGDTSA 324
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+HG+I R+ L + + NALI MY +CG + VF+ +K+ DVVSW ++IS
Sbjct: 325 LSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISA 384
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
YG +G G A+ +F + G+ P I+F+T L ACSHAGL+EEG+ F+ M Y+I P
Sbjct: 385 YGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITP 444
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
+EH ACMVDLLGRA ++ EA + I+DM EP VWG+LLG+CR+H + ++ A+ L
Sbjct: 445 RLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKL 504
Query: 361 FELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 420
F+L P +G YVLL++IYA+A W +V ++R +M + L+K PG S +EV + I++F+
Sbjct: 505 FQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVG 564
Query: 421 EEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLI 480
+ +PQ +++ L L +MKE GY P + +D++E +KE L HSEKLA+ F L+
Sbjct: 565 DRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALM 624
Query: 481 NTVKGE-----TIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGE 535
NT + E TIRITKNLR+C DCH K IS+ +REI++RD NRFH FR GVCSCG+
Sbjct: 625 NTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGD 684
Query: 536 YW 537
YW
Sbjct: 685 YW 686
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 118/276 (42%), Gaps = 9/276 (3%)
Query: 73 FSVYP-LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSW 131
YP ++ + +H+ I+ N + L+ YA ++ A VF +P +N +
Sbjct: 49 LDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIII 108
Query: 132 SAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFI 191
+ MI Y N + +++F M C+ P+ T V +HG
Sbjct: 109 NVMIRSYVNNGFYGEGVKVFGTMC--GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSA 166
Query: 192 LRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAI 251
+ GL S + V N L++MYG+CG +S V D++ DVVSWNSL+ Y N A+
Sbjct: 167 TKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDAL 226
Query: 252 QIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDL 311
++ M +S + ++L A S+ E + + M K + + M+ +
Sbjct: 227 EVCREMESVKISHDAGTMASLLPAVSNT--TTENVMYVKDMFFKMG-KKSLVSWNVMIGV 283
Query: 312 LGRANRLDEAIKLIEDMP---FEPGPTVWGSLLGSC 344
+ EA++L M FEP S+L +C
Sbjct: 284 YMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/539 (37%), Positives = 326/539 (60%), Gaps = 9/539 (1%)
Query: 1 MYHELGSLDCARKVFD--ETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDR 58
+Y + L AR VF+ ERTI W A A A G E LE++ QM + D
Sbjct: 163 LYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDW 222
Query: 59 FTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANS 118
VL A + L++G+ IHA++++ G E ++ +L +YAK G ++ A
Sbjct: 223 VALVSVLNAFTC----LQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKI 278
Query: 119 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
+F M + N + W+AMI YAKN +A+++FH+M+ + D P+++++ S
Sbjct: 279 LFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINK--DVRPDTISITSAISACAQV 336
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
++ ++ R + + +ALI M+ +CG + VFD+ + DVV W+++I
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 298
YG +G ++AI ++ M GV P+ ++F+ +L AC+H+G+V EG F M + ++I
Sbjct: 397 VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKI 455
Query: 299 HPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASA 358
+P +HYAC++DLLGRA LD+A ++I+ MP +PG TVWG+LL +C+ H + EL E A+
Sbjct: 456 NPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQ 515
Query: 359 MLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFV 418
LF ++P N G+YV L+++YA A++W V VR M ++ L K GCSW+EV+ ++ +F
Sbjct: 516 QLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFR 575
Query: 419 SSEEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFG 478
++ +P+ E++ + + + +KE G+ + +DL++ E E L HSE++A+A+G
Sbjct: 576 VGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYG 635
Query: 479 LINTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
LI+T +G +RITKNLR C +CHA TK ISK +REI+VRD NRFH F+DGVCSCG+YW
Sbjct: 636 LISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 190/352 (53%), Gaps = 12/352 (3%)
Query: 5 LGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYV 64
G + AR+VFD+ I+ WNA R + ++ L +Y M + + D FT+ ++
Sbjct: 66 FGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHL 125
Query: 65 LKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRA-- 122
LKAC + LQ G+ +HA + R G++ ++ V L+ +YAK + A +VF
Sbjct: 126 LKACS----GLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLP 181
Query: 123 MPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXX 182
+P + VSW+A++ YA+N P++ALE+F QM D P+ V +VSV
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPMEALEIFSQM--RKMDVKPDWVALVSVLNAFTCLQDLK 239
Query: 183 XXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYG 242
+H +++ GL+ ++ +L TMY +CG+++ + +FDK+K+P+++ WN++IS Y
Sbjct: 240 QGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYA 299
Query: 243 NNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESM-LSKYRIHPG 301
NGY ++AI +F MI++ V P IS + + AC+ G +E+ + ++E + S YR
Sbjct: 300 KNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVF 359
Query: 302 MEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 353
+ + ++D+ + + E +L+ D + VW +++ +H A A
Sbjct: 360 IS--SALIDMFAKCGSV-EGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREA 408
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 119/244 (48%), Gaps = 12/244 (4%)
Query: 52 SGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFG 111
SGI SD F + + A ++ K+IHA +L G + + ++T L+ + FG
Sbjct: 16 SGIHSDSFYASLIDSATHKAQL--------KQIHARLLVLGLQFSGFLITKLIHASSSFG 67
Query: 112 CISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 171
I++A VF +P W+A+I Y++N+ AL ++ M L P+S T +
Sbjct: 68 DITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS--PDSFTFPHL 125
Query: 172 XXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPD- 230
VH + R G D+ + V N LI +Y +C + VF+ + P+
Sbjct: 126 LKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER 185
Query: 231 -VVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILF 289
+VSW +++S Y NG +A++IF M V P +++ ++VL A + +++G+ +
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 290 ESML 293
S++
Sbjct: 246 ASVV 249
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 76/161 (47%), Gaps = 8/161 (4%)
Query: 187 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 246
+H +L GL +I LI G+I+ +VFD + P + WN++I Y N +
Sbjct: 40 IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNH 99
Query: 247 GKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA 306
+ A+ ++ NM VSP +F +L ACS ++ G+ + + +R+ + +
Sbjct: 100 FQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQV---FRLGFDADVFV 156
Query: 307 --CMVDLLGRANRLDEAIKLIEDMPFEPGPTV--WGSLLGS 343
++ L + RL A + E +P P T+ W +++ +
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPL-PERTIVSWTAIVSA 196
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/530 (37%), Positives = 329/530 (62%), Gaps = 9/530 (1%)
Query: 11 ARKVFDETRER-TIYIWNAFFRALAMVGRGEELLELYRQMNWSG-IPSDRFTYTYVLKAC 68
A KVF + + ++IWN R A +G LYR+M SG + D TY +++KA
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 69 VVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNS 128
++ ++ G+ IH+ ++R G+ I+V +LL +YA G ++ A VF MP K+
Sbjct: 132 T----TMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDL 187
Query: 129 VSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVH 188
V+W+++I +A+N P +AL L+ +M + P+ T+VS+ VH
Sbjct: 188 VAWNSVINGFAENGKPEEALALYTEMNSKGIK--PDGFTIVSLLSACAKIGALTLGKRVH 245
Query: 189 GFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGK 248
++++ GL + N L+ +Y RCG + + +FD++ + + VSW SLI NG+GK
Sbjct: 246 VYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGK 305
Query: 249 KAIQIFENM-IHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC 307
+AI++F+ M +G+ P I+F+ +L ACSH G+V+EG F M +Y+I P +EH+ C
Sbjct: 306 EAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGC 365
Query: 308 MVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWN 367
MVDLL RA ++ +A + I+ MP +P +W +LLG+C +H +++LAE A + +LEP +
Sbjct: 366 MVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNH 425
Query: 368 AGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQI 427
+G+YVLL+++YA + WSDV+ +RK M + ++KVPG S +EV +++ F+ ++ +PQ
Sbjct: 426 SGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQS 485
Query: 428 EKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLINTVKGET 487
+ + A L +++ ++ +GY PQ + V+ D++E EKE ++ HSEK+A+AF LI+T +
Sbjct: 486 DAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSP 545
Query: 488 IRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
I + KNLR+C DCH K +SK NREI+VRD +RFH F++G CSC +YW
Sbjct: 546 ITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 139/279 (49%), Gaps = 10/279 (3%)
Query: 69 VVSEFSVYPLQKGKEIHANILRHGY-----EENIHVMTTLLDVYAKFGCISYANSVFRAM 123
++ + V + K ++IHA +RHG E H++ L+ + + +SYA+ VF +
Sbjct: 21 LLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSP-PPMSYAHKVFSKI 79
Query: 124 PAK-NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXX 182
N W+ +I YA+ + A L+ +M + P++ T +
Sbjct: 80 EKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVE-PDTHTYPFLIKAVTTMADVR 138
Query: 183 XXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYG 242
+H ++R G S++ V N+L+ +Y CG+++ +VFDK+ D+V+WNS+I+ +
Sbjct: 139 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 198
Query: 243 NNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGM 302
NG ++A+ ++ M +G+ P + +++L AC+ G + GK + M+ K + +
Sbjct: 199 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI-KVGLTRNL 257
Query: 303 EHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 341
++DL R R++EA L ++M + W SL+
Sbjct: 258 HSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 295
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 134/276 (48%), Gaps = 41/276 (14%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y G + A KVFD+ E+ + WN+ A G+ EE L LY +MN GI D FT
Sbjct: 165 LYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFT 224
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+L AC + L GK +H +++ G N+H LLD+YA+ G + A ++F
Sbjct: 225 IVSLLSACA----KIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLF 280
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDS-IPNSVTMVSVXXXXXXXX 179
M KNSVSW+++I A N +A+ELF M E+ + +P +T V +
Sbjct: 281 DEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM--ESTEGLLPCEITFVGILYACS--- 335
Query: 180 XXXXXXXVHGFILRRGLD---------SIMPVI---NALITMYGRCGEISIGERVFDKVK 227
H +++ G + I P I ++ + R G++ ++ ++ +K
Sbjct: 336 --------HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV---KKAYEYIK 384
Query: 228 N----PDVVSWNSLI---SMYGNNGYGKKA-IQIFE 255
+ P+VV W +L+ +++G++ + A IQI +
Sbjct: 385 SMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQ 420
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 399 bits (1025), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/544 (37%), Positives = 319/544 (58%), Gaps = 30/544 (5%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y + G +D AR++FDE+ + ++ W A EE EL+ +M + ++
Sbjct: 260 YAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSW 315
Query: 62 TYVLKACVVSE--------FSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCI 113
+L V E F V P + N+ T++ YA+ G I
Sbjct: 316 NAMLAGYVQGERMEMAKELFDVMPCR----------------NVSTWNTMITGYAQCGKI 359
Query: 114 SYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXX 173
S A ++F MP ++ VSW+AMI Y+++ +AL LF QM E N + S
Sbjct: 360 SEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREG--GRLNRSSFSSALS 417
Query: 174 XXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVS 233
+HG +++ G ++ V NAL+ MY +CG I +F ++ D+VS
Sbjct: 418 TCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVS 477
Query: 234 WNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESML 293
WN++I+ Y +G+G+ A++ FE+M +G+ P + + VL ACSH GLV++G+ F +M
Sbjct: 478 WNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMT 537
Query: 294 SKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 353
Y + P +HYACMVDLLGRA L++A L+++MPFEP +WG+LLG+ R+H N ELA
Sbjct: 538 QDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELA 597
Query: 354 ERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKK 413
E A+ +F +EP N+G YVLL+++YA + W DV +R M + ++KVPG SWIE++ K
Sbjct: 598 ETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNK 657
Query: 414 IYSFVSSEEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKL 473
++F +E +P+ +++ A L +L MK+ GY +T++V +D++E EKER++ HSE+L
Sbjct: 658 THTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERL 717
Query: 474 AVAFGLINTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSC 533
AVA+G++ G IR+ KNLR+CEDCH K++++ R I++RD NRFH F+DG CSC
Sbjct: 718 AVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSC 777
Query: 534 GEYW 537
G+YW
Sbjct: 778 GDYW 781
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 155/365 (42%), Gaps = 46/365 (12%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR-QMNWSGIPSDRFT 60
Y + G +D AR VFD E+ WNA A + EE L++ + NW+ + +
Sbjct: 167 YAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLL 226
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+V K +V + +++ + T++ YA+ G I A +F
Sbjct: 227 GGFVKKKKIVEARQFFDSMNVRDVVS-------------WNTIITGYAQSGKIDEARQLF 273
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
P ++ +W+AM+ Y +N M +A ELF +M N V+ ++
Sbjct: 274 DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER------NEVSWNAMLAGYVQGER 327
Query: 181 XXXXXXVHGFILRRGLDSIMP-----VINALITMYGRCGEISIGERVFDKVKNPDVVSWN 235
+ + L +MP N +IT Y +CG+IS + +FDK+ D VSW
Sbjct: 328 ME---------MAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWA 378
Query: 236 SLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSK 295
++I+ Y +G+ +A+++F M +G + SF + L C+ +E GK L
Sbjct: 379 AMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHG----- 433
Query: 296 YRIHPGMEHYACMVD-----LLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNA 350
R+ G C V + + ++EA L ++M + W +++ H
Sbjct: 434 -RLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKD-IVSWNTMIAGYSRHGFG 491
Query: 351 ELAER 355
E+A R
Sbjct: 492 EVALR 496
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 133/344 (38%), Gaps = 69/344 (20%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAM---VGRGEELLELYRQMNWSGIPSDR 58
Y G + ARK+FDE ER + WN + +G+ EL E+ +P
Sbjct: 105 YLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEI--------MP--- 153
Query: 59 FTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANS 118
E ++ T+L YA+ GC+ A S
Sbjct: 154 -----------------------------------ERDVCSWNTMLSGYAQNGCVDDARS 178
Query: 119 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
VF MP KN VSW+A++ Y +N +A LF + +VS
Sbjct: 179 VFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSR---------ENWALVSWNCLLGGF 229
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
F + ++ N +IT Y + G+I ++FD+ DV +W +++
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVS-WNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMV 288
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 298
S Y N ++A ++F+ M + + +S+ +L +E K LF+ M +
Sbjct: 289 SGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCR--- 341
Query: 299 HPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLG 342
+ + M+ + ++ EA L + MP + P W +++
Sbjct: 342 --NVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIA 382
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 139/347 (40%), Gaps = 78/347 (22%)
Query: 94 EENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQ 153
+ +I + Y + G + A VF+ MP +SVS++ MI Y +N A +LF
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLF-- 118
Query: 154 MVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDS------IMP-----V 202
D +P +VS + G++ R L IMP
Sbjct: 119 ------DEMPER-DLVS------------WNVMIKGYVRNRNLGKARELFEIMPERDVCS 159
Query: 203 INALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNN------------------ 244
N +++ Y + G + VFD++ + VSWN+L+S Y N
Sbjct: 160 WNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL 219
Query: 245 --------GYGKK-----AIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFES 291
G+ KK A Q F++M + V +S+ T++ + +G ++E + LF+
Sbjct: 220 VSWNCLLGGFVKKKKIVEARQFFDSMNVRDV----VSWNTIITGYAQSGKIDEARQLFDE 275
Query: 292 MLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAE 351
+ + + MV + ++EA +L + MP E W ++L + E
Sbjct: 276 SPVQ-----DVFTWTAMVSGYIQNRMVEEARELFDKMP-ERNEVSWNAMLAG---YVQGE 326
Query: 352 LAERASAMLFELEP-WNAGNYVLLADIYAEAKMWSDVKSVRKLMGKR 397
E A LF++ P N + + YA+ S+ K++ M KR
Sbjct: 327 RMEMAKE-LFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR 372
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 398 bits (1023), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/537 (38%), Positives = 313/537 (58%), Gaps = 11/537 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + L+ A ++FD+ +R + W A + ++ LEL M + + +T
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
Y+ VL++C + + +H I++ G E ++ V + L+DV+AK G A SVF
Sbjct: 165 YSSVLRSC-------NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVF 217
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
M +++ W+++IG +A+N ALELF +M + I T+ SV
Sbjct: 218 DEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRM--KRAGFIAEQATLTSVLRACTGLAL 275
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
H I++ D I+ NAL+ MY +CG + RVF+++K DV++W+++IS
Sbjct: 276 LELGMQAHVHIVKYDQDLILN--NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISG 333
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
NGY ++A+++FE M G P+YI+ + VL ACSHAGL+E+G F SM Y I P
Sbjct: 334 LAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDP 393
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
EHY CM+DLLG+A +LD+A+KL+ +M EP W +LLG+CR+ N LAE A+ +
Sbjct: 394 VREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKV 453
Query: 361 FELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 420
L+P +AG Y LL++IYA ++ W V+ +R M R ++K PGCSWIEV K+I++F+
Sbjct: 454 IALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIG 513
Query: 421 EEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLI 480
+ +PQI ++ L +L + GY P+TN V DL+ + E L HSEKLA+AFGL+
Sbjct: 514 DNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLM 573
Query: 481 NTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
+ IRI KNLR+C DCH F K SK R I++RD R+H F+DG CSCG+YW
Sbjct: 574 TLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 164/343 (47%), Gaps = 21/343 (6%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
++ + +L C+ D+T + + + R L + + L+ + G+ +D T
Sbjct: 10 LFRPVVTLRCSYSSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSH------GLWADSAT 63
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
Y+ ++K C+ S + +G I ++ +G+ + ++ L+++Y KF ++ A+ +F
Sbjct: 64 YSELIKCCI----SNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI-PNSVTMVSVXXXXXXXX 179
MP +N +SW+ MI Y+K + KALEL +VL D++ PN T SV
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALEL---LVLMLRDNVRPNVYTYSSV---LRSCN 173
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+H I++ GL+S + V +ALI ++ + GE VFD++ D + WNS+I
Sbjct: 174 GMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIG 233
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
+ N A+++F+ M G + +VL AC+ L+E G ++ + +
Sbjct: 234 GFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG---MQAHVHIVKYD 290
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLG 342
+ +VD+ + L++A+++ M E W +++
Sbjct: 291 QDLILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMIS 332
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/536 (38%), Positives = 314/536 (58%), Gaps = 5/536 (0%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y E+G L+ ARK+FDE E+ Y W A + EE L LY M +P+ R
Sbjct: 161 YAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQ--RVPNSR-PN 217
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
+ + V + +V +++GKEIH +I+R G + + + ++L+D+Y K GCI A ++F
Sbjct: 218 IFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFD 277
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
+ K+ VSW++MI Y K+ + LF ++V +C+ PN T V
Sbjct: 278 KIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELV-GSCER-PNEYTFAGVLNACADLTTE 335
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY 241
VHG++ R G D ++L+ MY +CG I + V D PD+VSW SLI
Sbjct: 336 ELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGC 395
Query: 242 GNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPG 301
NG +A++ F+ ++ G P +++F+ VL AC+HAGLVE+G F S+ K+R+
Sbjct: 396 AQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHT 455
Query: 302 MEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLF 361
+HY C+VDLL R+ R ++ +I +MP +P +W S+LG C + N +LAE A+ LF
Sbjct: 456 SDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELF 515
Query: 362 ELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSE 421
++EP N YV +A+IYA A W + +RK M + + K PG SW E+K+K + F++++
Sbjct: 516 KIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAAD 575
Query: 422 EDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLIN 481
+P ++ L +L +MKE+GY P T++V +D+++ +KE L+ HSEKLAVAF +++
Sbjct: 576 TSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILS 635
Query: 482 TVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
T +G I++ KNLR C DCH KFIS R+I VRD RFHCF +G CSCG+YW
Sbjct: 636 TEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 148/337 (43%), Gaps = 38/337 (11%)
Query: 39 GEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIH 98
G++LL Q+ TY +++ C + L++GK++H +I G+ I
Sbjct: 66 GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTR----ALEEGKKVHEHIRTSGFVPGIV 121
Query: 99 VMTTLLDVYAKFGCISYANSVFRAMP-------------------------------AKN 127
+ LL +YAK G + A VF MP K+
Sbjct: 122 IWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKD 181
Query: 128 SVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXV 187
S SW+AM+ Y K D P +AL L+ ++ +S PN T+ +
Sbjct: 182 SYSWTAMVTGYVKKDQPEEALVLY-SLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEI 240
Query: 188 HGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYG 247
HG I+R GLDS + ++L+ MYG+CG I +FDK+ DVVSW S+I Y +
Sbjct: 241 HGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRW 300
Query: 248 KKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC 307
++ +F ++ P+ +F VL AC+ E GK + +++ P +
Sbjct: 301 REGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQV-HGYMTRVGFDPYSFASSS 359
Query: 308 MVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSC 344
+VD+ + ++ A +++ P +P W SL+G C
Sbjct: 360 LVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGC 395
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 117/268 (43%), Gaps = 33/268 (12%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G +D AR +FD+ E+ + W + R E L+ ++ S + +T
Sbjct: 262 MYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYT 321
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ VL AC ++ + L GK++H + R G++ ++L+D+Y K G I A V
Sbjct: 322 FAGVLNAC--ADLTTEEL--GKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVV 377
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
P + VSW+++IG A+N P +AL+ F +L + P+ VT V+V
Sbjct: 378 DGCPKPDLVSWTSLIGGCAQNGQPDEALKYFD--LLLKSGTKPDHVTFVNV--------- 426
Query: 181 XXXXXXVHGFILRRGLDSIMPVI------------NALITMYGRCGEISIGERVFDKVK- 227
H ++ +GL+ + L+ + R G + V ++
Sbjct: 427 --LSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPM 484
Query: 228 NPDVVSWNSLI---SMYGNNGYGKKAIQ 252
P W S++ S YGN ++A Q
Sbjct: 485 KPSKFLWASVLGGCSTYGNIDLAEEAAQ 512
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/550 (37%), Positives = 321/550 (58%), Gaps = 18/550 (3%)
Query: 2 YHELGSLDCARKVFDETRERTIYI----WNAFFRALAMVGRGEELLELYRQMNWSGIPSD 57
Y ++G + A ++F++ +E I + W+A A G G E L + RQM SGI +
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Query: 58 RFTYTYVLKACVVSEFSVYPLQKGKEIHA-------NILRHGYEENIHVMTTLLDVYAKF 110
T VL C SV L GKEIH ++ ++G+ + V+ L+D+YAK
Sbjct: 365 EVTLISVLSGCA----SVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC 420
Query: 111 GCISYANSVFRAMPAK--NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTM 168
+ A ++F ++ K + V+W+ MIG Y+++ KALEL +M E C + PN+ T+
Sbjct: 421 KKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTI 480
Query: 169 VSVXXXXXXXXXXXXXXXVHGFILRRGLDSI-MPVINALITMYGRCGEISIGERVFDKVK 227
+H + LR +++ + V N LI MY +CG IS VFD +
Sbjct: 481 SCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMM 540
Query: 228 NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKI 287
+ V+W SL++ YG +GYG++A+ IF+ M G ++ + VL ACSH+G++++G
Sbjct: 541 AKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME 600
Query: 288 LFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 347
F M + + + PG EHYAC+VDLLGRA RL+ A++LIE+MP EP P VW + L CRIH
Sbjct: 601 YFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIH 660
Query: 348 CNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSW 407
EL E A+ + EL + G+Y LL+++YA A W DV +R LM + ++K PGCSW
Sbjct: 661 GKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSW 720
Query: 408 IEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILL 467
+E K +F ++ +P +++ +L+ +K+ GY P+T +D+D+ EK+ +L
Sbjct: 721 VEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLF 780
Query: 468 GHSEKLAVAFGLINTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFR 527
HSEKLA+A+G++ T +G IRITKNLR+C DCH ++S+ + +I++RD +RFH F+
Sbjct: 781 EHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFK 840
Query: 528 DGVCSCGEYW 537
+G CSC YW
Sbjct: 841 NGSCSCKGYW 850
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 166/398 (41%), Gaps = 50/398 (12%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM-NWSGIPSDRF 59
MY SL ARKVFDE + WN+ + A +G+ + LE++ +M N G D
Sbjct: 171 MYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNI 230
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
T VL C + + L GK++H + +N+ V L+D+YAK G + AN+V
Sbjct: 231 TLVNVLPPC--ASLGTHSL--GKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTV 286
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQM------------------------- 154
F M K+ VSW+AM+ Y++ A+ LF +M
Sbjct: 287 FSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLG 346
Query: 155 --VLEACDSI------PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD-------SI 199
L C + PN VT++SV +H + ++ +D
Sbjct: 347 YEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDE 406
Query: 200 MPVINALITMYGRCGEISIGERVFDKV--KNPDVVSWNSLISMYGNNGYGKKAIQIFENM 257
VIN LI MY +C ++ +FD + K DVV+W +I Y +G KA+++ M
Sbjct: 407 NMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM 466
Query: 258 IHQG--VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRA 315
+ P+ + L AC+ + GK + L + + C++D+ +
Sbjct: 467 FEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKC 526
Query: 316 NRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 353
+ +A +L+ D W SL+ +H E A
Sbjct: 527 GSISDA-RLVFDNMMAKNEVTWTSLMTGYGMHGYGEEA 563
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 169/384 (44%), Gaps = 51/384 (13%)
Query: 23 IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGK 82
+Y WN+ R+ G + L L+ M+ D +T+ +V KAC E S ++ G+
Sbjct: 92 VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKAC--GEIS--SVRCGE 147
Query: 83 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKND 142
HA L G+ N+ V L+ +Y++ +S A VF M + VSW+++I YAK
Sbjct: 148 SAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLG 207
Query: 143 MPVKALELFHQMVLE-ACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMP 201
P ALE+F +M E C P+++T+V+V +H F + + M
Sbjct: 208 KPKVALEMFSRMTNEFGCR--PDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMF 265
Query: 202 VINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFE------ 255
V N L+ MY +CG + VF + DVVSWN++++ Y G + A+++FE
Sbjct: 266 VGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEK 325
Query: 256 -----------------------------NMIHQGVSPSYISFITVLCACSHAGLVEEGK 286
M+ G+ P+ ++ I+VL C+ G + GK
Sbjct: 326 IKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGK 385
Query: 287 ILFESMLSKYRIH-----PGMEHYAC--MVDLLGRANRLDEAIKLIEDM-PFEPGPTVWG 338
+ + KY I G E+ ++D+ + ++D A + + + P E W
Sbjct: 386 EIHCYAI-KYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWT 444
Query: 339 SLLGSCRIHCNAELAERASAMLFE 362
++G H +A A + +FE
Sbjct: 445 VMIGGYSQHGDANKALELLSEMFE 468
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 115/250 (46%), Gaps = 7/250 (2%)
Query: 82 KEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNS--VSWSAMIGCYA 139
K IH +L G +++ + L+ Y GC+S+A S+ R P ++ W+++I Y
Sbjct: 45 KLIHQKLLSFGIL-TLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYG 103
Query: 140 KNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSI 199
N K L LF M + P++ T V H L G S
Sbjct: 104 DNGCANKCLYLFGLM--HSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISN 161
Query: 200 MPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIH 259
+ V NAL+ MY RC +S +VFD++ DVVSWNS+I Y G K A+++F M +
Sbjct: 162 VFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTN 221
Query: 260 Q-GVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRL 318
+ G P I+ + VL C+ G GK L ++ I M C+VD+ + +
Sbjct: 222 EFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQ-NMFVGNCLVDMYAKCGMM 280
Query: 319 DEAIKLIEDM 328
DEA + +M
Sbjct: 281 DEANTVFSNM 290
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 389 bits (999), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/572 (37%), Positives = 314/572 (54%), Gaps = 41/572 (7%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPS-DRF 59
++ ++G +D A F++ ER I WN+ G L+++ +M + S DRF
Sbjct: 221 LHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRF 280
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEEN----------------------- 96
T VL AC E L GK+IH++I+ G++ +
Sbjct: 281 TLASVLSACANLE----KLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRL 336
Query: 97 ----------IHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVK 146
I T LLD Y K G ++ A ++F ++ ++ V+W+AMI Y ++ +
Sbjct: 337 IEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGE 396
Query: 147 ALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINAL 206
A+ LF MV PNS T+ ++ +HG ++ G + V NAL
Sbjct: 397 AINLFRSMV--GGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNAL 454
Query: 207 ITMYGRCGEISIGERVFDKVK-NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPS 265
ITMY + G I+ R FD ++ D VSW S+I +G+ ++A+++FE M+ +G+ P
Sbjct: 455 ITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPD 514
Query: 266 YISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLI 325
+I+++ V AC+HAGLV +G+ F+ M +I P + HYACMVDL GRA L EA + I
Sbjct: 515 HITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFI 574
Query: 326 EDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWS 385
E MP EP WGSLL +CR+H N +L + A+ L LEP N+G Y LA++Y+ W
Sbjct: 575 EKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWE 634
Query: 386 DVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKEQG 445
+ +RK M ++K G SWIEVK K++ F + +P+ ++ + K+ E+K+ G
Sbjct: 635 EAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMG 694
Query: 446 YAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLINTVKGETIRITKNLRLCEDCHAFTK 505
Y P T V +DL+E KE+IL HSEKLA+AFGLI+T T+RI KNLR+C DCH K
Sbjct: 695 YVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIK 754
Query: 506 FISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
FISK REI+VRD RFH F+DG CSC +YW
Sbjct: 755 FISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 175/430 (40%), Gaps = 72/430 (16%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y + G +D + FD+ +R W +G+ + + + M GI +FT
Sbjct: 90 YSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTL 149
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAK------------ 109
T VL + + ++ GK++H+ I++ G N+ V +LL++YAK
Sbjct: 150 TNVLASVAATR----CMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFD 205
Query: 110 -------------------FGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALEL 150
G + A + F M ++ V+W++MI + + ++AL++
Sbjct: 206 RMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDI 265
Query: 151 FHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMY 210
F +M+ ++ S P+ T+ SV +H I+ G D V+NALI+MY
Sbjct: 266 FSKMLRDSLLS-PDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMY 324
Query: 211 GRCGEISIGER---------------------------------VFDKVKNPDVVSWNSL 237
RCG + R +F +K+ DVV+W ++
Sbjct: 325 SRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAM 384
Query: 238 ISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYR 297
I Y +G +AI +F +M+ G P+ + +L S + GK + S +
Sbjct: 385 IVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGE 444
Query: 298 IHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA-ERA 356
I+ + ++ + +A + A + + + E W S++ + H +AE A E
Sbjct: 445 IYS-VSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELF 503
Query: 357 SAMLFE-LEP 365
ML E L P
Sbjct: 504 ETMLMEGLRP 513
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 139/335 (41%), Gaps = 58/335 (17%)
Query: 42 LLELYRQMNWSGIPSDRFTYTYVLKACVVSE----FSVYPL--------QKGKEIHANIL 89
LLEL + + +T L C V + FSVY + + G +HA L
Sbjct: 12 LLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKL 71
Query: 90 ------RHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDM 143
R + N T+L Y+K G + F +P ++SVSW+ MI Y
Sbjct: 72 FDEMPLRTAFSWN-----TVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQ 126
Query: 144 PVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVI 203
KA+ + MV E + P T+ +V VH FI++ GL + V
Sbjct: 127 YHKAIRVMGDMVKEGIE--PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVS 184
Query: 204 NALITMYGRCGEISIGERVFDK-------------------------------VKNPDVV 232
N+L+ MY +CG+ + + VFD+ + D+V
Sbjct: 185 NSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIV 244
Query: 233 SWNSLISMYGNNGYGKKAIQIFENMIHQG-VSPSYISFITVLCACSHAGLVEEGKILFES 291
+WNS+IS + GY +A+ IF M+ +SP + +VL AC++ + GK +
Sbjct: 245 TWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSH 304
Query: 292 MLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIE 326
+++ G+ A ++ + R ++ A +LIE
Sbjct: 305 IVTTGFDISGIVLNA-LISMYSRCGGVETARRLIE 338
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 389 bits (999), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/529 (38%), Positives = 309/529 (58%), Gaps = 7/529 (1%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + GSL+ ARKVF++ +R W + R + L + QM G + FT
Sbjct: 104 MYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFT 163
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ V+KA G ++H ++ G++ N+HV + LLD+Y ++G + A VF
Sbjct: 164 LSSVIKAAAAERRGCC----GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVF 219
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
A+ ++N VSW+A+I +A+ KALELF M+ + P+ + S+
Sbjct: 220 DALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFR--PSHFSYASLFGACSSTGF 277
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
VH ++++ G + N L+ MY + G I ++FD++ DVVSWNSL++
Sbjct: 278 LEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTA 337
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
Y +G+GK+A+ FE M G+ P+ ISF++VL ACSH+GL++EG +E ++ K I P
Sbjct: 338 YAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYE-LMKKDGIVP 396
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
HY +VDLLGRA L+ A++ IE+MP EP +W +LL +CR+H N EL A+ +
Sbjct: 397 EAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHV 456
Query: 361 FELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 420
FEL+P + G +V+L +IYA W+D VRK M + ++K P CSW+E++ I+ FV++
Sbjct: 457 FELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVAN 516
Query: 421 EEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLI 480
+E +PQ E++ ++ ++KE GY P T+ V +D+ E+E L HSEK+A+AF L+
Sbjct: 517 DERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALL 576
Query: 481 NTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDG 529
NT G TI I KN+R+C DCH K SK REI+VRD NRFH F+D
Sbjct: 577 NTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDA 625
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 160/300 (53%), Gaps = 16/300 (5%)
Query: 52 SGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFG 111
S IP+DR Y +LK C V + L +G+ +HA+IL+ + +I + TLL++YAK G
Sbjct: 54 SYIPADRRFYNTLLKKCTVFKL----LIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 112 CISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 171
+ A VF MP ++ V+W+ +I Y+++D P AL F+QM+ PN T+ SV
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYS--PNEFTLSSV 167
Query: 172 XXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDV 231
+HGF ++ G DS + V +AL+ +Y R G + + VFD +++ +
Sbjct: 168 IKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND 227
Query: 232 VSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFES 291
VSWN+LI+ + +KA+++F+ M+ G PS+ S+ ++ ACS G +E+GK
Sbjct: 228 VSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGK----- 282
Query: 292 MLSKYRIHPGMEHYA----CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 347
+ Y I G + A ++D+ ++ + +A K+ + + + W SLL + H
Sbjct: 283 WVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQH 341
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 388 bits (996), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/529 (38%), Positives = 306/529 (57%), Gaps = 9/529 (1%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 70
R +FDE E +N + + + E L +R+M G DR + + +
Sbjct: 304 TRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGF--DRRNFPFATMLSIA 361
Query: 71 SEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVS 130
+ S LQ G+++H L + +HV +L+D+YAK A +F+++P + +VS
Sbjct: 362 ANLS--SLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVS 419
Query: 131 WSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGF 190
W+A+I Y + + L+LF +M + + T +V +H F
Sbjct: 420 WTALISGYVQKGLHGAGLKLFTKM--RGSNLRADQSTFATVLKASASFASLLLGKQLHAF 477
Query: 191 ILRRG-LDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKK 249
I+R G L+++ + L+ MY +CG I +VF+++ + + VSWN+LIS + +NG G+
Sbjct: 478 IIRSGNLENVFSG-SGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEA 536
Query: 250 AIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMV 309
AI F MI G+ P +S + VL ACSH G VE+G F++M Y I P +HYACM+
Sbjct: 537 AIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACML 596
Query: 310 DLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPW-NA 368
DLLGR R EA KL+++MPFEP +W S+L +CRIH N LAERA+ LF +E +A
Sbjct: 597 DLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDA 656
Query: 369 GNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIE 428
YV +++IYA A W V+ V+K M +R ++KVP SW+EV KI+ F S+++ +P +
Sbjct: 657 AAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGD 716
Query: 429 KLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLINTVKGETI 488
++ + +L+ E++ +GY P T+ V D+DE K L HSE+LAVAF LI+T +G I
Sbjct: 717 EIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPI 776
Query: 489 RITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
+ KNLR C DCHA K ISK REI VRD +RFH F +GVCSCG+YW
Sbjct: 777 VVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 164/368 (44%), Gaps = 14/368 (3%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y E+ LD A +F+E E+ +N G E + L+ +M SG FT+
Sbjct: 194 YCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTF 253
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
+ VLKA V ++ G+++HA + G+ + V +LD Y+K + +F
Sbjct: 254 SGVLKAVV----GLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFD 309
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACD--SIPNSVTMVSVXXXXXXXX 179
MP + VS++ +I Y++ D +L F +M D + P + TM+S+
Sbjct: 310 EMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFA-TMLSI---AANLS 365
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+H L DSI+ V N+L+ MY +C E +F + VSW +LIS
Sbjct: 366 SLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALIS 425
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
Y G +++F M + +F TVL A + + GK L ++ +
Sbjct: 426 GYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE 485
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAM 359
+ + +VD+ + + +A+++ E+MP + W +L+ + + + E A A A
Sbjct: 486 -NVFSGSGLVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISAHADNGDGEAAIGAFAK 543
Query: 360 LFE--LEP 365
+ E L+P
Sbjct: 544 MIESGLQP 551
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 134/291 (46%), Gaps = 33/291 (11%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + + A +F +RT W A G L+L+ +M S + +D+ T
Sbjct: 395 MYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQST 454
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ VLKA S L GK++HA I+R G EN+ + L+D+YAK G I A VF
Sbjct: 455 FATVLKASA----SFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVF 510
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
MP +N+VSW+A+I +A N A+ F +M+ P+SV+++ V
Sbjct: 511 EEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQ--PDSVSILGVLTACS---- 564
Query: 181 XXXXXXVHGFILRRGLD---SIMPVIN---------ALITMYGRCGEISIGERVFDKVK- 227
H + +G + ++ P+ ++ + GR G + E++ D++
Sbjct: 565 -------HCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPF 617
Query: 228 NPDVVSWNSLIS---MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCA 275
PD + W+S+++ ++ N ++A + +M + +Y+S + A
Sbjct: 618 EPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAA 668
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 17/269 (6%)
Query: 71 SEFSVYPLQKGKEIHANILRHGYEENIHVMT----TLLDVYAKFGCISYANSVFRAMPAK 126
S F V L + ++ A R Y+E H T T++ + K G +S A +F AMP +
Sbjct: 51 SNFIVEDLLRRGQVSA--ARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDR 108
Query: 127 NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXX 186
V+W+ ++G YA+N +A +LF QM + ++P+ VT ++
Sbjct: 109 TVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQ 168
Query: 187 VHGFILRRGLDS--IMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNN 244
VH F ++ G D+ + V N L+ Y + + +F+++ D V++N+LI+ Y +
Sbjct: 169 VHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKD 228
Query: 245 GYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 304
G ++I +F M G PS +F VL A +V L + G
Sbjct: 229 GLYTESIHLFLKMRQSGHQPSDFTFSGVLKA-----VVGLHDFALGQQLHALSVTTGFSR 283
Query: 305 YAC----MVDLLGRANRLDEAIKLIEDMP 329
A ++D + +R+ E L ++MP
Sbjct: 284 DASVGNQILDFYSKHDRVLETRMLFDEMP 312
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 145/344 (42%), Gaps = 20/344 (5%)
Query: 6 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSG---IPSDRFTYT 62
G + AR +FD +RT+ W A +E +L+RQM S +P D T+T
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLP-DHVTFT 151
Query: 63 YVLKACVVSEFSVYPLQKGKEIHANILRHGYEEN--IHVMTTLLDVYAKFGCISYANSVF 120
+L C P ++HA ++ G++ N + V LL Y + + A +F
Sbjct: 152 TLLPGCN----DAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLF 207
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+P K+SV+++ +I Y K+ + +++ LF +M P+ T V
Sbjct: 208 EEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKM--RQSGHQPSDFTFSGVLKAVVGLHD 265
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+H + G V N ++ Y + + +FD++ D VS+N +IS
Sbjct: 266 FALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISS 325
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILF-ESMLSKYR-- 297
Y + ++ F M G F T+L ++ ++ G+ L +++L+
Sbjct: 326 YSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSI 385
Query: 298 IHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 341
+H G +VD+ + +EA + + +P + W +L+
Sbjct: 386 LHVG----NSLVDMYAKCEMFEEAELIFKSLP-QRTTVSWTALI 424
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/539 (38%), Positives = 317/539 (58%), Gaps = 12/539 (2%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y + G ++ AR+VFD ER++ WN E L+++ +M G FT
Sbjct: 106 YSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTI 165
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
+ VL AC V+ ++ + K++H ++ + N++V T LLD+YAK G I A VF
Sbjct: 166 SSVLSACGVNCDAL----ECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFE 221
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELF---HQMVLEACDSIPNSVTMVSVXXXXXXX 178
+M K+SV+WS+M+ Y +N +AL L+ +M LE N T+ SV
Sbjct: 222 SMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLE-----QNQFTLSSVICACSNL 276
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
+H I + G S + V ++ + MY +CG + +F +V+ ++ WN++I
Sbjct: 277 AALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTII 336
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 298
S + + K+ + +FE M G+ P+ ++F ++L C H GLVEEG+ F+ M + Y +
Sbjct: 337 SGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGL 396
Query: 299 HPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASA 358
P + HY+CMVD+LGRA L EA +LI+ +PF+P ++WGSLL SCR++ N ELAE A+
Sbjct: 397 SPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAE 456
Query: 359 MLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFV 418
LFELEP NAGN+VLL++IYA K W ++ RKL+ ++KV G SWI++K K+++F
Sbjct: 457 KLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFS 516
Query: 419 SSEEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFG 478
E +P+I ++ + L L + ++ GY P +D++ G+KE +L+ HSEKLA+ FG
Sbjct: 517 VGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFG 576
Query: 479 LINTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
L+ + +RI KNLR+C DCH F K S R I+VRDVNRFH F DG CSCG++W
Sbjct: 577 LMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 130/270 (48%), Gaps = 4/270 (1%)
Query: 78 LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGC 137
+ + K H I+R E ++ ++ L++ Y+K G + A VF M ++ VSW+ MIG
Sbjct: 77 VMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGL 136
Query: 138 YAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD 197
Y +N M +AL++F +M E + T+ SV +H ++ +D
Sbjct: 137 YTRNRMESEALDIFLEMRNEGFKF--SEFTISSVLSACGVNCDALECKKLHCLSVKTCID 194
Query: 198 SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM 257
+ V AL+ +Y +CG I +VF+ +++ V+W+S+++ Y N ++A+ ++
Sbjct: 195 LNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRA 254
Query: 258 IHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANR 317
+ + + +V+CACS+ + EGK + +++ K + + VD+ +
Sbjct: 255 QRMSLEQNQFTLSSVICACSNLAALIEGKQM-HAVICKSGFGSNVFVASSAVDMYAKCGS 313
Query: 318 LDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 347
L E+ + ++ E +W +++ H
Sbjct: 314 LRESYIIFSEVQ-EKNLELWNTIISGFAKH 342
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 119/262 (45%), Gaps = 46/262 (17%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y + G + A +VF+ ++++ W++ EE L LYR+ + ++FT
Sbjct: 206 LYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFT 265
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ V+ AC ++ L +GK++HA I + G+ N+ V ++ +D+YAK G + + +F
Sbjct: 266 LSSVICACS----NLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIF 321
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+ KN W+ +I +AK+ P + + LF +M + PN VT S
Sbjct: 322 SEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMH--PNEVTFSS---------- 369
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK-----NPDVVSWN 235
L+++ G G + G R F ++ +P+VV ++
Sbjct: 370 -------------------------LLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYS 404
Query: 236 SLISMYGNNGYGKKAIQIFENM 257
++ + G G +A ++ +++
Sbjct: 405 CMVDILGRAGLLSEAYELIKSI 426
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 70/139 (50%), Gaps = 8/139 (5%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + GSL + +F E +E+ + +WN A R +E++ L+ +M G+ + T
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILR--HGYEENIHVMTTLLDVYAKFGCISYANS 118
++ +L C + +++G+ ++R +G N+ + ++D+ + G +S A
Sbjct: 367 FSSLLSVCGHTGL----VEEGRRFF-KLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYE 421
Query: 119 VFRAMPAKNSVS-WSAMIG 136
+ +++P + S W +++
Sbjct: 422 LIKSIPFDPTASIWGSLLA 440
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/539 (36%), Positives = 311/539 (57%), Gaps = 9/539 (1%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWS--GIPSDRF 59
Y LG CA K+FDE ER + WN+ + G + E+ +M S G +
Sbjct: 76 YLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEV 135
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
T+ ++ ACV ++G+ IH +++ G E + V+ ++ Y K G ++ + +
Sbjct: 136 TFLSMISACVYGG----SKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKL 191
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F + KN VSW+ MI + +N + K L F+ + P+ T ++V
Sbjct: 192 FEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFN--MSRRVGHEPDQATFLAVLRSCEDMG 249
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+HG I+ G + AL+ +Y + G + VF ++ +PD ++W ++++
Sbjct: 250 VVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLA 309
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
Y +G+G+ AI+ FE M+H G+SP +++F +L ACSH+GLVEEGK FE+M +YRI
Sbjct: 310 AYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRID 369
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAM 359
P ++HY+CMVDLLGR+ L +A LI++MP EP VWG+LLG+CR++ + +L +A+
Sbjct: 370 PRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAER 429
Query: 360 LFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVS 419
LFELEP + NYV+L++IY+ + +W D +R LM ++ L + GCS+IE KI+ FV
Sbjct: 430 LFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVV 489
Query: 420 SEEDNPQIEKLRALLIKLSTEMK-EQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFG 478
+ +P+ EK++ L ++ +MK E GY +T V +D+ E KE ++ HSEK+A+AFG
Sbjct: 490 GDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFG 549
Query: 479 LINTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
L+ E I I KNLR+C DCH K IS R I++RD RFH F DG CSC +YW
Sbjct: 550 LLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 130/288 (45%), Gaps = 19/288 (6%)
Query: 65 LKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP 124
+K+CV E L K + + RHG+ + L+ Y + G A +F MP
Sbjct: 41 VKSCVSIELC--RLLHCKVVKSVSYRHGF-----IGDQLVGCYLRLGHDVCAEKLFDEMP 93
Query: 125 AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXX 184
++ VSW+++I Y+ K E+ +M++ PN VT +S+
Sbjct: 94 ERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEG 153
Query: 185 XXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNN 244
+HG +++ G+ + V+NA I YG+ G+++ ++F+ + ++VSWN++I ++ N
Sbjct: 154 RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQN 213
Query: 245 GYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVE-----EGKILFESMLSKYRIH 299
G +K + F G P +F+ VL +C G+V G I+F I
Sbjct: 214 GLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCI- 272
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 347
++DL + RL+++ + ++ P W ++L + H
Sbjct: 273 -----TTALLDLYSKLGRLEDSSTVFHEIT-SPDSMAWTAMLAAYATH 314
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 9/159 (5%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y +LG L+ + VF E W A A A G G + ++ + M GI D T
Sbjct: 279 LYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVT 338
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANI-LRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
+T++L AC S +++GK + R+ + + + ++D+ + G + A +
Sbjct: 339 FTHLLNACSHSGL----VEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGL 394
Query: 120 FRAMPAKNSVS-WSAMIGC---YAKNDMPVKALELFHQM 154
+ MP + S W A++G Y + KA E ++
Sbjct: 395 IKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFEL 433
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/594 (37%), Positives = 322/594 (54%), Gaps = 71/594 (11%)
Query: 8 LDCARKVFDETRER---------TIYIWNAFF-------------------RAL--AMVG 37
L ARKVFDE E+ T Y+ N +F A+ V
Sbjct: 204 LHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVN 263
Query: 38 RG--EELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEE 95
RG +E LE+ R+M SGI D FTY V++AC + LQ GK++HA +LR +
Sbjct: 264 RGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGL----LQLGKQVHAYVLRR-EDF 318
Query: 96 NIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCY----------------- 138
+ H +L+ +Y K G A ++F MPAK+ VSW+A++ Y
Sbjct: 319 SFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK 378
Query: 139 --------------AKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXX 184
A+N + L+LF M E + P
Sbjct: 379 EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFE--PCDYAFSGAIKSCAVLGAYCNG 436
Query: 185 XXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNN 244
H +L+ G DS + NALITMY +CG + +VF + D VSWN+LI+ G +
Sbjct: 437 QQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQH 496
Query: 245 GYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 304
G+G +A+ ++E M+ +G+ P I+ +TVL ACSHAGLV++G+ F+SM + YRI PG +H
Sbjct: 497 GHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADH 556
Query: 305 YACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELE 364
YA ++DLL R+ + +A +IE +PF+P +W +LL CR+H N EL A+ LF L
Sbjct: 557 YARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLI 616
Query: 365 PWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDN 424
P + G Y+LL++++A W +V VRKLM R ++K CSWIE++ ++++F+ + +
Sbjct: 617 PEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSH 676
Query: 425 PQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLD-EGEKERILLGHSEKLAVAFGLINTV 483
P+ E + L L EM+ GY P T+ V +D++ +G KE +L HSEK+AVAFGL+
Sbjct: 677 PEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLP 736
Query: 484 KGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
G TIRI KNLR C DCH F +F+S R+I++RD RFH FR+G CSCG +W
Sbjct: 737 PGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 121/262 (46%), Gaps = 33/262 (12%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y G + A+ +F E +E+ I W LA G GEE L+L+ M G + +
Sbjct: 361 YVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAF 420
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
+ +K+C V + G++ HA +L+ G++ ++ L+ +YAK G + A VFR
Sbjct: 421 SGAIKSCAV----LGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFR 476
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
MP +SVSW+A+I ++ +A++++ +M+ + P+ +T+++V
Sbjct: 477 TMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIR--PDRITLLTVLTACS----- 529
Query: 182 XXXXXVHGFILRRG---LDSIMPVIN---------ALITMYGRCGEISIGERVFDKVK-N 228
H ++ +G DS+ V LI + R G+ S E V + +
Sbjct: 530 ------HAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFK 583
Query: 229 PDVVSWNSLIS---MYGNNGYG 247
P W +L+S ++GN G
Sbjct: 584 PTAEIWEALLSGCRVHGNMELG 605
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 134/334 (40%), Gaps = 75/334 (22%)
Query: 78 LQKGKEIHANILRHGYEENIHVMTTLLDVYAKF--------------------------- 110
LQ + +H NI+ G++ H++ L+DVY K
Sbjct: 30 LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSG 89
Query: 111 ----GCISYANSVFRAMPA--KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPN 164
G I+ A VF P +++V ++AMI ++ N+ A+ LF +M E P+
Sbjct: 90 YCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK--PD 147
Query: 165 SVTMVSVXXXXXXXXXXXXX-XXVHGFILRRGLDSIMPVINALITMYGRCGE----ISIG 219
+ T SV H L+ G I V NAL+++Y +C +
Sbjct: 148 NFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSA 207
Query: 220 ERVFDKVKNPDVVSWNSLISMYGNNGYG-------------------------------- 247
+VFD++ D SW ++++ Y NGY
Sbjct: 208 RKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFY 267
Query: 248 KKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC 307
++A+++ M+ G+ ++ +V+ AC+ AGL++ GK + +L + ++
Sbjct: 268 QEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDN--S 325
Query: 308 MVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 341
+V L + + DEA + E MP + W +LL
Sbjct: 326 LVSLYYKCGKFDEARAIFEKMPAKD-LVSWNALL 358
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/568 (36%), Positives = 313/568 (55%), Gaps = 37/568 (6%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y G LD A KVF +E+ + WN+ G ++ LEL+++M + + T
Sbjct: 176 YFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTM 235
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
VL AC + L+ G+++ + I + N+ + +LD+Y K G I A +F
Sbjct: 236 VGVLSACA----KIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFD 291
Query: 122 A-------------------------------MPAKNSVSWSAMIGCYAKNDMPVKALEL 150
A MP K+ V+W+A+I Y +N P +AL +
Sbjct: 292 AMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIV 351
Query: 151 FHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMY 210
FH++ L+ + N +T+VS +H +I + G+ V +ALI MY
Sbjct: 352 FHELQLQKNMKL-NQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMY 410
Query: 211 GRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFI 270
+CG++ VF+ V+ DV W+++I +G G +A+ +F M V P+ ++F
Sbjct: 411 SKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFT 470
Query: 271 TVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPF 330
V CACSH GLV+E + LF M S Y I P +HYAC+VD+LGR+ L++A+K IE MP
Sbjct: 471 NVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPI 530
Query: 331 EPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSV 390
P +VWG+LLG+C+IH N LAE A L ELEP N G +VLL++IYA+ W +V +
Sbjct: 531 PPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSEL 590
Query: 391 RKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKEQGYAPQT 450
RK M L+K PGCS IE+ I+ F+S + +P EK+ L ++ ++K GY P+
Sbjct: 591 RKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEI 650
Query: 451 NIVHYDLDEGE-KERILLGHSEKLAVAFGLINTVKGETIRITKNLRLCEDCHAFTKFISK 509
+ V ++E E KE+ L HSEKLA+ +GLI+T + IR+ KNLR+C DCH+ K IS+
Sbjct: 651 SQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQ 710
Query: 510 FANREILVRDVNRFHCFRDGVCSCGEYW 537
+REI+VRD RFH FR+G CSC ++W
Sbjct: 711 LYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 186/411 (45%), Gaps = 51/411 (12%)
Query: 5 LGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNW---SGIPSDRFTY 61
SL+ ARKVFDE + + WN RA A + +L ++ ++ S +++T+
Sbjct: 77 FASLEYARKVFDEIPKPNSFAWNTLIRAYA--SGPDPVLSIWAFLDMVSESQCYPNKYTF 134
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
+++KA V L G+ +H ++ ++ V +L+ Y G + A VF
Sbjct: 135 PFLIKAAA----EVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFT 190
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
+ K+ VSW++MI + + P KALELF +M E+ D + VTMV V
Sbjct: 191 TIKEKDVVSWNSMINGFVQKGSPDKALELFKKM--ESEDVKASHVTMVGVLSACAKIRNL 248
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK-------------- 227
V +I ++ + + NA++ MY +CG I +R+FD ++
Sbjct: 249 EFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGY 308
Query: 228 -----------------NPDVVSWNSLISMYGNNGYGKKAIQIFENM-IHQGVSPSYISF 269
D+V+WN+LIS Y NG +A+ +F + + + + + I+
Sbjct: 309 AISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITL 368
Query: 270 ITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMP 329
++ L AC+ G +E G+ + S + K+ I + ++ + + L+++ ++ +
Sbjct: 369 VSTLSACAQVGALELGRWI-HSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE 427
Query: 330 FEPGPTVWGSLLGSCRIH-CNAELAERASAMLFELEPWNAG-NYVLLADIY 378
+ VW +++G +H C E A M ++++ N N V +++
Sbjct: 428 -KRDVFVWSAMIGGLAMHGCGNE----AVDMFYKMQEANVKPNGVTFTNVF 473
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 157/335 (46%), Gaps = 19/335 (5%)
Query: 43 LELYRQMNWSG-----IPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENI 97
L L R N+S ++R + +++ CV L++ K+ H +++R G +
Sbjct: 10 LSLPRHPNFSNPNQPTTNNERSRHISLIERCV-------SLRQLKQTHGHMIRTGTFSDP 62
Query: 98 HVMTTLLDVYA--KFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMV 155
+ + L + A F + YA VF +P NS +W+ +I YA PV ++ F MV
Sbjct: 63 YSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMV 122
Query: 156 LEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGE 215
E+ PN T + +HG ++ + S + V N+LI Y CG+
Sbjct: 123 SES-QCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGD 181
Query: 216 ISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCA 275
+ +VF +K DVVSWNS+I+ + G KA+++F+ M + V S+++ + VL A
Sbjct: 182 LDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSA 241
Query: 276 CSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPT 335
C+ +E G+ + S + + R++ + M+D+ + +++A +L + M E
Sbjct: 242 CAKIRNLEFGRQVC-SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME-EKDNV 299
Query: 336 VWGSLLGSCRIHCNAELAERA--SAMLFELEPWNA 368
W ++L I + E A S ++ WNA
Sbjct: 300 TWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNA 334
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 16/143 (11%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G L+ +R+VF+ +R +++W+A LAM G G E ++++ +M + + + T
Sbjct: 409 MYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVT 468
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVM------TTLLDVYAKFGCIS 114
+T V AC G A L H E N ++ ++DV + G +
Sbjct: 469 FTNVFCACS---------HTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLE 519
Query: 115 YANSVFRAMPAKNSVS-WSAMIG 136
A AMP S S W A++G
Sbjct: 520 KAVKFIEAMPIPPSTSVWGALLG 542
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/537 (38%), Positives = 313/537 (58%), Gaps = 7/537 (1%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y G L ARKVFDE +R + WNA L EE L L+R+M+ G D +T
Sbjct: 35 YVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTL 94
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
V + + G++IH +++G E ++ V ++L +Y + G + V R
Sbjct: 95 GSVFSGSA----GLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 150
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
+MP +N V+W+ +I A+N P L L+ M + C PN +T V+V
Sbjct: 151 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCR--PNKITFVTVLSSCSDLAIR 208
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY 241
+H ++ G S++ V+++LI+MY +CG + + F + ++ D V W+S+IS Y
Sbjct: 209 GQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAY 268
Query: 242 GNNGYGKKAIQIFENMIHQ-GVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
G +G G +AI++F M Q + + ++F+ +L ACSH+GL ++G LF+ M+ KY P
Sbjct: 269 GFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKP 328
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
G++HY C+VDLLGRA LD+A +I MP + +W +LL +C IH NAE+A+R +
Sbjct: 329 GLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEI 388
Query: 361 FELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 420
+++P ++ YVLLA+++A AK W DV VRK M + ++K G SW E K +++ F
Sbjct: 389 LQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMG 448
Query: 421 EEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLI 480
+ + +++ + L +L+ EMK +GY P T V +D+DE EKE L+ HSEKLAVAF L+
Sbjct: 449 DRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALM 508
Query: 481 NTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
+G IRI KNLR+C DCH K+IS NREI +RD +RFH F +G CSCG+YW
Sbjct: 509 ILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 94/193 (48%), Gaps = 2/193 (1%)
Query: 94 EENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQ 153
++N L++ Y + G + A VF MP + +W+AMI + + + L LF +
Sbjct: 22 KKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFRE 81
Query: 154 MVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRC 213
M P+ T+ SV +HG+ ++ GL+ + V ++L MY R
Sbjct: 82 M--HGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRN 139
Query: 214 GEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVL 273
G++ GE V + ++V+WN+LI NG + + +++ M G P+ I+F+TVL
Sbjct: 140 GKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVL 199
Query: 274 CACSHAGLVEEGK 286
+CS + +G+
Sbjct: 200 SSCSDLAIRGQGQ 212
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 125/281 (44%), Gaps = 10/281 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY G L V R + WN A G E +L LY+ M SG ++ T
Sbjct: 135 MYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKIT 194
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ VL +C S+ ++ +G++IHA ++ G + V+++L+ +Y+K GC+ A F
Sbjct: 195 FVTVLSSC--SDLAIRG--QGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAF 250
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
++ V WS+MI Y + +A+ELF+ M E + N V +++
Sbjct: 251 SEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMA-EQTNMEINEVAFLNLLYACSHSGL 309
Query: 181 XXXXXXVHGFILRR-GLDSIMPVINALITMYGRCGEISIGERVFDKVK-NPDVVSWNSLI 238
+ ++ + G + ++ + GR G + E + + D+V W +L+
Sbjct: 310 KDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLL 369
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHA 279
S + + A ++F+ ++ + P+ S VL A HA
Sbjct: 370 SACNIHKNAEMAQRVFKEILQ--IDPN-DSACYVLLANVHA 407
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/540 (36%), Positives = 313/540 (57%), Gaps = 16/540 (2%)
Query: 1 MYHELGSLDCARKVFDETRERT--IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDR 58
MY + G + ARKVF+E + + +NA + + ++R+M +G+ D
Sbjct: 97 MYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDS 156
Query: 59 FTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANS 118
T ++ C V E+ L G+ +H ++ G + + V+ + + +Y K G +
Sbjct: 157 VTMLGLVPLCTVPEY----LWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRR 212
Query: 119 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
+F MP K ++W+A+I Y++N + LEL+ QM ++ P+ T+VSV
Sbjct: 213 LFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQM--KSSGVCPDPFTLVSVLSSCAHL 270
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
V + G + V NA I+MY RCG ++ VFD + +VSW ++I
Sbjct: 271 GAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMI 330
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 298
YG +G G+ + +F++MI +G+ P F+ VL ACSH+GL ++G LF +M +Y++
Sbjct: 331 GCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKL 390
Query: 299 HPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASA 358
PG EHY+C+VDLLGRA RLDEA++ IE MP EP VWG+LLG+C+IH N ++AE A A
Sbjct: 391 EPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFA 450
Query: 359 MLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFV 418
+ E EP N G YVL+++IY+++K + +R +M +R +K PG S++E K +++ F+
Sbjct: 451 KVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFL 510
Query: 419 SSEEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEK-ERILLGHSEKLAVAF 477
+ + + Q E++ +L +L T + E + D D GE+ HSE+LA+AF
Sbjct: 511 AGDRSHEQTEEVHRMLDELETSVMELAG-------NMDCDRGEEVSSTTREHSERLAIAF 563
Query: 478 GLINTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
G++N++ G I + KNLR+CEDCH F K +SK +R+ +VRD +RFH F+DGVCSC +YW
Sbjct: 564 GILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 167/339 (49%), Gaps = 14/339 (4%)
Query: 26 WNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIH 85
WN R LA E + LYR M SG D F++ ++LK+C V G+++H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPV----SGQQLH 76
Query: 86 ANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKN--SVSWSAMIGCYAKNDM 143
++ + G E V+T L+ +Y K G ++ A VF P + SV ++A+I Y N
Sbjct: 77 CHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSK 136
Query: 144 PVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVI 203
A +F +M E S+ +SVTM+ + +HG ++ GLDS + V+
Sbjct: 137 VTDAAYMFRRMK-ETGVSV-DSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVL 194
Query: 204 NALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVS 263
N+ ITMY +CG + G R+FD++ +++WN++IS Y NG ++++E M GV
Sbjct: 195 NSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVC 254
Query: 264 PSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIK 323
P + ++VL +C+H G + G + + + S + P + + + R L +A
Sbjct: 255 PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFV-PNVFVSNASISMYARCGNLAKARA 313
Query: 324 LIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFE 362
+ + MP + W +++G +H E+ MLF+
Sbjct: 314 VFDIMPVK-SLVSWTAMIGCYGMHGMGEIG----LMLFD 347
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/533 (37%), Positives = 310/533 (58%), Gaps = 7/533 (1%)
Query: 6 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 65
S+ AR +F+ E I I+N+ R + E+ L+ ++ GI D +T+ +L
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 66 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA 125
KAC V++ L++G+++H ++ G ++N++V TL+++Y + + A VF +
Sbjct: 137 KACAVAK----ALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVE 192
Query: 126 KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXX 185
V ++AMI YA+ + P +AL LF +M + PN +T++SV
Sbjct: 193 PCVVCYNAMITGYARRNRPNEALSLFREMQGKYLK--PNEITLLSVLSSCALLGSLDLGK 250
Query: 186 XVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNG 245
+H + + + V ALI M+ +CG + +F+K++ D +W+++I Y N+G
Sbjct: 251 WIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHG 310
Query: 246 YGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHY 305
+K++ +FE M + V P I+F+ +L ACSH G VEEG+ F M+SK+ I P ++HY
Sbjct: 311 KAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHY 370
Query: 306 ACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEP 365
MVDLL RA L++A + I+ +P P P +W LL +C H N +LAE+ S +FEL+
Sbjct: 371 GSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDD 430
Query: 366 WNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 425
+ G+YV+L+++YA K W V S+RK+M R KVPGCS IEV ++ F S +
Sbjct: 431 SHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKS 490
Query: 426 QIEKLRALLIKLSTEMKEQGYAPQTN-IVHYDLDEGEKERILLGHSEKLAVAFGLINTVK 484
KL L ++ E+K GY P T+ +VH ++++ EKE L HSEKLA+ FGL+NT
Sbjct: 491 ATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPP 550
Query: 485 GETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
G TIR+ KNLR+C DCH K IS R++++RDV RFH F DG CSCG++W
Sbjct: 551 GTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 139/335 (41%), Gaps = 54/335 (16%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY E +D AR VFD E + +NA A R E L L+R+M + + T
Sbjct: 173 MYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEIT 232
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
VL +C + + L GK IH +H + + + V T L+D++AK G + A S+F
Sbjct: 233 LLSVLSSCAL----LGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIF 288
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
M K++ +WSAMI YA + K++ +F +M E P+ +T +
Sbjct: 289 EKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQ--PDEITFL----------- 335
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN-----PDVVSWN 235
L+ G + G + F ++ + P + +
Sbjct: 336 ------------------------GLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYG 371
Query: 236 SLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSK 295
S++ + G + A + + + +SP+ + + +L ACS ++ + + E +
Sbjct: 372 SMVDLLSRAGNLEDAYEFIDKL---PISPTPMLWRILLAACSSHNNLDLAEKVSERIFEL 428
Query: 296 YRIHPGMEHYACMVDLLGRANR---LDEAIKLIED 327
H G Y + +L R + +D K+++D
Sbjct: 429 DDSHGG--DYVILSNLYARNKKWEYVDSLRKVMKD 461
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 380 bits (977), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/575 (36%), Positives = 313/575 (54%), Gaps = 45/575 (7%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY G ++ AR VFDE R + WN G +E +L+ +M S + D
Sbjct: 155 MYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMI 214
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
++ AC + ++ + I+ ++ + + H++T L+ +YA GC+ A F
Sbjct: 215 LCNIVSACGRTG----NMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFF 270
Query: 121 RAMPAKNS-------------------------------VSWSAMIGCYAKNDMPVKALE 149
R M +N V W+ MI Y ++D P +AL
Sbjct: 271 RKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALR 330
Query: 150 LFHQMVLEACDSI-PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALIT 208
+F +M C I P+ V+M SV VH I GL+S + + NALI
Sbjct: 331 VFEEM---CCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALIN 387
Query: 209 MYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYIS 268
MY +CG + VF+K+ +VVSW+S+I+ +G A+ +F M + V P+ ++
Sbjct: 388 MYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVT 447
Query: 269 FITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 328
F+ VL CSH+GLVEEGK +F SM +Y I P +EHY CMVDL GRAN L EA+++IE M
Sbjct: 448 FVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESM 507
Query: 329 PFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVK 388
P +WGSL+ +CRIH EL + A+ + ELEP + G VL+++IYA + W DV+
Sbjct: 508 PVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVR 567
Query: 389 SVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKEQGYAP 448
++R++M ++ + K G S I+ K + F+ ++ + Q ++ A L ++ +++K GY P
Sbjct: 568 NIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVP 627
Query: 449 QTNIVHYDLDEGEKERILLGHSEKLAVAFGLINTVKGE------TIRITKNLRLCEDCHA 502
V D++E EK+ ++L HSEKLA+ FGL+N K E IRI KNLR+CEDCH
Sbjct: 628 DCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHL 687
Query: 503 FTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
F K +SK REI+VRD RFHC+++G+CSC +YW
Sbjct: 688 FFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 164/360 (45%), Gaps = 39/360 (10%)
Query: 25 IWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEI 84
++N F R L+ + Y+++ G D+F++ +LKA VS+ S L +G E+
Sbjct: 78 VFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKA--VSKVSA--LFEGMEL 133
Query: 85 HANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMP 144
H + + V T +D+YA G I+YA +VF M ++ V+W+ MI Y + +
Sbjct: 134 HGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLV 193
Query: 145 VKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVIN 204
+A +LF +M + + +P+ + + ++ ++ F++ + ++
Sbjct: 194 DEAFKLFEEM--KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLT 251
Query: 205 ALITMYG-------------------------------RCGEISIGERVFDKVKNPDVVS 233
AL+TMY +CG + + +FD+ + D+V
Sbjct: 252 ALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVC 311
Query: 234 WNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESML 293
W ++IS Y + Y ++A+++FE M G+ P +S +V+ AC++ G++++ K + S +
Sbjct: 312 WTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWV-HSCI 370
Query: 294 SKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 353
+ + ++++ + LD + E MP W S++ + +H A A
Sbjct: 371 HVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHGEASDA 429
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 98/217 (45%), Gaps = 3/217 (1%)
Query: 78 LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK-NSVSWSAMIG 136
L K++HA+ILR ++ L V + +SYA +VF ++P+ S+ ++ +
Sbjct: 25 LNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIVFNPFLR 84
Query: 137 CYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGL 196
+++ P +A LF+Q + + + + + + +HG +
Sbjct: 85 DLSRSSEP-RATILFYQRIRHVGGRL-DQFSFLPILKAVSKVSALFEGMELHGVAFKIAT 142
Query: 197 DSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFEN 256
V + MY CG I+ VFD++ + DVV+WN++I Y G +A ++FE
Sbjct: 143 LCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEE 202
Query: 257 MIHQGVSPSYISFITVLCACSHAGLVEEGKILFESML 293
M V P + ++ AC G + + ++E ++
Sbjct: 203 MKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLI 239
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/547 (38%), Positives = 322/547 (58%), Gaps = 19/547 (3%)
Query: 2 YHELGSLDCARKVF---DETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDR 58
Y + G L A VF DE R+ WN+ A G + L LY++M + G D
Sbjct: 183 YSKGGLLREAVSVFYGMDELRDEVS--WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDM 240
Query: 59 FTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFG-CISYAN 117
FT VL A S+ L G++ H +++ G+ +N HV + L+D Y+K G C +
Sbjct: 241 FTLASVLNALT----SLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYD 296
Query: 118 S--VFRAMPAKNSVSWSAMIGCYAKND-MPVKALELFHQMVLEACDSIPNSVTMVSVXXX 174
S VF+ + + + V W+ MI Y+ N+ + +A++ F QM + P+ + V V
Sbjct: 297 SEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQM--QRIGHRPDDCSFVCVTSA 354
Query: 175 XXXXXXXXXXXXVHGFILRRGLDS-IMPVINALITMYGRCGEISIGERVFDKVKNPDVVS 233
+HG ++ + S + V NALI++Y + G + VFD++ + VS
Sbjct: 355 CSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVS 414
Query: 234 WNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESML 293
+N +I Y +G+G +A+ +++ M+ G++P+ I+F+ VL AC+H G V+EG+ F +M
Sbjct: 415 FNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMK 474
Query: 294 SKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 353
++I P EHY+CM+DLLGRA +L+EA + I+ MP++PG W +LLG+CR H N LA
Sbjct: 475 ETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALA 534
Query: 354 ERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKK 413
ERA+ L ++P A YV+LA++YA+A+ W ++ SVRK M + ++K PGCSWIEVKKK
Sbjct: 535 ERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKK 594
Query: 414 IYSFVSSEEDNPQIEKLRALLIKLSTEMKEQGYAPQTN--IVHYDLDEGEKERILLG-HS 470
+ FV+ + +P I ++ L ++ +MK+ GY +V D E + LG HS
Sbjct: 595 KHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHS 654
Query: 471 EKLAVAFGLINTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGV 530
EKLAVAFGL++T GE + + KNLR+C DCH KF+S A REI+VRD RFHCF+DG
Sbjct: 655 EKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGK 714
Query: 531 CSCGEYW 537
CSCG+YW
Sbjct: 715 CSCGDYW 721
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 127/282 (45%), Gaps = 13/282 (4%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y + + AR++FDE + +N A + L+++M G D FT
Sbjct: 84 YAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTL 143
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
+ ++ AC + K++H + G++ V + Y+K G + A SVF
Sbjct: 144 SGLIAACCDR------VDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFY 197
Query: 122 AMPA-KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
M ++ VSW++MI Y ++ KAL L+ +M+ + + T+ SV
Sbjct: 198 GMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFK--IDMFTLASVLNALTSLDH 255
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCG---EISIGERVFDKVKNPDVVSWNSL 237
HG +++ G V + LI Y +CG + E+VF ++ +PD+V WN++
Sbjct: 256 LIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTM 315
Query: 238 ISMYG-NNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSH 278
IS Y N ++A++ F M G P SF+ V ACS+
Sbjct: 316 ISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSN 357
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 117/284 (41%), Gaps = 46/284 (16%)
Query: 94 EENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQ 153
E N+ ++ YAK I A +F +P ++VS++ +I YA A+ LF +
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130
Query: 154 M---------------VLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDS 198
M + CD + +H F + G DS
Sbjct: 131 MRKLGFEVDGFTLSGLIAACCDRVD-------------------LIKQLHCFSVSGGFDS 171
Query: 199 IMPVINALITMYGRCGEISIGERVF---DKVKNPDVVSWNSLISMYGNNGYGKKAIQIFE 255
V NA +T Y + G + VF D+++ D VSWNS+I YG + G KA+ +++
Sbjct: 172 YSSVNNAFVTYYSKGGLLREAVSVFYGMDELR--DEVSWNSMIVAYGQHKEGAKALALYK 229
Query: 256 NMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRA 315
MI +G + +VL A + + G+ F L K H + ++D +
Sbjct: 230 EMIFKGFKIDMFTLASVLNALTSLDHLIGGR-QFHGKLIKAGFHQNSHVGSGLIDFYSKC 288
Query: 316 NRLD---EAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERA 356
D ++ K+ +++ P VW +++ + N EL+E A
Sbjct: 289 GGCDGMYDSEKVFQEI-LSPDLVVWNTMISGYSM--NEELSEEA 329
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y++ G+L AR VFD E +N + A G G E L LY++M SGI ++ T
Sbjct: 390 LYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKIT 449
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGY--EENIHVMTTLLDVYAKFGCISYANS 118
+ VL AC + +G+E + N ++ + E + ++D+ + G + A
Sbjct: 450 FVAVLSACA----HCGKVDEGQE-YFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAER 504
Query: 119 VFRAMPAK-NSVSWSAMIG-CYAKNDMPVKALELFHQMVLEACDSIP 163
AMP K SV+W+A++G C +M + MV++ + P
Sbjct: 505 FIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATP 551
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/534 (38%), Positives = 300/534 (56%), Gaps = 27/534 (5%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM------NWSGIPSDRFTYTYV 64
A+ FD + WN A G E+ EL+ M +W+ + S +
Sbjct: 143 AQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDL 202
Query: 65 LKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP 124
KA F V P++ + T ++ Y K + A ++F+ M
Sbjct: 203 EKASHF--FKVAPVR----------------GVVAWTAMITGYMKAKKVELAEAMFKDMT 244
Query: 125 A-KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXX 183
KN V+W+AMI Y +N P L+LF M+ E PNS + S
Sbjct: 245 VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIR--PNSSGLSSALLGCSELSALQL 302
Query: 184 XXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGN 243
+H + + L + + + +LI+MY +CGE+ ++F+ +K DVV+WN++IS Y
Sbjct: 303 GRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQ 362
Query: 244 NGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGME 303
+G KA+ +F MI + P +I+F+ VL AC+HAGLV G FESM+ Y++ P +
Sbjct: 363 HGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPD 422
Query: 304 HYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFEL 363
HY CMVDLLGRA +L+EA+KLI MPF P V+G+LLG+CR+H N ELAE A+ L +L
Sbjct: 423 HYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQL 482
Query: 364 EPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEED 423
NA YV LA+IYA W DV VRK M + + KVPG SWIE++ K++ F SS+
Sbjct: 483 NSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRI 542
Query: 424 NPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLINTV 483
+P+++ + L +L +MK GY P+ ++++E +KE++LL HSEKLAVAFG I
Sbjct: 543 HPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLP 602
Query: 484 KGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
+G I++ KNLR+C DCH KFIS+ REI+VRD RFH F+DG CSCG+YW
Sbjct: 603 QGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/537 (38%), Positives = 304/537 (56%), Gaps = 23/537 (4%)
Query: 6 GSLDCARKVFDETRERTIYIWNAF---FRALAMVGRGEELLELYRQMNWSGIPSDRFTYT 62
G +D AR +FDE RER + W +R V +L E+ + S YT
Sbjct: 186 GRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYT 245
Query: 63 YVLKACVVSEF-SVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
+ EF V P++ +A I+ G + G IS A VF
Sbjct: 246 LSGRIEDAEEFFEVMPMKPVIACNAMIVGFG----------------EVGEISKARRVFD 289
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
M +++ +W MI Y + ++AL+LF QM + P+ +++S+
Sbjct: 290 LMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVR--PSFPSLISILSVCATLASL 347
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY 241
VH ++R D + V + L+TMY +CGE+ + VFD+ + D++ WNS+IS Y
Sbjct: 348 QYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGY 407
Query: 242 GNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPG 301
++G G++A++IF M G P+ ++ I +L ACS+AG +EEG +FESM SK+ + P
Sbjct: 408 ASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPT 467
Query: 302 MEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLF 361
+EHY+C VD+LGRA ++D+A++LIE M +P TVWG+LLG+C+ H +LAE A+ LF
Sbjct: 468 VEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLF 527
Query: 362 ELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSE 421
E EP NAG YVLL+ I A W DV VRK M + K PGCSWIEV KK++ F
Sbjct: 528 ENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGG 587
Query: 422 -EDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLI 480
+++P+ + +L K ++E GY+P + V +D+DE EK L HSE+LAVA+GL+
Sbjct: 588 IKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLL 647
Query: 481 NTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
+G IR+ KNLR+C DCHA K ISK REI++RD NRFH F +G CSC +YW
Sbjct: 648 KLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 138/299 (46%), Gaps = 53/299 (17%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
+ E+G + AR+VFD +R W +A G E L+L+ QM G+ +
Sbjct: 275 FGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSL 334
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
+L C ++ LQ G+++HA+++R ++++++V + L+ +Y K G + A VF
Sbjct: 335 ISILSVCA----TLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFD 390
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
+K+ + W+++I YA + + +AL++FH+M + ++PN VT++
Sbjct: 391 RFSSKDIIMWNSIISGYASHGLGEEALKIFHEM--PSSGTMPNKVTLI------------ 436
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN-----PDVVSWNS 236
A++T G++ G +F+ +++ P V ++
Sbjct: 437 -----------------------AILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSC 473
Query: 237 LISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCAC---SHAGLVE-EGKILFES 291
+ M G G KA+++ E+M + P + +L AC S L E K LFE+
Sbjct: 474 TVDMLGRAGQVDKAMELIESMT---IKPDATVWGALLGACKTHSRLDLAEVAAKKLFEN 529
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 119/297 (40%), Gaps = 69/297 (23%)
Query: 5 LGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMN------WSGIPSDR 58
+G ++ ARK FD + + I WN+ G +E +L+ +M+ W+G+ S
Sbjct: 30 IGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSG- 88
Query: 59 FTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANS 118
Y+ +V +V+ L E N+ T ++ Y + G + A S
Sbjct: 89 ----YIKNRMIVEARNVFELMP-------------ERNVVSWTAMVKGYMQEGMVGEAES 131
Query: 119 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
+F MP +N VSW+ M G + KA +L+ M ++ + N
Sbjct: 132 LFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTN-------------- 177
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
+I R G + +FD+++ +VV+W ++I
Sbjct: 178 ---------------------------MIGGLCREGRVDEARLIFDEMRERNVVTWTTMI 210
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSK 295
+ Y N A ++FE M + + +S+ ++L + +G +E+ + FE M K
Sbjct: 211 TGYRQNNRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMK 263
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 118/279 (42%), Gaps = 25/279 (8%)
Query: 88 ILRHGYEENIHVMTTL-LDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVK 146
ILR Y + V + + ++ G I+ A F ++ K SW++++ Y N +P +
Sbjct: 7 ILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKE 66
Query: 147 ALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINAL 206
A +LF +M S N V+ + V + R + S A+
Sbjct: 67 ARQLFDEM------SERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVS----WTAM 116
Query: 207 ITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSY 266
+ Y + G + E +F ++ + VSW + ++G KA ++++ M + V S
Sbjct: 117 VKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVAS- 175
Query: 267 ISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIE 326
+ I LC G V+E +++F+ M + + + M+ + NR+D A KL E
Sbjct: 176 TNMIGGLC---REGRVDEARLIFDEMRERNVV-----TWTTMITGYRQNNRVDVARKLFE 227
Query: 327 DMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEP 365
MP E W S+L + E AE FE+ P
Sbjct: 228 VMP-EKTEVSWTSMLLGYTLSGRIEDAEE----FFEVMP 261
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 10/159 (6%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G L A+ VFD + I +WN+ A G GEE L+++ +M SG ++ T
Sbjct: 375 MYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVT 434
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANI-LRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
+L AC + L++G EI ++ + + + +D+ + G + A +
Sbjct: 435 LIAILTACSYAG----KLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMEL 490
Query: 120 FRAMPAK-NSVSWSAMIGC---YAKNDMP-VKALELFHQ 153
+M K ++ W A++G +++ D+ V A +LF
Sbjct: 491 IESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEN 529
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 377 bits (969), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/512 (36%), Positives = 294/512 (57%), Gaps = 6/512 (1%)
Query: 26 WNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIH 85
WNA G + L+L+ M+ G SD FT V K C ++ + +GK++H
Sbjct: 485 WNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGF----LFAINQGKQVH 540
Query: 86 ANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPV 145
A ++ GY+ ++ V + +LD+Y K G +S A F ++P + V+W+ MI +N
Sbjct: 541 AYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEE 600
Query: 146 KALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINA 205
+A +F QM L +P+ T+ ++ +H L+ + V +
Sbjct: 601 RAFHVFSQMRLMGV--LPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTS 658
Query: 206 LITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPS 265
L+ MY +CG I +F +++ ++ +WN+++ +G GK+ +Q+F+ M G+ P
Sbjct: 659 LVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPD 718
Query: 266 YISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLI 325
++FI VL ACSH+GLV E SM Y I P +EHY+C+ D LGRA + +A LI
Sbjct: 719 KVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLI 778
Query: 326 EDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWS 385
E M E +++ +LL +CR+ + E +R + L ELEP ++ YVLL+++YA A W
Sbjct: 779 ESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWD 838
Query: 386 DVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKEQG 445
++K R +M ++K PG SWIEVK KI+ FV + N Q E + + + ++K++G
Sbjct: 839 EMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEG 898
Query: 446 YAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLINTVKGETIRITKNLRLCEDCHAFTK 505
Y P+T+ D++E EKER L HSEKLAVAFGL++T IR+ KNLR+C DCH K
Sbjct: 899 YVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMK 958
Query: 506 FISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
+I+K NREI++RD NRFH F+DG+CSCG+YW
Sbjct: 959 YIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 163/348 (46%), Gaps = 22/348 (6%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY +L AR VFD ER + WN+ +A G E + L+ Q+ G+ D++T
Sbjct: 359 MYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYT 418
Query: 61 YTYVLKACVVSEFSVYP--LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANS 118
T VLKA S P L K++H + ++ + V T L+D Y++ C+ A
Sbjct: 419 MTSVLKAA-----SSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEI 473
Query: 119 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
+F + V+W+AM+ Y ++ K L+LF M + S + T+ +V
Sbjct: 474 LFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERS--DDFTLATVFKTCGFL 530
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
VH + ++ G D + V + ++ MY +CG++S + FD + PD V+W ++I
Sbjct: 531 FAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMI 590
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 298
S NG ++A +F M GV P + T+ A S +E+G+ + + L ++
Sbjct: 591 SGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANAL---KL 647
Query: 299 HPGMEHY--ACMVDLLGRANRLDEA---IKLIEDMPFEPGPTVWGSLL 341
+ + + +VD+ + +D+A K IE M T W ++L
Sbjct: 648 NCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNI----TAWNAML 691
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 140/315 (44%), Gaps = 22/315 (6%)
Query: 37 GRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEEN 96
G+ LL+ + M S + D+ T+ +L V V L G+++H L+ G +
Sbjct: 294 GQYSALLKCFADMVESDVECDQVTFILMLATAV----KVDSLALGQQVHCMALKLGLDLM 349
Query: 97 IHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVL 156
+ V +L+++Y K +A +VF M ++ +SW+++I A+N + V+A+ LF Q++
Sbjct: 350 LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLL- 408
Query: 157 EACDSIPNSVTMVSVXXXXXXX---XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRC 213
C P+ TM SV VH + DS V ALI Y R
Sbjct: 409 -RCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF--VSTALIDAYSRN 465
Query: 214 GEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVL 273
+ E +F++ N D+V+WN++++ Y + G K +++F M QG + TV
Sbjct: 466 RCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVF 524
Query: 274 CACSHAGLVEEGKILFESMLSKYRIHPGMEH----YACMVDLLGRANRLDEAIKLIEDMP 329
C + +GK + Y I G + + ++D+ + + A + +P
Sbjct: 525 KTCGFLFAINQGK-----QVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP 579
Query: 330 FEPGPTVWGSLLGSC 344
P W +++ C
Sbjct: 580 V-PDDVAWTTMISGC 593
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 11/199 (5%)
Query: 78 LQKGKEIHANILRHGYEENIH--VMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMI 135
L GK HA IL +EEN ++ L+ +Y+K G ++YA VF MP ++ VSW++++
Sbjct: 55 LMLGKCTHARILT--FEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 136 GCYAKNDMPV-----KALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGF 190
YA++ V +A LF +L + +T+ + HG+
Sbjct: 113 AAYAQSSECVVENIQQAFLLFR--ILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGY 170
Query: 191 ILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKA 250
+ GLD V AL+ +Y + G++ G+ +F+++ DVV WN ++ Y G+ ++A
Sbjct: 171 ACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA 230
Query: 251 IQIFENMIHQGVSPSYISF 269
I + G++P+ I+
Sbjct: 231 IDLSSAFHSSGLNPNEITL 249
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 114/277 (41%), Gaps = 38/277 (13%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y + G + + +F+E R + +WN +A +G EE ++L + SG+ + T
Sbjct: 189 IYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT 248
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ + G + A ++ N + + ++ G Y +S
Sbjct: 249 LRLLARI------------SGDDSDAGQVKSFANGNDASSVSEI-IFRNKGLSEYLHSG- 294
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+SA++ C+A DM +E CD VT + +
Sbjct: 295 ---------QYSALLKCFA--DMVESDVE---------CDQ----VTFILMLATAVKVDS 330
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
VH L+ GLD ++ V N+LI MY + + VFD + D++SWNS+I+
Sbjct: 331 LALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAG 390
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACS 277
NG +A+ +F ++ G+ P + +VL A S
Sbjct: 391 IAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 17/176 (9%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALA-----MVGRGEELLELYRQMNWSGIP 55
MY + GSL AR+VFD+ +R + WN+ A A +V ++ L+R + +
Sbjct: 83 MYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVY 142
Query: 56 SDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISY 115
+ R T + +LK C+ S + + + H + G + + V L+++Y KFG +
Sbjct: 143 TSRMTLSPMLKLCLHSGY----VWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKE 198
Query: 116 ANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALEL---FHQMVLEACDSIPNSVTM 168
+F MP ++ V W+ M+ Y + +A++L FH L PN +T+
Sbjct: 199 GKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLN-----PNEITL 249
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 5/163 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + GS+D A +F I WNA LA G G+E L+L++QM GI D+ T
Sbjct: 662 MYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVT 721
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ VL AC S + + +H + +G + I + L D + G + A ++
Sbjct: 722 FIGVLSACSHSGLVSEAYKHMRSMHGD---YGIKPEIEHYSCLADALGRAGLVKQAENLI 778
Query: 121 RAMPAKNSVSW--SAMIGCYAKNDMPVKALELFHQMVLEACDS 161
+M + S S + + C + D + LE DS
Sbjct: 779 ESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDS 821
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 202 VINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYG-----KKAIQIFEN 256
+IN LI+MY +CG ++ RVFDK+ + D+VSWNS+++ Y + ++A +F
Sbjct: 76 LINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRI 135
Query: 257 MIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRAN 316
+ V S ++ +L C H+G V + F K + +V++ +
Sbjct: 136 LRQDVVYTSRMTLSPMLKLCLHSGYVWASES-FHGYACKIGLDGDEFVAGALVNIYLKFG 194
Query: 317 RLDEAIKLIEDMPFEPGPTVWGSLL 341
++ E L E+MP+ +W +L
Sbjct: 195 KVKEGKVLFEEMPYRD-VVLWNLML 218
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/538 (36%), Positives = 314/538 (58%), Gaps = 8/538 (1%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y G ++ A+K+FDE + + WNA A G +E LEL++ M + + D T
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
V+ AC S ++ G+++H I HG+ N+ ++ L+D+Y+K G + A +F
Sbjct: 270 VTVVSACAQSG----SIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE 325
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
+P K+ +SW+ +IG Y ++ +AL LF +M+ PN VTM+S+
Sbjct: 326 RLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG--ETPNDVTMLSILPACAHLGAI 383
Query: 182 XXXXXVHGFILRR--GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+H +I +R G+ + + +LI MY +CG+I +VF+ + + + SWN++I
Sbjct: 384 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIF 443
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
+ +G + +F M G+ P I+F+ +L ACSH+G+++ G+ +F +M Y++
Sbjct: 444 GFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMT 503
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAM 359
P +EHY CM+DLLG + EA ++I M EP +W SLL +C++H N EL E +
Sbjct: 504 PKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAEN 563
Query: 360 LFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVS 419
L ++EP N G+YVLL++IYA A W++V R L+ + ++KVPGCS IE+ ++ F+
Sbjct: 564 LIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFII 623
Query: 420 SEEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGL 479
++ +P+ ++ +L ++ +++ G+ P T+ V +++E KE L HSEKLA+AFGL
Sbjct: 624 GDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGL 683
Query: 480 INTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
I+T G + I KNLR+C +CH TK ISK REI+ RD RFH FRDGVCSC +YW
Sbjct: 684 ISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 156/310 (50%), Gaps = 37/310 (11%)
Query: 8 LDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA 67
L A VF +E + IWN FR A+ L+LY M G+ + +T+ +VLK+
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143
Query: 68 CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDV--------------------- 106
C S+ ++G++IH ++L+ G + +++V T+L+ +
Sbjct: 144 CAKSK----AFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD 199
Query: 107 ----------YAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVL 156
YA G I A +F +P K+ VSW+AMI YA+ +ALELF M+
Sbjct: 200 VVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMM- 258
Query: 157 EACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEI 216
+ P+ TMV+V VH +I G S + ++NALI +Y +CGE+
Sbjct: 259 -KTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEL 317
Query: 217 SIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCAC 276
+F+++ DV+SWN+LI Y + K+A+ +F+ M+ G +P+ ++ +++L AC
Sbjct: 318 ETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPAC 377
Query: 277 SHAGLVEEGK 286
+H G ++ G+
Sbjct: 378 AHLGAIDIGR 387
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 138/299 (46%), Gaps = 38/299 (12%)
Query: 78 LQKGKEIHANILRHGYEENIHVMTTLLD---VYAKFGCISYANSVFRAMPAKNSVSWSAM 134
LQ + IHA +++ G + ++ L++ + F + YA SVF+ + N + W+ M
Sbjct: 46 LQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTM 105
Query: 135 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 194
+A + PV AL+L+ M+ + +PNS T V +HG +L+
Sbjct: 106 FRGHALSSDPVSALKLYVCMI--SLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKL 163
Query: 195 GLDSIMPVINALITMYGRCGEISIGERVFDK----------------------------- 225
G D + V +LI+MY + G + +VFDK
Sbjct: 164 GCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLF 223
Query: 226 --VKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVE 283
+ DVVSWN++IS Y G K+A+++F++M+ V P + +TV+ AC+ +G +E
Sbjct: 224 DEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIE 283
Query: 284 EGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLG 342
G+ + + + ++ ++DL + L+ A L E +P++ W +L+G
Sbjct: 284 LGRQV-HLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK-DVISWNTLIG 340
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/537 (36%), Positives = 300/537 (55%), Gaps = 6/537 (1%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY +LG LD A + + + W ++ L +RQM GI SD
Sbjct: 534 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 593
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
T + AC + L++G++IHA G+ ++ L+ +Y++ G I + F
Sbjct: 594 LTNAVSACA----GLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAF 649
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
A ++++W+A++ + ++ +AL +F +M E D+ N+ T S
Sbjct: 650 EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDN--NNFTFGSAVKAASETAN 707
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
VH I + G DS V NALI+MY +CG IS E+ F +V + VSWN++I+
Sbjct: 708 MKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINA 767
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
Y +G+G +A+ F+ MIH V P++++ + VL ACSH GLV++G FESM S+Y + P
Sbjct: 768 YSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSP 827
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
EHY C+VD+L RA L A + I++MP +P VW +LL +C +H N E+ E A+ L
Sbjct: 828 KPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHL 887
Query: 361 FELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 420
ELEP ++ YVLL+++YA +K W R+ M ++ ++K PG SWIEVK I+SF
Sbjct: 888 LELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVG 947
Query: 421 EEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLI 480
++++P +++ L+ E GY + +L +K+ I+ HSEKLA++FGL+
Sbjct: 948 DQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLL 1007
Query: 481 NTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
+ I + KNLR+C DCHA+ KF+SK +NREI+VRD RFH F G CSC +YW
Sbjct: 1008 SLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 140/283 (49%), Gaps = 5/283 (1%)
Query: 6 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 65
G L A KVFDE ERTI+ WN + LA E+ L+ +M + + T++ VL
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193
Query: 66 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA 125
+AC + ++ +IHA IL G ++ V L+D+Y++ G + A VF +
Sbjct: 194 EACRGGSVAFDVVE---QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRL 250
Query: 126 KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXX 185
K+ SW AMI +KN+ +A+ LF M + +P SV
Sbjct: 251 KDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGI--MPTPYAFSSVLSACKKIESLEIGE 308
Query: 186 XVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNG 245
+HG +L+ G S V NAL+++Y G + E +F + D V++N+LI+ G
Sbjct: 309 QLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCG 368
Query: 246 YGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKIL 288
YG+KA+++F+ M G+ P + +++ ACS G + G+ L
Sbjct: 369 YGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL 411
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 141/286 (49%), Gaps = 6/286 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y + ++ A F ET + +WN A ++ ++RQM I +++T
Sbjct: 433 LYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYT 492
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
Y +LK C+ + L+ G++IH+ I++ ++ N +V + L+D+YAK G + A +
Sbjct: 493 YPSILKTCI----RLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
K+ VSW+ MI Y + + KAL F QM+ S + V + +
Sbjct: 549 IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS--DEVGLTNAVSACAGLQA 606
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+H G S +P NAL+T+Y RCG+I F++ + D ++WN+L+S
Sbjct: 607 LKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSG 666
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGK 286
+ +G ++A+++F M +G+ + +F + + A S +++GK
Sbjct: 667 FQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGK 712
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 152/323 (47%), Gaps = 11/323 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y G +D AR+VFD R + W A L+ E + L+ M GI +
Sbjct: 231 LYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYA 290
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
++ VL AC + L+ G+++H +L+ G+ + +V L+ +Y G + A +F
Sbjct: 291 FSSVLSACK----KIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIF 346
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
M +++V+++ +I ++ KA+ELF +M L+ + P+S T+ S+
Sbjct: 347 SNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE--PDSNTLASLVVACSADGT 404
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+H + + G S + AL+ +Y +C +I F + + +VV WN ++
Sbjct: 405 LFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVA 464
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
YG + + +IF M + + P+ ++ ++L C G +E G+ + ++ + +
Sbjct: 465 YGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII---KTNF 521
Query: 301 GMEHYAC--MVDLLGRANRLDEA 321
+ Y C ++D+ + +LD A
Sbjct: 522 QLNAYVCSVLIDMYAKLGKLDTA 544
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 113/237 (47%), Gaps = 6/237 (2%)
Query: 53 GIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGC 112
GI + T ++L+ C+ + S L +G+++H+ IL+ G + N + L D Y G
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGS---LDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGD 135
Query: 113 ISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVX 172
+ A VF MP + +W+ MI A ++ + LF +MV E + PN T V
Sbjct: 136 LYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSE--NVTPNEGTFSGVL 193
Query: 173 XX-XXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDV 231
+H IL +GL V N LI +Y R G + + RVFD ++ D
Sbjct: 194 EACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 253
Query: 232 VSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKIL 288
SW ++IS N +AI++F +M G+ P+ +F +VL AC +E G+ L
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 310
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/297 (19%), Positives = 123/297 (41%), Gaps = 44/297 (14%)
Query: 187 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 246
+H IL+ GLDS + L Y G++ +VFD++ + +WN +I +
Sbjct: 107 LHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNL 166
Query: 247 GKKAIQIFENMIHQGVSPSYISFITVLCACS------------HAGLVEEG----KILFE 290
+ +F M+ + V+P+ +F VL AC HA ++ +G ++
Sbjct: 167 IGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCN 226
Query: 291 SMLSKY----------RIHPGM-----EHYACMVDLLGRANRLDEAIKLIEDM---PFEP 332
++ Y R+ G+ + M+ L + EAI+L DM P
Sbjct: 227 PLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMP 286
Query: 333 GPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVL---------LADIYAEAKM 383
P + S+L +C+ + E+ E+ ++ +L +++ YV L ++ + +
Sbjct: 287 TPYAFSSVLSACKKIESLEIGEQLHGLVLKL-GFSSDTYVCNALVSLYFHLGNLISAEHI 345
Query: 384 WSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTE 440
+S++ + ++ + C + E +++ + + P L +L++ S +
Sbjct: 346 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSAD 402
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/542 (37%), Positives = 314/542 (57%), Gaps = 14/542 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + D ARK+FDE ER + WNAF GR E +E + + + T
Sbjct: 152 MYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSIT 211
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ L AC S++ L G ++H +LR G++ ++ V L+D Y K I + +F
Sbjct: 212 FCAFLNAC--SDW--LHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIF 267
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELF---HQMVLEACDSIPNSVTMVSVXXXXXX 177
M KN+VSW +++ Y +N KA L+ + ++E D + + SV
Sbjct: 268 TEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFM-----ISSVLSACAG 322
Query: 178 XXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSL 237
+H ++ ++ + V +AL+ MYG+CG I E+ FD++ ++V+ NSL
Sbjct: 323 MAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSL 382
Query: 238 ISMYGNNGYGKKAIQIFENMIHQGV--SPSYISFITVLCACSHAGLVEEGKILFESMLSK 295
I Y + G A+ +FE M +G +P+Y++F+++L ACS AG VE G +F+SM S
Sbjct: 383 IGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRST 442
Query: 296 YRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAER 355
Y I PG EHY+C+VD+LGRA ++ A + I+ MP +P +VWG+L +CR+H +L
Sbjct: 443 YGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLL 502
Query: 356 ASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIY 415
A+ LF+L+P ++GN+VLL++ +A A W++ +VR+ + ++K G SWI VK +++
Sbjct: 503 AAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVH 562
Query: 416 SFVSSEEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAV 475
+F + + + ++++ L KL EM+ GY P + YDL+E EK + HSEKLA+
Sbjct: 563 AFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLAL 622
Query: 476 AFGLINTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGE 535
AFGL++ IRITKNLR+C DCH+F KF+S REI+VRD NRFH F+DG+CSC +
Sbjct: 623 AFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKD 682
Query: 536 YW 537
YW
Sbjct: 683 YW 684
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 166/382 (43%), Gaps = 14/382 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY +L + AR V T R + W + LA G L + +M G+ + FT
Sbjct: 51 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 110
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ KA V GK+IHA ++ G ++ V + D+Y K A +F
Sbjct: 111 FPCAFKAVASLRLPV----TGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLF 166
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+P +N +W+A I + P +A+E F + D PNS+T +
Sbjct: 167 DEIPERNLETWNAFISNSVTDGRPREAIEAF--IEFRRIDGHPNSITFCAFLNACSDWLH 224
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+HG +LR G D+ + V N LI YG+C +I E +F ++ + VSW SL++
Sbjct: 225 LNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAA 284
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
Y N +KA ++ V S +VL AC+ +E G+ + + K +
Sbjct: 285 YVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAV-KACVER 343
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
+ + +VD+ G+ ++++ + ++MP E SL+G + + + A A+
Sbjct: 344 TIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIGG---YAHQGQVDMALALF 399
Query: 361 FELEPWNAG---NYVLLADIYA 379
E+ P G NY+ + +
Sbjct: 400 EEMAPRGCGPTPNYMTFVSLLS 421
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 3/205 (1%)
Query: 74 SVYPLQKGKEIHANILRH-GYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWS 132
S ++ G+ +HA I++ + L+++Y+K A V R PA+N VSW+
Sbjct: 18 SASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWT 77
Query: 133 AMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFIL 192
++I A+N AL F +M E +PN T +H +
Sbjct: 78 SLISGLAQNGHFSTALVEFFEMRREGV--VPNDFTFPCAFKAVASLRLPVTGKQIHALAV 135
Query: 193 RRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQ 252
+ G + V + MY + ++FD++ ++ +WN+ IS +G ++AI+
Sbjct: 136 KCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIE 195
Query: 253 IFENMIHQGVSPSYISFITVLCACS 277
F P+ I+F L ACS
Sbjct: 196 AFIEFRRIDGHPNSITFCAFLNACS 220
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/569 (35%), Positives = 314/569 (55%), Gaps = 38/569 (6%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + ++D A+++FDE + + NA G E L ++ M SG+ DR +
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKF---------- 110
+ +C + + GK H +LR+G+E ++ L+D+Y K
Sbjct: 340 MLSAISSCS----QLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 111 ---------------------GCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALE 149
G + A F MP KN VSW+ +I + + +A+E
Sbjct: 396 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 455
Query: 150 LFHQMVLEACDSI-PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALIT 208
+F M ++ + + + VTM+S+ ++ +I + G+ + + L+
Sbjct: 456 VFCSM--QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVD 513
Query: 209 MYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYIS 268
M+ RCG+ +F+ + N DV +W + I G ++AI++F++MI QG+ P ++
Sbjct: 514 MFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVA 573
Query: 269 FITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 328
F+ L ACSH GLV++GK +F SML + + P HY CMVDLLGRA L+EA++LIEDM
Sbjct: 574 FVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDM 633
Query: 329 PFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVK 388
P EP +W SLL +CR+ N E+A A+ + L P G+YVLL+++YA A W+D+
Sbjct: 634 PMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMA 693
Query: 389 SVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKEQGYAP 448
VR M ++ L+K PG S I+++ K + F S +E +P++ + A+L ++S G+ P
Sbjct: 694 KVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVP 753
Query: 449 QTNIVHYDLDEGEKERILLGHSEKLAVAFGLINTVKGETIRITKNLRLCEDCHAFTKFIS 508
+ V D+DE EK +L HSEKLA+A+GLI++ KG TIRI KNLR+C DCH+F KF S
Sbjct: 754 DLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFAS 813
Query: 509 KFANREILVRDVNRFHCFRDGVCSCGEYW 537
K NREI++RD NRFH R G CSCG++W
Sbjct: 814 KVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 175/347 (50%), Gaps = 19/347 (5%)
Query: 4 ELG---SLDCARKVFDETRER-TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRF 59
ELG SL A++VF+ + T +++N+ R A G E + L+ +M SGI D++
Sbjct: 76 ELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKY 135
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
T+ + L AC S G +IH I++ GY +++ V +L+ YA+ G + A V
Sbjct: 136 TFPFGLSACAKSRAK----GNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKV 191
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F M +N VSW++MI YA+ D A++LF +MV + + PNSVTMV V
Sbjct: 192 FDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDE-EVTPNSVTMVCVISACAKLE 250
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
V+ FI G++ +++AL+ MY +C I + +R+FD+ ++ N++ S
Sbjct: 251 DLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMAS 310
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
Y G ++A+ +F M+ GV P IS ++ + +CS IL+ Y +
Sbjct: 311 NYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL-----RNILWGKSCHGYVLR 365
Query: 300 PGMEHYA----CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLG 342
G E + ++D+ + +R D A ++ + M + T W S++
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVT-WNSIVA 411
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 143/295 (48%), Gaps = 11/295 (3%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y E G LD ARKVFDE ER + W + A ++ ++L+ +M + + T
Sbjct: 179 YAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM----VRDEEVTP 234
Query: 62 TYVLKACVVSEFS-VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
V CV+S + + L+ G++++A I G E N +++ L+D+Y K I A +F
Sbjct: 235 NSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLF 294
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
A N +AM Y + + +AL +F+ M+ P+ ++M+S
Sbjct: 295 DEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR--PDRISMLSAISSCSQLRN 352
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
HG++LR G +S + NALI MY +C R+FD++ N VV+WNS+++
Sbjct: 353 ILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAG 412
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSK 295
Y NG A + FE M + + +S+ T++ L EE +F SM S+
Sbjct: 413 YVENGEVDAAWETFETMPEKNI----VSWNTIISGLVQGSLFEEAIEVFCSMQSQ 463
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/531 (34%), Positives = 310/531 (58%), Gaps = 5/531 (0%)
Query: 7 SLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLK 66
S++ A +F + + +N R V EE L Y +M G D FTY +LK
Sbjct: 81 SMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLK 140
Query: 67 ACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK 126
AC + +++GK+IH + + G E ++ V +L+++Y + G + +++VF + +K
Sbjct: 141 ACT----RLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESK 196
Query: 127 NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXX 186
+ SWS+M+ A M + L LF M E S MVS
Sbjct: 197 TAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEES-GMVSALLACANTGALNLGMS 255
Query: 187 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 246
+HGF+LR + + V +L+ MY +CG + +F K++ + ++++++IS +G
Sbjct: 256 IHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGE 315
Query: 247 GKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA 306
G+ A+++F MI +G+ P ++ +++VL ACSH+GLV+EG+ +F ML + ++ P EHY
Sbjct: 316 GESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYG 375
Query: 307 CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPW 366
C+VDLLGRA L+EA++ I+ +P E +W + L CR+ N EL + A+ L +L
Sbjct: 376 CLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSH 435
Query: 367 NAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQ 426
N G+Y+L++++Y++ +MW DV R + + L++ PG S +E+K K + FVS + +P+
Sbjct: 436 NPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPK 495
Query: 427 IEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLINTVKGE 486
+++ +L ++ ++K +GY+P + ++DE EK+ L GHS+K+A+AFGL+ T G
Sbjct: 496 CKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGS 555
Query: 487 TIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
I+I +NLR+C DCH +TK IS REI+VRD NRFH F+ G CSC +YW
Sbjct: 556 IIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 112/243 (46%), Gaps = 11/243 (4%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM-NWSGIPSDRF 59
MY G ++ + VF++ +T W++ A A +G E L L+R M + + + ++
Sbjct: 176 MYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEES 235
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
L AC + L G IH +LR+ E NI V T+L+D+Y K GC+ A +
Sbjct: 236 GMVSALLACA----NTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHI 291
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F+ M +N++++SAMI A + AL +F +M+ E + P+ V VSV
Sbjct: 292 FQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLE--PDHVVYVSVLNACSHSG 349
Query: 180 XXXXXXXVHGFILRRG-LDSIMPVINALITMYGRCGEISIGERVFDK--VKNPDVVSWNS 236
V +L+ G ++ L+ + GR G + ++ DV+ W +
Sbjct: 350 LVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVI-WRT 408
Query: 237 LIS 239
+S
Sbjct: 409 FLS 411
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 9/173 (5%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G LD A +F + +R ++A LA+ G GE L ++ +M G+ D
Sbjct: 278 MYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVV 337
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHG-YEENIHVMTTLLDVYAKFGCISYANSV 119
Y VL AC S +++G+ + A +L+ G E L+D+ + G + A
Sbjct: 338 YVSVLNACSHSGL----VKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALET 393
Query: 120 FRAMP-AKNSVSWSAMIG-CYAKNDMPVKALELFHQMVLEACDSIPNSVTMVS 170
+++P KN V W + C + ++ + ++ Q +L+ P ++S
Sbjct: 394 IQSIPIEKNDVIWRTFLSQCRVRQNIELG--QIAAQELLKLSSHNPGDYLLIS 444
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 370 bits (949), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/458 (39%), Positives = 294/458 (64%), Gaps = 3/458 (0%)
Query: 81 GKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAK 140
G+ IH+ ++R G+ I+V +LL +YA G ++ A VF MP K+ V+W+++I +A+
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 141 NDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIM 200
N P +AL L+ +M + P+ T+VS+ VH ++++ GL +
Sbjct: 67 NGKPEEALALYTEMNSKGIK--PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNL 124
Query: 201 PVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM-IH 259
N L+ +Y RCG + + +FD++ + + VSW SLI NG+GK+AI++F+ M
Sbjct: 125 HSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMEST 184
Query: 260 QGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLD 319
+G+ P I+F+ +L ACSH G+V+EG F M +Y+I P +EH+ CMVDLL RA ++
Sbjct: 185 EGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVK 244
Query: 320 EAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYA 379
+A + I+ MP +P +W +LLG+C +H +++LAE A + +LEP ++G+YVLL+++YA
Sbjct: 245 KAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYA 304
Query: 380 EAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLST 439
+ WSDV+ +RK M + ++KVPG S +EV +++ F+ ++ +PQ + + A L +++
Sbjct: 305 SEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTG 364
Query: 440 EMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLINTVKGETIRITKNLRLCED 499
++ +GY PQ + V+ D++E EKE ++ HSEK+A+AF LI+T + I + KNLR+C D
Sbjct: 365 RLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCAD 424
Query: 500 CHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
CH K +SK NREI+VRD +RFH F++G CSC +YW
Sbjct: 425 CHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 134/276 (48%), Gaps = 41/276 (14%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y G + A KVFD+ E+ + WN+ A G+ EE L LY +MN GI D FT
Sbjct: 32 LYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFT 91
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+L AC + L GK +H +++ G N+H LLD+YA+ G + A ++F
Sbjct: 92 IVSLLSACA----KIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLF 147
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDS-IPNSVTMVSVXXXXXXXX 179
M KNSVSW+++I A N +A+ELF M E+ + +P +T V +
Sbjct: 148 DEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM--ESTEGLLPCEITFVGILYACS--- 202
Query: 180 XXXXXXXVHGFILRRGLD---------SIMPVI---NALITMYGRCGEISIGERVFDKVK 227
H +++ G + I P I ++ + R G++ ++ ++ +K
Sbjct: 203 --------HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV---KKAYEYIK 251
Query: 228 N----PDVVSWNSLI---SMYGNNGYGKKA-IQIFE 255
+ P+VV W +L+ +++G++ + A IQI +
Sbjct: 252 SMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQ 287
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/530 (36%), Positives = 303/530 (57%), Gaps = 10/530 (1%)
Query: 13 KVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNW-SGIPSDRFTYTYVLKACVVS 71
+VF + T+ N RA ++ E L+R + S +P++ + ++ LK C+ S
Sbjct: 67 RVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKS 126
Query: 72 EFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSW 131
L G +IH I G+ + +MTTL+D+Y+ + A VF +P +++VSW
Sbjct: 127 G----DLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSW 182
Query: 132 SAMIGCYAKNDMPVKALELFHQMV--LEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHG 189
+ + CY +N L LF +M ++ C P+ VT + VH
Sbjct: 183 NVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVK-PDGVTCLLALQACANLGALDFGKQVHD 241
Query: 190 FILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKK 249
FI GL + + N L++MY RCG + +VF ++ +VVSW +LIS NG+GK+
Sbjct: 242 FIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKE 301
Query: 250 AIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLS-KYRIHPGMEHYACM 308
AI+ F M+ G+SP + +L ACSH+GLV EG + F+ M S +++I P + HY C+
Sbjct: 302 AIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCV 361
Query: 309 VDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNA 368
VDLLGRA LD+A LI+ M +P T+W +LLG+CR+H + EL ER + L EL+ A
Sbjct: 362 VDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEA 421
Query: 369 GNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIE 428
G+YVLL + Y+ W V +R LM ++ + PGCS IE++ ++ F+ + +P+ E
Sbjct: 422 GDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKE 481
Query: 429 KLRALLIKLSTEMKEQGYAPQ-TNIVHYDLDEGEKERILLGHSEKLAVAFGLINTVKGET 487
++ +L +++ ++K GY + T+ +H E EK L HSEKLA+AFG++ T G T
Sbjct: 482 EIYKMLAEINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTT 541
Query: 488 IRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
IR+TKNLR C DCH F KF+S +R ++VRD +RFH F+ G CSC ++W
Sbjct: 542 IRVTKNLRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 4/160 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY GS+D A +VF RER + W A LAM G G+E +E + +M GI + T
Sbjct: 261 MYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQT 320
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
T +L AC S + + + + + N+H ++D+ + + A S+
Sbjct: 321 LTGLLSACSHSGLVAEGMMFFDRMRSGEFK--IKPNLHHYGCVVDLLGRARLLDKAYSLI 378
Query: 121 RAMPAK-NSVSWSAMIG-CYAKNDMPVKALELFHQMVLEA 158
++M K +S W ++G C D+ + + H + L+A
Sbjct: 379 KSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKA 418
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/563 (34%), Positives = 312/563 (55%), Gaps = 39/563 (6%)
Query: 8 LDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSG--IPSDRFTYTYVL 65
LD A ++ D + + T++ N+ RA E+ + YR++ SG + D +T +++
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115
Query: 66 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCIS----------- 114
+AC + + G ++H +R G++ + HV T L+ +YA+ GC+
Sbjct: 116 QACT----GLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPC 171
Query: 115 --------------------YANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQM 154
+A +F MP ++ ++W+AMI YA+ +AL +FH M
Sbjct: 172 PDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLM 231
Query: 155 VLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCG 214
LE N V M+SV H +I R + + + L+ +Y +CG
Sbjct: 232 QLEGVKV--NGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCG 289
Query: 215 EISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLC 274
++ VF ++ +V +W+S ++ NG+G+K +++F M GV+P+ ++F++VL
Sbjct: 290 DMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLR 349
Query: 275 ACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGP 334
CS G V+EG+ F+SM +++ I P +EHY C+VDL RA RL++A+ +I+ MP +P
Sbjct: 350 GCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHA 409
Query: 335 TVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLM 394
VW SLL + R++ N EL AS + ELE N G YVLL++IYA++ W +V VR+ M
Sbjct: 410 AVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSM 469
Query: 395 GKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVH 454
+ ++K PGCS +EV +++ F ++ +P+ ++ A+ +S ++ GY T V
Sbjct: 470 KSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVM 529
Query: 455 YDLDEGEKERILLGHSEKLAVAFGLINTVKGETIRITKNLRLCEDCHAFTKFISKFANRE 514
+D+DE EKE L HSEK A+AFG+++ + IRI KNLR+C DCH + ISK NRE
Sbjct: 530 FDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNRE 589
Query: 515 ILVRDVNRFHCFRDGVCSCGEYW 537
I+VRD NRFH F+DG CSC +W
Sbjct: 590 IIVRDRNRFHHFKDGHCSCNGFW 612
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 107/257 (41%), Gaps = 46/257 (17%)
Query: 6 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 65
G + ARK+F+ ER WNA A VG E L ++ M G+ + VL
Sbjct: 188 GDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVL 247
Query: 66 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA 125
AC + L +G+ H+ I R+ + + + TTL+D+YAK G + A VF M
Sbjct: 248 SACT----QLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEE 303
Query: 126 KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXX 185
KN +WS+ + A N K LELF M + PN+VT VSV
Sbjct: 304 KNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGV--TPNAVTFVSVL------------- 348
Query: 186 XVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN-----PDVVSWNSLISM 240
RG + G + G+R FD ++N P + + L+ +
Sbjct: 349 --------RGCSVV--------------GFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDL 386
Query: 241 YGNNGYGKKAIQIFENM 257
Y G + A+ I + M
Sbjct: 387 YARAGRLEDAVSIIQQM 403
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 128/293 (43%), Gaps = 35/293 (11%)
Query: 82 KEIHANILRHGYEENIHVMTTLLDVYA--KFGCISYANSVFRAMPAKNSVSWSAMIGCYA 139
++IHA + G ++ H++ + A + YAN + + ++MI +
Sbjct: 23 RQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHC 82
Query: 140 KNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSI 199
K+ +P K+ + + +++ D P++ T+ + VHG +RRG D+
Sbjct: 83 KSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDND 142
Query: 200 MPVINALITMY-------------------------------GRCGEISIGERVFDKVKN 228
V LI++Y RCG++ ++F+ +
Sbjct: 143 PHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPE 202
Query: 229 PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKIL 288
D ++WN++IS Y G ++A+ +F M +GV + ++ I+VL AC+ G +++G+
Sbjct: 203 RDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGR-W 261
Query: 289 FESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 341
S + + +I + +VDL + +++A+++ M E W S L
Sbjct: 262 AHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGME-EKNVYTWSSAL 313
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 75/138 (54%), Gaps = 8/138 (5%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y + G ++ A +VF E+ +Y W++ LAM G GE+ LEL+ M G+ + T
Sbjct: 284 LYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVT 343
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRH--GYEENIHVMTTLLDVYAKFGCISYANS 118
+ VL+ C V F + +G+ H + +R+ G E + L+D+YA+ G + A S
Sbjct: 344 FVSVLRGCSVVGF----VDEGQR-HFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVS 398
Query: 119 VFRAMPAK-NSVSWSAMI 135
+ + MP K ++ WS+++
Sbjct: 399 IIQQMPMKPHAAVWSSLL 416
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/535 (37%), Positives = 314/535 (58%), Gaps = 8/535 (1%)
Query: 5 LGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYV 64
+G + AR+VFDE + I++WN F+ E L LY++M G+ D FTY +V
Sbjct: 56 IGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFV 115
Query: 65 LKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP 124
+KA +S+ + G +HA+++++G+ V T L+ +Y KFG +S A +F +M
Sbjct: 116 VKA--ISQLGDFSC--GFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQ 171
Query: 125 AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXX 184
K+ V+W+A + + ALE F++M +A +S T+VS+
Sbjct: 172 VKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQF--DSFTVVSMLSACGQLGSLEIG 229
Query: 185 XXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNN 244
++ + +D + V NA + M+ +CG +F+++K +VVSW+++I Y N
Sbjct: 230 EEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMN 289
Query: 245 GYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESML--SKYRIHPGM 302
G ++A+ +F M ++G+ P+Y++F+ VL ACSHAGLV EGK F M+ + + P
Sbjct: 290 GDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRK 349
Query: 303 EHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFE 362
EHYACMVDLLGR+ L+EA + I+ MP EP +WG+LLG+C +H + L ++ + +L E
Sbjct: 350 EHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVE 409
Query: 363 LEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEE 422
P +VLL++IYA A W V VR M K +KV S +E + KI+ F ++
Sbjct: 410 TAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDK 469
Query: 423 DNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLINT 482
+PQ + + L ++ ++++ GY P T V +D++ EKE L HSEKLA+AFGLI
Sbjct: 470 SHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKG 529
Query: 483 VKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
G IR+ KNLR C+DCHAF+KF+S + EI++RD NRFH FR+GVCSC E+W
Sbjct: 530 RPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 98/209 (46%), Gaps = 2/209 (0%)
Query: 82 KEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKN 141
K+IHA +LR G+ E ++T LL+ G + YA VF M W+ + Y +N
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 142 DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMP 201
+P ++L L+ +M P+ T V +H +++ G +
Sbjct: 88 QLPFESLLLYKKM--RDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGI 145
Query: 202 VINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG 261
V L+ MY + GE+S E +F+ ++ D+V+WN+ +++ G A++ F M
Sbjct: 146 VATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADA 205
Query: 262 VSPSYISFITVLCACSHAGLVEEGKILFE 290
V + +++L AC G +E G+ +++
Sbjct: 206 VQFDSFTVVSMLSACGQLGSLEIGEEIYD 234
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 97/242 (40%), Gaps = 10/242 (4%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G L A +F+ + + + WNAF G LE + +M + D FT
Sbjct: 153 MYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFT 212
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+L AC + L+ G+EI+ + + NI V LD++ K G A +F
Sbjct: 213 VVSMLSACG----QLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLF 268
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
M +N VSWS MI YA N +AL LF M E PN VT + V
Sbjct: 269 EEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLR--PNYVTFLGVLSACSHAGL 326
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNS 236
+++ ++ P M G + E ++ +K PD W +
Sbjct: 327 VNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGA 386
Query: 237 LI 238
L+
Sbjct: 387 LL 388
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 11/149 (7%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
M+ + G+ + AR +F+E ++R + W+ AM G E L L+ M G+ + T
Sbjct: 254 MHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVT 313
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHV----MTTLLDVYAKFGCISYA 116
+ VL AC + + +GK + +++ ++N+ ++D+ + G + A
Sbjct: 314 FLGVLSACSHAGL----VNEGKR-YFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEA 368
Query: 117 NSVFRAMPAKNSVS-WSAMIG-CYAKNDM 143
+ MP + W A++G C DM
Sbjct: 369 YEFIKKMPVEPDTGIWGALLGACAVHRDM 397
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/571 (34%), Positives = 315/571 (55%), Gaps = 39/571 (6%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVG-RGEELLELYRQMNWSGIPSDRF 59
+Y + G+ A +VFDE R W + AL G+ L + SG+ D F
Sbjct: 47 VYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDF 106
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
++ ++KAC ++ + G+++H + + Y + V ++L+D+YAK G ++ A +V
Sbjct: 107 VFSALVKACA----NLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAV 162
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFH--------------------------- 152
F ++ KN++SW+AM+ YAK+ +ALELF
Sbjct: 163 FDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAF 222
Query: 153 ----QMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALIT 208
+M E D I + + + S+ VHG ++ G DS + + NALI
Sbjct: 223 SVFTEMRRERVD-ILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALID 281
Query: 209 MYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYIS 268
MY +C ++ + +F ++++ DVVSW SLI +G +KA+ ++++M+ GV P+ ++
Sbjct: 282 MYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVT 341
Query: 269 FITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 328
F+ ++ ACSH G VE+G+ LF+SM Y I P ++HY C++DLLGR+ LDEA LI M
Sbjct: 342 FVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTM 401
Query: 329 PFEPGPTVWGSLLGSCRIHCNAELAER-ASAMLFELEPWNAGNYVLLADIYAEAKMWSDV 387
PF P W +LL +C+ ++ R A ++ + + Y+LL++IYA A +W V
Sbjct: 402 PFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKV 461
Query: 388 KSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMK-EQGY 446
R+ +G+ ++K PG S +EV+K+ F + E +P E + LL KL EM+ GY
Sbjct: 462 SEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGY 521
Query: 447 APQTNIVHYDLDEGEKERILLGHSEKLAVAFGLINTVKGETIRITKNLRLCEDCHAFTKF 506
P T+ + +D+DE EKE++L HSE+ AVA+GL+ V G IRI KNLR+C DCH K
Sbjct: 522 VPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKH 581
Query: 507 ISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
IS+ REI+VRD R+H F+ G CSC ++W
Sbjct: 582 ISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 129/284 (45%), Gaps = 41/284 (14%)
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
Y + L+ C + L K +HA+I++ G + + TL++VY K G S+A VF
Sbjct: 6 YLHQLQLCARNR----TLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVF 61
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
MP ++ ++W++++ + ++ K L +F + + P+ ++
Sbjct: 62 DEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLR-PDDFVFSALVKACANLGS 120
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
VH + + V ++L+ MY +CG ++ + VFD ++ + +SW +++S
Sbjct: 121 IDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSG 180
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
Y +G ++A+++F + + + S+ + I+ G V+ GK
Sbjct: 181 YAKSGRKEEALELFRILPVKNLY-SWTALIS--------GFVQSGK-------------- 217
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSC 344
G+E ++ ++ R R+D I D P V S++G+C
Sbjct: 218 GLEAFSVFTEM--RRERVD-----ILD------PLVLSSIVGAC 248
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 367 bits (943), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/579 (34%), Positives = 319/579 (55%), Gaps = 54/579 (9%)
Query: 7 SLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLEL---YRQMNWSGIPSDRFTYTY 63
LD A K+F++ +R + WN R + + L+ + Y M+ + +RFT+
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 64 VLKACVVSEFSVYPLQKGKEIHANILRHGY------------------------------ 93
VLKAC +Q+GK+IH L++G+
Sbjct: 134 VLKACA----KTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKN 189
Query: 94 --EENIHVMT-------------TLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCY 138
E+++ VMT ++D Y + G A +F M ++ VSW+ MI Y
Sbjct: 190 IIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGY 249
Query: 139 AKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDS 198
+ N A+E+F +M + D PN VT+VSV +H + G+
Sbjct: 250 SLNGFFKDAVEVFREM--KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRI 307
Query: 199 IMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMI 258
+ +ALI MY +CG I VF+++ +V++W+++I+ + +G AI F M
Sbjct: 308 DDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMR 367
Query: 259 HQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRL 318
GV PS +++I +L ACSH GLVEEG+ F M+S + P +EHY CMVDLLGR+ L
Sbjct: 368 QAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLL 427
Query: 319 DEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIY 378
DEA + I +MP +P +W +LLG+CR+ N E+ +R + +L ++ P ++G YV L+++Y
Sbjct: 428 DEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMY 487
Query: 379 AEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLS 438
A WS+V +R M ++ ++K PGCS I++ ++ FV ++ +P+ +++ ++L+++S
Sbjct: 488 ASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEIS 547
Query: 439 TEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLINTVKGETIRITKNLRLCE 498
+++ GY P T V +L+E +KE +L HSEK+A AFGLI+T G+ IRI KNLR+CE
Sbjct: 548 DKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICE 607
Query: 499 DCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
DCH+ K ISK R+I VRD RFH F+DG CSC +YW
Sbjct: 608 DCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 135/320 (42%), Gaps = 56/320 (17%)
Query: 83 EIHANILRHGYEENIHVMTTLLDVYAKFGC----ISYANSVFRAMPAKNSVSWSAMIGCY 138
+IHA ++ G + +L A + YA+ +F MP +N SW+ +I +
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100
Query: 139 AKN--DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFIL---- 192
+++ D + A+ LF++M+ + PN T SV +HG L
Sbjct: 101 SESDEDKALIAITLFYEMMSDEFVE-PNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGF 159
Query: 193 -----------------------------------------RRGLDSIMPVINALITMYG 211
RR D + + N +I Y
Sbjct: 160 GGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYM 219
Query: 212 RCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFIT 271
R G+ +FDK++ VVSWN++IS Y NG+ K A+++F M + P+Y++ ++
Sbjct: 220 RLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVS 279
Query: 272 VLCACSHAGLVEEGKIL-FESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPF 330
VL A S G +E G+ L + S RI + + ++D+ + +++AI + E +P
Sbjct: 280 VLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG--SALIDMYSKCGIIEKAIHVFERLPR 337
Query: 331 EPGPTVWGSLLGSCRIHCNA 350
E T W +++ IH A
Sbjct: 338 ENVIT-WSAMINGFAIHGQA 356
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 126/284 (44%), Gaps = 34/284 (11%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y LG AR +FD+ R+R++ WN ++ G ++ +E++R+M I + T
Sbjct: 218 YMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTL 277
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
VL A +S L+ G+ +H G + + + L+D+Y+K G I A VF
Sbjct: 278 VSVLPA--ISRLG--SLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFE 333
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
+P +N ++WSAMI +A + A++ F +M P+ V +++
Sbjct: 334 RLPRENVITWSAMINGFAIHGQAGDAIDCFCKM--RQAGVRPSDVAYINLLTACS----- 386
Query: 182 XXXXXVHGFILRRG---------LDSIMPVI---NALITMYGRCGEISIGER-VFDKVKN 228
HG ++ G +D + P I ++ + GR G + E + +
Sbjct: 387 ------HGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIK 440
Query: 229 PDVVSWNSLIS---MYGNNGYGKKAIQIFENMIHQGVSPSYISF 269
PD V W +L+ M GN GK+ I +M+ S +Y++
Sbjct: 441 PDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHD-SGAYVAL 483
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/542 (36%), Positives = 306/542 (56%), Gaps = 32/542 (5%)
Query: 6 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 65
G +D AR++FDE ER++ W R ++ +++ M ++T +L
Sbjct: 186 GRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP----EKTEVSWTSML 241
Query: 66 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVM--------TTLLDVYAKFGCISYAN 117
V Q G+ A EE VM ++ + G I+ A
Sbjct: 242 MGYV---------QNGRIEDA-------EELFEVMPVKPVIACNAMISGLGQKGEIAKAR 285
Query: 118 SVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXX 177
VF +M +N SW +I + +N ++AL+LF ++++ P T++S+
Sbjct: 286 RVFDSMKERNDASWQTVIKIHERNGFELEALDLF--ILMQKQGVRPTFPTLISILSVCAS 343
Query: 178 XXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSL 237
VH ++R D + V + L+TMY +CGE+ + +FD+ + D++ WNS+
Sbjct: 344 LASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSI 403
Query: 238 ISMYGNNGYGKKAIQIFENMIHQG-VSPSYISFITVLCACSHAGLVEEGKILFESMLSKY 296
IS Y ++G G++A+++F M G P+ ++F+ L ACS+AG+VEEG ++ESM S +
Sbjct: 404 ISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVF 463
Query: 297 RIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERA 356
+ P HYACMVD+LGRA R +EA+++I+ M EP VWGSLLG+CR H ++AE
Sbjct: 464 GVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFC 523
Query: 357 SAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYS 416
+ L E+EP N+G Y+LL+++YA W+DV +RKLM R+++K PGCSW EV+ K+++
Sbjct: 524 AKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHA 583
Query: 417 FVSSE-EDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAV 475
F +P+ E + +L +L ++E GY P + +D+DE EK L HSE+LAV
Sbjct: 584 FTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAV 643
Query: 476 AFGLINTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGE 535
A+ L+ +G IR+ KNLR+C DCH K ISK REI++RD NRFH FR+G CSC +
Sbjct: 644 AYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKD 703
Query: 536 YW 537
YW
Sbjct: 704 YW 705
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 138/351 (39%), Gaps = 82/351 (23%)
Query: 5 LGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM------NWSGIPSDR 58
+G + ARK+FD ++I WN+ + +L+ +M +W+G+ S
Sbjct: 30 IGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGY 89
Query: 59 FTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANS 118
+ +A V F + P E N+ T L+ Y G + A S
Sbjct: 90 MKNGEIDEARKV--FDLMP----------------ERNVVSWTALVKGYVHNGKVDVAES 131
Query: 119 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
+F MP KN VSW+ M+ + ++ A +L+ + IP+ +
Sbjct: 132 LFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY--------EMIPDKDNIART------- 176
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
+HG + G + +FD++ V++W +++
Sbjct: 177 ------SMIHGLC--------------------KEGRVDEAREIFDEMSERSVITWTTMV 210
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 298
+ YG N A +IF+ M + + +S+ ++L G +E+ + LFE M K I
Sbjct: 211 TGYGQNNRVDDARKIFDVMPEK----TEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVI 266
Query: 299 HPGMEHYAC--MVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 347
AC M+ LG+ + +A ++ + M E W +++ +IH
Sbjct: 267 -------ACNAMISGLGQKGEIAKARRVFDSMK-ERNDASWQTVI---KIH 306
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 117/306 (38%), Gaps = 78/306 (25%)
Query: 88 ILRHGYEENIHVMTTLLDV--YAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPV 145
+LR Y I T + + ++ G I A +F + +K+ SW++M+ Y N MP
Sbjct: 6 LLRRTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPR 65
Query: 146 KALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINA 205
A +LF +M D + N
Sbjct: 66 DARKLFDEMP-----------------------------------------DRNIISWNG 84
Query: 206 LITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPS 265
L++ Y + GEI +VFD + +VVSW +L+ Y +NG + + E++ + +
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNG----KVDVAESLFWKMPEKN 140
Query: 266 YISFITVLCACSHAGLVEEGKILFESMLSKYRI-HPGMEHYAC----------------- 307
+S+ +L G +++ L+E + K I M H C
Sbjct: 141 KVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSE 200
Query: 308 --------MVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAM 359
MV G+ NR+D+A K+ + MP E W S+L + E AE
Sbjct: 201 RSVITWTTMVTGYGQNNRVDDARKIFDVMP-EKTEVSWTSMLMGYVQNGRIEDAEE---- 255
Query: 360 LFELEP 365
LFE+ P
Sbjct: 256 LFEVMP 261
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/568 (35%), Positives = 313/568 (55%), Gaps = 38/568 (6%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + ++D A+++FDE + + NA G E L ++ M SG+ DR +
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKF---------- 110
+ +C + + GK H +LR+G+E ++ L+D+Y K
Sbjct: 340 MLSAISSCS----QLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 111 ---------------------GCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALE 149
G + A F MP KN VSW+ +I + + +A+E
Sbjct: 396 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 455
Query: 150 LFHQMVLEACDSI-PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALIT 208
+F M ++ + + + VTM+S+ ++ +I + G+ + + L+
Sbjct: 456 VFCSM--QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVD 513
Query: 209 MYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYIS 268
M+ RCG+ +F+ + N DV +W + I G ++AI++F++MI QG+ P ++
Sbjct: 514 MFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVA 573
Query: 269 FITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 328
F+ L ACSH GLV++GK +F SML + + P HY CMVDLLGRA L+EA++LIEDM
Sbjct: 574 FVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDM 633
Query: 329 PFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVK 388
P EP +W SLL +CR+ N E+A A+ + L P G+YVLL+++YA A W+D+
Sbjct: 634 PMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMA 693
Query: 389 SVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKEQGYAP 448
VR M ++ L+K PG S I+++ K + F S +E +P++ + A+L ++S G+ P
Sbjct: 694 KVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVP 753
Query: 449 QTNIVHYDLDEGEKERILLGHSEKLAVAFGLINTVKGETIRITKNLRLCEDCHAFTKFIS 508
+ V D+DE EK +L HSEKLA+A+GLI++ KG TIRI KNLR+C DCH+F KF S
Sbjct: 754 DLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFAS 813
Query: 509 KFANREILVRDVNRFHCFRDGVCSCGEY 536
K NREI++RD NRFH R G CSCG++
Sbjct: 814 KVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 175/347 (50%), Gaps = 19/347 (5%)
Query: 4 ELG---SLDCARKVFDETRE-RTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRF 59
ELG SL A++VF+ + T +++N+ R A G E + L+ +M SGI D++
Sbjct: 76 ELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKY 135
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
T+ + L AC S G +IH I++ GY +++ V +L+ YA+ G + A V
Sbjct: 136 TFPFGLSACAKSRAK----GNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKV 191
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F M +N VSW++MI YA+ D A++LF +MV + + PNSVTMV V
Sbjct: 192 FDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDE-EVTPNSVTMVCVISACAKLE 250
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
V+ FI G++ +++AL+ MY +C I + +R+FD+ ++ N++ S
Sbjct: 251 DLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMAS 310
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
Y G ++A+ +F M+ GV P IS ++ + +CS IL+ Y +
Sbjct: 311 NYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL-----RNILWGKSCHGYVLR 365
Query: 300 PGMEHYA----CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLG 342
G E + ++D+ + +R D A ++ + M + T W S++
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVT-WNSIVA 411
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 143/295 (48%), Gaps = 11/295 (3%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y E G LD ARKVFDE ER + W + A ++ ++L+ +M + + T
Sbjct: 179 YAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM----VRDEEVTP 234
Query: 62 TYVLKACVVSEFS-VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
V CV+S + + L+ G++++A I G E N +++ L+D+Y K I A +F
Sbjct: 235 NSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLF 294
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
A N +AM Y + + +AL +F+ M+ P+ ++M+S
Sbjct: 295 DEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR--PDRISMLSAISSCSQLRN 352
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
HG++LR G +S + NALI MY +C R+FD++ N VV+WNS+++
Sbjct: 353 ILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAG 412
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSK 295
Y NG A + FE M + + +S+ T++ L EE +F SM S+
Sbjct: 413 YVENGEVDAAWETFETMPEKNI----VSWNTIISGLVQGSLFEEAIEVFCSMQSQ 463
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/568 (35%), Positives = 313/568 (55%), Gaps = 41/568 (7%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y G + + +F +T + ++++ A ++ G ++ LY Q+ S I + FT+
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
+ +LK+C + GK IH ++L+ G + +V T L+DVYAK G + A VF
Sbjct: 134 SSLLKSCST--------KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFD 185
Query: 122 AMPAKNSVSWSAMIGCYAK-------------------------------NDMPVKALEL 150
MP ++ VS +AMI CYAK + P AL L
Sbjct: 186 RMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALML 245
Query: 151 FHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMY 210
F +++ E P+ +T+V+ +H F+ + + V LI MY
Sbjct: 246 FQKLLAEG-KPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMY 304
Query: 211 GRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIH-QGVSPSYISF 269
+CG + VF+ D+V+WN++I+ Y +GY + A+++F M G+ P+ I+F
Sbjct: 305 SKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITF 364
Query: 270 ITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMP 329
I L AC+HAGLV EG +FESM +Y I P +EHY C+V LLGRA +L A + I++M
Sbjct: 365 IGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMN 424
Query: 330 FEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKS 389
+ +W S+LGSC++H + L + + L L N+G YVLL++IYA + V
Sbjct: 425 MDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAK 484
Query: 390 VRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKEQGYAPQ 449
VR LM ++ + K PG S IE++ K++ F + + ++ + +++ +L K+S +K GY P
Sbjct: 485 VRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPN 544
Query: 450 TNIVHYDLDEGEKERILLGHSEKLAVAFGLINTVKGETIRITKNLRLCEDCHAFTKFISK 509
TN V DL+E EKE+ L HSE+LA+A+GLI+T G ++I KNLR+C DCH TK ISK
Sbjct: 545 TNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISK 604
Query: 510 FANREILVRDVNRFHCFRDGVCSCGEYW 537
R+I++RD NRFH F DG CSCG++W
Sbjct: 605 ITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 121/301 (40%), Gaps = 72/301 (23%)
Query: 1 MYHELGSLDCARKVFDETRERT-------------------------------IYIWNAF 29
+Y + G + A+KVFD ER+ I WN
Sbjct: 170 VYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVM 229
Query: 30 FRALAMVGRGEELLELYRQMNWSGIPS-DRFTYTYVLKACVVSEFSVYPLQKGKEIHANI 88
A G + L L++++ G P D T L AC + L+ G+ IH +
Sbjct: 230 IDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACS----QIGALETGRWIHVFV 285
Query: 89 LRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKAL 148
N+ V T L+D+Y+K G + A VF P K+ V+W+AMI YA + AL
Sbjct: 286 KSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDAL 345
Query: 149 ELFHQMVLEACDSI-PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD---------S 198
LF++M + + P +T + H ++ G+
Sbjct: 346 RLFNEM--QGITGLQPTDITFIGT-----------LQACAHAGLVNEGIRIFESMGQEYG 392
Query: 199 IMPVI---NALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLIS---MYGNNGYGK 248
I P I L+++ GR G++ +R ++ +KN D V W+S++ ++G+ GK
Sbjct: 393 IKPKIEHYGCLVSLLGRAGQL---KRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGK 449
Query: 249 K 249
+
Sbjct: 450 E 450
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/538 (36%), Positives = 302/538 (56%), Gaps = 12/538 (2%)
Query: 6 GSLDCARKVFDETRERTIYIWNAFFRA-LAMVGRGEELLELYRQMNWSG-IPSDRFTYTY 63
GS+D RKVFD + ++ W A + E + L+ +M G + + FT++
Sbjct: 319 GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 64 VLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAM 123
KAC ++ + GK++ + G N V +++ ++ K + A F ++
Sbjct: 379 AFKACG----NLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESL 434
Query: 124 PAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXX 183
KN VS++ + +N +A +L ++ ++ T S+
Sbjct: 435 SEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELG--VSAFTFASLLSGVANVGSIRK 492
Query: 184 XXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGN 243
+H +++ GL PV NALI+MY +CG I RVF+ ++N +V+SW S+I+ +
Sbjct: 493 GEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAK 552
Query: 244 NGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGME 303
+G+ + ++ F MI +GV P+ ++++ +L ACSH GLV EG F SM ++I P ME
Sbjct: 553 HGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKME 612
Query: 304 HYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFEL 363
HYACMVDLL RA L +A + I MPF+ VW + LG+CR+H N EL + A+ + EL
Sbjct: 613 HYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEL 672
Query: 364 EPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEED 423
+P Y+ L++IYA A W + +R+ M +R L K GCSWIEV KI+ F +
Sbjct: 673 DPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTA 732
Query: 424 NPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDL----DEGEKERILLGHSEKLAVAFGL 479
+P ++ L +L TE+K GY P T++V + L DE EKER+L HSEK+AVAFGL
Sbjct: 733 HPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGL 792
Query: 480 INTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
I+T K +R+ KNLR+C DCH K+IS + REI++RD+NRFH F+DG CSC +YW
Sbjct: 793 ISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 133/284 (46%), Gaps = 11/284 (3%)
Query: 7 SLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLK 66
S + A KVFD+ E + W +G E + + M SG SD+FT + V
Sbjct: 218 SFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFS 277
Query: 67 ACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKF---GCISYANSVFRAM 123
AC E L GK++H+ +R G +++ +L+D+YAK G + VF M
Sbjct: 278 ACAELE----NLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRM 331
Query: 124 PAKNSVSWSAMIGCYAKN-DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXX 182
+ +SW+A+I Y KN ++ +A+ LF +M+ + PN T S
Sbjct: 332 EDHSVMSWTALITGYMKNCNLATEAINLFSEMITQG-HVEPNHFTFSSAFKACGNLSDPR 390
Query: 183 XXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYG 242
V G +RGL S V N++I+M+ + + +R F+ + ++VS+N+ +
Sbjct: 391 VGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTC 450
Query: 243 NNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGK 286
N ++A ++ + + + S +F ++L ++ G + +G+
Sbjct: 451 RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGE 494
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 169/357 (47%), Gaps = 23/357 (6%)
Query: 1 MYHELGSLDCARKVFDETR---ERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSD 57
+Y + G A VF+ R +R + W+A GR + ++++ + G+ +
Sbjct: 106 LYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPN 165
Query: 58 RFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHG-YEENIHVMTTLLDVYAKFGCISYA 116
+ YT V++AC S+F + G+ +++ G +E ++ V +L+D++ K G S+
Sbjct: 166 DYCYTAVIRACSNSDF----VGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK-GENSFE 220
Query: 117 NS--VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXX 174
N+ VF M N V+W+ MI + P +A+ F MVL +S + T+ SV
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFES--DKFTLSSVFSA 278
Query: 175 XXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRC---GEISIGERVFDKVKNPDV 231
+H + +R GL + V +L+ MY +C G + +VFD++++ V
Sbjct: 279 CAELENLSLGKQLHSWAIRSGL--VDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSV 336
Query: 232 VSWNSLISMYGNN-GYGKKAIQIFENMIHQG-VSPSYISFITVLCACSHAGLVEEGKILF 289
+SW +LI+ Y N +AI +F MI QG V P++ +F + AC + GK +
Sbjct: 337 MSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVL 396
Query: 290 ESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL-GSCR 345
K + ++ + +++R+++A + E + E + + L G+CR
Sbjct: 397 GQAF-KRGLASNSSVANSVISMFVKSDRMEDAQRAFESLS-EKNLVSYNTFLDGTCR 451
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 164/359 (45%), Gaps = 36/359 (10%)
Query: 55 PSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCIS 114
P D T++ +LK+C+ + + GK +HA ++ E + + +L+ +Y+K G +
Sbjct: 59 PMDSVTFSSLLKSCIRAR----DFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSA 114
Query: 115 YANSVFRAM---PAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 171
A VF M ++ VSWSAM+ CY N + A+++F + + +PN +V
Sbjct: 115 KAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFL--ELGLVPNDYCYTAV 172
Query: 172 XXXXXXXXXXXXXXXVHGFILRRG-LDSIMPVINALITMYGRCGEISI--GERVFDKVKN 228
GF+++ G +S + V +LI M+ + GE S +VFDK+
Sbjct: 173 IRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK-GENSFENAYKVFDKMSE 231
Query: 229 PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKIL 288
+VV+W +I+ G+ ++AI+ F +M+ G + +V AC+ + GK
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGK-- 289
Query: 289 FESMLSKYRIHPGM-EHYAC-MVDLLGRAN---RLDEAIKLIEDMPFEPGPTVWGSLLGS 343
L + I G+ + C +VD+ + + +D+ K+ + M + W +L+
Sbjct: 290 ---QLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRME-DHSVMSWTALITG 345
Query: 344 CRIHCNAELAERASAMLFEL------EPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGK 396
+CN LA A + E+ EP N+ + + SD + ++++G+
Sbjct: 346 YMKNCN--LATEAINLFSEMITQGHVEP----NHFTFSSAFKACGNLSDPRVGKQVLGQ 398
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 88/171 (51%), Gaps = 6/171 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
M+ + ++ A++ F+ E+ + +N F E+ +L ++ + FT
Sbjct: 417 MFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFT 476
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ +L +V ++KG++IH+ +++ G N V L+ +Y+K G I A+ VF
Sbjct: 477 FASLLSGVA----NVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVF 532
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 171
M +N +SW++MI +AK+ ++ LE F+QM+ E PN VT V++
Sbjct: 533 NFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVK--PNEVTYVAI 581
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 94/204 (46%), Gaps = 9/204 (4%)
Query: 145 VKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVIN 204
V AL+L + + DS VT S+ VH ++ ++ + N
Sbjct: 46 VSALDLMARDGIRPMDS----VTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYN 101
Query: 205 ALITMYGRCGEISIGERVFDKVK---NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG 261
+LI++Y + G+ + E VF+ ++ DVVSW+++++ YGNNG AI++F + G
Sbjct: 102 SLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELG 161
Query: 262 VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRA-NRLDE 320
+ P+ + V+ ACS++ V G++ ++ + ++D+ + N +
Sbjct: 162 LVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFEN 221
Query: 321 AIKLIEDMPFEPGPTVWGSLLGSC 344
A K+ + M E W ++ C
Sbjct: 222 AYKVFDKMS-ELNVVTWTLMITRC 244
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/518 (37%), Positives = 307/518 (59%), Gaps = 11/518 (2%)
Query: 24 YIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKE 83
+++N+ ++ + + + YR+M S + +T+T V+K+C + L+ GK
Sbjct: 73 FLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCA----DLSALRIGKG 128
Query: 84 IHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDM 143
+H + + G+ + +V L+ Y+K G + A VF MP K+ V+W++++ + +N +
Sbjct: 129 VHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGL 188
Query: 144 PVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVI 203
+A+++F+QM + P+S T VS+ VH +I+ GLD + +
Sbjct: 189 ADEAIQVFYQMRESGFE--PDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLG 246
Query: 204 NALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQ-GV 262
ALI +Y RCG++ VFDK+K +V +W ++IS YG +GYG++A+++F M G
Sbjct: 247 TALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGP 306
Query: 263 SPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAI 322
P+ ++F+ VL AC+HAGLVEEG+ +++ M YR+ PG+EH+ CMVD+LGRA LDEA
Sbjct: 307 IPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAY 366
Query: 323 KLIEDMPFE---PGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYA 379
K I + P +W ++LG+C++H N +L + L LEP N G++V+L++IYA
Sbjct: 367 KFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYA 426
Query: 380 EAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLST 439
+ +V +R M + L+K G S IEV+ K Y F +E + + ++ L L +
Sbjct: 427 LSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLIS 486
Query: 440 EMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLINTVKGETIRITKNLRLCED 499
KE GYAP + V + ++E EKE L HSEKLAVAFGL+ TV I I KNLR+CED
Sbjct: 487 RCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKNLRICED 545
Query: 500 CHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
CH+ K+IS +NR+I VRD RFH F++G CSC +YW
Sbjct: 546 CHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 156/329 (47%), Gaps = 15/329 (4%)
Query: 82 KEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKN 141
+++HA+++ GY + ++T L+ + I+Y + +F ++P + ++++I +K
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85
Query: 142 DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMP 201
+P+ + + +M+ + + P++ T SV VH + G
Sbjct: 86 RLPLHCVAYYRRML--SSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTY 143
Query: 202 VINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG 261
V AL+T Y +CG++ +VFD++ +V+WNSL+S + NG +AIQ+F M G
Sbjct: 144 VQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESG 203
Query: 262 VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHY----ACMVDLLGRANR 317
P +F+++L AC+ G V G S + +Y I G++ +++L R
Sbjct: 204 FEPDSATFVSLLSACAQTGAVSLG-----SWVHQYIISEGLDLNVKLGTALINLYSRCGD 258
Query: 318 LDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA-ERASAMLFELEPW-NAGNYVLLA 375
+ +A ++ + M E W +++ + H + A E + M + P N +V +
Sbjct: 259 VGKAREVFDKMK-ETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVL 317
Query: 376 DIYAEAKMWSDVKSVRKLMGKRVLQKVPG 404
A A + + +SV K M K + +PG
Sbjct: 318 SACAHAGLVEEGRSVYKRMTKS-YRLIPG 345
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 91/170 (53%), Gaps = 5/170 (2%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y + G ++ AR+VFD E++I WN+ G +E ++++ QM SG D T+
Sbjct: 152 YSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATF 211
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
+L AC + + G +H I+ G + N+ + T L+++Y++ G + A VF
Sbjct: 212 VSLLSACAQTG----AVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFD 267
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 171
M N +W+AMI Y + +A+ELF++M + C IPN+VT V+V
Sbjct: 268 KMKETNVAAWTAMISAYGTHGYGQQAVELFNKME-DDCGPIPNNVTFVAV 316
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/538 (35%), Positives = 300/538 (55%), Gaps = 7/538 (1%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y + G + AR VF+ + WN+ G E ++L++ M +D T
Sbjct: 351 VYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHIT 410
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
Y ++ + L+ GK +H+N ++ G ++ V L+D+YAK G + + +F
Sbjct: 411 YLMLISVST----RLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIF 466
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+M ++V+W+ +I + L++ QM + +P+ T +
Sbjct: 467 SSMGTGDTVTWNTVISACVRFGDFATGLQVTTQM--RKSEVVPDMATFLVTLPMCASLAA 524
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+H +LR G +S + + NALI MY +CG + RVF+++ DVV+W +I
Sbjct: 525 KRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYA 584
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
YG G G+KA++ F +M G+ P + FI ++ ACSH+GLV+EG FE M + Y+I P
Sbjct: 585 YGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDP 644
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
+EHYAC+VDLL R+ ++ +A + I+ MP +P ++W S+L +CR + E AER S +
Sbjct: 645 MIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRI 704
Query: 361 FELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 420
EL P + G +L ++ YA + W V +RK + + + K PG SWIEV K ++ F S
Sbjct: 705 IELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSG 764
Query: 421 EEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDL-DEGEKERILLGHSEKLAVAFGL 479
++ PQ E + L L + M ++GY P V +L +E EK R++ GHSE+LA+AFGL
Sbjct: 765 DDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGL 824
Query: 480 INTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
+NT G +++ KNLR+C DCH TK ISK REILVRD NRFH F+DG CSC + W
Sbjct: 825 LNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 153/287 (53%), Gaps = 10/287 (3%)
Query: 7 SLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLK 66
SL R+V + + +Y+WN+ RA + G E LE Y ++ S + D++T+ V+K
Sbjct: 58 SLSVFRRV---SPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIK 114
Query: 67 ACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK 126
AC ++ + G ++ IL G+E ++ V L+D+Y++ G ++ A VF MP +
Sbjct: 115 ACA----GLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR 170
Query: 127 NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXX 186
+ VSW+++I Y+ + +ALE++H+ L+ +P+S T+ SV
Sbjct: 171 DLVSWNSLISGYSSHGYYEEALEIYHE--LKNSWIVPDSFTVSSVLPAFGNLLVVKQGQG 228
Query: 187 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 246
+HGF L+ G++S++ V N L+ MY + + RVFD++ D VS+N++I Y
Sbjct: 229 LHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEM 288
Query: 247 GKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESML 293
++++++F + Q P ++ +VL AC H + K ++ ML
Sbjct: 289 VEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYML 334
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 172/346 (49%), Gaps = 13/346 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY +G L AR+VFDE R + WN+ + G EE LE+Y ++ S I D FT
Sbjct: 150 MYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFT 209
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ VL A ++ +++G+ +H L+ G + V L+ +Y KF + A VF
Sbjct: 210 VSSVLPAF----GNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVF 265
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI-PNSVTMVSVXXXXXXXX 179
M ++SVS++ MI Y K +M +++ +F LE D P+ +T+ SV
Sbjct: 266 DEMDVRDSVSYNTMICGYLKLEMVEESVRMF----LENLDQFKPDLLTVSSVLRACGHLR 321
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
++ ++L+ G V N LI +Y +CG++ VF+ ++ D VSWNS+IS
Sbjct: 322 DLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIIS 381
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
Y +G +A+++F+ M+ +I+++ ++ + ++ GK L + + K I
Sbjct: 382 GYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGI-KSGIC 440
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTV-WGSLLGSC 344
+ ++D+ + + +++K+ M G TV W +++ +C
Sbjct: 441 IDLSVSNALIDMYAKCGEVGDSLKIFSSMG--TGDTVTWNTVISAC 484
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 114/212 (53%), Gaps = 3/212 (1%)
Query: 78 LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAM-PAKNSVSWSAMIG 136
L + + IHA ++ G + + L+D Y+ F + + SVFR + PAKN W+++I
Sbjct: 20 LNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIR 79
Query: 137 CYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGL 196
++KN + +ALE + + L P+ T SV V+ IL G
Sbjct: 80 AFSKNGLFPEALEFYGK--LRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGF 137
Query: 197 DSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFEN 256
+S + V NAL+ MY R G ++ +VFD++ D+VSWNSLIS Y ++GY ++A++I+
Sbjct: 138 ESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHE 197
Query: 257 MIHQGVSPSYISFITVLCACSHAGLVEEGKIL 288
+ + + P + +VL A + +V++G+ L
Sbjct: 198 LKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGL 229
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/538 (34%), Positives = 308/538 (57%), Gaps = 7/538 (1%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y +LG + A KVF+E + + W+ G E ++L+ +M + + + FT
Sbjct: 291 LYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFT 350
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ +L C + + S G+++H +++ G++ +I+V L+DVYAK + A +F
Sbjct: 351 LSSILNGCAIGKCSGL----GEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLF 406
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+ +KN VSW+ +I Y KA +F + + VT S
Sbjct: 407 AELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSV--TEVTFSSALGACASLAS 464
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
VHG ++ + V N+LI MY +CG+I + VF++++ DV SWN+LIS
Sbjct: 465 MDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISG 524
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
Y +G G++A++I + M + P+ ++F+ VL CS+AGL+++G+ FESM+ + I P
Sbjct: 525 YSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEP 584
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
+EHY CMV LLGR+ +LD+A+KLIE +P+EP +W ++L + N E A R++ +
Sbjct: 585 CLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEI 644
Query: 361 FELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 420
++ P + YVL++++YA AK W++V S+RK M + ++K PG SWIE + ++ F
Sbjct: 645 LKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVG 704
Query: 421 EEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLI 480
D+P ++ + +L L+ + GY P N V D+D+ EK++ L HSE+LA+A+GL+
Sbjct: 705 LSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLV 764
Query: 481 NTVKGET-IRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
I I KNLR+C DCH+ K IS R++++RD+NRFH F GVCSCG++W
Sbjct: 765 RMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 136/284 (47%), Gaps = 6/284 (2%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y GS+D AR VF+ + I +W G E+ L+L M +G + +T+
Sbjct: 191 YSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTF 250
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
LKA + + KG +H IL+ Y + V LL +Y + G +S A VF
Sbjct: 251 DTALKASI--GLGAFDFAKG--VHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFN 306
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
MP + V WS MI + +N +A++LF +M +PN T+ S+
Sbjct: 307 EMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM--REAFVVPNEFTLSSILNGCAIGKCS 364
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY 241
+HG +++ G D + V NALI +Y +C ++ ++F ++ + + VSWN++I Y
Sbjct: 365 GLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGY 424
Query: 242 GNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEG 285
N G G KA +F + VS + ++F + L AC+ ++ G
Sbjct: 425 ENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLG 468
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 119/282 (42%), Gaps = 22/282 (7%)
Query: 54 IPS-DRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGC 112
IP D Y +L+ C+ + K IH +IL+ G ++ LL+ Y K G
Sbjct: 44 IPGLDSHAYGAMLRRCIQKNDPI----SAKAIHCDILKKGSCLDLFATNILLNAYVKAGF 99
Query: 113 ISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVX 172
A ++F MP +N+VS+ + YA D P+ H+ E + P+ T S
Sbjct: 100 DKDALNLFDEMPERNNVSFVTLAQGYACQD-PIGLYSRLHR---EGHELNPHVFT--SFL 153
Query: 173 XXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVV 232
+H I++ G DS V ALI Y CG + VF+ + D+V
Sbjct: 154 KLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIV 213
Query: 233 SWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVE-----EGKI 287
W ++S Y NGY + ++++ M G P+ +F T L A G + G+I
Sbjct: 214 VWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQI 273
Query: 288 LFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMP 329
L + R+ G ++ L + + +A K+ +MP
Sbjct: 274 LKTCYVLDPRVGVG------LLQLYTQLGDMSDAFKVFNEMP 309
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 361 bits (926), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/535 (37%), Positives = 304/535 (56%), Gaps = 9/535 (1%)
Query: 6 GSLDCARKVFDE-TRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIP-SDRFTYTY 63
GSL A+ +FD + + WN R + + Y +M S + D FT+ +
Sbjct: 53 GSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNF 112
Query: 64 VLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAM 123
LK+C + + K EIH +++R G+ ++ V T+L+ Y+ G + A+ VF M
Sbjct: 113 ALKSCE----RIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEM 168
Query: 124 PAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXX 183
P ++ VSW+ MI C++ + +AL ++ +M E +S T+V++
Sbjct: 169 PVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGV--CGDSYTLVALLSSCAHVSALNM 226
Query: 184 XXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGN 243
+H +S + V NALI MY +CG + VF+ ++ DV++WNS+I YG
Sbjct: 227 GVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGV 286
Query: 244 NGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGME 303
+G+G +AI F M+ GV P+ I+F+ +L CSH GLV+EG FE M S++ + P ++
Sbjct: 287 HGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVK 346
Query: 304 HYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFEL 363
HY CMVDL GRA +L+ ++++I P +W +LLGSC+IH N EL E A L +L
Sbjct: 347 HYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQL 406
Query: 364 EPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEED 423
E +NAG+YVL+ IY+ A S+RKL+ LQ VPG SWIE+ +++ FV ++
Sbjct: 407 EAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKM 466
Query: 424 NPQIEKLRALLIKLSTEMKEQGYAPQ-TNIVHYDLDEGEKERILLGHSEKLAVAFGLINT 482
+P+ + + L ++ GY P+ +N L + HSEKLA+A+GL+ T
Sbjct: 467 HPESAVIYSELGEVINRAILAGYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRT 526
Query: 483 VKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
G T+RITKNLR+C DCH+FTK++SK NREI+VRD RFH F DG+CSC +YW
Sbjct: 527 TAGTTLRITKNLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 12/241 (4%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y GS++ A KVFDE R + WN + VG + L +Y++M G+ D +T
Sbjct: 152 YSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTL 211
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
+L +C V L G +H E + V L+D+YAK G + A VF
Sbjct: 212 VALLSSCA----HVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFN 267
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
M ++ ++W++MI Y + V+A+ F +MV A PN++T + +
Sbjct: 268 GMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMV--ASGVRPNAITFLGL--LLGCSHQG 323
Query: 182 XXXXXVHGFILRRGLDSIMPVI---NALITMYGRCGEISIG-ERVFDKVKNPDVVSWNSL 237
V F + + P + ++ +YGR G++ E ++ + D V W +L
Sbjct: 324 LVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTL 383
Query: 238 I 238
+
Sbjct: 384 L 384
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 202/545 (37%), Positives = 306/545 (56%), Gaps = 26/545 (4%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAM-VGRGEELLELYRQMNWSGIPS-DRFTYTYVLKAC 68
A +VFD + ++WN RA A V R EE LYR+M G S D+ T+ +VLKAC
Sbjct: 102 AFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKAC 161
Query: 69 VVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNS 128
++ +GK++H I++HG+ +++V L+ +Y GC+ A VF MP ++
Sbjct: 162 AY----IFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSL 217
Query: 129 VSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVH 188
VSW++MI + AL+LF +M P+ TM SV H
Sbjct: 218 VSWNSMIDALVRFGEYDSALQLFREMQRSF---EPDGYTMQSVLSACAGLGSLSLGTWAH 274
Query: 189 GFILRR-GLDSIMPVI--NALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNG 245
F+LR+ +D M V+ N+LI MY +CG + + E+VF ++ D+ SWN++I + +G
Sbjct: 275 AFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHG 334
Query: 246 YGKKAIQIFENMI--HQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGME 303
++A+ F+ M+ + V P+ ++F+ +L AC+H G V +G+ F+ M+ Y I P +E
Sbjct: 335 RAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALE 394
Query: 304 HYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSC-RIHCNAELAERASAMLFE 362
HY C+VDL+ RA + EAI ++ MP +P +W SLL +C + + EL+E + +
Sbjct: 395 HYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIG 454
Query: 363 LEPWN-------AGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIY 415
+ N +G YVLL+ +YA A W+DV VRKLM + ++K PGCS IE+ +
Sbjct: 455 TKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISH 514
Query: 416 SFVSSEEDNPQIEKLRALLIKLSTEMKEQGYAP---QTNIVHYDLDEGEKERILLGHSEK 472
F + + +PQ +++ L + ++ GY P Q +V ++G KE L HSE+
Sbjct: 515 EFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDA-TNDGSKEYSLRLHSER 573
Query: 473 LAVAFGLINTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCS 532
LA+AFGLIN IRI KNLR+C DCH TK ISK N EI+VRD RFH F+DG CS
Sbjct: 574 LAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCS 633
Query: 533 CGEYW 537
C +YW
Sbjct: 634 CLDYW 638
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 113/243 (46%), Gaps = 10/243 (4%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y G LD ARKVFDE ER++ WN+ AL G + L+L+R+M S P D +T
Sbjct: 195 LYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEP-DGYT 253
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRH---GYEENIHVMTTLLDVYAKFGCISYAN 117
VL AC + L G HA +LR ++ V +L+++Y K G + A
Sbjct: 254 MQSVLSACA----GLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAE 309
Query: 118 SVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXX 177
VF+ M ++ SW+AMI +A + +A+ F +MV + + PNSVT V +
Sbjct: 310 QVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNH 369
Query: 178 XXXXXXXXXVHGFILRR-GLDSIMPVINALITMYGRCGEISIG-ERVFDKVKNPDVVSWN 235
++R ++ + ++ + R G I+ + V PD V W
Sbjct: 370 RGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWR 429
Query: 236 SLI 238
SL+
Sbjct: 430 SLL 432
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 4/225 (1%)
Query: 82 KEIHANILRHGYEE---NIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCY 138
K++HA LR Y E + + +L + + F ++YA VF ++ +S W+ +I
Sbjct: 65 KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRAC 124
Query: 139 AKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDS 198
A + + + ++ +LE +S P+ T V VH I++ G
Sbjct: 125 AHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGG 184
Query: 199 IMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMI 258
+ V N LI +YG CG + + +VFD++ +VSWNS+I G A+Q+F M
Sbjct: 185 DVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREM- 243
Query: 259 HQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGME 303
+ P + +VL AC+ G + G +L K + M+
Sbjct: 244 QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMD 288
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 358 bits (919), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 197/562 (35%), Positives = 310/562 (55%), Gaps = 38/562 (6%)
Query: 8 LDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA 67
L A +F + + ++++N R + + Y QM S I D T+ +++KA
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA 126
Query: 68 CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYA------------------- 108
E + G++ H+ I+R G++ +++V +L+ +YA
Sbjct: 127 SSEMECVLV----GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRD 182
Query: 109 ------------KFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVL 156
K G + A +F MP +N +WS MI YAKN+ KA++LF M
Sbjct: 183 VVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKR 242
Query: 157 EACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEI 216
E + N MVSV + ++++ + + + AL+ M+ RCG+I
Sbjct: 243 EGV--VANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDI 300
Query: 217 SIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCAC 276
VF+ + D +SW+S+I +G+ KA+ F MI G P ++F VL AC
Sbjct: 301 EKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSAC 360
Query: 277 SHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTV 336
SH GLVE+G ++E+M + I P +EHY C+VD+LGRA +L EA I M +P +
Sbjct: 361 SHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPI 420
Query: 337 WGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGK 396
G+LLG+C+I+ N E+AER ML +++P ++G YVLL++IYA A W ++S+R +M +
Sbjct: 421 LGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKE 480
Query: 397 RVLQKVPGCSWIEVKKKIYSF-VSSEEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHY 455
++++K PG S IE+ KI F + ++ +P++ K+R ++ +++ GY T +
Sbjct: 481 KLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFF 540
Query: 456 DLDEGEKERILLGHSEKLAVAFGLINTVKGETIRITKNLRLCEDCHAFTKFISKFANREI 515
D+DE EKE + HSEKLA+A+G++ T G TIRI KNLR+CEDCH TK IS+ RE+
Sbjct: 541 DVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGREL 600
Query: 516 LVRDVNRFHCFRDGVCSCGEYW 537
+VRD NRFH FR+GVCSC +YW
Sbjct: 601 IVRDRNRFHHFRNGVCSCRDYW 622
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 107/237 (45%), Gaps = 29/237 (12%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y + G ++ AR++FDE R ++ W+ A E+ ++L+ M G+ ++
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
V+ +C + L+ G+ + +++ N+ + T L+D++ + G I A VF
Sbjct: 253 VSVISSCA----HLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFE 308
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
+P +S+SWS++I A + KA+ F QM+ + IP VT +V
Sbjct: 309 GLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMI--SLGFIPRDVTFTAVLSACS----- 361
Query: 182 XXXXXVHGFILRRGLD---------SIMPVI---NALITMYGRCGEISIGERVFDKV 226
HG ++ +GL+ I P + ++ M GR G+++ E K+
Sbjct: 362 ------HGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKM 412
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 356 bits (913), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 195/537 (36%), Positives = 291/537 (54%), Gaps = 13/537 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY GS A K+F + I W ++ ++ YR M+ + D T
Sbjct: 341 MYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEIT 400
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
VL AC ++ L G E+H ++ + V L+++Y+K CI A +F
Sbjct: 401 VAAVLSACA----TLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIF 456
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+P KN +SW+++I N+ +AL QM + PN++T+ +
Sbjct: 457 HNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTL---QPNAITLTAALAACARIGA 513
Query: 181 XXXXXXVHGFILRRG--LDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
+H +LR G LD +P NAL+ MY RCG ++ F+ K DV SWN L+
Sbjct: 514 LMCGKEIHAHVLRTGVGLDDFLP--NALLDMYVRCGRMNTAWSQFNSQKK-DVTSWNILL 570
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 298
+ Y G G +++F+ M+ V P I+FI++LC CS + +V +G + F M Y +
Sbjct: 571 TGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGV 629
Query: 299 HPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASA 358
P ++HYAC+VDLLGRA L EA K I+ MP P P VWG+LL +CRIH +L E ++
Sbjct: 630 TPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQ 689
Query: 359 MLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFV 418
+FEL+ + G Y+LL ++YA+ W +V VR++M + L GCSW+EVK K+++F+
Sbjct: 690 HIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFL 749
Query: 419 SSEEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFG 478
S ++ +PQ +++ +L +M E G + D E ++ I GHSE+ A+AFG
Sbjct: 750 SDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIAFG 809
Query: 479 LINTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGE 535
LINTV G I +TKNL +CE+CH KFISK REI VRD FH F+DG CSCG+
Sbjct: 810 LINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 173/352 (49%), Gaps = 17/352 (4%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNW-SGIPSDRF 59
M+ G+L A VF + ER ++ WN A G +E + LY +M W G+ D +
Sbjct: 138 MFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVY 197
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
T+ VL+ C + L +GKE+H +++R+GYE +I V+ L+ +Y K G + A +
Sbjct: 198 TFPCVLRTC----GGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLL 253
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F MP ++ +SW+AMI Y +N M + LELF M + D P+ +T+ SV
Sbjct: 254 FDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVD--PDLMTLTSVISACELLG 311
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+H +++ G + V N+L MY G E++F +++ D+VSW ++IS
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEG----KILFESMLSK 295
Y N KAI + M V P I+ VL AC+ G ++ G K+ ++ L
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431
Query: 296 YRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 347
Y I ++++ + +D+A+ + ++P W S++ R++
Sbjct: 432 YVIVANN-----LINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLN 477
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 117/251 (46%), Gaps = 5/251 (1%)
Query: 30 FRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANIL 89
L G+ EE ++L M + D + +++ C ++G ++++ L
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQ----EEGSKVYSIAL 121
Query: 90 RHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALE 149
+ + L ++ +FG + A VF M +N SW+ ++G YAK +A+
Sbjct: 122 SSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMC 181
Query: 150 LFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITM 209
L+H+M L P+ T V VH ++R G + + V+NALITM
Sbjct: 182 LYHRM-LWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITM 240
Query: 210 YGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISF 269
Y +CG++ +FD++ D++SWN++IS Y NG + +++F M V P ++
Sbjct: 241 YVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTL 300
Query: 270 ITVLCACSHAG 280
+V+ AC G
Sbjct: 301 TSVISACELLG 311
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 354 bits (908), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 183/537 (34%), Positives = 297/537 (55%), Gaps = 5/537 (0%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY ++G + +R+V + R + WNA A ++ L ++ M G+ S+ T
Sbjct: 406 MYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYIT 465
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
VL AC++ L++GK +HA I+ G+E + HV +L+ +YAK G +S + +F
Sbjct: 466 VVSVLSACLLPG---DLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLF 522
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+ +N ++W+AM+ A + + L+L +M + + +
Sbjct: 523 NGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM--RSFGVSLDQFSFSEGLSAAAKLAV 580
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+HG ++ G + + NA MY +CGEI ++ N + SWN LIS
Sbjct: 581 LEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA 640
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
G +GY ++ F M+ G+ P +++F+++L ACSH GLV++G ++ + + + P
Sbjct: 641 LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEP 700
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
+EH C++DLLGR+ RL EA I MP +P VW SLL SC+IH N + +A+ L
Sbjct: 701 AIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENL 760
Query: 361 FELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 420
+LEP + YVL ++++A W DV++VRK MG + ++K CSW+++K K+ SF
Sbjct: 761 SKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIG 820
Query: 421 EEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLI 480
+ +PQ ++ A L + +KE GY T+ D DE +KE L HSE+LA+A+ L+
Sbjct: 821 DRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALM 880
Query: 481 NTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
+T +G T+RI KNLR+C DCH+ KF+S+ R I++RD RFH F G+CSC +YW
Sbjct: 881 STPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 174/343 (50%), Gaps = 10/343 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y G + C+RKVF+E +R + W + + G EE++++Y+ M G+ + +
Sbjct: 103 LYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENS 162
Query: 61 YTYVLKAC-VVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
+ V+ +C ++ + S+ G++I +++ G E + V +L+ + G + YAN +
Sbjct: 163 MSLVISSCGLLKDESL-----GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYI 217
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F M ++++SW+++ YA+N ++ +F ++ D + NS T+ ++
Sbjct: 218 FDQMSERDTISWNSIAAAYAQNGHIEESFRIF-SLMRRFHDEV-NSTTVSTLLSVLGHVD 275
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+HG +++ G DS++ V N L+ MY G VF ++ D++SWNSL++
Sbjct: 276 HQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMA 335
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
+ N+G A+ + +MI G S +Y++F + L AC E+G+IL ++ +
Sbjct: 336 SFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFY 395
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLG 342
+ A +V + G+ + E+ +++ MP W +L+G
Sbjct: 396 NQIIGNA-LVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIG 436
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 162/330 (49%), Gaps = 16/330 (4%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY G A VF + + + WN+ + GR + L L M SG + T
Sbjct: 305 MYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVT 364
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+T L AC +F +KG+ +H ++ G N + L+ +Y K G +S + V
Sbjct: 365 FTSALAACFTPDF----FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 420
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXX-XXXXX 179
MP ++ V+W+A+IG YA+++ P KAL F M +E S N +T+VSV
Sbjct: 421 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSS--NYITVVSVLSACLLPGD 478
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+H +I+ G +S V N+LITMY +CG++S + +F+ + N ++++WN++++
Sbjct: 479 LLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLA 538
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
++G+G++ +++ M GVS SF L A + ++EEG+ L +
Sbjct: 539 ANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQ-----QLHGLAVK 593
Query: 300 PGMEH----YACMVDLLGRANRLDEAIKLI 325
G EH + D+ + + E +K++
Sbjct: 594 LGFEHDSFIFNAAADMYSKCGEIGEVVKML 623
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 147/296 (49%), Gaps = 9/296 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
M +G++D A +FD+ ER WN+ A A G EE ++ M D
Sbjct: 204 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF---HDEVN 260
Query: 61 YTYVLKACVVSEFSVYPLQK-GKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
T V + ++S QK G+ IH +++ G++ + V TLL +YA G AN V
Sbjct: 261 STTV--STLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 318
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F+ MP K+ +SW++++ + + + AL L M+ + N VT S
Sbjct: 319 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI--SSGKSVNYVTFTSALAACFTPD 376
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+HG ++ GL + NAL++MYG+ GE+S RV ++ DVV+WN+LI
Sbjct: 377 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIG 436
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAG-LVEEGKILFESMLS 294
Y + KA+ F+ M +GVS +YI+ ++VL AC G L+E GK L ++S
Sbjct: 437 GYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVS 492
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 163/349 (46%), Gaps = 19/349 (5%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G + AR +FD R WN + VG E +E +R+M GI F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
++ AC S ++G ++H + + G +++V T +L +Y +G +S + VF
Sbjct: 61 IASLVTACGRSG---SMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 117
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
MP +N VSW++++ Y+ P + ++++ M E NS+++ V
Sbjct: 118 EEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSL--VISSCGLLKD 175
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+ G +++ GL+S + V N+LI+M G G + +FD++ D +SWNS+ +
Sbjct: 176 ESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAA 235
Query: 241 YGNNGYGKKAIQIFENM--IHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 298
Y NG+ +++ +IF M H V+ + +S T+L H + G+ + +
Sbjct: 236 YAQNGHIEESFRIFSLMRRFHDEVNSTTVS--TLLSVLGHVDHQKWGR-----GIHGLVV 288
Query: 299 HPGMEHYACMVDLLGR----ANRLDEAIKLIEDMPFEPGPTVWGSLLGS 343
G + C+ + L R A R EA + + MP + W SL+ S
Sbjct: 289 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKD-LISWNSLMAS 336
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 352 bits (904), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 197/540 (36%), Positives = 292/540 (54%), Gaps = 18/540 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G L A++VFD+ + GR + L+L+ + G+ D F
Sbjct: 228 MYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFV 287
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
++ VLKAC S+ L GK+IHA + + G E + V T L+D Y K A F
Sbjct: 288 FSVVLKACA----SLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAF 343
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+ + N VSWSA+I Y + +A++ F + + SI NS T S+
Sbjct: 344 QEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNA-SILNSFTYTSIFQACSVLAD 402
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
VH ++R L +ALITMY +CG + VF+ + NPD+V+W + IS
Sbjct: 403 CNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISG 462
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
+ G +A+++FE M+ G+ P+ ++FI VL ACSHAGLVE+GK ++ML KY + P
Sbjct: 463 HAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAP 522
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
++HY CM+D+ R+ LDEA+K +++MPFEP W L C H N EL E A L
Sbjct: 523 TIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEEL 582
Query: 361 FELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 420
+L+P + YVL ++Y A W + + KLM +R+L+K CSWI+ K KI+ F+
Sbjct: 583 RQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVG 642
Query: 421 EEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLI 480
++ +PQ +++ L + M +G Q N+ E+ LL HSE+LA+AFGLI
Sbjct: 643 DKHHPQTQEIYEKLKEFDGFM--EGDMFQCNMT-------ERREQLLDHSERLAIAFGLI 693
Query: 481 NTVKGET---IRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
+V G I++ KNLR C DCH F K +S EI++RD RFH F++G CSC +YW
Sbjct: 694 -SVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 143/308 (46%), Gaps = 11/308 (3%)
Query: 41 ELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEE-NIHV 99
E E ++M+ +G+ ++Y + +AC + L G+ +H + +R G E ++ +
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACR----ELRSLSHGRLLH-DRMRMGIENPSVLL 120
Query: 100 MTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEAC 159
+L +Y + + A+ +F M N+VS + MI YA+ + KA+ LF M+ A
Sbjct: 121 QNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGML--AS 178
Query: 160 DSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIG 219
P S ++ +H ++R GL S + ++ MY +CG +
Sbjct: 179 GDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGA 238
Query: 220 ERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHA 279
+RVFD++ V+ L+ Y G + A+++F +++ +GV F VL AC+
Sbjct: 239 KRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASL 298
Query: 280 GLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGS 339
+ GK + + ++K + + +VD + + + A + +++ EP W +
Sbjct: 299 EELNLGKQI-HACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR-EPNDVSWSA 356
Query: 340 LL-GSCRI 346
++ G C++
Sbjct: 357 IISGYCQM 364
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 351 bits (901), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 189/547 (34%), Positives = 307/547 (56%), Gaps = 18/547 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPS--DR 58
MY + G ++ A KVF +R++ WNA G G + L+ + M + I D
Sbjct: 151 MYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDE 210
Query: 59 FTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYE--ENIHVMTTLLDVYAKFGCISYA 116
FT T +LKAC S + GK+IH ++R G+ + + +L+D+Y K G + A
Sbjct: 211 FTLTSLLKACS----STGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSA 266
Query: 117 NSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXX 176
F + K +SWS++I YA+ V+A+ LF + L+ +S +S + S+
Sbjct: 267 RKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKR--LQELNSQIDSFALSSIIGVFA 324
Query: 177 XXXXXXXXXXVHGFILR--RGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSW 234
+ ++ GL++ V+N+++ MY +CG + E+ F +++ DV+SW
Sbjct: 325 DFALLRQGKQMQALAVKLPSGLET--SVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISW 382
Query: 235 NSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLS 294
+I+ YG +G GKK+++IF M+ + P + ++ VL ACSH+G+++EG+ LF +L
Sbjct: 383 TVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLE 442
Query: 295 KYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAE 354
+ I P +EHYAC+VDLLGRA RL EA LI+ MP +P +W +LL CR+H + EL +
Sbjct: 443 THGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGK 502
Query: 355 RASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKI 414
+L ++ N NYV+++++Y +A W++ + R+L + L+K G SW+E+++++
Sbjct: 503 EVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREV 562
Query: 415 YSFVSSEEDNPQIEKLRALLIKLSTEMKEQ-GYAPQTNIVHYDLDEGEKERILLGHSEKL 473
+ F S E+ +P ++ L + ++E+ GY +D+D+ KE L HSEKL
Sbjct: 563 HFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKL 622
Query: 474 AVAFGLIN---TVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGV 530
A+ L KG+TIR+ KNLR+C DCH F K +SK +VRD RFH F DG
Sbjct: 623 AIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGC 682
Query: 531 CSCGEYW 537
CSCG+YW
Sbjct: 683 CSCGDYW 689
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 155/325 (47%), Gaps = 11/325 (3%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 70
A KVFD ER + W+A + G + L L+ +M GI + FT++ LKAC +
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119
Query: 71 SEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVS 130
+ L+KG +IH L+ G+E + V +L+D+Y+K G I+ A VFR + ++ +S
Sbjct: 120 ----LNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLIS 175
Query: 131 WSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGF 190
W+AMI + KAL+ F M P+ T+ S+ +HGF
Sbjct: 176 WNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGF 235
Query: 191 ILRRGLD--SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGK 248
++R G S + +L+ +Y +CG + + FD++K ++SW+SLI Y G
Sbjct: 236 LVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFV 295
Query: 249 KAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA-- 306
+A+ +F+ + + +++ + L+ +GK + ++ G+E
Sbjct: 296 EAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGK---QMQALAVKLPSGLETSVLN 352
Query: 307 CMVDLLGRANRLDEAIKLIEDMPFE 331
+VD+ + +DEA K +M +
Sbjct: 353 SVVDMYLKCGLVDEAEKCFAEMQLK 377
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 136/291 (46%), Gaps = 10/291 (3%)
Query: 54 IPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCI 113
IP+ R +L+ C S +G ++H +L+ G N+ L+D+Y K
Sbjct: 2 IPNQRQNLVSILRVCTRKGLS----DQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREP 57
Query: 114 SYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXX 173
A VF +MP +N VSWSA++ + N +L LF +M + PN T +
Sbjct: 58 LMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGI--YPNEFTFSTNLK 115
Query: 174 XXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVS 233
+HGF L+ G + ++ V N+L+ MY +CG I+ E+VF ++ + ++S
Sbjct: 116 ACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLIS 175
Query: 234 WNSLISMYGNNGYGKKAIQIFENMIHQGVS--PSYISFITVLCACSHAGLVEEGKILFES 291
WN++I+ + + GYG KA+ F M + P + ++L ACS G++ GK +
Sbjct: 176 WNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGF 235
Query: 292 ML-SKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 341
++ S + +VDL + L A K + + E W SL+
Sbjct: 236 LVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK-EKTMISWSSLI 285
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 350 bits (899), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 195/562 (34%), Positives = 303/562 (53%), Gaps = 41/562 (7%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 70
AR+V + + R ++W A R A+ G+ +E + +Y M I FT++ +LKAC
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKAC-- 159
Query: 71 SEFSVYPLQKGKEIHANILR-HGY------------------------------EENIHV 99
++ L G++ HA R G+ E ++
Sbjct: 160 --GTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVIS 217
Query: 100 MTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEAC 159
T L+ YA+ G + A +F ++P K+ V+W+AM+ +A+N P +ALE F +M E
Sbjct: 218 WTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRM--EKS 275
Query: 160 DSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVI--NALITMYGRCGEIS 217
+ VT+ + G V+ +ALI MY +CG +
Sbjct: 276 GIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVE 335
Query: 218 IGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG-VSPSYISFITVLCAC 276
VF + N +V +++S+I +G ++A+ +F M+ Q + P+ ++F+ L AC
Sbjct: 336 EAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMAC 395
Query: 277 SHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTV 336
SH+GLV++G+ +F+SM + + P +HY CMVDLLGR RL EA++LI+ M EP V
Sbjct: 396 SHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGV 455
Query: 337 WGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGK 396
WG+LLG+CRIH N E+AE A+ LFELEP GNY+LL+++YA A W V VRKL+ +
Sbjct: 456 WGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKE 515
Query: 397 RVLQKVPGCSWIEVKK-KIYSFVSSEEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHY 455
+ L+K P SW+ K +++ F ++P K++ L +L + GY P + V Y
Sbjct: 516 KGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPY 575
Query: 456 DLDEGEKERILLGHSEKLAVAFGLINTVKGETIRITKNLRLCEDCHAFTKFISKFANREI 515
D+ + K IL+ H+EKLA+AF L+ T + TI I KNLR+C DCH F + S+ + I
Sbjct: 576 DVSDNAKRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVI 635
Query: 516 LVRDVNRFHCFRDGVCSCGEYW 537
++RD RFH FR G CSCG++W
Sbjct: 636 IMRDNMRFHHFRSGDCSCGDFW 657
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 90/173 (52%), Gaps = 13/173 (7%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y +G+++CA ++F+ + + W A A + +E LE + +M SGI +D T
Sbjct: 225 YARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTV 284
Query: 62 TYVLKACV---VSEFSVYPLQKGKEIHANILRHGYEENIHVM--TTLLDVYAKFGCISYA 116
+ AC S+++ +Q + + GY + HV+ + L+D+Y+K G + A
Sbjct: 285 AGYISACAQLGASKYADRAVQIAQ-------KSGYSPSDHVVIGSALIDMYSKCGNVEEA 337
Query: 117 NSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMV 169
+VF +M KN ++S+MI A + +AL LFH MV + + PN+VT V
Sbjct: 338 VNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQT-EIKPNTVTFV 389
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 7/215 (3%)
Query: 47 RQMNWSGIPSDRFTYTYVLKACVVSEFS-VYPLQKGKEIHANILRHGYEENIHVMTTLLD 105
R N SG S+ +L + ++S+ L + K+IH ++LR G +++ +++T L+
Sbjct: 30 RTSNNSGTFSEISNQKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIR 89
Query: 106 VYAKFGCI--SYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIP 163
K G YA V + +N W+A+I YA +A+ ++ M E + P
Sbjct: 90 TLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKE--EITP 147
Query: 164 NSVTMVSVXXXXXXXXXXXXXXXVHGFILR-RGLDSIMPVINALITMYGRCGEISIGERV 222
S T ++ H R RG + V N +I MY +C I +V
Sbjct: 148 VSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGF-CFVYVGNTMIDMYVKCESIDCARKV 206
Query: 223 FDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM 257
FD++ DV+SW LI+ Y G + A ++FE++
Sbjct: 207 FDEMPERDVISWTELIAAYARVGNMECAAELFESL 241
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 347 bits (891), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 203/544 (37%), Positives = 307/544 (56%), Gaps = 14/544 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRG-EELLELYRQMNWSGIPSDRF 59
+Y E G L+ RK+F E WN+ ALA R E + + +G +R
Sbjct: 459 LYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRI 518
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
T++ VL A F + GK+IH L++ + L+ Y K G + +
Sbjct: 519 TFSSVLSAVSSLSFG----ELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKI 574
Query: 120 FRAMPAK-NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
F M + ++V+W++MI Y N++ KAL+L M L+ + +S +V
Sbjct: 575 FSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFM-LQTGQRL-DSFMYATVLSAFASV 632
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
VH +R L+S + V +AL+ MY +CG + R F+ + + SWNS+I
Sbjct: 633 ATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMI 692
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSP-SYISFITVLCACSHAGLVEEGKILFESMLSKYR 297
S Y +G G++A+++FE M G +P +++F+ VL ACSHAGL+EEG FESM Y
Sbjct: 693 SGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYG 752
Query: 298 IHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSC-RIHC-NAELAER 355
+ P +EH++CM D+LGRA LD+ IE MP +P +W ++LG+C R + AEL ++
Sbjct: 753 LAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKK 812
Query: 356 ASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIY 415
A+ MLF+LEP NA NYVLL ++YA W D+ RK M ++K G SW+ +K ++
Sbjct: 813 AAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVH 872
Query: 416 SFVSSEEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAV 475
FV+ ++ +P + + L +L+ +M++ GY PQT YDL++ KE IL HSEKLAV
Sbjct: 873 MFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAV 932
Query: 476 AFGLINTVKGET--IRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSC 533
AF ++ + T IRI KNLR+C DCH+ K+ISK R+I++RD NRFH F+DG CSC
Sbjct: 933 AF-VLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSC 991
Query: 534 GEYW 537
++W
Sbjct: 992 SDFW 995
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 160/354 (45%), Gaps = 8/354 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + GS+ AR+VF ++ WN+ L G E +E Y+ M I FT
Sbjct: 358 MYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFT 417
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
L +C S+ + G++IH L+ G + N+ V L+ +YA+ G ++ +F
Sbjct: 418 LISSLSSCA----SLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIF 473
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+MP + VSW+++IG A+++ + + A + N +T SV
Sbjct: 474 SSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKL-NRITFSSVLSAVSSLSF 532
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKV-KNPDVVSWNSLIS 239
+HG L+ + NALI YG+CGE+ E++F ++ + D V+WNS+IS
Sbjct: 533 GELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMIS 592
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
Y +N KA+ + M+ G + TVL A + +E G + + + +
Sbjct: 593 GYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERG-MEVHACSVRACLE 651
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 353
+ + +VD+ + RLD A++ MP + W S++ H E A
Sbjct: 652 SDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYS-WNSMISGYARHGQGEEA 704
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 11/344 (3%)
Query: 5 LGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY-TY 63
+GS+ A F + + WN+ + G ++ M + G +T+ +
Sbjct: 153 IGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSL 212
Query: 64 VLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAM 123
V AC ++E V L+ +I I + G ++ V + L+ +AK G +SYA VF M
Sbjct: 213 VTTACSLTEPDVRLLE---QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQM 269
Query: 124 PAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNS-VTMVSV--XXXXXXXXX 180
+N+V+ + ++ + +A +LF M D P S V ++S
Sbjct: 270 ETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN-SMIDVSPESYVILLSSFPEYSLAEEVG 328
Query: 181 XXXXXXVHGFILRRGL-DSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
VHG ++ GL D ++ + N L+ MY +CG I+ RVF + + D VSWNS+I+
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT 388
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
NG +A++ +++M + P + I+ L +C+ + G+ + L K I
Sbjct: 389 GLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESL-KLGID 447
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGS 343
+ ++ L L+E K+ MP E W S++G+
Sbjct: 448 LNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 129/287 (44%), Gaps = 10/287 (3%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y E G ARKVFDE R W + G +E L R M GI S+++ +
Sbjct: 46 YLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAF 105
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAK-FGCISYANSVF 120
VL+AC E + G++IH + + Y + V L+ +Y K G + YA F
Sbjct: 106 VSVLRAC--QEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAF 163
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+ KNSVSW+++I Y++ A +F M + S P T S+
Sbjct: 164 GDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDG--SRPTEYTFGSLVTTACSLTE 221
Query: 181 --XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
+ I + GL + + V + L++ + + G +S +VF++++ + V+ N L+
Sbjct: 222 PDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLM 281
Query: 239 SMYGNNGYGKKAIQIFENMIHQ-GVSPSYISFITVLCACSHAGLVEE 284
+G++A ++F +M VSP S++ +L + L EE
Sbjct: 282 VGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEE 326
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 136/312 (43%), Gaps = 15/312 (4%)
Query: 84 IHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDM 143
H+ + ++ ++++++ L++ Y + G A VF MP +N VSW+ ++ Y++N
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 144 PVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVI 203
+AL MV E S + V +HG + + V
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 204 NALITMYGRC-GEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGV 262
N LI+MY +C G + F ++ + VSWNS+IS+Y G + A +IF +M + G
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 263 SPSYISFIT-VLCACSHAGLVEEGKILFESML---SKYRIHPGMEHYACMVDLLGRANRL 318
P+ +F + V ACS L E L E ++ K + + + +V ++ L
Sbjct: 203 RPTEYTFGSLVTTACS---LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259
Query: 319 DEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPW---NAGNYVLLA 375
A K+ M T+ G ++G R + E A+ + ++ + +YV+L
Sbjct: 260 SYARKVFNQMETRNAVTLNGLMVGLVR----QKWGEEATKLFMDMNSMIDVSPESYVILL 315
Query: 376 DIYAEAKMWSDV 387
+ E + +V
Sbjct: 316 SSFPEYSLAEEV 327
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 343 bits (879), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 189/539 (35%), Positives = 303/539 (56%), Gaps = 12/539 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G A+ V D E+ + + A + G E ++ ++ M + + +T
Sbjct: 210 MYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYT 269
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
Y VL +C ++ + GK IH +++ G+E + T+LL +Y + + + VF
Sbjct: 270 YASVLISC----GNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVF 325
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI-PNSVTMVSVXXXXXXXX 179
+ + N VSW+++I +N AL F +M+ DSI PNS T+ S
Sbjct: 326 KCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMR---DSIKPNSFTLSSALRGCSNLA 382
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+HG + + G D + LI +YG+CG + VFD + DV+S N++I
Sbjct: 383 MFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIY 442
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
Y NG+G++A+ +FE MI+ G+ P+ ++ ++VL AC+++ LVEEG LF+S K +I
Sbjct: 443 SYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDS-FRKDKIM 501
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAM 359
+HYACMVDLLGRA RL+EA L ++ P +W +LL +C++H E+AER +
Sbjct: 502 LTNDHYACMVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTLLSACKVHRKVEMAERITRK 560
Query: 360 LFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVS 419
+ E+EP + G +L++++YA W+ V ++ M L+K P SW+E+ K+ ++F++
Sbjct: 561 ILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMA 620
Query: 420 SEE-DNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFG 478
+ +P E++ L +L + K+ GY + V D++E KER L HSEKLA+AF
Sbjct: 621 GDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFA 680
Query: 479 LINTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
+ V G +IRI KNLR+C DCH++ K +S+ REI+ RD RFH FRDG CSCG+YW
Sbjct: 681 VWRNVGG-SIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 153/318 (48%), Gaps = 10/318 (3%)
Query: 6 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 65
G +D AR+VFD ER I WN+ L R +E +E+YR M + + D +T + V
Sbjct: 113 GDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVF 172
Query: 66 KACVVSEFSVYPLQK-GKEIHANILRHGYE-ENIHVMTTLLDVYAKFGCISYANSVFRAM 123
KA FS L+K + H + G E N+ V + L+D+Y KFG A V +
Sbjct: 173 KA-----FSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRV 227
Query: 124 PAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXX 183
K+ V +A+I Y++ +A++ F M++E PN T SV
Sbjct: 228 EEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQ--PNEYTYASVLISCGNLKDIGN 285
Query: 184 XXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGN 243
+HG +++ G +S + +L+TMY RC + RVF ++ P+ VSW SLIS
Sbjct: 286 GKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQ 345
Query: 244 NGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGME 303
NG + A+ F M+ + P+ + + L CS+ + EEG+ + +++KY
Sbjct: 346 NGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQI-HGIVTKYGFDRDKY 404
Query: 304 HYACMVDLLGRANRLDEA 321
+ ++DL G+ D A
Sbjct: 405 AGSGLIDLYGKCGCSDMA 422
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 148/305 (48%), Gaps = 14/305 (4%)
Query: 54 IPSDRFTYTY----VLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAK 109
I D T T+ +L+ C+ E S+ + K I A++L+ G+ I + L+D K
Sbjct: 57 ITCDTLTTTHNFSQLLRQCI-DERSISGI---KTIQAHMLKSGFPAEIS-GSKLVDASLK 111
Query: 110 FGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMV 169
G I YA VF M ++ V+W+++I K+ +A+E++ M+ + +P+ T+
Sbjct: 112 CGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN--NVLPDEYTLS 169
Query: 170 SVXXXXXXXXXXXXXXXVHGFILRRGLD-SIMPVINALITMYGRCGEISIGERVFDKVKN 228
SV HG + GL+ S + V +AL+ MY + G+ + V D+V+
Sbjct: 170 SVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEE 229
Query: 229 PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKIL 288
DVV +LI Y G +A++ F++M+ + V P+ ++ +VL +C + + GK L
Sbjct: 230 KDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGK-L 288
Query: 289 FESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHC 348
++ K + ++ + R + +D+++++ + + + P W SL+ +
Sbjct: 289 IHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEY-PNQVSWTSLISGLVQNG 347
Query: 349 NAELA 353
E+A
Sbjct: 348 REEMA 352
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 340 bits (871), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/541 (33%), Positives = 295/541 (54%), Gaps = 9/541 (1%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY ++G + +R+V + R + WNA A ++ L ++ M G+ S+ T
Sbjct: 389 MYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYIT 448
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
VL AC++ L++GK +HA I+ G+E + HV +L+ +YAK G +S + +F
Sbjct: 449 VVSVLSACLLPG---DLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLF 505
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+ +N ++W+AM+ A + + L+L +M + + +
Sbjct: 506 NGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM--RSFGVSLDQFSFSEGLSAAAKLAV 563
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+HG ++ G + + NA MY +CGEI ++ N + SWN LIS
Sbjct: 564 LEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA 623
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
G +GY ++ F M+ G+ P +++F+++L ACSH GLV++G ++ + + + P
Sbjct: 624 LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEP 683
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
+EH C++DLLGR+ RL EA I MP +P VW SLL SC+IH N + +A+ L
Sbjct: 684 AIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENL 743
Query: 361 FELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 420
+LEP + YVL ++++A W DV++VRK MG + ++K CSW+++K K+ SF
Sbjct: 744 SKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIG 803
Query: 421 EEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLI 480
+ +PQ ++ A L + +KE GY T+ D DE +KE L HSE+LA+A+ L+
Sbjct: 804 DRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALM 863
Query: 481 NTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCG----EY 536
+T +G T+RI KNLR+C DCH+ KF+S+ R I++RD RFH F G+ G ++
Sbjct: 864 STPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLFGKGSGFQQF 923
Query: 537 W 537
W
Sbjct: 924 W 924
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 174/343 (50%), Gaps = 10/343 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y G + C+RKVF+E +R + W + + G EE++++Y+ M G+ + +
Sbjct: 86 LYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENS 145
Query: 61 YTYVLKAC-VVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
+ V+ +C ++ + S+ G++I +++ G E + V +L+ + G + YAN +
Sbjct: 146 MSLVISSCGLLKDESL-----GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYI 200
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F M ++++SW+++ YA+N ++ +F ++ D + NS T+ ++
Sbjct: 201 FDQMSERDTISWNSIAAAYAQNGHIEESFRIF-SLMRRFHDEV-NSTTVSTLLSVLGHVD 258
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+HG +++ G DS++ V N L+ MY G VF ++ D++SWNSL++
Sbjct: 259 HQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMA 318
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
+ N+G A+ + +MI G S +Y++F + L AC E+G+IL ++ +
Sbjct: 319 SFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFY 378
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLG 342
+ A +V + G+ + E+ +++ MP W +L+G
Sbjct: 379 NQIIGNA-LVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIG 419
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 162/330 (49%), Gaps = 16/330 (4%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY G A VF + + + WN+ + GR + L L M SG + T
Sbjct: 288 MYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVT 347
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+T L AC +F +KG+ +H ++ G N + L+ +Y K G +S + V
Sbjct: 348 FTSALAACFTPDF----FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 403
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXX-XXXXX 179
MP ++ V+W+A+IG YA+++ P KAL F M +E S N +T+VSV
Sbjct: 404 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSS--NYITVVSVLSACLLPGD 461
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+H +I+ G +S V N+LITMY +CG++S + +F+ + N ++++WN++++
Sbjct: 462 LLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLA 521
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
++G+G++ +++ M GVS SF L A + ++EEG+ L +
Sbjct: 522 ANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQ-----QLHGLAVK 576
Query: 300 PGMEH----YACMVDLLGRANRLDEAIKLI 325
G EH + D+ + + E +K++
Sbjct: 577 LGFEHDSFIFNAAADMYSKCGEIGEVVKML 606
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 147/296 (49%), Gaps = 9/296 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
M +G++D A +FD+ ER WN+ A A G EE ++ M D
Sbjct: 187 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF---HDEVN 243
Query: 61 YTYVLKACVVSEFSVYPLQK-GKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
T V + ++S QK G+ IH +++ G++ + V TLL +YA G AN V
Sbjct: 244 STTV--STLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 301
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F+ MP K+ +SW++++ + + + AL L M+ + N VT S
Sbjct: 302 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI--SSGKSVNYVTFTSALAACFTPD 359
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+HG ++ GL + NAL++MYG+ GE+S RV ++ DVV+WN+LI
Sbjct: 360 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIG 419
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAG-LVEEGKILFESMLS 294
Y + KA+ F+ M +GVS +YI+ ++VL AC G L+E GK L ++S
Sbjct: 420 GYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVS 475
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 152/324 (46%), Gaps = 19/324 (5%)
Query: 26 WNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIH 85
WN + VG E +E +R+M GI F ++ AC S ++G ++H
Sbjct: 9 WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSG---SMFREGVQVH 65
Query: 86 ANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPV 145
+ + G +++V T +L +Y +G +S + VF MP +N VSW++++ Y+ P
Sbjct: 66 GFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPE 125
Query: 146 KALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINA 205
+ ++++ M E NS+++ V + G +++ GL+S + V N+
Sbjct: 126 EVIDIYKGMRGEGVGCNENSMSL--VISSCGLLKDESLGRQIIGQVVKSGLESKLAVENS 183
Query: 206 LITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM--IHQGVS 263
LI+M G G + +FD++ D +SWNS+ + Y NG+ +++ +IF M H V+
Sbjct: 184 LISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVN 243
Query: 264 PSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGR----ANRLD 319
+ +S T+L H + G+ + + G + C+ + L R A R
Sbjct: 244 STTVS--TLLSVLGHVDHQKWGR-----GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 296
Query: 320 EAIKLIEDMPFEPGPTVWGSLLGS 343
EA + + MP + W SL+ S
Sbjct: 297 EANLVFKQMPTKD-LISWNSLMAS 319
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 109/229 (47%), Gaps = 25/229 (10%)
Query: 123 MPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACD--SIPNSVTMVS-VXXXXXXXX 179
MP +N VSW+ M+ + + ++ +E F +M CD P+S + S V
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKM----CDLGIKPSSFVIASLVTACGRSGS 56
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
VHGF+ + GL S + V A++ +YG G +S +VF+++ + +VVSW SL+
Sbjct: 57 MFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMV 116
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEE--------GKILFES 291
Y + G ++ I I++ M +GV + S V+ +C GL+++ G+++
Sbjct: 117 GYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQVVKSG 173
Query: 292 MLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSL 340
+ SK + ++ +LG +D A + + M E W S+
Sbjct: 174 LESKLAVEN------SLISMLGSMGNVDYANYIFDQMS-ERDTISWNSI 215
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 192/537 (35%), Positives = 287/537 (53%), Gaps = 9/537 (1%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y + G +D A K+F + + + W L R E L+L++ M I S +
Sbjct: 169 YLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPF 228
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
T V+ AC + G ++H I++ G+ +V +L+ YA I + VF
Sbjct: 229 TCVITACA----NAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFD 284
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
+ W+A++ Y+ N AL +F M+ + +PN T S
Sbjct: 285 EKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSI--LPNQSTFASGLNSCSALGTL 342
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY 241
+HG ++ GL++ V N+L+ MY G ++ VF K+ +VSWNS+I
Sbjct: 343 DWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGC 402
Query: 242 GNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKY-RIHP 300
+G GK A IF MI P I+F +L ACSH G +E+G+ LF M S I
Sbjct: 403 AQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDR 462
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
++HY CMVD+LGR +L EA +LIE M +P VW +LL +CR+H + + E+A+A +
Sbjct: 463 KIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAI 522
Query: 361 FELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 420
F L+ ++ YVLL++IYA A WS+V +R M K + K PG SW+ ++ K + F S
Sbjct: 523 FNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSG 582
Query: 421 EEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLI 480
D P ++ L L ++KE GYAP +D+++ +KE +L HSE+LA+AFGLI
Sbjct: 583 --DQPHCSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLI 640
Query: 481 NTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
NTV+G + + KNLR+CEDCH K IS REI++RD RFH F++G CSCG+YW
Sbjct: 641 NTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 146/348 (41%), Gaps = 26/348 (7%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 70
A +FDE R + WN+ G ++L+ +M + S +T ++ C
Sbjct: 85 ALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVS----WTAMVNGC-- 138
Query: 71 SEFSVYPLQKGKEIHANILRHGYE-ENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSV 129
+ GK A L + ++ +++ Y +FG + A +F+ MP KN +
Sbjct: 139 -------FRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVI 191
Query: 130 SWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHG 189
SW+ MI +N+ +AL+LF M+ C S V VHG
Sbjct: 192 SWTTMICGLDQNERSGEALDLFKNML--RCCIKSTSRPFTCVITACANAPAFHMGIQVHG 249
Query: 190 FILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKK 249
I++ G V +LIT Y C I +VFD+ + V W +L+S Y N +
Sbjct: 250 LIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHED 309
Query: 250 AIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA--- 306
A+ IF M+ + P+ +F + L +CS G ++ GK + + G+E A
Sbjct: 310 ALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGK-----EMHGVAVKLGLETDAFVG 364
Query: 307 -CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 353
+V + + +++A+ + + F+ W S++ C H + A
Sbjct: 365 NSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQHGRGKWA 411
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 106/260 (40%), Gaps = 43/260 (16%)
Query: 113 ISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQM----------VLEACDSI 162
I A VF +P+ + ++ MI Y +++ V AL LF +M ++ C
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVEC 110
Query: 163 PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSI------MPVI-----NALITMYG 211
+ T V + V+G +D MPV N+++ Y
Sbjct: 111 GDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYL 170
Query: 212 RCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFIT 271
+ G++ ++F ++ +V+SW ++I N +A+ +F+NM+ + + F
Sbjct: 171 QFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTC 230
Query: 272 VLCACSHA----------GLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEA 321
V+ AC++A GL+ + L+E +S A ++ R+ ++
Sbjct: 231 VITACANAPAFHMGIQVHGLIIKLGFLYEEYVS-----------ASLITFYANCKRIGDS 279
Query: 322 IKLIEDMPFEPGPTVWGSLL 341
K+ ++ E VW +LL
Sbjct: 280 RKVFDEKVHEQ-VAVWTALL 298
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 338 bits (868), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 186/547 (34%), Positives = 295/547 (53%), Gaps = 15/547 (2%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWS-GIPSDRFT 60
Y +L ++ ARK+FDE E + W + +G+ + L ++++M+ +P + +T
Sbjct: 74 YVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYT 133
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ V KAC ++ + GK IHA + G NI V ++L+D+Y K + A VF
Sbjct: 134 FASVFKACS----ALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVF 189
Query: 121 RAMPA--KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
+M +N VSW++MI YA+N +A+ELF N + SV
Sbjct: 190 DSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSL 249
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
HG + R G +S V +L+ MY +CG +S E++F +++ V+S+ S+I
Sbjct: 250 GRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMI 309
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 298
+G G+ A+++F+ M+ ++P+Y++ + VL ACSH+GLV EG M KY +
Sbjct: 310 MAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGV 369
Query: 299 HPGMEHYACMVDLLGRANRLDEAIKLIEDMPF--EPGPTVWGSLLGSCRIHCNAELAERA 356
P HY C+VD+LGR R+DEA +L + + E G +WG+LL + R+H E+ A
Sbjct: 370 VPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEA 429
Query: 357 SAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYS 416
S L + Y+ L++ YA + W D +S+R M + K CSWIE K +Y
Sbjct: 430 SKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYV 489
Query: 417 FVSSEEDNPQIEKLRALLIKLSTEMKEQGY------APQTNIVHYDLDEGEKERILLGHS 470
F + + + ++ L L MKE+G+ ++ V D+DE K+ ++ H
Sbjct: 490 FHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMITTSSSVFVDVDEEAKDEMVSLHC 549
Query: 471 EKLAVAFGLINTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGV 530
E+LA+A+GL++ G TIRI NLR+C DCH K IS+ REI+VRDVNRFHCF++G
Sbjct: 550 ERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIVEREIVVRDVNRFHCFKNGS 609
Query: 531 CSCGEYW 537
C+C +YW
Sbjct: 610 CTCRDYW 616
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 5/208 (2%)
Query: 84 IHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDM 143
+H L+ G+ + + L+ Y K I+ A +F M N VSW+++I Y
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 144 PVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVI 203
P AL +F +M E PN T SV +H + GL + V
Sbjct: 111 PQNALSMFQKM-HEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVS 169
Query: 204 NALITMYGRCGEISIGERVFDKV--KNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG 261
++L+ MYG+C ++ RVFD + +VVSW S+I+ Y N G +AI++F +
Sbjct: 170 SSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAAL 229
Query: 262 VSPSYISFI--TVLCACSHAGLVEEGKI 287
S F+ +V+ ACS G ++ GK+
Sbjct: 230 TSDRANQFMLASVISACSSLGRLQWGKV 257
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 75/144 (52%), Gaps = 4/144 (2%)
Query: 187 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 246
+H L+ G S +N L+ Y + EI+ ++FD++ P+VVSW S+IS Y + G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 247 GKKAIQIFENMIHQG--VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 304
+ A+ +F+ M H+ V P+ +F +V ACS GK + + L + +
Sbjct: 111 PQNALSMFQKM-HEDRPVPPNEYTFASVFKACSALAESRIGKNI-HARLEISGLRRNIVV 168
Query: 305 YACMVDLLGRANRLDEAIKLIEDM 328
+ +VD+ G+ N ++ A ++ + M
Sbjct: 169 SSSLVDMYGKCNDVETARRVFDSM 192
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 337 bits (864), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 200/636 (31%), Positives = 308/636 (48%), Gaps = 99/636 (15%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY G L+ +RKVF+ ++R + WN+ + +G ++ + L +M G+ D T
Sbjct: 133 MYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVT 192
Query: 61 YTYVLKACVVSEFS--------------VYP-----------------LQKGKEIHANIL 89
+ +L S + P L+ GK IH IL
Sbjct: 193 WNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYIL 252
Query: 90 RHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMI-----GC------- 137
R+ +++V TTL+D+Y K G + YA VF M AKN V+W++++ C
Sbjct: 253 RNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEA 312
Query: 138 -----------------------YAKNDMPVKALELFHQM--------------VLEACD 160
YA P KAL++ +M + C
Sbjct: 313 LMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCS 372
Query: 161 SI-------------------PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMP 201
PN+ TM ++ VHGF LR+ L
Sbjct: 373 KNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAY 432
Query: 202 VINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG 261
V AL+ MYG+ G++ +F +KN + SWN ++ Y G G++ I F M+ G
Sbjct: 433 VATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAG 492
Query: 262 VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEA 321
+ P I+F +VL C ++GLV+EG F+ M S+Y I P +EH +CMVDLLGR+ LDEA
Sbjct: 493 MEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEA 552
Query: 322 IKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEA 381
I+ M +P T+WG+ L SC+IH + ELAE A L LEP N+ NY+++ ++Y+
Sbjct: 553 WDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNL 612
Query: 382 KMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEM 441
W DV+ +R LM ++ SWI++ + ++ F + + +P + L KL +EM
Sbjct: 613 NRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEM 672
Query: 442 KEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLINTVKGETIRITKNLRLCEDCH 501
K+ GY P T+ +H D+ + EKE++L+GH+EKLA+ +GLI IR+ KN +C D H
Sbjct: 673 KKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSH 732
Query: 502 AFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
K++S NREI++++ R H FRDG CSC + W
Sbjct: 733 TVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 151/377 (40%), Gaps = 77/377 (20%)
Query: 7 SLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLK 66
SL A K+FDE +R WN G E+ +EL+R+M +SG + T +L+
Sbjct: 38 SLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQ 97
Query: 67 ACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK 126
C E +G++IH +LR G E N+ + +L+ +Y++ G + + VF +M +
Sbjct: 98 VCSNKE----GFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR 153
Query: 127 NSVSWSAMIGCYAKNDMPVKALELFHQMVLEAC-----------------------DSI- 162
N SW++++ Y K A+ L +M E C D+I
Sbjct: 154 NLSSWNSILSSYTKLGYVDDAIGLLDEM--EICGLKPDIVTWNSLLSGYASKGLSKDAIA 211
Query: 163 -----------PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYG 211
P++ ++ S+ +HG+ILR L + V LI MY
Sbjct: 212 VLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYI 271
Query: 212 RCGEISIGERVFD--KVKN---------------------------------PDVVSWNS 236
+ G + VFD KN PD ++WNS
Sbjct: 272 KTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNS 331
Query: 237 LISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKY 296
L S Y G +KA+ + M +GV+P+ +S+ + CS G +F M +
Sbjct: 332 LASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKM-QEE 390
Query: 297 RIHPGMEHYACMVDLLG 313
+ P + ++ +LG
Sbjct: 391 GVGPNAATMSTLLKILG 407
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 175/408 (42%), Gaps = 55/408 (13%)
Query: 81 GKEIHANILRHGYE-ENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYA 139
G IH +++ G + + V++ + Y + + +AN +F MP ++ ++W+ ++
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 140 KNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSI 199
++ KA+ELF +M + + TMV + +HG++LR GL+S
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDS--TMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESN 123
Query: 200 MPVINALITMYGRCGEISIGERVFDKVKN------------------------------- 228
+ + N+LI MY R G++ + +VF+ +K+
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 229 ----PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEE 284
PD+V+WNSL+S Y + G K AI + + M G+ PS S ++L A + G ++
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKL 243
Query: 285 GKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSC 344
GK + +L + ++ + ++D+ + L A +++ DM W SL+
Sbjct: 244 GKAIHGYIL-RNQLWYDVYVETTLIDMYIKTGYLPYA-RMVFDMMDAKNIVAWNSLVSGL 301
Query: 345 RIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGK--RVLQKV 402
C L + A A++ +E I +A W+ + S +GK + L +
Sbjct: 302 SYAC---LLKDAEALMIRMEK---------EGIKPDAITWNSLASGYATLGKPEKALDVI 349
Query: 403 PGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKEQGYAPQT 450
V + S+ + + R L K+ +M+E+G P
Sbjct: 350 GKMKEKGVAPNVVSWTAIFSGCSKNGNFRNAL-KVFIKMQEEGVGPNA 396
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 336 bits (861), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 206/542 (38%), Positives = 282/542 (52%), Gaps = 53/542 (9%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY G ++ ARKVFDE + + WNA
Sbjct: 150 MYGGCGCVEFARKVFDEMHQPNLVAWNA-------------------------------- 177
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
V+ AC F + +EI +L + +L Y K G + A +F
Sbjct: 178 ---VITAC----FRGNDVAGAREIFDKMLVRNHTS----WNVMLAGYIKAGELESAKRIF 226
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
MP ++ VSWS MI A N ++ F + L+ PN V++ V
Sbjct: 227 SEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRE--LQRAGMSPNEVSLTGVLSACSQSGS 284
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPD-VVSWNSLIS 239
+HGF+ + G I+ V NALI MY RCG + + VF+ ++ +VSW S+I+
Sbjct: 285 FEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIA 344
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
+G G++A+++F M GV+P ISFI++L ACSHAGL+EEG+ F M Y I
Sbjct: 345 GLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIE 404
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAM 359
P +EHY CMVDL GR+ +L +A I MP P VW +LLG+C H N ELAE+
Sbjct: 405 PEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQR 464
Query: 360 LFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVS 419
L EL+P N+G+ VLL++ YA A W DV S+RK M + ++K S +EV K +Y F +
Sbjct: 465 LNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTA 524
Query: 420 SEE----DNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAV 475
E+ D EKL+ ++++L E GY P+ YD++E EKE + HSEKLA+
Sbjct: 525 GEKKKGIDIEAHEKLKEIILRLK---DEAGYTPEVASALYDVEEEEKEDQVSKHSEKLAL 581
Query: 476 AFGLINTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGE 535
AF L KG IRI KNLR+C DCHA K SK EILVRD NRFH F+DG CSC +
Sbjct: 582 AFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRD 641
Query: 536 YW 537
YW
Sbjct: 642 YW 643
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 153/351 (43%), Gaps = 49/351 (13%)
Query: 7 SLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSG-IPSDRFTYTYVL 65
+L AR++ E +++N R + + ++ +M G + D F++ +V+
Sbjct: 54 ALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVI 113
Query: 66 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA 125
KA V F L+ G ++H L+HG E ++ V TTL+ +Y GC+ +A VF M
Sbjct: 114 KA--VENFR--SLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQ 169
Query: 126 KNSVSWSAMI-GCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXX 184
N V+W+A+I C+ ND+ A E+F +M++ S
Sbjct: 170 PNLVAWNAVITACFRGNDV-AGAREIFDKMLVRNHTS----------------------- 205
Query: 185 XXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNN 244
N ++ Y + GE+ +R+F ++ + D VSW+++I +N
Sbjct: 206 ------------------WNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHN 247
Query: 245 GYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 304
G ++ F + G+SP+ +S VL ACS +G E GKIL + K +
Sbjct: 248 GSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKIL-HGFVEKAGYSWIVSV 306
Query: 305 YACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAER 355
++D+ R + A + E M + W S++ +H E A R
Sbjct: 307 NNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVR 357
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 335 bits (860), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 180/495 (36%), Positives = 287/495 (57%), Gaps = 7/495 (1%)
Query: 43 LELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTT 102
LE ++M + D K+C + + G+ +H ++ GY+ ++ V ++
Sbjct: 101 LEFLKKMMAGNLRPDDHVLPSATKSCAI----LSRCDIGRSVHCLSMKTGYDADVFVGSS 156
Query: 103 LLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI 162
L+D+YAK G I YA +F MP +N V+WS M+ YA+ +AL LF + + E +
Sbjct: 157 LVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFE--NLA 214
Query: 163 PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERV 222
N + SV +HG ++ DS V ++L+++Y +CG +V
Sbjct: 215 VNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQV 274
Query: 223 FDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLV 282
F++V ++ WN+++ Y + + +K I++F+ M G+ P++I+F+ VL ACSHAGLV
Sbjct: 275 FNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLV 334
Query: 283 EEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLG 342
+EG+ F+ M + RI P +HYA +VD+LGRA RL EA+++I +MP +P +VWG+LL
Sbjct: 335 DEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLT 393
Query: 343 SCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKV 402
SC +H N ELA A+ +FEL P ++G ++ L++ YA + D RKL+ R +K
Sbjct: 394 SCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKE 453
Query: 403 PGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEK 462
G SW+E + K+++F + E + + +++ L +L EM++ GY T+ V ++D EK
Sbjct: 454 TGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEK 513
Query: 463 ERILLGHSEKLAVAFGLINTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNR 522
+ + HSE+LA+AFGLI IR+ KNLR+C DCH KF+S R I+VRD NR
Sbjct: 514 NQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNR 573
Query: 523 FHCFRDGVCSCGEYW 537
FH F DG CSC +YW
Sbjct: 574 FHRFEDGKCSCNDYW 588
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 110/207 (53%), Gaps = 2/207 (0%)
Query: 80 KGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYA 139
KG ++H +++ G V L++ Y+K + F P K+S +WS++I C+A
Sbjct: 33 KGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFA 92
Query: 140 KNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSI 199
+N++P +LE +M+ A + P+ + S VH ++ G D+
Sbjct: 93 QNELPWMSLEFLKKMM--AGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDAD 150
Query: 200 MPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIH 259
+ V ++L+ MY +CGEI ++FD++ +VV+W+ ++ Y G ++A+ +F+ +
Sbjct: 151 VFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALF 210
Query: 260 QGVSPSYISFITVLCACSHAGLVEEGK 286
+ ++ + SF +V+ C+++ L+E G+
Sbjct: 211 ENLAVNDYSFSSVISVCANSTLLELGR 237
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 5/136 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y + G + A +VF+E + + IWNA +A A ++++EL+++M SG+ + T
Sbjct: 261 LYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFIT 320
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ VL AC + + +G+ + E +L+D+ + G + A V
Sbjct: 321 FLNVLNACSHAGL----VDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVI 376
Query: 121 RAMPAKNSVS-WSAMI 135
MP + S W A++
Sbjct: 377 TNMPIDPTESVWGALL 392
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 329 bits (844), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 191/553 (34%), Positives = 291/553 (52%), Gaps = 43/553 (7%)
Query: 24 YIWNAFFRALA---MVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQK 80
++WN RA+ + + +Y +M + D T+ ++L S + L
Sbjct: 25 FLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLP----SFHNPLHLPL 80
Query: 81 GKEIHANILRHGYEENIHVMTTLLDVY-------------------------------AK 109
G+ HA IL G +++ V T+LL++Y AK
Sbjct: 81 GQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAK 140
Query: 110 FGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI---PNSV 166
G I A +F MP +N +SWS +I Y +AL+LF +M L + PN
Sbjct: 141 AGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEF 200
Query: 167 TMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKV 226
TM +V VH +I + ++ + + ALI MY +CG + +RVF+ +
Sbjct: 201 TMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL 260
Query: 227 -KNPDVVSWNSLISMYGNNGYGKKAIQIFENMI-HQGVSPSYISFITVLCACSHAGLVEE 284
DV +++++I G + Q+F M ++P+ ++F+ +L AC H GL+ E
Sbjct: 261 GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINE 320
Query: 285 GKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSC 344
GK F+ M+ ++ I P ++HY CMVDL GR+ + EA I MP EP +WGSLL
Sbjct: 321 GKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGS 380
Query: 345 RIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPG 404
R+ + + E A L EL+P N+G YVLL+++YA+ W +VK +R M + + KVPG
Sbjct: 381 RMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPG 440
Query: 405 CSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKER 464
CS++EV+ ++ FV +E + E++ A+L ++ ++E GY T V DL+E +KE
Sbjct: 441 CSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEI 500
Query: 465 ILLGHSEKLAVAFGLINTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFH 524
L HSEKLA+AF L+ T G +RI KNLR+C DCH K ISK +REI+VRD NRFH
Sbjct: 501 ALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFH 560
Query: 525 CFRDGVCSCGEYW 537
FRDG CSC ++W
Sbjct: 561 HFRDGSCSCRDFW 573
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 123/247 (49%), Gaps = 15/247 (6%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM-----NWSGIPS 56
Y + G +D ARK+FDE ER + W+ M G+ +E L+L+R+M N + +
Sbjct: 138 YAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRP 197
Query: 57 DRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYA 116
+ FT + VL AC + L++GK +HA I ++ E +I + T L+D+YAK G + A
Sbjct: 198 NEFTMSTVLSAC----GRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERA 253
Query: 117 NSVFRAMPAKNSV-SWSAMIGCYAKNDMPVKALELFHQMVLEACDSI-PNSVTMVSVXXX 174
VF A+ +K V ++SAMI C A + + +LF +M D+I PNSVT V +
Sbjct: 254 KRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMT--TSDNINPNSVTFVGILGA 311
Query: 175 XXXXXXXXXXXXVHGFILRR-GLDSIMPVINALITMYGRCGEISIGERVFDKVK-NPDVV 232
++ G+ + ++ +YGR G I E + PDV+
Sbjct: 312 CVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVL 371
Query: 233 SWNSLIS 239
W SL+S
Sbjct: 372 IWGSLLS 378
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 328 bits (841), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 301/542 (55%), Gaps = 12/542 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
M+ + G + AR++FDE ER +Y + + G E EL++ M W + SD T
Sbjct: 167 MHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMM-WEEL-SDCET 224
Query: 61 YTY-VLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
+T+ V+ S+Y GK++H L+ G +N V L+D+Y+K G I A
Sbjct: 225 HTFAVMLRASAGLGSIYV---GKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCA 281
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F MP K +V+W+ +I YA + +AL L + M ++ SI + T+ +
Sbjct: 282 FECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDM-RDSGVSI-DQFTLSIMIRISTKLA 339
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
H ++R G +S + AL+ Y + G + VFDK+ +++SWN+L+
Sbjct: 340 KLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMG 399
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
Y N+G G A+++FE MI V+P++++F+ VL AC+++GL E+G +F SM + I
Sbjct: 400 GYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIK 459
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAM 359
P HYACM++LLGR LDEAI I P + +W +LL +CR+ N EL +
Sbjct: 460 PRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEK 519
Query: 360 LFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVS 419
L+ + P GNYV++ ++Y ++ V + + + L +P C+W+EV + +SF+S
Sbjct: 520 LYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLS 579
Query: 420 SEEDNPQIEKLRALLIK----LSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAV 475
+ + E ++ + + L E+ E GY+ + + D+DE E+ER+ HSEKLA+
Sbjct: 580 GDRFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAI 639
Query: 476 AFGLINTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGE 535
A+GL+NT + ++IT+N R+C++CH +FIS RE++VRD +RFH F++G CSCG
Sbjct: 640 AYGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGG 699
Query: 536 YW 537
YW
Sbjct: 700 YW 701
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 80/167 (47%), Gaps = 2/167 (1%)
Query: 187 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 246
V+GF++ G + ++N ++ M+ +CG I R+FD++ ++ S+ S+IS + N G
Sbjct: 145 VYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGN 204
Query: 247 GKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA 306
+A ++F+ M + +F +L A + G + GK L L K +
Sbjct: 205 YVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCAL-KLGVVDNTFVSC 263
Query: 307 CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 353
++D+ + +++A E MP E W +++ +H +E A
Sbjct: 264 GLIDMYSKCGDIEDARCAFECMP-EKTTVAWNNVIAGYALHGYSEEA 309
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 318 bits (816), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 176/539 (32%), Positives = 285/539 (52%), Gaps = 12/539 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMN-WSGIPSDRF 59
MY + G + A ++F+ +R I WN A GR + +++M+ +G+ D
Sbjct: 276 MYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVI 335
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
T +L A + E G+ IH +R G+ ++ + T L+D+Y + G + A +
Sbjct: 336 TSINLLPASAILE--------GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVI 387
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F M KN +SW+++I Y +N ALELF + L +P+S T+ S+
Sbjct: 388 FDRMAEKNVISWNSIIAAYVQNGKNYSALELFQE--LWDSSLVPDSTTIASILPAYAESL 445
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+H +I++ S ++N+L+ MY CG++ + F+ + DVVSWNS+I
Sbjct: 446 SLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIM 505
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
Y +G+G+ ++ +F MI V+P+ +F ++L ACS +G+V+EG FESM +Y I
Sbjct: 506 AYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGID 565
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAM 359
PG+EHY CM+DL+GR A + +E+MPF P +WGSLL + R H + +AE A+
Sbjct: 566 PGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQ 625
Query: 360 LFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVS 419
+F++E N G YVLL ++YAEA W DV ++ LM + + + S +E K K + F +
Sbjct: 626 IFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTN 685
Query: 420 SEEDNPQIEKLRALLIKLSTEMKEQG-YAPQTNIVHYDLDEGEKERILLGHSEKLAVAFG 478
+ + K+ +L +S + E+ Y + + + + HS +LA FG
Sbjct: 686 GDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFG 745
Query: 479 LINTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
LI+T G + + N R+C CH F + S+ REI+V D FH F +G CSCG YW
Sbjct: 746 LISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 153/287 (53%), Gaps = 10/287 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y +LG A KVF+E ER I WN+ +G G L L+++M G DRF+
Sbjct: 174 LYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFS 233
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEE-NIHVMTTLLDVYAKFGCISYANSV 119
L AC VY + GKEIH + +R E ++ VMT++LD+Y+K+G +SYA +
Sbjct: 234 TMSALGACS----HVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERI 289
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F M +N V+W+ MIGCYA+N A F +M E P+ +T +++
Sbjct: 290 FNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMS-EQNGLQPDVITSINL----LPAS 344
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+HG+ +RRG M + ALI MYG CG++ E +FD++ +V+SWNS+I+
Sbjct: 345 AILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIA 404
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGK 286
Y NG A+++F+ + + P + ++L A + + + EG+
Sbjct: 405 AYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGR 451
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 170/338 (50%), Gaps = 14/338 (4%)
Query: 8 LDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA 67
++ A ++FDE + ++WN + G E ++ Y +M ++G+ +D FTY +V+K+
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 68 CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKN 127
+ L++GK+IHA +++ G+ +++V +L+ +Y K GC A VF MP ++
Sbjct: 140 VA----GISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERD 195
Query: 128 SVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXV 187
VSW++MI Y +L LF +M+ C P+ + +S +
Sbjct: 196 IVSWNSMISGYLALGDGFSSLMLFKEML--KCGFKPDRFSTMSALGACSHVYSPKMGKEI 253
Query: 188 HGFILRRGLDS-IMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 246
H +R +++ + V+ +++ MY + GE+S ER+F+ + ++V+WN +I Y NG
Sbjct: 254 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGR 313
Query: 247 GKKAIQIFENMIHQ-GVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHY 305
A F+ M Q G+ P I+ I +L A + + EG+ + + + + P M
Sbjct: 314 VTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFL-PHMVLE 368
Query: 306 ACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGS 343
++D+ G +L A ++I D E W S++ +
Sbjct: 369 TALIDMYGECGQLKSA-EVIFDRMAEKNVISWNSIIAA 405
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 6/203 (2%)
Query: 88 ILRHGY----EENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDM 143
+LR Y + N +T L +A + A +F M ++ W+ MI + +
Sbjct: 51 VLRDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGL 110
Query: 144 PVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVI 203
++A++ + +MV + ++ T V +H +++ G S + V
Sbjct: 111 YIEAVQFYSRMVFAGVKA--DTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVC 168
Query: 204 NALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVS 263
N+LI++Y + G E+VF+++ D+VSWNS+IS Y G G ++ +F+ M+ G
Sbjct: 169 NSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFK 228
Query: 264 PSYISFITVLCACSHAGLVEEGK 286
P S ++ L ACSH + GK
Sbjct: 229 PDRFSTMSALGACSHVYSPKMGK 251
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 156/455 (34%), Positives = 260/455 (57%), Gaps = 2/455 (0%)
Query: 83 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKND 142
++H+ ++R G+ + L+++Y K G + YA VF A+N + ++ Y ++
Sbjct: 258 QVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDK 317
Query: 143 MPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPV 202
+AL LF +M + + PN T + +HG +L+ G + + V
Sbjct: 318 SFEEALNLFSKM--DTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMV 375
Query: 203 INALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGV 262
NAL+ MY + G I + F + D+V+WN++IS ++G G++A++ F+ MI G
Sbjct: 376 GNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGE 435
Query: 263 SPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAI 322
P+ I+FI VL ACSH G VE+G F ++ K+ + P ++HY C+V LL +A +A
Sbjct: 436 IPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAE 495
Query: 323 KLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAK 382
+ P E W +LL +C + N L ++ + E P ++G YVLL++I+A+++
Sbjct: 496 DFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSR 555
Query: 383 MWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMK 442
W V VR LM R ++K PG SWI ++ + + F++ + +P+I + A + ++ +++K
Sbjct: 556 EWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIK 615
Query: 443 EQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLINTVKGETIRITKNLRLCEDCHA 502
GY+P +D+DE ++E L HSEKLAVA+GLI T + + +TKN+R+C+DCH+
Sbjct: 616 PLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHS 675
Query: 503 FTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
K ISK + R I++RD NRFH F DG CSC +YW
Sbjct: 676 AIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 169/365 (46%), Gaps = 12/365 (3%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIP-SDRFTYTYVLKACV 69
ARK+FD ER + W A + G E+L+L++ M +SG + F T V K+C
Sbjct: 88 ARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCS 147
Query: 70 VSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSV 129
S +++GK+ H L++G + V TL+ +Y+ A V +P +
Sbjct: 148 NSG----RIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLS 203
Query: 130 SWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHG 189
+S+ + Y + + L++ + E D + N++T +S VH
Sbjct: 204 VFSSALSGYLECGAFKEGLDVLRKTANE--DFVWNNLTYLSSLRLFSNLRDLNLALQVHS 261
Query: 190 FILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKK 249
++R G ++ + ALI MYG+CG++ +RVFD ++ +++ Y + ++
Sbjct: 262 RMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEE 321
Query: 250 AIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESML-SKYRIHPGMEHYACM 308
A+ +F M + V P+ +F +L + + L+++G +L +L S YR H + + +
Sbjct: 322 ALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGN--AL 379
Query: 309 VDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH-CNAELAERASAMLFELEPWN 367
V++ ++ +++A K M F T W +++ C H E E M+F E N
Sbjct: 380 VNMYAKSGSIEDARKAFSGMTFRDIVT-WNTMISGCSHHGLGREALEAFDRMIFTGEIPN 438
Query: 368 AGNYV 372
++
Sbjct: 439 RITFI 443
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 92/171 (53%), Gaps = 6/171 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G + A++VFD+T + I++ A EE L L+ +M+ +P + +T
Sbjct: 281 MYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYT 340
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ +L + ++E S+ L++G +H +L+ GY ++ V L+++YAK G I A F
Sbjct: 341 FAILLNS--IAELSL--LKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAF 396
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 171
M ++ V+W+ MI + + + +ALE F +M+ IPN +T + V
Sbjct: 397 SGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTG--EIPNRITFIGV 445
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 127/291 (43%), Gaps = 11/291 (3%)
Query: 40 EELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANIL---RHGYEEN 96
++L L + + P DR +LK C S + L+ G+ IHA+++ + E+
Sbjct: 15 DKLASLVPKSKKTPFPIDRLNE--LLKVCANSSY----LRIGESIHAHLIVTNQSSRAED 68
Query: 97 IHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVL 156
+ + +L+++Y K A +F MP +N VSW AM+ Y + + L+LF M
Sbjct: 69 AYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFF 128
Query: 157 EACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEI 216
+S PN V HG L+ GL S V N L+ MY C
Sbjct: 129 SG-ESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGN 187
Query: 217 SIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCAC 276
RV D + D+ ++S +S Y G K+ + + ++ + +++++ L
Sbjct: 188 GEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLF 247
Query: 277 SHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIED 327
S+ + + S + ++ + +E ++++ G+ ++ A ++ +D
Sbjct: 248 SNLRDLNLA-LQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDD 297
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 71/129 (55%), Gaps = 2/129 (1%)
Query: 203 INALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGV 262
IN+LI +Y +C E ++FD + +VVSW +++ Y N+G+ + +++F++M G
Sbjct: 72 INSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGE 131
Query: 263 S-PSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEA 321
S P+ V +CS++G +EEGK F KY + +V + + EA
Sbjct: 132 SRPNEFVATVVFKSCSNSGRIEEGK-QFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEA 190
Query: 322 IKLIEDMPF 330
I++++D+P+
Sbjct: 191 IRVLDDLPY 199
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 166/435 (38%), Positives = 244/435 (56%), Gaps = 4/435 (0%)
Query: 103 LLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI 162
+++ K G A V R +N ++W+ MIG Y +N +AL+ M L D
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNM-LSFTDIK 162
Query: 163 PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERV 222
PN + S VH ++ G++ + +AL+ +Y +CG+I V
Sbjct: 163 PNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREV 222
Query: 223 FDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLV 282
F VK DV WN++I+ + +G +AI++F M + VSP I+F+ +L CSH GL+
Sbjct: 223 FYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLL 282
Query: 283 EEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLG 342
EEGK F M ++ I P +EHY MVDLLGRA R+ EA +LIE MP EP +W SLL
Sbjct: 283 EEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
Query: 343 SCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKV 402
S R + N EL E A + L +G+YVLL++IY+ K W + VR+LM K ++K
Sbjct: 343 SSRTYKNPELGEIA---IQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKA 399
Query: 403 PGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEK 462
G SW+E I+ F + + + + + + +L L + K QG+ T++V D+ E EK
Sbjct: 400 KGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEK 459
Query: 463 ERILLGHSEKLAVAFGLINTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNR 522
E L HSEKLA+A+ ++ + G IRI KN+R+C DCH + K +SK NR I++RD R
Sbjct: 460 EENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIR 519
Query: 523 FHCFRDGVCSCGEYW 537
FH F DG+CSC +YW
Sbjct: 520 FHRFEDGLCSCRDYW 534
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 119/257 (46%), Gaps = 16/257 (6%)
Query: 4 ELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM-NWSGIPSDRFTYT 62
++G A+KV ++ + WN + EE L+ + M +++ I ++F++
Sbjct: 110 KIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFA 169
Query: 63 YVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRA 122
L AC + L K +H+ ++ G E N + + L+DVYAK G I + VF +
Sbjct: 170 SSLAACA----RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYS 225
Query: 123 MPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXX 182
+ + W+AMI +A + + +A+ +F +M EA P+S+T + +
Sbjct: 226 VKRNDVSIWNAMITGFATHGLATEAIRVFSEM--EAEHVSPDSITFLGLLTTCSHCGLLE 283
Query: 183 XXXXVHGFILRRGLDSIMPVI---NALITMYGRCGEISIGERVFDKVK-NPDVVSWNSLI 238
G + RR SI P + A++ + GR G + + + + PDVV W SL+
Sbjct: 284 EGKEYFGLMSRRF--SIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Query: 239 S---MYGNNGYGKKAIQ 252
S Y N G+ AIQ
Sbjct: 342 SSSRTYKNPELGEIAIQ 358
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 312 bits (800), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 190/544 (34%), Positives = 289/544 (53%), Gaps = 23/544 (4%)
Query: 5 LGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPS------DR 58
G L A ++F + WNA R A YR M S D
Sbjct: 50 FGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDA 109
Query: 59 FTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANS 118
T ++ LKAC + S ++H I R G + + TTLLD Y+K G + A
Sbjct: 110 LTCSFTLKACARALCS----SAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYK 165
Query: 119 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
+F MP ++ SW+A+I + +A+EL+ +M E + VT+V+
Sbjct: 166 LFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRR--SEVTVVAALGACSHL 223
Query: 179 XXXXXXXXV-HGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDK-VKNPDVVSWNS 236
+ HG+ D+++ V NA I MY +CG + +VF++ VV+WN+
Sbjct: 224 GDVKEGENIFHGY----SNDNVI-VSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNT 278
Query: 237 LISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKY 296
+I+ + +G +A++IF+ + G+ P +S++ L AC HAGLVE G +F +M K
Sbjct: 279 MITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK- 337
Query: 297 RIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERA 356
+ M+HY C+VDLL RA RL EA +I M P P +W SLLG+ I+ + E+AE A
Sbjct: 338 GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIA 397
Query: 357 SAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYS 416
S + E+ N G++VLL+++YA W DV VR M + ++K+PG S+IE K I+
Sbjct: 398 SREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHE 457
Query: 417 FVSSEEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVA 476
F +S++ + Q ++ + ++ +++E GY QT +V +D+ E EKE L HSEKLAVA
Sbjct: 458 FYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVA 517
Query: 477 FGLI---NTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSC 533
+GL+ + +R+ NLR+C DCH K ISK REI+VRD RFH F+DG CSC
Sbjct: 518 YGLMMMDGADEESPVRVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSC 577
Query: 534 GEYW 537
++W
Sbjct: 578 RDFW 581
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 132/282 (46%), Gaps = 19/282 (6%)
Query: 82 KEIHANILRHGYEENIHVMTTLLD--VYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYA 139
K++ ++ L G+ ++ + + LL+ + FG +S+A +FR +P + W+A+I +A
Sbjct: 20 KQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTNDWNAIIRGFA 79
Query: 140 KNDMPVKALELFHQMVLEA--------CDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFI 191
+ P A + M+ ++ D++ S T+ + +H I
Sbjct: 80 GSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKAC----ARALCSSAMDQLHCQI 135
Query: 192 LRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAI 251
RRGL + + L+ Y + G++ ++FD++ DV SWN+LI+ + +A+
Sbjct: 136 NRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAM 195
Query: 252 QIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDL 311
++++ M +G+ S ++ + L ACSH G V+EG+ +F + I +D+
Sbjct: 196 ELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSN-----AAIDM 250
Query: 312 LGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 353
+ +D+A ++ E + W +++ +H A A
Sbjct: 251 YSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRA 292
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 104/240 (43%), Gaps = 14/240 (5%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y + G L A K+FDE R + WNA L R E +ELY++M GI T
Sbjct: 154 YSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTV 213
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYE-ENIHVMTTLLDVYAKFGCISYANSVF 120
L AC + +++G+ I HGY +N+ V +D+Y+K G + A VF
Sbjct: 214 VAALGACS----HLGDVKEGENIF-----HGYSNDNVIVSNAAIDMYSKCGFVDKAYQVF 264
Query: 121 RAMPAKNS-VSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
K S V+W+ MI +A + +ALE+F + LE P+ V+ ++
Sbjct: 265 EQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDK--LEDNGIKPDDVSYLAALTACRHAG 322
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN-PDVVSWNSLI 238
V + +G++ M ++ + R G + + + PD V W SL+
Sbjct: 323 LVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLL 382
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 312 bits (800), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 184/597 (30%), Positives = 293/597 (49%), Gaps = 68/597 (11%)
Query: 5 LGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYV 64
L S D + +F + ER ++ NA R L R E + + M G+ DR T+ +V
Sbjct: 73 LKSPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFV 132
Query: 65 LKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYA-------- 116
LK+ F G+ +HA L++ + + V +L+D+YAK G + +A
Sbjct: 133 LKSNSKLGFRWL----GRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESP 188
Query: 117 ---------------------------NSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALE 149
++FR+MP +NS SWS +I Y + +A +
Sbjct: 189 DRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQ 248
Query: 150 LFHQMVLEACDS-----------------------------IPNSVTMVSVXXXXXXXXX 180
LF M + S PN T+ +V
Sbjct: 249 LFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGA 308
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+HG+IL G+ + AL+ MY +CGE+ VF + + D++SW ++I
Sbjct: 309 LGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQG 368
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
+ +G +AIQ F M++ G P + F+ VL AC ++ V+ G F+SM Y I P
Sbjct: 369 WAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEP 428
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
++HY +VDLLGRA +L+EA +L+E+MP P T W +L +C+ H AE S L
Sbjct: 429 TLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNL 488
Query: 361 FELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 420
EL+P G+Y+ L +A DV+ R + KR+ ++ G S+IE+ ++ F +
Sbjct: 489 LELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAG 548
Query: 421 EEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLI 480
+ + +++ L ++ + ++GY P + +D++E EKE + HSEKLA+ G +
Sbjct: 549 DYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFL 608
Query: 481 NTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
T G TIRI KNLR+C DCH+ K++SK + R+IL+RD +FH F+DG CSCG+YW
Sbjct: 609 RTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 123/263 (46%), Gaps = 16/263 (6%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y + G L+ A+++F+ E+ + W + G E + Y +M G+ + +T
Sbjct: 237 YVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTI 296
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
VL AC S L G IH IL +G + + + T L+D+YAK G + A +VF
Sbjct: 297 AAVLSACSKSG----ALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFS 352
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
M K+ +SW+AMI +A + +A++ F QM+ P+ V ++V
Sbjct: 353 NMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSG--EKPDEVVFLAVLTACLNSSEV 410
Query: 182 XXXXXVHGFILRRGLD-SIMPVIN---ALITMYGRCGEISIGERVFDKVK-NPDVVSWNS 236
F LD +I P + ++ + GR G+++ + + + NPD+ +W +
Sbjct: 411 DLGL---NFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAA 467
Query: 237 LI-SMYGNNGYGKKAIQIFENMI 258
L + + GY ++A + +N++
Sbjct: 468 LYRACKAHKGY-RRAESVSQNLL 489
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G LDCA VF + I W A + A+ GR + ++ +RQM +SG D
Sbjct: 337 MYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVV 396
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ VL AC+ S L + L + E + ++D+ + G ++ A+ +
Sbjct: 397 FLAVLTACLNSSEVDLGLNFFDSMR---LDYAIEPTLKHYVLVVDLLGRAGKLNEAHELV 453
Query: 121 RAMPAK-NSVSWSAM 134
MP + +W+A+
Sbjct: 454 ENMPINPDLTTWAAL 468
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 300 bits (769), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 185/579 (31%), Positives = 285/579 (49%), Gaps = 51/579 (8%)
Query: 2 YHELGSLDCARKVFDET--RERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRF 59
Y G + A+K+FDE E+ W + + G ++L+ +M + D
Sbjct: 53 YASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDV 112
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCIS----- 114
+ + C E L ++ H ++ G ++ V L+D+Y K G +S
Sbjct: 113 SVVCLFGVCAKLE----DLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRI 168
Query: 115 --------------------------YANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKAL 148
VF MP +N+V+W+ M+ Y + L
Sbjct: 169 FEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVL 228
Query: 149 ELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGL--------DSIM 200
EL +MV C N VT+ S+ VH + L++ + D +M
Sbjct: 229 ELLAEMVFR-CGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVM 287
Query: 201 PVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQ 260
V AL+ MY +CG I VF ++ +VV+WN+L S +G G+ I +F MI +
Sbjct: 288 -VGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE 346
Query: 261 GVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDE 320
V P ++F VL ACSH+G+V+EG F S L Y + P ++HYACMVDLLGRA ++E
Sbjct: 347 -VKPDDLTFTAVLSACSHSGIVDEGWRCFHS-LRFYGLEPKVDHYACMVDLLGRAGLIEE 404
Query: 321 AIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAE 380
A L+ +MP P V GSLLGSC +H E+AER L ++ P N +L++++Y
Sbjct: 405 AEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVA 464
Query: 381 AKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTE 440
+R + KR ++K+PG S I V ++ F S + +P+ +++ L ++
Sbjct: 465 EGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIER 524
Query: 441 MKEQGYAPQTN--IVHYDLDEGEKERILLGHSEKLAVAFGLINTVKGETIRITKNLRLCE 498
++ GY P + + H + D EKE+ L HSEKLAV FGL+ T + + KNLR+C
Sbjct: 525 IRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICR 584
Query: 499 DCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
DCH+ K +SK +REI++RD NRFH F+ G CSC +YW
Sbjct: 585 DCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/345 (19%), Positives = 150/345 (43%), Gaps = 50/345 (14%)
Query: 64 VLKACVVSEFSVYPLQKGKEIHANILRHGYEE--NIHVMTTLLDVYAKFGCISYANSVFR 121
+L+ C F L+ GKE+HA + G ++ ++ L YA G + A +F
Sbjct: 12 LLRHCAHRSF----LRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFD 67
Query: 122 AMP--AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
+P K++V W+ ++ +++ + V +++LF +M + + + V++V +
Sbjct: 68 EIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVE--IDDVSVVCLFGVCAKLE 125
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVS------ 233
HG ++ G+ + + V NAL+ MYG+CG +S +R+F++++ VVS
Sbjct: 126 DLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLD 185
Query: 234 -------------------------WNSLISMYGNNGYGKKAIQIFENMIHQ-GVSPSYI 267
W +++ Y G+ ++ +++ M+ + G +++
Sbjct: 186 TVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFV 245
Query: 268 SFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHY------ACMVDLLGRANRLDEA 321
+ ++L AC+ +G + G+ + L K + Y +VD+ + +D +
Sbjct: 246 TLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSS 305
Query: 322 IKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA-ERASAMLFELEP 365
+ + M + W +L +H + + M+ E++P
Sbjct: 306 MNVFRLMR-KRNVVTWNALFSGLAMHGKGRMVIDMFPQMIREVKP 349
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 6/137 (4%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G++D + VF R+R + WNA F LAM G+G +++++ QM P D T
Sbjct: 295 MYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIREVKPDD-LT 353
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+T VL AC S + +G ++ +G E + ++D+ + G I A +
Sbjct: 354 FTAVLSACSHSGI----VDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILM 409
Query: 121 RAMPA-KNSVSWSAMIG 136
R MP N V +++G
Sbjct: 410 REMPVPPNEVVLGSLLG 426
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 152/449 (33%), Positives = 255/449 (56%), Gaps = 7/449 (1%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y + + A+ +F + + ++ A G + LE++R + I + T
Sbjct: 385 YFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITL 444
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
+L + + L+ G+E+H I++ G++ ++ ++D+YAK G ++ A +F
Sbjct: 445 VSILPVIGI----LLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFE 500
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
+ ++ VSW++MI A++D P A+++F QM + + V++ +
Sbjct: 501 RLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGI--CYDCVSISAALSACANLPSE 558
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY 241
+HGF+++ L S + + LI MY +CG + VF +K ++VSWNS+I+
Sbjct: 559 SFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAAC 618
Query: 242 GNNGYGKKAIQIFENMIHQ-GVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
GN+G K ++ +F M+ + G+ P I+F+ ++ +C H G V+EG F SM Y I P
Sbjct: 619 GNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQP 678
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
EHYAC+VDL GRA RL EA + ++ MPF P VWG+LLG+CR+H N ELAE AS+ L
Sbjct: 679 QQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKL 738
Query: 361 FELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 420
+L+P N+G YVL+++ +A A+ W V VR LM +R +QK+PG SWIE+ K+ + FVS
Sbjct: 739 MDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSG 798
Query: 421 EEDNPQIEKLRALLIKLSTEMKEQGYAPQ 449
+ ++P+ + +LL L E++ +GY PQ
Sbjct: 799 DVNHPESSHIYSLLNSLLGELRLEGYIPQ 827
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 167/347 (48%), Gaps = 16/347 (4%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y E G +D K+FD ++ IWN A G + +++ + M I + T+
Sbjct: 183 YLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTF 242
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
VL C S + G ++H ++ G + + +LL +Y+K G A+ +FR
Sbjct: 243 DCVLSVCA----SKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFR 298
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
M ++V+W+ MI Y ++ + ++L F++M+ + +P+++T S+
Sbjct: 299 MMSRADTVTWNCMISGYVQSGLMEESLTFFYEMI--SSGVLPDAITFSSLLPSVSKFENL 356
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY 241
+H +I+R + + + +ALI Y +C +S+ + +F + + DVV + ++IS Y
Sbjct: 357 EYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGY 416
Query: 242 GNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPG 301
+NG ++++F ++ +SP+ I+ +++L G++ K+ E L + I G
Sbjct: 417 LHNGLYIDSLEMFRWLVKVKISPNEITLVSILPV---IGILLALKLGRE--LHGFIIKKG 471
Query: 302 MEHY----ACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSC 344
++ ++D+ + R++ A ++ E + + W S++ C
Sbjct: 472 FDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRC 517
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 132/281 (46%), Gaps = 12/281 (4%)
Query: 1 MYHELGSL-DCARKVFD-ETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDR 58
MY GS DC + + + R +I WN+ + G + L Y +M G+ D
Sbjct: 79 MYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDV 138
Query: 59 FTYTYVLKACV-VSEFSVYPLQKGKEIHANILRH-GYEENIHVMTTLLDVYAKFGCISYA 116
T+ ++KACV + F KG + ++ + G + N V ++L+ Y ++G I
Sbjct: 139 STFPCLVKACVALKNF------KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVP 192
Query: 117 NSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXX 176
+ +F + K+ V W+ M+ YAK ++ F M ++ PN+VT V
Sbjct: 193 SKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQIS--PNAVTFDCVLSVCA 250
Query: 177 XXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNS 236
+HG ++ G+D + N+L++MY +CG ++F + D V+WN
Sbjct: 251 SKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNC 310
Query: 237 LISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACS 277
+IS Y +G ++++ F MI GV P I+F ++L + S
Sbjct: 311 MISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 5/171 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G ++ A ++F+ +R I WN+ A ++++RQM SGI D +
Sbjct: 485 MYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVS 544
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ L AC + GK IH +++H +++ +TL+D+YAK G + A +VF
Sbjct: 545 ISAALSACANLPSESF----GKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVF 600
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 171
+ M KN VSW+++I + +L LFH+MV E P+ +T + +
Sbjct: 601 KTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMV-EKSGIRPDQITFLEI 650
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 122/288 (42%), Gaps = 9/288 (3%)
Query: 78 LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSV--SWSAMI 135
L++GK++HA ++ + + + +L +YA G S +F + + S W+++I
Sbjct: 51 LRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSII 110
Query: 136 GCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRG 195
+ +N + +AL + +M+ P+ T + + + G
Sbjct: 111 SSFVRNGLLNQALAFYFKMLCFGVS--PDVSTFPCLVKACVALKNFKGIDFLSDTVSSLG 168
Query: 196 LDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFE 255
+D V ++LI Y G+I + ++FD+V D V WN +++ Y G I+ F
Sbjct: 169 MDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFS 228
Query: 256 NMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRA 315
M +SP+ ++F VL C+ L++ G L ++ G + ++ + +
Sbjct: 229 VMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNS-LLSMYSKC 287
Query: 316 NRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFEL 363
R D+A KL M W ++ + + L E + +E+
Sbjct: 288 GRFDDASKLFRMMS-RADTVTWNCMISG---YVQSGLMEESLTFFYEM 331
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/495 (33%), Positives = 259/495 (52%), Gaps = 41/495 (8%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G+++ A++VFDE +R + WN+ G E L++++ M S + D T
Sbjct: 196 MYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVT 255
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEEN-IHVMTTLLDVYAKFGCISYANSV 119
V+ AC S+ ++ G+E+H ++++ N I + +D+YAK I A +
Sbjct: 256 LASVISACA----SLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFI 311
Query: 120 FRAMP-------------------------------AKNSVSWSAMIGCYAKNDMPVKAL 148
F +MP +N VSW+A+I Y +N +AL
Sbjct: 312 FDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEAL 371
Query: 149 ELF----HQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVIN 204
LF + V S N + + HGF + G + + V N
Sbjct: 372 SLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGN 431
Query: 205 ALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSP 264
+LI MY +CG + G VF K+ D VSWN++I + NGYG +A+++F M+ G P
Sbjct: 432 SLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKP 491
Query: 265 SYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKL 324
+I+ I VL AC HAG VEEG+ F SM + + P +HY CMVDLLGRA L+EA +
Sbjct: 492 DHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSM 551
Query: 325 IEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMW 384
IE+MP +P +WGSLL +C++H N L + + L E+EP N+G YVLL+++YAE W
Sbjct: 552 IEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKW 611
Query: 385 SDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMK-E 443
DV +VRK M K + K PGCSWI+++ + F+ ++ +P+ +++ +LL L EM+ E
Sbjct: 612 EDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPE 671
Query: 444 QGYAPQTNIVHYDLD 458
Q + ++ ++D
Sbjct: 672 QDHTEIGSLSSEEMD 686
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 159/339 (46%), Gaps = 69/339 (20%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM------NWSGIP 55
Y + GSL+ R+VFD+ +R IY WN+ L +G +E L+R M W+ +
Sbjct: 65 YSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMV 124
Query: 56 S-----DR--------------------FTYTYVLKACVVSEFSVYPLQKGKEIHANILR 90
S DR +++ VL AC + + KG ++H+ I +
Sbjct: 125 SGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACS----GLNDMNKGVQVHSLIAK 180
Query: 91 HGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALEL 150
+ ++++ + L+D+Y+K G ++ A VF M +N VSW+++I C+ +N V+AL++
Sbjct: 181 SPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDV 240
Query: 151 FHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRG-LDSIMPVINALITM 209
F QM+LE+ P+ VT+ SV VHG +++ L + + + NA + M
Sbjct: 241 F-QMMLES-RVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDM 298
Query: 210 YGRCGEISIGERVFD-------------------------------KVKNPDVVSWNSLI 238
Y +C I +FD K+ +VVSWN+LI
Sbjct: 299 YAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALI 358
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACS 277
+ Y NG ++A+ +F + + V P++ SF +L AC+
Sbjct: 359 AGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACA 397
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 145/305 (47%), Gaps = 36/305 (11%)
Query: 56 SDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAK------ 109
+D + +L +C+ S+ S + + +HA++++ G+ I + L+D Y+K
Sbjct: 17 TDSSPFAKLLDSCIKSKLSAIYV---RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLED 73
Query: 110 -------------------------FGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMP 144
G + A+S+FR+MP ++ +W++M+ +A++D
Sbjct: 74 GRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRC 133
Query: 145 VKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVIN 204
+AL F M E + N + SV VH I + S + + +
Sbjct: 134 EEALCYFAMMHKEGF--VLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGS 191
Query: 205 ALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSP 264
AL+ MY +CG ++ +RVFD++ + +VVSWNSLI+ + NG +A+ +F+ M+ V P
Sbjct: 192 ALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEP 251
Query: 265 SYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKL 324
++ +V+ AC+ ++ G+ + ++ ++ + VD+ + +R+ EA +
Sbjct: 252 DEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFI 311
Query: 325 IEDMP 329
+ MP
Sbjct: 312 FDSMP 316
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 180/540 (33%), Positives = 283/540 (52%), Gaps = 21/540 (3%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 70
A VF+ + + + WN+ A G++ + ++ +M+ G+ DR T + +
Sbjct: 214 AWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYK 273
Query: 71 SEFSVYPLQKGK---EIHANILRHGYEENIHVMTTLLDVYAKFGCISYAN--SVFRAMP- 124
S + P + K ++H+ ++ G V T L+ VY++ Y + +F M
Sbjct: 274 SS-DLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEM-LEDYTDCYKLFMEMSH 331
Query: 125 AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXX 184
++ V+W+ +I +A D P +A+ LF Q+ E P+ T SV
Sbjct: 332 CRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLS--PDWYTFSSVLKACAGLVTARHA 388
Query: 185 XXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNN 244
+H +++ G + + N+LI Y +CG + + RVFD + + DVVSWNS++ Y +
Sbjct: 389 LSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLH 448
Query: 245 GYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 304
G + +F+ M ++P +FI +L ACSHAG VEEG +F SM K P + H
Sbjct: 449 GQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNH 505
Query: 305 YACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFEL- 363
YAC++D+L RA R EA ++I+ MP +P VW +LLGSCR H N L + A+ L EL
Sbjct: 506 YACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELV 565
Query: 364 EPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEED 423
EP N+ +Y+ +++IY +++ K M ++K P SW E+ K++ F S
Sbjct: 566 EPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRH 625
Query: 424 NPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERI-LLGHSEKLAVAFGLINT 482
P E + L +L + +KE GY P+ D+++ E+E LL HSEKLA+AF ++
Sbjct: 626 RPDKEAVYRELKRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEG 685
Query: 483 VKGET-----IRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
K I+I KN R+C DCH F K SK +EIL+RD NRFH F+D CSC +YW
Sbjct: 686 RKSSDCGVNLIQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGY--EENIHVMTTLLDVYAKFGCISYAN 117
Y + +AC L G +H ++L H Y +N+ + L+++YAK G I YA
Sbjct: 61 AYAALFQACAEQR----NLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYAR 116
Query: 118 SVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXX 177
VF MP +N VSW+A+I Y + + LF M L C PN T+ SV
Sbjct: 117 QVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM-LSHC--FPNEFTLSSV----LT 169
Query: 178 XXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGER---VFDKVKNPDVVSW 234
VHG L+ GL + V NA+I+MYGRC + + VF+ +K ++V+W
Sbjct: 170 SCRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTW 229
Query: 235 NSLISMYGNNGYGKKAIQIFENMIHQGV 262
NS+I+ + GKKAI +F M GV
Sbjct: 230 NSMIAAFQCCNLGKKAIGVFMRMHSDGV 257
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 193/444 (43%), Gaps = 69/444 (15%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G++ AR+VFD ER + W A G +E L+ M P++ FT
Sbjct: 105 MYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNE-FT 163
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKF--GCISY-AN 117
+ VL +C + GK++H L+ G +I+V ++ +Y + G +Y A
Sbjct: 164 LSSVLTSC--------RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAW 215
Query: 118 SVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQM-----------VLEACDSIPNSV 166
+VF A+ KN V+W++MI + ++ KA+ +F +M +L C S+ S
Sbjct: 216 TVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSS 275
Query: 167 TMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGE-ISIGERVFDK 225
+V +H ++ GL + V ALI +Y E + ++F +
Sbjct: 276 DLVP-------NEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFME 328
Query: 226 VKN-PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACS------- 277
+ + D+V+WN +I+ + ++AI +F + + +SP + +F +VL AC+
Sbjct: 329 MSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARH 387
Query: 278 ----HAGLVEEG----KILFESMLSKY----------RIHPGME-----HYACMVDLLGR 314
HA +++ G +L S++ Y R+ M+ + M+
Sbjct: 388 ALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSL 447
Query: 315 ANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFE----LEPWNAGN 370
++D + + + M P + +LL +C E R +FE L N +
Sbjct: 448 HGQVDSILPVFQKMDINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLN--H 505
Query: 371 YVLLADIYAEAKMWSDVKSVRKLM 394
Y + D+ + A+ +++ + V K M
Sbjct: 506 YACVIDMLSRAERFAEAEEVIKQM 529
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 285 bits (728), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 151/435 (34%), Positives = 247/435 (56%), Gaps = 6/435 (1%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 70
A +F E+ + W+ G E L ++ M G + T VL+AC
Sbjct: 217 AVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAA 276
Query: 71 SEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVS 130
+ + L++G++ H +R G E + V T L+D+Y K A +VF +P K+ VS
Sbjct: 277 A----HDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVS 332
Query: 131 WSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGF 190
W A+I + N M +++E F M+LE ++ P+++ MV V H +
Sbjct: 333 WVALISGFTLNGMAHRSIEEFSIMLLEN-NTRPDAILMVKVLGSCSELGFLEQAKCFHSY 391
Query: 191 ILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKA 250
+++ G DS + +L+ +Y RCG + +VF+ + D V W SLI+ YG +G G KA
Sbjct: 392 VIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKA 451
Query: 251 IQIFENMIHQG-VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMV 309
++ F +M+ V P+ ++F+++L ACSHAGL+ EG +F+ M++ YR+ P +EHYA +V
Sbjct: 452 LETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLV 511
Query: 310 DLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAG 369
DLLGR LD AI++ + MPF P P + G+LLG+CRIH N E+AE + LFELE +AG
Sbjct: 512 DLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAG 571
Query: 370 NYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEK 429
Y+L++++Y W +V+ +R + +R ++K S IE+++K++ FV+ +E +P+ E
Sbjct: 572 YYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEP 631
Query: 430 LRALLIKLSTEMKEQ 444
+ LL +L MKE
Sbjct: 632 VYGLLKELDLHMKED 646
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 166/349 (47%), Gaps = 10/349 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNW-SGIPSDRF 59
MY + G + A ++FDE + I W++ G + +E +R+M S + DR
Sbjct: 105 MYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRV 164
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
T ++ AC S + G+ +H ++R G+ ++ ++ +LL+ YAK A ++
Sbjct: 165 TLITLVSACTKLSNS----RLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNL 220
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F+ + K+ +SWS +I CY +N +AL +F+ M+ + + PN T++ V
Sbjct: 221 FKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTE--PNVATVLCVLQACAAAH 278
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
H +R+GL++ + V AL+ MY +C VF ++ DVVSW +LIS
Sbjct: 279 DLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALIS 338
Query: 240 MYGNNGYGKKAIQIFENM-IHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 298
+ NG ++I+ F M + P I + VL +CS G +E+ K F S + KY
Sbjct: 339 GFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKC-FHSYVIKYGF 397
Query: 299 HPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 347
A +V+L R L A K+ + + VW SL+ IH
Sbjct: 398 DSNPFIGASLVELYSRCGSLGNASKVFNGIALKD-TVVWTSLITGYGIH 445
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 176/354 (49%), Gaps = 9/354 (2%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 70
AR++F E +R++Y WN ++L+ + EE+L + M D FT LKAC
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG- 71
Query: 71 SEFSVYPLQKGKEIHANILRH-GYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSV 129
+ + G+ IH + + +++V ++L+ +Y K G + A +F + + V
Sbjct: 72 ---ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIV 128
Query: 130 SWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHG 189
+WS+M+ + KN P +A+E F +MV+ A D P+ VT++++ VHG
Sbjct: 129 TWSSMVSGFEKNGSPYQAVEFFRRMVM-ASDVTPDRVTLITLVSACTKLSNSRLGRCVHG 187
Query: 190 FILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKK 249
F++RRG + + ++N+L+ Y + +F + DV+SW+++I+ Y NG +
Sbjct: 188 FVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAE 247
Query: 250 AIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMV 309
A+ +F +M+ G P+ + + VL AC+ A +E+G+ E + K + ++ +V
Sbjct: 248 ALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK-GLETEVKVSTALV 306
Query: 310 DLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA-ERASAMLFE 362
D+ + +EA + +P W +L+ ++ A + E S ML E
Sbjct: 307 DMYMKCFSPEEAYAVFSRIP-RKDVVSWVALISGFTLNGMAHRSIEEFSIMLLE 359
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 282 bits (722), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 171/542 (31%), Positives = 284/542 (52%), Gaps = 12/542 (2%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y G +D A ++F E+ +NA G G + L+L+ M G+ F+
Sbjct: 361 YMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSL 420
Query: 62 TYVLKAC-VVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
T + AC +VSE V ++IH ++ G N + T LLD+ + ++ A +F
Sbjct: 421 TSAVDACGLVSEKKV-----SEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMF 475
Query: 121 RAMPAK--NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
P+ +S + +++IG YA+N +P KA+ LFH+ + E + V++ +
Sbjct: 476 DQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQ-KLFLDEVSLTLILAVCGTL 534
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
+H + L+ G S + + N+LI+MY +C + ++F+ ++ DV+SWNSLI
Sbjct: 535 GFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLI 594
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCAC--SHAGLVEEGKILFESMLSKY 296
S Y G +A+ ++ M + + P I+ V+ A + + + + LF SM + Y
Sbjct: 595 SCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIY 654
Query: 297 RIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERA 356
I P EHY V +LG L+EA I MP +P +V +LL SCRIH N +A+R
Sbjct: 655 DIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRV 714
Query: 357 SAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYS 416
+ ++ +P Y+L ++IY+ + W + +R+ M +R +K P SWI + KI+S
Sbjct: 715 AKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHS 774
Query: 417 FVSSEEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVA 476
F + + +PQ + + L L E + GY P T V ++DE K+ L HS KLAV
Sbjct: 775 FHARDTSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVT 834
Query: 477 FGLINT-VKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGE 535
+G++++ +G+ +R+ KN+ LC DCH F K+IS REI++RD + FH F +G CSC +
Sbjct: 835 YGILSSNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRD 894
Query: 536 YW 537
W
Sbjct: 895 LW 896
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 155/385 (40%), Gaps = 62/385 (16%)
Query: 6 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNW-SGIPSDRFTYTYV 64
S D K+FDE +R + WN +L G+ + +L+ +MN G D FT + +
Sbjct: 232 SSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTL 291
Query: 65 LKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKF-------------- 110
L +C S L +G+E+H +R G + + V L+ Y+KF
Sbjct: 292 LSSCTDSSV----LLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMM 347
Query: 111 -----------------GCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQ 153
G + A +F + KN+++++A++ + +N +KAL+LF
Sbjct: 348 AQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTD 407
Query: 154 MVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRC 213
M+ + S+T S +HGF ++ G + AL+ M RC
Sbjct: 408 MLQRGVELTDFSLT--SAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRC 465
Query: 214 GEISIGERVFDK-VKNPDVV-SWNSLISMYGNNGYGKKAIQIF-ENMIHQGVSPSYISFI 270
++ E +FD+ N D + S+I Y NG KA+ +F + Q + +S
Sbjct: 466 ERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLT 525
Query: 271 TVLCACSHAGLVEEGKILFESMLSKYRIH---------PGMEHYACMVDLLGRANRLDEA 321
+L C G E G Y+IH + ++ + + D+A
Sbjct: 526 LILAVCGTLGFREMG----------YQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDA 575
Query: 322 IKLIEDMPFEPGPTVWGSLLGSCRI 346
IK+ M E W SL+ SC I
Sbjct: 576 IKIFNTMR-EHDVISWNSLI-SCYI 598
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 160/367 (43%), Gaps = 50/367 (13%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSG-IPSDRFT 60
Y +LG A VF T+ + A + + E L+++ +M +G + + +T
Sbjct: 124 YLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYT 183
Query: 61 YTYVLKACV-VSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYAN-- 117
+ +L ACV VS FS+ G +IH I++ G+ ++ V +L+ +Y K S +
Sbjct: 184 FVAILTACVRVSRFSL-----GIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVL 238
Query: 118 SVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXX 177
+F +P ++ SW+ ++ K KA +LF++M + +S T+ ++
Sbjct: 239 KLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGV-DSFTLSTLLSSCTD 297
Query: 178 XXXXXXXXXVHGFILRRGLDSIMPVINALITMYGR------------------------- 212
+HG +R GL + V NALI Y +
Sbjct: 298 SSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEM 357
Query: 213 ------CGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSY 266
G + +F V + +++N+L++ + NG+G KA+++F +M+ +GV +
Sbjct: 358 ITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTD 417
Query: 267 ISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC----MVDLLGRANRLDEAI 322
S + + AC GLV E K+ + + I G C ++D+ R R+ +A
Sbjct: 418 FSLTSAVDAC---GLVSEKKV--SEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAE 472
Query: 323 KLIEDMP 329
++ + P
Sbjct: 473 EMFDQWP 479
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 282 bits (722), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 154/456 (33%), Positives = 255/456 (55%), Gaps = 9/456 (1%)
Query: 7 SLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLK 66
+++ A +F + + + W +G G L++Y+QM + + Y +
Sbjct: 162 TMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQM----LLENAEVTPYCIT 217
Query: 67 ACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK 126
V + S+ + GK+IHA++++ G++ N+ VM ++LD+Y + G +S A F M K
Sbjct: 218 IAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDK 277
Query: 127 NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXX 186
+ ++W+ +I ++D +AL +F + E+ +PN T S+
Sbjct: 278 DLITWNTLISELERSD-SSEALLMFQR--FESQGFVPNCYTFTSLVAACANIAALNCGQQ 334
Query: 187 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDK-VKNPDVVSWNSLISMYGNNG 245
+HG I RRG + + + NALI MY +CG I +RVF + V ++VSW S++ YG++G
Sbjct: 335 LHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHG 394
Query: 246 YGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHY 305
YG +A+++F+ M+ G+ P I F+ VL AC HAGLVE+G F M S+Y I+P + Y
Sbjct: 395 YGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIY 454
Query: 306 ACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAER-ASAMLFELE 364
C+VDLLGRA ++ EA +L+E MPF+P + WG++LG+C+ H + L R A+ + EL+
Sbjct: 455 NCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELK 514
Query: 365 PWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDN 424
P G YV+L+ IYA W D VRK+M +K G SWI V+ +++SF S++
Sbjct: 515 PKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMC 574
Query: 425 PQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEG 460
P + ++L L E +E GY P+ + + D + G
Sbjct: 575 PNASSVYSVLGLLIEETREAGYVPELDSLVNDQEVG 610
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 165/341 (48%), Gaps = 9/341 (2%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y E G ++ AR +FDE +R + W A A E + +M G + FT
Sbjct: 55 YFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTL 114
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFG-CISYANSVF 120
+ VLK+C + Y G +H +++ G E +++V ++++YA + A +F
Sbjct: 115 SSVLKSCRNMKVLAY----GALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIF 170
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
R + KN V+W+ +I + + L+++ QM+LE + P +T+
Sbjct: 171 RDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI--AVRASASIDS 228
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+H +++RG S +PV+N+++ +Y RCG +S + F ++++ D+++WN+LIS
Sbjct: 229 VTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISE 288
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
+ +A+ +F+ QG P+ +F +++ AC++ + G+ L + + +
Sbjct: 289 LERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRR-GFNK 346
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 341
+E ++D+ + + ++ ++ ++ W S++
Sbjct: 347 NVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMM 387
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 115/246 (46%), Gaps = 6/246 (2%)
Query: 98 HVMTTLLDV-YAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVL 156
H++ T L V Y + G + A S+F MP ++ V+W+AMI YA ++ +A E FH+MV
Sbjct: 45 HILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVK 104
Query: 157 EACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCG-E 215
+ PN T+ SV VHG +++ G++ + V NA++ MY C
Sbjct: 105 QGTS--PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVT 162
Query: 216 ISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCA 275
+ +F +K + V+W +LI+ + + G G +++++ M+ + + + A
Sbjct: 163 MEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRA 222
Query: 276 CSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPT 335
+ V GK + S++ K + ++DL R L EA +M +
Sbjct: 223 SASIDSVTTGKQIHASVI-KRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME-DKDLI 280
Query: 336 VWGSLL 341
W +L+
Sbjct: 281 TWNTLI 286
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 126/278 (45%), Gaps = 18/278 (6%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y G L A+ F E ++ + WN L E LL ++++ G + +T
Sbjct: 257 LYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSEALL-MFQRFESQGFVPNCYT 315
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+T ++ AC ++ L G+++H I R G+ +N+ + L+D+YAK G I + VF
Sbjct: 316 FTSLVAACA----NIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVF 371
Query: 121 -RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
+ +N VSW++M+ Y + +A+ELF +MV P+ + ++V
Sbjct: 372 GEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIR--PDRIVFMAVLSACRHAG 429
Query: 180 XXXXXXXVHGFILRR-GLDSIMPVINALITMYGRCGEISIGERVFDKVK-NPDVVSWNSL 237
+ G++ + N ++ + GR G+I + +++ PD +W ++
Sbjct: 430 LVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAI 489
Query: 238 IS---MYGNNGY-----GKKAIQIFENMIHQGVSPSYI 267
+ + +NG +K +++ M+ V SYI
Sbjct: 490 LGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYI 527
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 282 bits (722), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 156/462 (33%), Positives = 248/462 (53%), Gaps = 6/462 (1%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + SL+ A K+FD + +R W+A + G E ++L+ +M +GI +T
Sbjct: 265 MYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYT 324
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
VL AC + L++GK++H+ +L+ G+E ++ T L+D+YAK GC++ A F
Sbjct: 325 IVGVLNACS----DICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGF 380
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+ ++ W+++I Y +N +AL L+ +M + IPN TM SV
Sbjct: 381 DCLQERDVALWTSLISGYVQNSDNEEALILYRRM--KTAGIIPNDPTMASVLKACSSLAT 438
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
VHG ++ G +P+ +AL TMY +CG + G VF + N DVVSWN++IS
Sbjct: 439 LELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISG 498
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
+NG G +A+++FE M+ +G+ P ++F+ ++ ACSH G VE G F M + + P
Sbjct: 499 LSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDP 558
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
++HYACMVDLL RA +L EA + IE + G +W LL +C+ H EL A L
Sbjct: 559 KVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKL 618
Query: 361 FELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 420
L + YV L+ IY DV+ V K M + K GCSWIE+K + + FV
Sbjct: 619 MALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVG 678
Query: 421 EEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEK 462
+ +P IE+ + L+ +S +M E+G+ + + +EG +
Sbjct: 679 DTMHPMIEETKDLVCLVSRQMIEEGFVTVLDSSFVEEEEGTQ 720
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 163/343 (47%), Gaps = 9/343 (2%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVG---RGEELLELYRQMNWSGIPSDR 58
Y + G L A +F+ + + WN+ + G +++L+R+M I +
Sbjct: 59 YAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNA 118
Query: 59 FTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANS 118
+T + KA E S+ G++ HA +++ +I+V T+L+ +Y K G +
Sbjct: 119 YTLAGIFKA----ESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLK 174
Query: 119 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
VF MP +N+ +WS M+ YA +A+++F+ + E + + +V
Sbjct: 175 VFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAAT 234
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
+H ++ GL + + NAL+TMY +C ++ ++FD + + ++W++++
Sbjct: 235 IYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMV 294
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 298
+ Y NG +A+++F M G+ PS + + VL ACS +EEGK L S L K
Sbjct: 295 TGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQL-HSFLLKLGF 353
Query: 299 HPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 341
+ +VD+ +A L +A K + + E +W SL+
Sbjct: 354 ERHLFATTALVDMYAKAGCLADARKGFDCLQ-ERDVALWTSLI 395
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 170/380 (44%), Gaps = 43/380 (11%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEE---LLELYRQMNWSGIPSD 57
MY + G ++ KVF ER Y W+ A GR EE + L+ + G SD
Sbjct: 162 MYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSD 221
Query: 58 RFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYAN 117
YV A + S + + G++IH +++G + + L+ +Y+K ++ A
Sbjct: 222 -----YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEAC 276
Query: 118 SVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXX 177
+F + +NS++WSAM+ Y++N ++A++LF +M P+ T+V V
Sbjct: 277 KMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIK--PSEYTIVGVLNACSD 334
Query: 178 XXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSL 237
+H F+L+ G + + AL+ MY + G ++ + FD ++ DV W SL
Sbjct: 335 ICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSL 394
Query: 238 ISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKIL--------- 288
IS Y N ++A+ ++ M G+ P+ + +VL ACS +E GK +
Sbjct: 395 ISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGF 454
Query: 289 ---------FESMLSK----------YRIHPGME--HYACMVDLLGRANRLDEAIKLIED 327
+M SK +R P + + M+ L + DEA++L E+
Sbjct: 455 GLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEE 514
Query: 328 M---PFEPGPTVWGSLLGSC 344
M EP + +++ +C
Sbjct: 515 MLAEGMEPDDVTFVNIISAC 534
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 150/350 (42%), Gaps = 41/350 (11%)
Query: 78 LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGC 137
L G+ +H I+R G I L++ YAK G ++ A+S+F A+ K+ VSW+++I
Sbjct: 30 LVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITG 89
Query: 138 YAKN---DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 194
Y++N ++LF +M A D +PN+ T+ + H +++
Sbjct: 90 YSQNGGISSSYTVMQLFREM--RAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKM 147
Query: 195 GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIF 254
+ V +L+ MY + G + G +VF + + +W++++S Y G ++AI++F
Sbjct: 148 SSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVF 207
Query: 255 ENMI---HQGVSPSYI--SFITVLCACSHAGL--------VEEGKILF----ESMLSKYR 297
+ +G Y+ + ++ L A + GL ++ G + F ++++ Y
Sbjct: 208 NLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYS 267
Query: 298 IHPGMEHYACMVDLLGRANRLD---------------EAIKLIEDM---PFEPGPTVWGS 339
+ M D G N + EA+KL M +P
Sbjct: 268 KCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVG 327
Query: 340 LLGSCRIHCNAELAERASAMLFELE-PWNAGNYVLLADIYAEAKMWSDVK 388
+L +C C E ++ + L +L + L D+YA+A +D +
Sbjct: 328 VLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADAR 377
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 282 bits (721), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 162/460 (35%), Positives = 238/460 (51%), Gaps = 38/460 (8%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y + G L AR VFD ER + WN A G E L Y++ SGI + F++
Sbjct: 123 YVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSF 182
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEEN------------------------- 96
+L ACV S LQ ++ H +L G+ N
Sbjct: 183 AGLLTACVKSR----QLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFD 238
Query: 97 ------IHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALEL 150
IH+ TTL+ YAK G + A +F MP KN VSW+A+I Y + +AL+L
Sbjct: 239 EMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDL 298
Query: 151 FHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMY 210
F +M+ A P T S +HG+++R + VI++LI MY
Sbjct: 299 FRKMI--ALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMY 356
Query: 211 GRCGEISIGERVFDKVKNP-DVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISF 269
+ G + ERVF + D V WN++IS +G G KA+++ ++MI V P+ +
Sbjct: 357 SKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTL 416
Query: 270 ITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMP 329
+ +L ACSH+GLVEEG FESM ++ I P EHYAC++DLLGRA E ++ IE+MP
Sbjct: 417 VVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMP 476
Query: 330 FEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKS 389
FEP +W ++LG CRIH N EL ++A+ L +L+P ++ Y+LL+ IYA+ W V+
Sbjct: 477 FEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEK 536
Query: 390 VRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEK 429
+R +M KR + K SWIE++KK+ +F S+ + K
Sbjct: 537 LRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARK 576
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 130/322 (40%), Gaps = 43/322 (13%)
Query: 81 GKEIHA-NILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYA 139
GK I A + + N++ ++ Y K G + A VF +MP ++ VSW+ M+ YA
Sbjct: 96 GKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYA 155
Query: 140 KNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSI 199
++ +AL + + N + + HG +L G S
Sbjct: 156 QDGNLHEALWFYKEFRRSGIKF--NEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSN 213
Query: 200 MPVINALITMYGRCGEISIGERVFDKVKNPDV---------------------------- 231
+ + ++I Y +CG++ +R FD++ D+
Sbjct: 214 VVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPE 273
Query: 232 ---VSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKIL 288
VSW +LI+ Y G G +A+ +F MI GV P +F + LCA + + GK +
Sbjct: 274 KNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEI 333
Query: 289 FESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHC 348
M+ + + P + ++D+ ++ L+ + ++ + W +++ + H
Sbjct: 334 HGYMI-RTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQH- 391
Query: 349 NAELAERASAML-----FELEP 365
L +A ML F ++P
Sbjct: 392 --GLGHKALRMLDDMIKFRVQP 411
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 159/445 (35%), Positives = 245/445 (55%), Gaps = 10/445 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEEL---LELYRQMNWSGIPSD 57
MY + L ARKVFD + ++NA + +G EL L ++R M + I
Sbjct: 394 MYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPS 453
Query: 58 RFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYAN 117
T+ +L+A S+ L K+IH + ++G +I + L+DVY+ C+ +
Sbjct: 454 LLTFVSLLRASA----SLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSR 509
Query: 118 SVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXX 177
VF M K+ V W++M Y + +AL LF + L+ P+ T ++
Sbjct: 510 LVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLF--LELQLSRERPDEFTFANMVTAAGN 567
Query: 178 XXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSL 237
H +L+RGL+ + NAL+ MY +CG + FD + DVV WNS+
Sbjct: 568 LASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSV 627
Query: 238 ISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYR 297
IS Y N+G GKKA+Q+ E M+ +G+ P+YI+F+ VL ACSHAGLVE+G FE ML ++
Sbjct: 628 ISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFG 686
Query: 298 IHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERAS 357
I P EHY CMV LLGRA RL++A +LIE MP +P VW SLL C N ELAE A+
Sbjct: 687 IEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAA 746
Query: 358 AMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSF 417
M +P ++G++ +L++IYA MW++ K VR+ M + K PG SWI + K+++ F
Sbjct: 747 EMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIF 806
Query: 418 VSSEEDNPQIEKLRALLIKLSTEMK 442
+S ++ + + ++ +L L +++
Sbjct: 807 LSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 156/321 (48%), Gaps = 19/321 (5%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y + G++D AR VFD E++ W +GR L+L+ Q+ + D +
Sbjct: 193 YLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYIL 252
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
+ VL AC + F L+ GK+IHA+ILR+G E + +M L+D Y K G + A+ +F
Sbjct: 253 STVLSACSILPF----LEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFN 308
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
MP KN +SW+ ++ Y +N + +A+ELF M P+ S+
Sbjct: 309 GMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLK--PDMYACSSILTSCASLHAL 366
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY 241
VH + ++ L + V N+LI MY +C ++ +VFD DVV +N++I Y
Sbjct: 367 GFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGY 426
Query: 242 GNNGYG---KKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 298
G +A+ IF +M + + PS ++F+++L A A L G LSK +I
Sbjct: 427 SRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRAS--ASLTSLG-------LSK-QI 476
Query: 299 HPGMEHYACMVDLLGRANRLD 319
H M Y +D+ + +D
Sbjct: 477 HGLMFKYGLNLDIFAGSALID 497
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 169/340 (49%), Gaps = 32/340 (9%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEE----LLELYRQMNWSGIPS 56
+Y G + ARKVF++ ER + W+ A G EE LE +R S P+
Sbjct: 88 LYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDS--PN 145
Query: 57 DRFTYTYVLKACV----VSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGC 112
+ +++ +AC + V+ LQ + +++ G++ +++V T L+D Y K G
Sbjct: 146 EYILSSFI-QACSGLDGRGRWMVFQLQ------SFLVKSGFDRDVYVGTLLIDFYLKDGN 198
Query: 113 ISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVX 172
I YA VF A+P K++V+W+ MI K +L+LF+Q++ + + +P+ + +V
Sbjct: 199 IDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMED--NVVPDGYILSTVL 256
Query: 173 XXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVV 232
+H ILR GL+ ++N LI Y +CG + ++F+ + N +++
Sbjct: 257 SACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNII 316
Query: 233 SWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACS--HAGLVEEGKILFE 290
SW +L+S Y N K+A+++F +M G+ P + ++L +C+ HA + F
Sbjct: 317 SWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHA-------LGFG 369
Query: 291 SMLSKYRIHP--GMEHYAC--MVDLLGRANRLDEAIKLIE 326
+ + Y I G + Y ++D+ + + L +A K+ +
Sbjct: 370 TQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFD 409
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 113/260 (43%), Gaps = 5/260 (1%)
Query: 84 IHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDM 143
+H I+ G E + ++ L+++Y++ G + YA VF MP +N VSWS M+ + +
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 144 PVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXX--XXXXVHGFILRRGLDSIMP 201
++L +F + DS PN + S + F+++ G D +
Sbjct: 126 YEESLVVFLEFWRTRKDS-PNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVY 184
Query: 202 VINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG 261
V LI Y + G I VFD + V+W ++IS G ++Q+F ++
Sbjct: 185 VGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDN 244
Query: 262 VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEA 321
V P TVL ACS +E GK + +L +Y + ++D + R+ A
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHIL-RYGLEMDASLMNVLIDSYVKCGRVIAA 303
Query: 322 IKLIEDMPFEPGPTVWGSLL 341
KL MP W +LL
Sbjct: 304 HKLFNGMP-NKNIISWTTLL 322
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 154/475 (32%), Positives = 261/475 (54%), Gaps = 42/475 (8%)
Query: 6 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEE---LLELYRQMNWSGIPSDRFTYT 62
G L A VF Y+ N RAL+++ + +YR++ D FT+
Sbjct: 61 GHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFP 120
Query: 63 YVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVY--------------- 107
+VLK V V + G++IH ++ G++ ++HV+T L+ +Y
Sbjct: 121 FVLKIAV----RVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDE 176
Query: 108 ----------------AKFGCISYANSVFRAMP--AKNSVSWSAMIGCYAKNDMPVKALE 149
K G + A S+ MP +N VSW+ +I YAK+ +A+E
Sbjct: 177 MLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIE 236
Query: 150 LFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITM 209
+F +M++E + P+ VT+++V + ++ RG++ + + NA+I M
Sbjct: 237 VFQRMLMENVE--PDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDM 294
Query: 210 YGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISF 269
Y + G I+ VF+ V +VV+W ++I+ +G+G +A+ +F M+ GV P+ ++F
Sbjct: 295 YAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTF 354
Query: 270 ITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMP 329
I +L ACSH G V+ GK LF SM SKY IHP +EHY CM+DLLGRA +L EA ++I+ MP
Sbjct: 355 IAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMP 414
Query: 330 FEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKS 389
F+ +WGSLL + +H + EL ERA + L +LEP N+GNY+LLA++Y+ W + +
Sbjct: 415 FKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRM 474
Query: 390 VRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKEQ 444
+R +M ++K+ G S IEV+ ++Y F+S + +PQ+E++ +L ++ +++ +
Sbjct: 475 MRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEMDLQIQSK 529
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 127/308 (41%), Gaps = 44/308 (14%)
Query: 78 LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGC 137
L+ K+ H ++ G + + ++ + G + YA SVF P N+ + MI
Sbjct: 28 LKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRA 87
Query: 138 YAKNDMP-VKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGL 196
+ D P ++ + L A + P++ T V +HG ++ G
Sbjct: 88 LSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGF 147
Query: 197 DSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGN------------- 243
DS + V+ LI MY CG + ++FD++ DV WN+L++ YG
Sbjct: 148 DSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEM 207
Query: 244 ---------------NGYGK-----KAIQIFENMIHQGVSPSYISFITVLCACSHAGLVE 283
+GY K +AI++F+ M+ + V P ++ + VL AC+ G +E
Sbjct: 208 MPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLE 267
Query: 284 EGKILFESMLSKYRIHPGMEHYACM----VDLLGRANRLDEAIKLIEDMPFEPGPTVWGS 339
G+ + Y H GM + +D+ ++ + +A+ + E + E W +
Sbjct: 268 LGE-----RICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVN-ERNVVTWTT 321
Query: 340 LLGSCRIH 347
++ H
Sbjct: 322 IIAGLATH 329
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G++ A VF+ ER + W LA G G E L ++ +M +G+ + T
Sbjct: 294 MYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVT 353
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANIL-RHGYEENIHVMTTLLDVYAKFGCISYANSV 119
+ +L AC V + GK + ++ ++G NI ++D+ + G + A+ V
Sbjct: 354 FIAILSACS----HVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEV 409
Query: 120 FRAMPAK-NSVSWSAMIG 136
++MP K N+ W +++
Sbjct: 410 IKSMPFKANAAIWGSLLA 427
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 157/415 (37%), Positives = 220/415 (53%), Gaps = 10/415 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G +D AR VFD R + W G E LEL R M + G+ + T
Sbjct: 262 MYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVT 321
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
++ C + GK +H +R +I + T+L+ +YAK + VF
Sbjct: 322 IASLVSVC----GDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVF 377
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
++ WSA+I +N++ AL LF +M E D PN T+ S+
Sbjct: 378 SGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRRE--DVEPNIATLNSLLPAYAALAD 435
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFD----KVKNPDVVSWNS 236
+H ++ + G S + L+ +Y +CG + ++F+ K K+ DVV W +
Sbjct: 436 LRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGA 495
Query: 237 LISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKY 296
LIS YG +G G A+Q+F M+ GV+P+ I+F + L ACSH+GLVEEG LF ML Y
Sbjct: 496 LISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHY 555
Query: 297 RIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERA 356
+ HY C+VDLLGRA RLDEA LI +PFEP TVWG+LL +C H N +L E A
Sbjct: 556 KTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMA 615
Query: 357 SAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVK 411
+ LFELEP N GNYVLLA+IYA W D++ VR +M L+K PG S IE++
Sbjct: 616 ANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIR 670
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 162/346 (46%), Gaps = 12/346 (3%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIP--SDRF 59
Y G + ARK+F+E + ++ +N R G + + ++ +M G+ D +
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
TY +V KA + ++ G +H ILR + + +V LL +Y FG + A V
Sbjct: 119 TYPFVAKAA----GELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDV 174
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F M ++ +SW+ MI Y +N AL +F MV E+ D + T+VS+
Sbjct: 175 FDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVD--LDHATIVSMLPVCGHLK 232
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
VH + + L + V NAL+ MY +CG + VFD+++ DV++W +I+
Sbjct: 233 DLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMIN 292
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
Y +G + A+++ M +GV P+ ++ +++ C A V +GK L + +++
Sbjct: 293 GYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCL-HGWAVRQQVY 351
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMP-FEPGPTVWGSLLGSC 344
+ ++ + + R+D ++ + GP W +++ C
Sbjct: 352 SDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGP--WSAIIAGC 395
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 127/244 (52%), Gaps = 2/244 (0%)
Query: 78 LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGC 137
+ K K +H +++ G H+++TL YA G I+YA +F MP + +S++ +I
Sbjct: 31 ISKTKALHCHVITGGRVSG-HILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRM 89
Query: 138 YAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD 197
Y + + A+ +F +MV E +P+ T V VHG ILR
Sbjct: 90 YVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFG 149
Query: 198 SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM 257
V NAL+ MY G++ + VFD +KN DV+SWN++IS Y NGY A+ +F+ M
Sbjct: 150 RDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWM 209
Query: 258 IHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANR 317
+++ V + + +++L C H +E G+ + + ++ + R+ +E +V++ + R
Sbjct: 210 VNESVDLDHATIVSMLPVCGHLKDLEMGRNVHK-LVEEKRLGDKIEVKNALVNMYLKCGR 268
Query: 318 LDEA 321
+DEA
Sbjct: 269 MDEA 272
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 154/357 (43%), Gaps = 12/357 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY G ++ AR VFD + R + WN G + L ++ M + D T
Sbjct: 161 MYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHAT 220
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+L C + L+ G+ +H + + I V L+++Y K G + A VF
Sbjct: 221 IVSMLPVC----GHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVF 276
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
M ++ ++W+ MI Y ++ ALEL M E PN+VT+ S+
Sbjct: 277 DRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVR--PNAVTIASLVSVCGDALK 334
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+HG+ +R+ + S + + +LI+MY +C + + RVF W+++I+
Sbjct: 335 VNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAG 394
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKIL-FESMLSKYRIH 299
N A+ +F+ M + V P+ + ++L A +A L + + + L+K
Sbjct: 395 CVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA--YAALADLRQAMNIHCYLTKTGFM 452
Query: 300 PGMEHYACMVDLLGRANRLDEAIKL---IEDMPFEPGPTVWGSLLGSCRIHCNAELA 353
++ +V + + L+ A K+ I++ +WG+L+ +H + A
Sbjct: 453 SSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNA 509
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 143/445 (32%), Positives = 253/445 (56%), Gaps = 7/445 (1%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY G L+ AR+VFD+ WN LA G +E + ++ QM SG D +
Sbjct: 314 MYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAIS 373
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
L++ + ++ L +G +IH+ I++ G+ ++ V +LL +Y + ++F
Sbjct: 374 ----LRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLF 429
Query: 121 RAMPAK-NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
+SVSW+ ++ +++ PV+ L LF M++ C+ P+ +TM ++
Sbjct: 430 EDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECE--PDHITMGNLLRGCVEIS 487
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
VH + L+ GL + N LI MY +CG + R+FD + N DVVSW++LI
Sbjct: 488 SLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIV 547
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
Y +G+G++A+ +F+ M G+ P++++F+ VL ACSH GLVEEG L+ +M +++ I
Sbjct: 548 GYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGIS 607
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAM 359
P EH +C+VDLL RA RL+EA + I++M EP VW +LL +C+ N LA++A+
Sbjct: 608 PTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAEN 667
Query: 360 LFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVS 419
+ +++P+N+ +VLL ++A + W + +R M K ++K+PG SWIE++ KI+ F +
Sbjct: 668 ILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFA 727
Query: 420 SEEDNPQIEKLRALLIKLSTEMKEQ 444
+ +P+ + + +L + ++M ++
Sbjct: 728 EDIFHPERDDIYTVLHNIWSQMLDE 752
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 159/347 (45%), Gaps = 6/347 (1%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + GSL AR+VFD ER + + + + G+G E + LY +M + D+F
Sbjct: 111 MYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFA 170
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ ++KAC S + GK++HA +++ ++ L+ +Y +F +S A+ VF
Sbjct: 171 FGSIIKACASSS----DVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVF 226
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+P K+ +SWS++I +++ +AL +M L PN S
Sbjct: 227 YGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEM-LSFGVFHPNEYIFGSSLKACSSLLR 285
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+HG ++ L +L MY RCG ++ RVFD+++ PD SWN +I+
Sbjct: 286 PDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAG 345
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
NNGY +A+ +F M G P IS ++LCA + + +G + S + K+
Sbjct: 346 LANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQG-MQIHSYIIKWGFLA 404
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 347
+ ++ + + L L ED W ++L +C H
Sbjct: 405 DLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQH 451
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 5/217 (2%)
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
TY+ C S S L +G++IH +IL + + + +L +Y K G + A VF
Sbjct: 69 TYISLICACS--SSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFD 126
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
MP +N VS++++I Y++N +A+ L+ +M+ E D +P+ S+
Sbjct: 127 FMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQE--DLVPDQFAFGSIIKACASSSDV 184
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY 241
+H +++ S + NALI MY R ++S RVF + D++SW+S+I+ +
Sbjct: 185 GLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGF 244
Query: 242 GNNGYGKKAIQIFENMIHQGV-SPSYISFITVLCACS 277
G+ +A+ + M+ GV P+ F + L ACS
Sbjct: 245 SQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 80/156 (51%), Gaps = 2/156 (1%)
Query: 187 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 246
+H IL + N +++MYG+CG + VFD + ++VS+ S+I+ Y NG
Sbjct: 89 IHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQ 148
Query: 247 GKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA 306
G +AI+++ M+ + + P +F +++ AC+ + V GK L ++ K +
Sbjct: 149 GAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVI-KLESSSHLIAQN 207
Query: 307 CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLG 342
++ + R N++ +A ++ +P + + W S++
Sbjct: 208 ALIAMYVRFNQMSDASRVFYGIPMKDLIS-WSSIIA 242
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 142/425 (33%), Positives = 235/425 (55%), Gaps = 7/425 (1%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y G D A ++FD ++ + W A G E + + +M +G+ ++ T
Sbjct: 148 YSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTV 207
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEE-NIHVMTTLLDVYAKFGCISYANSVF 120
VLKA V ++ G+ +H L G + ++ + ++L+D+Y K C A VF
Sbjct: 208 VSVLKAAG----KVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVF 263
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
MP++N V+W+A+I Y ++ K + +F +M+ D PN T+ SV
Sbjct: 264 DEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEML--KSDVAPNEKTLSSVLSACAHVGA 321
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
VH ++++ ++ LI +Y +CG + VF+++ +V +W ++I+
Sbjct: 322 LHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMING 381
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
+ +GY + A +F M+ VSP+ ++F+ VL AC+H GLVEEG+ LF SM ++ + P
Sbjct: 382 FAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEP 441
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
+HYACMVDL GR L+EA LIE MP EP VWG+L GSC +H + EL + A++ +
Sbjct: 442 KADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRV 501
Query: 361 FELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 420
+L+P ++G Y LLA++Y+E++ W +V VRK M + + K PG SWIEVK K+ F++
Sbjct: 502 IKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAF 561
Query: 421 EEDNP 425
++ P
Sbjct: 562 DDKKP 566
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 166/349 (47%), Gaps = 18/349 (5%)
Query: 11 ARKVFDETRERTIYIWNAF---FRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA 67
AR++ + + +I +W++ F + R L YR M +G+ R T+ +LKA
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLA-YRHMRRNGVIPSRHTFPPLLKA 113
Query: 68 CVVSEFSVYPLQKGK--EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA 125
V+ L+ + HA+I++ G + + V +L+ Y+ G +A+ +F
Sbjct: 114 -------VFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAED 166
Query: 126 KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXX 185
K+ V+W+AMI + +N +A+ F +M + N +T+VSV
Sbjct: 167 KDVVTWTAMIDGFVRNGSASEAMVYFVEM--KKTGVAANEMTVVSVLKAAGKVEDVRFGR 224
Query: 186 XVHGFILRRG-LDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNN 244
VHG L G + + + ++L+ MYG+C ++VFD++ + +VV+W +LI+ Y +
Sbjct: 225 SVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQS 284
Query: 245 GYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 304
K + +FE M+ V+P+ + +VL AC+H G + G+ + M+ K I
Sbjct: 285 RCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMI-KNSIEINTTA 343
Query: 305 YACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 353
++DL + L+EAI + E + E W +++ H A A
Sbjct: 344 GTTLIDLYVKCGCLEEAILVFERL-HEKNVYTWTAMINGFAAHGYARDA 391
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 135/328 (41%), Gaps = 41/328 (12%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + D A+KVFDE R + W A ++ + ++ +M S + + T
Sbjct: 249 MYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKT 308
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ VL AC V L +G+ +H ++++ E N TTL+D+Y K GC+ A VF
Sbjct: 309 LSSVLSACA----HVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVF 364
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+ KN +W+AMI +A + A +LF+ M+ + PN VT ++V
Sbjct: 365 ERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTML--SSHVSPNEVTFMAV--------- 413
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
HG ++ G ++M GR P + ++ +
Sbjct: 414 --LSACAHGGLVEEGR-------RLFLSMKGRFN------------MEPKADHYACMVDL 452
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
+G G ++A + E M + P+ + + + +C E GK ++ H
Sbjct: 453 FGRKGLLEEAKALIERM---PMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHS 509
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDM 328
G Y + +L + DE ++ + M
Sbjct: 510 G--RYTLLANLYSESQNWDEVARVRKQM 535
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 151/449 (33%), Positives = 246/449 (54%), Gaps = 8/449 (1%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM--NWSGIPSDR 58
+Y + G A VF E+ + W + L G+ +E L+++ M + + D
Sbjct: 417 LYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDS 476
Query: 59 FTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANS 118
T V AC E L+ G ++H ++++ G N+ V ++L+D+Y+K G A
Sbjct: 477 DIMTSVTNACAGLE----ALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALK 532
Query: 119 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
VF +M +N V+W++MI CY++N++P +++LF+ M+ + P+SV++ SV
Sbjct: 533 VFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGI--FPDSVSITSVLVAISST 590
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
+HG+ LR G+ S + NALI MY +CG E +F K+++ +++WN +I
Sbjct: 591 ASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMI 650
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 298
YG++G A+ +F+ M G SP ++F++++ AC+H+G VEEGK +FE M Y I
Sbjct: 651 YGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGI 710
Query: 299 HPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASA 358
P MEHYA MVDLLGRA L+EA I+ MP E ++W LL + R H N EL ++
Sbjct: 711 EPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAE 770
Query: 359 MLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFV 418
L +EP YV L ++Y EA + ++ + LM ++ L K PGCSWIEV + F
Sbjct: 771 KLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFF 830
Query: 419 SSEEDNPQIEKLRALLIKLSTEMKEQGYA 447
S +P ++ +L +L + M ++ A
Sbjct: 831 SGGSSSPMKAEIFNVLNRLKSNMVDEDKA 859
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 140/288 (48%), Gaps = 4/288 (1%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G + A VF ++ + IWNA A A G L+L+ M + D FT
Sbjct: 316 MYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFT 375
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ V+ C V Y GK +HA + + + + + LL +Y+K GC A VF
Sbjct: 376 LSNVISCCSVLGLYNY----GKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVF 431
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
++M K+ V+W ++I KN +AL++F M + P+S M SV
Sbjct: 432 KSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEA 491
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
VHG +++ GL + V ++LI +Y +CG + +VF + ++V+WNS+IS
Sbjct: 492 LRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISC 551
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKIL 288
Y N + +I +F M+ QG+ P +S +VL A S + +GK L
Sbjct: 552 YSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSL 599
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 163/359 (45%), Gaps = 25/359 (6%)
Query: 1 MYHELGSLDCARKVFDETRE-------RTIYIWNAFFRALAMVGRGEELLELYRQMNWSG 53
MY + G LD A +VFD + R + +WN+ R +E + +R+M G
Sbjct: 104 MYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFG 163
Query: 54 IPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCI 113
+ D F+ + V+ V+ + + ++GK+IH +LR+ + + + T L+D+Y KFG
Sbjct: 164 VRPDAFSLSIVVS--VMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLS 221
Query: 114 SYANSVFRAMPAK-NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVX 172
A VF + K N V W+ MI + + + +L+L+ + NSV +VS
Sbjct: 222 IDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYML-------AKNNSVKLVSTS 274
Query: 173 XXXXXXXXXXXXXX-----VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK 227
+H +++ GL + V +L++MY +CG + E VF V
Sbjct: 275 FTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVV 334
Query: 228 NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKI 287
+ + WN++++ Y N YG A+ +F M + V P + V+ CS GL GK
Sbjct: 335 DKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKS 394
Query: 288 LFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL-GSCR 345
+ + L K I + ++ L + +A + + M E WGSL+ G C+
Sbjct: 395 V-HAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSME-EKDMVAWGSLISGLCK 451
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 123/262 (46%), Gaps = 13/262 (4%)
Query: 27 NAFFRALAMVGRGEELLELYRQMNWSG-IPSDRFTYTYVLKACVVSEFSVYPLQKGKEIH 85
N+ RAL G + L LY + + S + FT+ +LKAC ++ L GK IH
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACS----ALTNLSYGKTIH 83
Query: 86 ANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF-------RAMPAKNSVSWSAMIGCY 138
+++ G+ + + T+L+++Y K G + YA VF + A++ W++MI Y
Sbjct: 84 GSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGY 143
Query: 139 AKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDS 198
K + + F +M++ S+++V +HGF+LR LD+
Sbjct: 144 FKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDT 203
Query: 199 IMPVINALITMYGRCGEISIGERVFDKVKN-PDVVSWNSLISMYGNNGYGKKAIQIFENM 257
+ ALI MY + G RVF ++++ +VV WN +I +G +G + ++ ++
Sbjct: 204 DSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLA 263
Query: 258 IHQGVSPSYISFITVLCACSHA 279
+ V SF L ACS +
Sbjct: 264 KNNSVKLVSTSFTGALGACSQS 285
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 275 bits (703), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 175/544 (32%), Positives = 270/544 (49%), Gaps = 52/544 (9%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G L+ ARKVFD + + +Y WN+ G + EL+ +M
Sbjct: 396 MYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQ---------- 445
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
AN+ NI T++ Y K G A +F
Sbjct: 446 ------------------------DANL-----RPNIITWNTMISGYIKNGDEGEAMDLF 476
Query: 121 RAMP-----AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXX 175
+ M +N+ +W+ +I Y +N +ALELF +M +PNSVT++S+
Sbjct: 477 QRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRF--MPNSVTILSLLPAC 534
Query: 176 XXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWN 235
+HG +LRR LD+I V NAL Y + G+I +F ++ D+++WN
Sbjct: 535 ANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWN 594
Query: 236 SLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSK 295
SLI Y +G A+ +F M QG++P+ + +++ A G V+EGK +F S+ +
Sbjct: 595 SLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIAND 654
Query: 296 YRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAER 355
Y I P +EH + MV L GRANRL+EA++ I++M + +W S L CRIH + ++A
Sbjct: 655 YHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIH 714
Query: 356 ASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIY 415
A+ LF LEP N +++ IYA K +L+K G SWIEV+ I+
Sbjct: 715 AAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIH 774
Query: 416 SFVSSEEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAV 475
+F + ++ + L L+ K+S + + Q N + +EG +E + HSEK A+
Sbjct: 775 TFTTGDQSKLCTDVLYPLVEKMS---RLDNRSDQYNGELWIEEEGREETCGI-HSEKFAM 830
Query: 476 AFGLINT--VKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSC 533
AFGLI++ TIRI KNLR+C DCH K++SK +IL+ D H F++G CSC
Sbjct: 831 AFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSC 890
Query: 534 GEYW 537
+YW
Sbjct: 891 KDYW 894
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 149/347 (42%), Gaps = 40/347 (11%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y + G LD A K F RER + WN+ A G+ EE +EL ++M GI T
Sbjct: 225 VYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVT 284
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ NIL GY + + +D+ K VF
Sbjct: 285 W-------------------------NILIGGYNQ-LGKCDAAMDLMQKMETFGITADVF 318
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+W+AMI N M +AL++F +M L +PN+VT++S
Sbjct: 319 ---------TWTAMISGLIHNGMRYQALDMFRKMFLAGV--VPNAVTIMSAVSACSCLKV 367
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
VH ++ G + V N+L+ MY +CG++ +VFD VKN DV +WNS+I+
Sbjct: 368 INQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITG 427
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
Y GY KA ++F M + P+ I++ T++ G E LF+ M ++
Sbjct: 428 YCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQR 487
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFE---PGPTVWGSLLGSC 344
+ ++ + + DEA++L M F P SLL +C
Sbjct: 488 NTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 132/260 (50%), Gaps = 14/260 (5%)
Query: 38 RGEELLELYRQMN---WSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGY- 93
R LLE + ++ G R TY +L++C+ S + G+ +HA R G
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSG----SIHLGRILHA---RFGLF 110
Query: 94 -EENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFH 152
E ++ V T LL +YAK GCI+ A VF +M +N +WSAMIG Y++ + + +LF
Sbjct: 111 TEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFR 170
Query: 153 QMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGR 212
M+ + +P+ + +H +++ G+ S + V N+++ +Y +
Sbjct: 171 LMMKDGV--LPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAK 228
Query: 213 CGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITV 272
CGE+ + F +++ DV++WNS++ Y NG ++A+++ + M +G+SP +++ +
Sbjct: 229 CGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNIL 288
Query: 273 LCACSHAGLVEEGKILFESM 292
+ + G + L + M
Sbjct: 289 IGGYNQLGKCDAAMDLMQKM 308
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 167/371 (45%), Gaps = 50/371 (13%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G + ARKVFD RER ++ W+A A + R E+ +L+R M G+ D F
Sbjct: 124 MYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFL 183
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ +L+ C + ++ GK IH+ +++ G + V ++L VYAK G + +A F
Sbjct: 184 FPKILQGCA----NCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFF 239
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
R M ++ ++W++++ Y +N +A+EL +M E
Sbjct: 240 RRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKE----------------------- 276
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK----NPDVVSWNS 236
G+ + N LI Y + G+ + K++ DV +W +
Sbjct: 277 --------------GISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTA 322
Query: 237 LISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKY 296
+IS +NG +A+ +F M GV P+ ++ ++ + ACS ++ +G + S+ K
Sbjct: 323 MISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEV-HSIAVKM 381
Query: 297 RIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERA 356
+ +VD+ + +L++A K+ + + + T W S++ +C A +A
Sbjct: 382 GFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYT-WNSMITG---YCQAGYCGKA 437
Query: 357 SAMLFELEPWN 367
+ ++ N
Sbjct: 438 YELFTRMQDAN 448
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 275 bits (702), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 153/463 (33%), Positives = 252/463 (54%), Gaps = 28/463 (6%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + +L A +VFDE R R WNA A G+G E L L+ M S I D FT
Sbjct: 426 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 485
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ +LKAC L G EIH++I++ G N V +L+D+Y+K G I A +
Sbjct: 486 FGSILKACTGG-----SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIH 540
Query: 121 RAMPAKNSVS--------------------WSAMIGCYAKNDMPVKALELFHQMVLEACD 160
+ +VS W+++I Y + A LF +M+
Sbjct: 541 SRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGI- 599
Query: 161 SIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGE 220
P+ T +V +H ++++ L S + + + L+ MY +CG++
Sbjct: 600 -TPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSR 658
Query: 221 RVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAG 280
+F+K D V+WN++I Y ++G G++AIQ+FE MI + + P++++FI++L AC+H G
Sbjct: 659 LMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMG 718
Query: 281 LVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSL 340
L+++G F M Y + P + HY+ MVD+LG++ ++ A++LI +MPFE +W +L
Sbjct: 719 LIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTL 778
Query: 341 LGSCRIH-CNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVL 399
LG C IH N E+AE A+A L L+P ++ Y LL+++YA+A MW V +R+ M L
Sbjct: 779 LGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKL 838
Query: 400 QKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMK 442
+K PGCSW+E+K +++ F+ ++ +P+ E++ L + +EMK
Sbjct: 839 KKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 881
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 146/319 (45%), Gaps = 9/319 (2%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 70
A F+ R + WN+ G + +E++ M GI D T+ +LK C
Sbjct: 133 ANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSF 192
Query: 71 SEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVS 130
E G +IH ++R G + ++ + LLD+YAK + VF+ +P KNSVS
Sbjct: 193 LE----DTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVS 248
Query: 131 WSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGF 190
WSA+I +N++ AL+ F +M + ++ + SV +H
Sbjct: 249 WSAIIAGCVQNNLLSLALKFFKEM--QKVNAGVSQSIYASVLRSCAALSELRLGGQLHAH 306
Query: 191 ILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKA 250
L+ + V A + MY +C + + +FD +N + S+N++I+ Y +G KA
Sbjct: 307 ALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKA 366
Query: 251 IQIFENMIHQGVSPSYISFITVLCACSHA-GLVEEGKILFESMLSKYRIHPGMEHYACMV 309
+ +F ++ G+ IS V AC+ GL E +I ++ S + + + A +
Sbjct: 367 LLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAA--I 424
Query: 310 DLLGRANRLDEAIKLIEDM 328
D+ G+ L EA ++ ++M
Sbjct: 425 DMYGKCQALAEAFRVFDEM 443
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 128/269 (47%), Gaps = 6/269 (2%)
Query: 13 KVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSE 72
+VF E+ W+A L+ +++M + Y VL++C
Sbjct: 236 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA--- 292
Query: 73 FSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWS 132
++ L+ G ++HA+ L+ + + V T LD+YAK + A +F N S++
Sbjct: 293 -ALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYN 351
Query: 133 AMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFIL 192
AMI Y++ + KAL LFH+++ + +++ V ++G +
Sbjct: 352 AMITGYSQEEHGFKALLLFHRLMSSGLGF--DEISLSGVFRACALVKGLSEGLQIYGLAI 409
Query: 193 RRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQ 252
+ L + V NA I MYG+C ++ RVFD+++ D VSWN++I+ + NG G + +
Sbjct: 410 KSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLF 469
Query: 253 IFENMIHQGVSPSYISFITVLCACSHAGL 281
+F +M+ + P +F ++L AC+ L
Sbjct: 470 LFVSMLRSRIEPDEFTFGSILKACTGGSL 498
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 162/373 (43%), Gaps = 29/373 (7%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + ++ A+ +FD + +NA + G + L L+ ++ SG+ D +
Sbjct: 325 MYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEIS 384
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ V +AC + V L +G +I+ ++ ++ V +D+Y K ++ A VF
Sbjct: 385 LSGVFRACAL----VKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVF 440
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
M +++VSW+A+I + +N + L LF M+ + P+ T S+
Sbjct: 441 DEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIE--PDEFTFGSI-LKACTGGS 497
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERV----------------FD 224
+H I++ G+ S V +LI MY +CG I E++ +
Sbjct: 498 LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELE 557
Query: 225 KVKNPDV----VSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAG 280
K+ N + VSWNS+IS Y + A +F M+ G++P ++ TVL C++
Sbjct: 558 KMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLA 617
Query: 281 LVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSL 340
GK + ++ K + + + +VD+ + L ++ +L+ + W ++
Sbjct: 618 SAGLGKQIHAQVIKK-ELQSDVYICSTLVDMYSKCGDLHDS-RLMFEKSLRRDFVTWNAM 675
Query: 341 LGSCRIHCNAELA 353
+ H E A
Sbjct: 676 ICGYAHHGKGEEA 688
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 125/301 (41%), Gaps = 42/301 (13%)
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
+++V K C L+ GK+ HA+++ G+ V+ LL VY A+ V
Sbjct: 50 NFSFVFKECAKQG----ALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMV 105
Query: 120 FRAMPAKNSVSWSAMIGCYAK-----------NDMPV--------------------KAL 148
F MP ++ VSW+ MI Y+K N MPV K++
Sbjct: 106 FDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSI 165
Query: 149 ELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALIT 208
E+F M E + + T + +HG ++R G D+ + +AL+
Sbjct: 166 EVFVDMGREGIEF--DGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLD 223
Query: 209 MYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM--IHQGVSPSY 266
MY + RVF + + VSW+++I+ N A++ F+ M ++ GVS S
Sbjct: 224 MYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI 283
Query: 267 ISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIE 326
+ +VL +C+ + G L L G+ A + D+ + + + +A L +
Sbjct: 284 --YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATL-DMYAKCDNMQDAQILFD 340
Query: 327 D 327
+
Sbjct: 341 N 341
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 147/471 (31%), Positives = 246/471 (52%), Gaps = 33/471 (7%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
M+ G ++ ARKVFDE+ R + WN +G E+ + +Y+ M G+ D T
Sbjct: 200 MFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVT 259
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
++ +C + + L +GKE + + +G I ++ L+D+++K G I A +F
Sbjct: 260 MIGLVSSCSM----LGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIF 315
Query: 121 RAMPAKNSVSWSAMIGCYAK-----------NDMPVKALELFHQMV-------------- 155
+ + VSW+ MI YA+ +DM K + L++ M+
Sbjct: 316 DNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALA 375
Query: 156 ----LEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYG 211
++ ++ P+ +TM+ +H +I + L + + +L+ MY
Sbjct: 376 LFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYA 435
Query: 212 RCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFIT 271
+CG IS VF ++ + +++ ++I +G AI F MI G++P I+FI
Sbjct: 436 KCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIG 495
Query: 272 VLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFE 331
+L AC H G+++ G+ F M S++ ++P ++HY+ MVDLLGRA L+EA +L+E MP E
Sbjct: 496 LLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPME 555
Query: 332 PGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVR 391
VWG+LL CR+H N EL E+A+ L EL+P ++G YVLL +Y EA MW D K R
Sbjct: 556 ADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRAR 615
Query: 392 KLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMK 442
++M +R ++K+PGCS IEV + F+ ++ P+ EK+ L L M+
Sbjct: 616 RMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMR 666
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 154/380 (40%), Gaps = 42/380 (11%)
Query: 8 LDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGI---PSDRFTYTYV 64
LD + K+ I+ WN R + +E LY+QM G D FTY +
Sbjct: 103 LDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL 162
Query: 65 LKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP 124
K C S G I ++L+ E HV + ++A G + A VF P
Sbjct: 163 FKVCADLRLSSL----GHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESP 218
Query: 125 AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXX 184
++ VSW+ +I Y K KA+ ++ M E P+ VTM+ +
Sbjct: 219 VRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVK--PDDVTMIGLVSSCSMLGDLNRG 276
Query: 185 XXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNN 244
+ ++ GL +P++NAL+ M+ +CG+I R+FD ++ +VSW ++IS Y
Sbjct: 277 KEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARC 336
Query: 245 GY-------------------------------GKKAIQIFENMIHQGVSPSYISFITVL 273
G G+ A+ +F+ M P I+ I L
Sbjct: 337 GLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCL 396
Query: 274 CACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPG 333
ACS G ++ G I + KY + + +VD+ + + EA+ + +
Sbjct: 397 SACSQLGALDVG-IWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNS 455
Query: 334 PTVWGSLLGSCRIHCNAELA 353
T + +++G +H +A A
Sbjct: 456 LT-YTAIIGGLALHGDASTA 474
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 127/287 (44%), Gaps = 35/287 (12%)
Query: 113 ISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEAC-DSIPNSVTMVSV 171
+ Y+ + + + N SW+ I +++++ P ++ L+ QM+ C +S P+ T +
Sbjct: 103 LDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL 162
Query: 172 XXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDV 231
+ G +L+ L+ + V NA I M+ CG++ +VFD+ D+
Sbjct: 163 FKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDL 222
Query: 232 VSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFE- 290
VSWN LI+ Y G +KAI +++ M +GV P ++ I ++ +CS G + GK +E
Sbjct: 223 VSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEY 282
Query: 291 -----------------SMLSK-------YRIHPGMEH-----YACMVDLLGRANRLDEA 321
M SK RI +E + M+ R LD +
Sbjct: 283 VKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVS 342
Query: 322 IKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNA 368
KL +DM E +W +++G A+ + A A+ E++ N
Sbjct: 343 RKLFDDME-EKDVVLWNAMIGGS---VQAKRGQDALALFQEMQTSNT 385
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 271 bits (694), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 253/511 (49%), Gaps = 40/511 (7%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + ++ AR + + + WN+ G E L ++ +M+ + D FT
Sbjct: 271 MYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFT 330
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+L +S ++ H I++ GY V L+D+YAK G + A VF
Sbjct: 331 IPSILNCFALSR---TEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVF 387
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
M K+ +SW+A++ N +AL+LF M + P+ + SV
Sbjct: 388 EGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGI--TPDKIVTASVLSASAELTL 445
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
VHG ++ G S + V N+L+TMY +CG + +F+ ++ D+++W LI
Sbjct: 446 LEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVG 505
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
Y NG L+E+ + F+SM + Y I P
Sbjct: 506 YAKNG-----------------------------------LLEDAQRYFDSMRTVYGITP 530
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
G EHYACM+DL GR+ + +L+ M EP TVW ++L + R H N E ERA+ L
Sbjct: 531 GPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTL 590
Query: 361 FELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 420
ELEP NA YV L+++Y+ A + +VR+LM R + K PGCSW+E K K++SF+S
Sbjct: 591 MELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSE 650
Query: 421 EEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLI 480
+ +P++ ++ + + ++ +KE GY + +DLD+ KE L HSEKLAVAFGL+
Sbjct: 651 DRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLL 710
Query: 481 NTVKGETIRITKNLRLCEDCHAFTKFISKFA 511
G IRI KNLR+C DCH+ K + FA
Sbjct: 711 VVPSGAPIRIIKNLRVCGDCHSAMKLLVTFA 741
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 157/347 (45%), Gaps = 32/347 (9%)
Query: 8 LDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA 67
L A K+F + WNA G E L+ +M GI + +T VL+
Sbjct: 75 LSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRM 134
Query: 68 CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA-K 126
C S+ L +G++IH + ++ G++ +++V+ LL +YA+ IS A +F M K
Sbjct: 135 CT----SLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEK 190
Query: 127 NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXX 186
N+V+W++M+ Y++N KA+E F + E S N T SV
Sbjct: 191 NNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQS--NQYTFPSVLTACASVSACRVGVQ 248
Query: 187 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 246
VH I++ G + + V +ALI MY +C E+ + + ++ DVVSWNS+I G
Sbjct: 249 VHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGL 308
Query: 247 GKKAIQIFENM------IHQGVSPSYISFITV------LCACSHAGLVEEGKILFESMLS 294
+A+ +F M I PS ++ + + + +H +V+ G ++ + +
Sbjct: 309 IGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNN 368
Query: 295 KYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 341
+VD+ + +D A+K+ E M E W +L+
Sbjct: 369 ------------ALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALV 402
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 120/246 (48%), Gaps = 7/246 (2%)
Query: 101 TTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACD 160
T++ Y+ +S A +FR+ P KN++SW+A+I Y K+ V+A LF +M D
Sbjct: 63 NTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEM---QSD 119
Query: 161 SI-PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIG 219
I PN T+ SV +HG ++ G D + V+N L+ MY +C IS
Sbjct: 120 GIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEA 179
Query: 220 ERVFDKVKN-PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSH 278
E +F+ ++ + V+W S+++ Y NG+ KAI+ F ++ +G + +F +VL AC+
Sbjct: 180 EYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACAS 239
Query: 279 AGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWG 338
G + + K + + ++D+ + ++ A L+E M + W
Sbjct: 240 VSACRVG-VQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDD-VVSWN 297
Query: 339 SLLGSC 344
S++ C
Sbjct: 298 SMIVGC 303
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 271 bits (694), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 144/411 (35%), Positives = 231/411 (56%), Gaps = 7/411 (1%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY +LG+++ A+KVFDE R +W + + E+ L+ M +G+ D T
Sbjct: 153 MYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALT 212
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGY-EENIHVMTTLLDVYAKFGCISYANSV 119
++KAC +V+ + GK +H +R + +++ ++ +++D+Y K + A +
Sbjct: 213 LICLVKAC----GNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKL 268
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F +N V W+ +I +AK + V+A +LF QM+ E+ +PN T+ ++
Sbjct: 269 FETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESI--LPNQCTLAAILVSCSSLG 326
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
VHG+++R G++ + I MY RCG I + VFD + +V+SW+S+I+
Sbjct: 327 SLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMIN 386
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
+G NG ++A+ F M Q V P+ ++F+++L ACSH+G V+EG FESM Y +
Sbjct: 387 AFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVV 446
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAM 359
P EHYACMVDLLGRA + EA I++MP +P + WG+LL +CRIH +LA +
Sbjct: 447 PEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEK 506
Query: 360 LFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEV 410
L +EP + YVLL++IYA+A MW V VR+ MG + +K G S EV
Sbjct: 507 LLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 156/355 (43%), Gaps = 21/355 (5%)
Query: 2 YHELGSLDCARKVFDETR--ERTIYIWNAFFRALAMVGRG--EELLELYRQMNWSGIPSD 57
Y + LD A F+ +R + WN + ++L LY +M D
Sbjct: 49 YIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVD 108
Query: 58 RFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYAN 117
F + +KACV + L+ G IH +++G +++ +V +L+++YA+ G + A
Sbjct: 109 SFNLVFAIKACV----GLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQ 164
Query: 118 SVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXX 177
VF +P +NSV W ++ Y K + LF ++ +++T++ +
Sbjct: 165 KVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLF--CLMRDTGLALDALTLICLVKACGN 222
Query: 178 XXXXXXXXXVHGFILRRG-LDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNS 236
VHG +RR +D + ++I MY +C + ++F+ + +VV W +
Sbjct: 223 VFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTT 282
Query: 237 LISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKY 296
LIS + +A +F M+ + + P+ + +L +CS G + GK + Y
Sbjct: 283 LISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGK-----SVHGY 337
Query: 297 RIHPGME----HYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 347
I G+E ++ +D+ R + A + + MP E W S++ + I+
Sbjct: 338 MIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP-ERNVISWSSMINAFGIN 391
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 122/267 (45%), Gaps = 5/267 (1%)
Query: 78 LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA--KNSVSWSAMI 135
L +++HA ++ HG+E+ + + ++L + Y + + +A S F +P +N SW+ ++
Sbjct: 20 LNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTIL 79
Query: 136 GCYAKNDMPVKA-LELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 194
Y+K+ + + L + + CD + +S +V +HG ++
Sbjct: 80 SGYSKSKTCCYSDVLLLYNRMRRHCDGV-DSFNLVFAIKACVGLGLLENGILIHGLAMKN 138
Query: 195 GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIF 254
GLD V +L+ MY + G + ++VFD++ + V W L+ Y + ++F
Sbjct: 139 GLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLF 198
Query: 255 ENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGR 314
M G++ ++ I ++ AC + + GK + + + I A ++D+ +
Sbjct: 199 CLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVK 258
Query: 315 ANRLDEAIKLIEDMPFEPGPTVWGSLL 341
LD A KL E + +W +L+
Sbjct: 259 CRLLDNARKLFE-TSVDRNVVMWTTLI 284
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 271 bits (693), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 150/403 (37%), Positives = 238/403 (59%), Gaps = 15/403 (3%)
Query: 1 MYHELGSLDCARKVFDE--TRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDR 58
+Y G + A +VFD R+ + + WN+ A +G+ E+ + LY QM G+ DR
Sbjct: 136 LYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDR 195
Query: 59 FTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANS 118
FT+ VLKAC + +Q G+ IH ++++ G+ +++V+ L+ +YAK G I A +
Sbjct: 196 FTFPRVLKAC----GGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARN 251
Query: 119 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
VF +P K+ VSW++M+ Y + + +AL++F MV + P+ V + SV
Sbjct: 252 VFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIE--PDKVAISSVLARVLSF 309
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
+HG+++RRG++ + V NALI +Y + G++ +FD++ D VSWN++I
Sbjct: 310 KHGRQ---LHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAII 366
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 298
S + N G ++ FE M P I+F++VL C++ G+VE+G+ LF M +Y I
Sbjct: 367 SAHSKNSNG---LKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGI 423
Query: 299 HPGMEHYACMVDLLGRANRLDEAIKLI-EDMPFEPGPTVWGSLLGSCRIHCNAELAERAS 357
P MEHYACMV+L GRA ++EA +I ++M E GPTVWG+LL +C +H N ++ E A+
Sbjct: 424 DPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAA 483
Query: 358 AMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQ 400
LFELEP N N+ LL IY++AK DV+ VR++M R L+
Sbjct: 484 QRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 8/216 (3%)
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ +L+ C +S+ + G +H I + N+ + + L+ +YA G A+ VF
Sbjct: 95 FASLLETC----YSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVF 150
Query: 121 RAMPAKNS--VSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
M ++S +W+++I YA+ A+ L+ QM + P+ T V
Sbjct: 151 DRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVK--PDRFTFPRVLKACGGI 208
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
+H +++ G + V+NAL+ MY +CG+I VFD + + D VSWNS++
Sbjct: 209 GSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSML 268
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLC 274
+ Y ++G +A+ IF M+ G+ P ++ +VL
Sbjct: 269 TGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLA 304
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 150/443 (33%), Positives = 244/443 (55%), Gaps = 11/443 (2%)
Query: 13 KVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSE 72
+ F ++ + W A E LEL+R + + D +L+A V
Sbjct: 442 RAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSV-- 499
Query: 73 FSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWS 132
+ + KEIH +ILR G + + + L+DVY K + YA VF ++ K+ VSW+
Sbjct: 500 --LKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWT 556
Query: 133 AMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFIL 192
+MI A N +A+ELF +MV + +SV ++ + +H ++L
Sbjct: 557 SMISSSALNGNESEAVELFRRMVETGLSA--DSVALLCILSAAASLSALNKGREIHCYLL 614
Query: 193 RRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQ 252
R+G + A++ MY CG++ + VFD+++ ++ + S+I+ YG +G GK A++
Sbjct: 615 RKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVE 674
Query: 253 IFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLL 312
+F+ M H+ VSP +ISF+ +L ACSHAGL++EG+ + M +Y + P EHY C+VD+L
Sbjct: 675 LFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDML 734
Query: 313 GRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYV 372
GRAN + EA + ++ M EP VW +LL +CR H E+ E A+ L ELEP N GN V
Sbjct: 735 GRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLV 794
Query: 373 LLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQ----IE 428
L+++++AE W+DV+ VR M ++K PGCSWIE+ K++ F + ++ +P+ E
Sbjct: 795 LVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYE 854
Query: 429 KLRALLIKLSTEMKEQGYAPQTN 451
KL + KL E ++ A + N
Sbjct: 855 KLSEVTRKLEREKGKRELAREFN 877
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 141/277 (50%), Gaps = 8/277 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + GSLD A KVFDE +RT + WN A G L LY M G+P +
Sbjct: 125 MYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSS 184
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ +LKAC + ++ G E+H+ +++ GY ++ L+ +YAK +S A +F
Sbjct: 185 FPALLKACA----KLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240
Query: 121 RAMPAK-NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
K ++V W++++ Y+ + ++ LELF +M + PNS T+VS
Sbjct: 241 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTG--PAPNSYTIVSALTACDGFS 298
Query: 180 XXXXXXXVHGFILRRGLDSI-MPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
+H +L+ S + V NALI MY RCG++ ER+ ++ N DVV+WNSLI
Sbjct: 299 YAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLI 358
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCA 275
Y N K+A++ F +MI G +S +++ A
Sbjct: 359 KGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 143/305 (46%), Gaps = 15/305 (4%)
Query: 42 LLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMT 101
L E +++++ S S + YVL+ C + +G+++H+ I + + +
Sbjct: 64 LTEAFQRLDVSENNSPVEAFAYVLELCGKRR----AVSQGRQLHSRIFKTFPSFELDFLA 119
Query: 102 -TLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACD 160
L+ +Y K G + A VF MP + + +W+ MIG Y N P AL L+ M +E
Sbjct: 120 GKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEG-- 177
Query: 161 SIPNSV-TMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIG 219
+P + + ++ +H +++ G S ++NAL++MY + ++S
Sbjct: 178 -VPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAA 236
Query: 220 ERVFDKVKNP-DVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSH 278
R+FD + D V WNS++S Y +G + +++F M G +P+ + ++ L AC
Sbjct: 237 RRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDG 296
Query: 279 AGLVEEGKILFESMLSKYRIHPGMEHYAC--MVDLLGRANRLDEAIKLIEDMPFEPGPTV 336
+ GK + S+L K H E Y C ++ + R ++ +A +++ M
Sbjct: 297 FSYAKLGKEIHASVL-KSSTHSS-ELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVT 353
Query: 337 WGSLL 341
W SL+
Sbjct: 354 WNSLI 358
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Query: 206 LITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPS 265
L+ MYG+CG + E+VFD++ + +WN++I Y +NG A+ ++ NM +GV
Sbjct: 122 LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLG 181
Query: 266 YISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLI 325
SF +L AC+ + G L S+L K H +V + + + L A +L
Sbjct: 182 LSSFPALLKACAKLRDIRSGSEL-HSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240
Query: 326 EDMPFEPGPTVWGSLLGS 343
+ + +W S+L S
Sbjct: 241 DGFQEKGDAVLWNSILSS 258
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 152/412 (36%), Positives = 225/412 (54%), Gaps = 32/412 (7%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMN-WSGIPSDRFTYTYVLKACV 69
AR+VFDE E + W A A + EE L L+ M+ G+ D T+ VL AC
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTAC- 275
Query: 70 VSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSV 129
++ L++GKEIH ++ +G N+ V ++LLD+Y K G + A VF M KNSV
Sbjct: 276 ---GNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSV 332
Query: 130 SWSAMIGCYAKNDMPVKALELFHQM----------VLEACDSIPNSVTMVSVXXXXXXXX 179
SWSA++G Y +N KA+E+F +M VL+AC +
Sbjct: 333 SWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLA---------------- 376
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+HG +RRG + V +ALI +YG+ G I RV+ K+ ++++WN+++S
Sbjct: 377 AVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLS 436
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
NG G++A+ F +M+ +G+ P YISFI +L AC H G+V+EG+ F M Y I
Sbjct: 437 ALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIK 496
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNA-ELAERASA 358
PG EHY+CM+DLLGRA +EA L+E ++WG LLG C + +A +AER +
Sbjct: 497 PGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAK 556
Query: 359 MLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEV 410
+ ELEP +YVLL+++Y D ++RKLM +R + K G SWI+
Sbjct: 557 RMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWIDA 608
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 162/353 (45%), Gaps = 30/353 (8%)
Query: 1 MYHELG-SLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRF 59
+Y +LG + R+VFD + W + + LE++ +M G+ ++ F
Sbjct: 105 LYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEF 164
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
T + +KAC SE ++ G+ H ++ HG+E N + +TL +Y A V
Sbjct: 165 TLSSAVKAC--SELG--EVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRV 220
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F MP + + W+A++ ++KND+ +AL LF+ M +P+ T +V
Sbjct: 221 FDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAM-HRGKGLVPDGSTFGTVLTACGNLR 279
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+HG ++ G+ S + V ++L+ MYG+CG + +VF+ + + VSW++L+
Sbjct: 280 RLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLG 339
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
Y NG +KAI+IF M + + F TVL AC+ V GK IH
Sbjct: 340 GYCQNGEHEKAIEIFREMEEKDL----YCFGTVLKACAGLAAVRLGK----------EIH 385
Query: 300 PGMEHYAC---------MVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGS 343
C ++DL G++ +D A ++ M T W ++L +
Sbjct: 386 GQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMIT-WNAMLSA 437
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 13/334 (3%)
Query: 33 LAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHG 92
L +G+ E + + + S IP+ Y +L+ C V+ G + HA++++ G
Sbjct: 36 LCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCN----KVFSFIHGIQFHAHVVKSG 91
Query: 93 YEENIHVMTTLLDVYAKFG-CISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELF 151
E + +V +LL +Y K G + VF K+++SW++M+ Y VKALE+F
Sbjct: 92 LETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVF 151
Query: 152 HQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYG 211
+MV D+ N T+ S HG ++ G + + + L +YG
Sbjct: 152 VEMVSFGLDA--NEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYG 209
Query: 212 RCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIH-QGVSPSYISFI 270
E RVFD++ PDV+ W +++S + N ++A+ +F M +G+ P +F
Sbjct: 210 VNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFG 269
Query: 271 TVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPF 330
TVL AC + +++GK + +++ I + + ++D+ G+ + EA ++ M
Sbjct: 270 TVLTACGNLRRLKQGKEIHGKLITN-GIGSNVVVESSLLDMYGKCGSVREARQVFNGMS- 327
Query: 331 EPGPTVWGSLLGSCRIHCNAELAERASAMLFELE 364
+ W +LLG +C E+A + E+E
Sbjct: 328 KKNSVSWSALLGG---YCQNGEHEKAIEIFREME 358
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 91/171 (53%), Gaps = 10/171 (5%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + GS+ AR+VF+ ++ W+A G E+ +E++R+M D +
Sbjct: 309 MYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME----EKDLYC 364
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ VLKAC + ++ GKEIH +R G N+ V + L+D+Y K GCI A+ V+
Sbjct: 365 FGTVLKACA----GLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVY 420
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 171
M +N ++W+AM+ A+N +A+ F+ MV + P+ ++ +++
Sbjct: 421 SKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIK--PDYISFIAI 469
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 70/162 (43%), Gaps = 12/162 (7%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y + G +D A +V+ + R + WNA ALA GRGEE + + M GI D +
Sbjct: 406 LYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYIS 465
Query: 61 YTYVLKAC----VVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYA 116
+ +L AC +V E Y + K +G + + ++D+ + G A
Sbjct: 466 FIAILTACGHTGMVDEGRNYFVLMAKS-------YGIKPGTEHYSCMIDLLGRAGLFEEA 518
Query: 117 NSVFRAMPAKNSVS-WSAMIGCYAKNDMPVKALELFHQMVLE 157
++ +N S W ++G A N + E + ++E
Sbjct: 519 ENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMME 560
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 152/465 (32%), Positives = 243/465 (52%), Gaps = 41/465 (8%)
Query: 5 LGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYV 64
L S+D A VF +Y++ A GR + + LY +M + + D + T V
Sbjct: 74 LDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSV 133
Query: 65 LKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP 124
LKAC L+ +EIHA +L+ G+ + V ++++Y K G + A +F MP
Sbjct: 134 LKAC--------DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMP 185
Query: 125 AKNSVSWSAMIGCYA-------------------------------KNDMPVKALELFHQ 153
++ V+ + MI CY+ +N KALELF +
Sbjct: 186 DRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFRE 245
Query: 154 MVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRC 213
M +E + N T V V VH F+ + ++ V NALI MY RC
Sbjct: 246 MQMENVSA--NEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRC 303
Query: 214 GEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVL 273
G+I+ RVF +++ DV+S+N++IS +G +AI F +M+++G P+ ++ + +L
Sbjct: 304 GDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALL 363
Query: 274 CACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPG 333
ACSH GL++ G +F SM + + P +EHY C+VDLLGR RL+EA + IE++P EP
Sbjct: 364 NACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPD 423
Query: 334 PTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKL 393
+ G+LL +C+IH N EL E+ + LFE E ++G YVLL+++YA + W + +R+
Sbjct: 424 HIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRES 483
Query: 394 MGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLS 438
M ++K PGCS IEV +I+ F+ + +P E + L +L+
Sbjct: 484 MRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELN 528
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 146/331 (44%), Gaps = 49/331 (14%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y E G + A ++F + + + W A L + LEL+R+M + ++ FT
Sbjct: 199 YSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTA 258
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
VL AC + L+ G+ +H+ + E + V L+++Y++ G I+ A VFR
Sbjct: 259 VCVLSACS----DLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFR 314
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
M K+ +S++ MI A + V+A+ F MV PN VT+V++
Sbjct: 315 VMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFR--PNQVTLVALLNACS----- 367
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY 241
HG +L GL+ V N++ +RVF+ P + + ++ +
Sbjct: 368 ------HGGLLDIGLE----VFNSM-------------KRVFN--VEPQIEHYGCIVDLL 402
Query: 242 GNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEG----KILFESMLSKYR 297
G G ++A + EN+ + P +I T+L AC G +E G K LFES
Sbjct: 403 GRVGRLEEAYRFIENI---PIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESE----- 454
Query: 298 IHPGMEHYACMVDLLGRANRLDEAIKLIEDM 328
+P Y + +L + + E+ ++ E M
Sbjct: 455 -NPDSGTYVLLSNLYASSGKWKESTEIRESM 484
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 127/304 (41%), Gaps = 45/304 (14%)
Query: 56 SDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISY 115
S R T VL++C + P IHA I+R ++++ V+ L+ V + + Y
Sbjct: 27 SRRKTLISVLRSC--KNIAHVP-----SIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDY 79
Query: 116 ANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXX 175
A VF + N ++AMI + + + L+H+M+ + +P++ + SV
Sbjct: 80 AYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSV--LPDNYVITSV---- 133
Query: 176 XXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDK---------- 225
+H +L+ G S V ++ +YG+ GE+ +++FD+
Sbjct: 134 LKACDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAAT 193
Query: 226 ---------------------VKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSP 264
VK D V W ++I N KA+++F M + VS
Sbjct: 194 VMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSA 253
Query: 265 SYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKL 324
+ + + VL ACS G +E G+ + S + R+ ++++ R ++EA ++
Sbjct: 254 NEFTAVCVLSACSDLGALELGRWV-HSFVENQRMELSNFVGNALINMYSRCGDINEARRV 312
Query: 325 IEDM 328
M
Sbjct: 313 FRVM 316
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/451 (33%), Positives = 243/451 (53%), Gaps = 13/451 (2%)
Query: 2 YHELGSLDCARKVFDETRERTIYI-WNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
Y + S++ A+KVFDE +R + WNA + + R E+ L ++ +M G+ R T
Sbjct: 205 YSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHT 264
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
T VL A VS + G+ IH ++ G +I V L+D+Y K + ANS+F
Sbjct: 265 ITSVLSAFTVSG----DIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIF 320
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI-PNSVTMVSVXXXXXXXX 179
AM ++ +W++++ + L LF +M+ C I P+ VT+ +V
Sbjct: 321 EAMDERDLFTWNSVLCVHDYCGDHDGTLALFERML---CSGIRPDIVTLTTVLPTCGRLA 377
Query: 180 XXXXXXXVHGFILRRGL----DSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWN 235
+HG+++ GL S + N+L+ MY +CG++ VFD ++ D SWN
Sbjct: 378 SLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWN 437
Query: 236 SLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSK 295
+I+ YG G+ A+ +F M GV P I+F+ +L ACSH+G + EG+ M +
Sbjct: 438 IMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETV 497
Query: 296 YRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAER 355
Y I P +HYAC++D+LGRA++L+EA +L P P VW S+L SCR+H N +LA
Sbjct: 498 YNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALV 557
Query: 356 ASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIY 415
A L ELEP + G YVL++++Y EA + +V VR M ++ ++K PGCSWI +K ++
Sbjct: 558 AGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVH 617
Query: 416 SFVSSEEDNPQIEKLRALLIKLSTEMKEQGY 446
+F + + +P+ + + L + + M Y
Sbjct: 618 TFFTGNQTHPEFKSIHDWLSLVISHMHGHEY 648
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 139/287 (48%), Gaps = 9/287 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G + A VF + ER ++ +NA + G + +E YR+M +GI D++T
Sbjct: 105 MYAKCGLMRRAVLVFGGS-ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYT 163
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ +LK E S K++H + G++ + +V + L+ Y+KF + A VF
Sbjct: 164 FPSLLKGSDAMELS-----DVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVF 218
Query: 121 RAMPAK-NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
+P + +SV W+A++ Y++ AL +F +M E +++T SV
Sbjct: 219 DELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTIT--SVLSAFTVSG 276
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+HG ++ G S + V NALI MYG+ + +F+ + D+ +WNS++
Sbjct: 277 DIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLC 336
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGK 286
++ G + +FE M+ G+ P ++ TVL C + +G+
Sbjct: 337 VHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGR 383
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 81/175 (46%), Gaps = 10/175 (5%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + L+ A +F+ ER ++ WN+ G + L L+ +M SGI D T
Sbjct: 306 MYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVT 365
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGY----EENIHVMTTLLDVYAKFGCISYA 116
T VL C + L++G+EIH ++ G N + +L+D+Y K G + A
Sbjct: 366 LTTVLPTC----GRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDA 421
Query: 117 NSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 171
VF +M K+S SW+ MI Y AL++F M P+ +T V +
Sbjct: 422 RMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVK--PDEITFVGL 474
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 148/482 (30%), Positives = 254/482 (52%), Gaps = 35/482 (7%)
Query: 4 ELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIP-SDRFTYT 62
++ +D A ++F++ ++++N+ RA +++ +Y+Q+ DRFT+
Sbjct: 54 KIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFP 113
Query: 63 YVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRA 122
++ K+C S+ GK++H ++ + G ++ L+D+Y KF + A+ VF
Sbjct: 114 FMFKSCA----SLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDE 169
Query: 123 MPAKNSVSWSAMIGCYAKNDMPVKALELFHQMV--------------------LEACDSI 162
M ++ +SW++++ YA+ KA LFH M+ +EA D
Sbjct: 170 MYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFF 229
Query: 163 ---------PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRC 213
P+ ++++SV +H + RRG V NALI MY +C
Sbjct: 230 REMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKC 289
Query: 214 GEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVL 273
G IS ++F +++ DV+SW+++IS Y +G AI+ F M V P+ I+F+ +L
Sbjct: 290 GVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLL 349
Query: 274 CACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPG 333
ACSH G+ +EG F+ M Y+I P +EHY C++D+L RA +L+ A+++ + MP +P
Sbjct: 350 SACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPD 409
Query: 334 PTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKL 393
+WGSLL SCR N ++A A L ELEP + GNYVLLA+IYA+ W DV +RK+
Sbjct: 410 SKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKM 469
Query: 394 MGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIV 453
+ ++K PG S IEV + FVS + P ++ +++++L T ++Q N +
Sbjct: 470 IRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEI-SIVLQLFTSHQDQDVITNNNAL 528
Query: 454 HY 455
+
Sbjct: 529 AF 530
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 108/245 (44%), Gaps = 18/245 (7%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y LG + A+ +F ++TI W A +G E ++ +R+M +GI D +
Sbjct: 185 YARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISL 244
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
VL +C + L+ GK IH R G+ + V L+++Y+K G IS A +F
Sbjct: 245 ISVLPSCA----QLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFG 300
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
M K+ +SWS MI YA + A+E F++M + PN +T + +
Sbjct: 301 QMEGKDVISWSTMISGYAYHGNAHGAIETFNEM--QRAKVKPNGITFLGL--LSACSHVG 356
Query: 182 XXXXXVHGFILRRGLDSIMPVI---NALITMYGRCGEISIGERVFDKVKN----PDVVSW 234
+ F + R I P I LI + R G++ ER + K PD W
Sbjct: 357 MWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKL---ERAVEITKTMPMKPDSKIW 413
Query: 235 NSLIS 239
SL+S
Sbjct: 414 GSLLS 418
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 135/306 (44%), Gaps = 40/306 (13%)
Query: 82 KEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKN 141
K+I+A+I+ HG ++ ++T ++D K + YA +F + N ++++I Y N
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHN 86
Query: 142 DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMP 201
+ + ++ Q++ ++ + +P+ T + VHG + + G +
Sbjct: 87 SLYCDVIRIYKQLLRKSFE-LPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVV 145
Query: 202 VINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQ- 260
NALI MY + ++ +VFD++ DV+SWNSL+S Y G KKA +F M+ +
Sbjct: 146 TENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKT 205
Query: 261 ------------------------------GVSPSYISFITVLCACSHAGLVEEGK-ILF 289
G+ P IS I+VL +C+ G +E GK I
Sbjct: 206 IVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHL 265
Query: 290 ESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTV--WGSLLGSCRIH 347
+ + G+ + ++++ + + +AI+L M G V W +++ H
Sbjct: 266 YAERRGFLKQTGVCN--ALIEMYSKCGVISQAIQLFGQM---EGKDVISWSTMISGYAYH 320
Query: 348 CNAELA 353
NA A
Sbjct: 321 GNAHGA 326
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 156/448 (34%), Positives = 245/448 (54%), Gaps = 13/448 (2%)
Query: 2 YHELGSLDCARKVFD--ETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRF 59
Y + G LD A+ VF+ + +RT+ WN+ F+A ++ G + LY M D
Sbjct: 198 YGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLS 257
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
T+ + +C E L +G+ IH++ + G +++I + T + +Y+K A +
Sbjct: 258 TFINLAASCQNPE----TLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLL 313
Query: 120 FRAMPAKNSVSWSAMIGCYA-KNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
F M ++ VSW+ MI YA K DM +AL LFH M+ P+ VT++S+
Sbjct: 314 FDIMTSRTCVSWTVMISGYAEKGDMD-EALALFHAMIKSG--EKPDLVTLLSLISGCGKF 370
Query: 179 XXXXXXXXVHGFILRRGL--DSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNS 236
+ G D++M + NALI MY +CG I +FD VV+W +
Sbjct: 371 GSLETGKWIDARADIYGCKRDNVM-ICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTT 429
Query: 237 LISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKY 296
+I+ Y NG +A+++F MI P++I+F+ VL AC+H+G +E+G F M Y
Sbjct: 430 MIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVY 489
Query: 297 RIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERA 356
I PG++HY+CMVDLLGR +L+EA++LI +M +P +WG+LL +C+IH N ++AE+A
Sbjct: 490 NISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQA 549
Query: 357 SAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYS 416
+ LF LEP A YV +A+IYA A MW +R +M +R ++K PG S I+V K +S
Sbjct: 550 AESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHS 609
Query: 417 FVSSEEDNPQIEKLRALLIKLSTEMKEQ 444
F E + + E + L LS K++
Sbjct: 610 FTVGEHGHVENEVIYFTLNGLSLFAKDK 637
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 142/295 (48%), Gaps = 13/295 (4%)
Query: 12 RKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVS 71
R+++ + ++ WN R E L L+R+M G + FT+ +V KAC
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACA-- 63
Query: 72 EFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSW 131
+ + + +HA++++ + ++ V T +D++ K + YA VF MP +++ +W
Sbjct: 64 --RLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTW 121
Query: 132 SAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFI 191
+AM+ + ++ KA LF +M L + P+SVT++++ +H
Sbjct: 122 NAMLSGFCQSGHTDKAFSLFREMRLN--EITPDSVTVMTLIQSASFEKSLKLLEAMHAVG 179
Query: 192 LRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPD--VVSWNSLISMYGNNGYGKK 249
+R G+D + V N I+ YG+CG++ + VF+ + D VVSWNS+ Y G
Sbjct: 180 IRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFD 239
Query: 250 AIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 304
A ++ M+ + P +FI + +C + + +G+ ++ + IH G +
Sbjct: 240 AFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGR-----LIHSHAIHLGTDQ 289
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 147/354 (41%), Gaps = 29/354 (8%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
M+ + S+D A KVF+ ER WNA G ++ L+R+M + I D T
Sbjct: 96 MFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVT 155
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
++++ + L+ + +HA +R G + + V T + Y K G + A VF
Sbjct: 156 VMTLIQSASFEK----SLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVF 211
Query: 121 RAMP--AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
A+ + VSW++M Y+ A L+ M+ E + P+ T +++
Sbjct: 212 EAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLRE--EFKPDLSTFINLAASCQNP 269
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
+H + G D + IN I+MY + + +FD + + VSW +I
Sbjct: 270 ETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMI 329
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 298
S Y G +A+ +F MI G P ++ ++++ C G +E GK I
Sbjct: 330 SGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGK----------WI 379
Query: 299 HPGMEHYAC----------MVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLG 342
+ Y C ++D+ + + EA + ++ P E W +++
Sbjct: 380 DARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP-EKTVVTWTTMIA 432
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + GS+ AR +FD T E+T+ W A+ G E L+L+ +M + T
Sbjct: 402 MYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHIT 461
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGY--EENIHVMTTLLDVYAKFGCISYANS 118
+ VL+AC S L+KG E + +I++ Y + + ++D+ + G + A
Sbjct: 462 FLAVLQACAHSG----SLEKGWE-YFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALE 516
Query: 119 VFRAMPAKNSVS-WSAMI 135
+ R M AK W A++
Sbjct: 517 LIRNMSAKPDAGIWGALL 534
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/444 (31%), Positives = 238/444 (53%), Gaps = 9/444 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y + G +D A +F + +R + W A G+ + +E YR+M G DR
Sbjct: 160 LYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVV 219
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+L+A + + G+ +H + R G N+ V T+L+D+YAK G I A+ VF
Sbjct: 220 MLGLLQA----SGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVF 275
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
M K +VSW ++I +A+N + KA E +M ++ P+ VT+V V
Sbjct: 276 SRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEM--QSLGFQPDLVTLVGVLVACSQVGS 333
Query: 181 XXXXXXVHGFILRRG-LDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
VH +IL+R LD + AL+ MY +CG +S +F+ V D+V WN++IS
Sbjct: 334 LKTGRLVHCYILKRHVLDRVTA--TALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMIS 391
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
YG +G G++ + +F M + P + +F ++L A SH+GLVE+G+ F M++KY+I
Sbjct: 392 CYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQ 451
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAM 359
P +HY C++DLL RA R++EA+ +I + +W +LL C H N + + A+
Sbjct: 452 PSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANK 511
Query: 360 LFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVS 419
+ +L P + G L+++ +A A W +V VRKLM ++KVPG S IEV ++ +F+
Sbjct: 512 ILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLM 571
Query: 420 SEEDNPQIEKLRALLIKLSTEMKE 443
+ + + + +L L TE+++
Sbjct: 572 EDLSHHEHYHMLQVLRNLKTEIRD 595
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 167/347 (48%), Gaps = 9/347 (2%)
Query: 5 LGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYV 64
+G + ARKVFDE +R + ++N+ + +E+L LY QM I D T+T
Sbjct: 63 IGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMT 122
Query: 65 LKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP 124
+KAC+ S L+KG+ + + GY+ ++ V +++L++Y K G + A +F M
Sbjct: 123 IKACL----SGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMA 178
Query: 125 AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXX 184
++ + W+ M+ +A+ +KA+E + +M E + V M+ +
Sbjct: 179 KRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGR--DRVVMLGLLQASGDLGDTKMG 236
Query: 185 XXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNN 244
VHG++ R GL + V +L+ MY + G I + RVF ++ VSW SLIS + N
Sbjct: 237 RSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQN 296
Query: 245 GYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 304
G KA + M G P ++ + VL ACS G ++ G+++ +L ++ +
Sbjct: 297 GLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTA- 355
Query: 305 YACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAE 351
++D+ + L + ++ E + W +++ IH N +
Sbjct: 356 -TALMDMYSKCGALSSSREIFEHVG-RKDLVCWNTMISCYGIHGNGQ 400
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 187 VHGFILRRG-LDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNG 245
+H F++ G L + + LI GR GEIS +VFD++ V +NS+I +Y
Sbjct: 36 IHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGK 95
Query: 246 YGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGK 286
+ +++++ MI + + P +F + AC ++E+G+
Sbjct: 96 NPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGE 136
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 146/489 (29%), Positives = 252/489 (51%), Gaps = 39/489 (7%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM-NWSGIPSDRFT 60
Y + +++ ARKVFDE ER + WN+ + G E+ ++Y+ M S + T
Sbjct: 177 YTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVT 236
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
V +AC S ++ G E+H ++ + + ++ + ++ YAK G + YA ++F
Sbjct: 237 VISVFQACGQSSDLIF----GLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALF 292
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELF-----------------------HQMVLE 157
M K+SV++ A+I Y + + +A+ LF H+ V+
Sbjct: 293 DEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVIN 352
Query: 158 A------CDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYG 211
+ C S PN+VT+ S+ +H F +R G D+ + V ++I Y
Sbjct: 353 SFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYA 412
Query: 212 RCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFIT 271
+ G + +RVFD K+ +++W ++I+ Y +G A +F+ M G P ++
Sbjct: 413 KLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTA 472
Query: 272 VLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFE 331
VL A +H+G + + +F+SML+KY I PG+EHYACMV +L RA +L +A++ I MP +
Sbjct: 473 VLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPID 532
Query: 332 PGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVR 391
P VWG+LL + + E+A A LFE+EP N GNY ++A++Y +A W + + VR
Sbjct: 533 PIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVR 592
Query: 392 KLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKEQGYAPQTN 451
M + L+K+PG SWIE +K + SF++ + + +++ ++ L M ++ Y
Sbjct: 593 NKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMSDKEY----- 647
Query: 452 IVHYDLDEG 460
I +LDE
Sbjct: 648 IRKQELDEA 656
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 138/301 (45%), Gaps = 22/301 (7%)
Query: 83 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKND 142
++HA I+ + + + + L+ Y + A VF + +N+ S++A++ Y +
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 143 MPVKALELFHQMVLEACDSI----PNSVTMVSVXXXXXXXXXX---XXXXXVHGFILRRG 195
M A LF + +C S P+S+++ V VHGF++R G
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGG 162
Query: 196 LDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFE 255
DS + V N +IT Y +C I +VFD++ DVVSWNS+IS Y +G + ++++
Sbjct: 163 FDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYK 222
Query: 256 NMIH-QGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC--MVDLL 312
M+ P+ ++ I+V AC + + G + + M+ H M+ C ++
Sbjct: 223 AMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIEN---HIQMDLSLCNAVIGFY 279
Query: 313 GRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEP-----WN 367
+ LD A L ++M E +G+++ H L + A A+ E+E WN
Sbjct: 280 AKCGSLDYARALFDEMS-EKDSVTYGAIISGYMAH---GLVKEAMALFSEMESIGLSTWN 335
Query: 368 A 368
A
Sbjct: 336 A 336
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 118/260 (45%), Gaps = 10/260 (3%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSG---IPSDRFTYTYVLKA 67
A VFDE R + +NA A + L+ ++W G SD + +
Sbjct: 76 ALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLF--LSWIGSSCYSSDAARPDSISIS 133
Query: 68 CVVSEFS----VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAM 123
CV+ S + +++H ++R G++ ++ V ++ Y K I A VF M
Sbjct: 134 CVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEM 193
Query: 124 PAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXX 183
++ VSW++MI Y+++ +++ M L D PN VT++SV
Sbjct: 194 SERDVVSWNSMISGYSQSGSFEDCKKMYKAM-LACSDFKPNGVTVISVFQACGQSSDLIF 252
Query: 184 XXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGN 243
VH ++ + + + NA+I Y +CG + +FD++ D V++ ++IS Y
Sbjct: 253 GLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMA 312
Query: 244 NGYGKKAIQIFENMIHQGVS 263
+G K+A+ +F M G+S
Sbjct: 313 HGLVKEAMALFSEMESIGLS 332
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 258 bits (659), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 149/448 (33%), Positives = 240/448 (53%), Gaps = 10/448 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G + ARKVF E ++ NA + EE + L+++M G+ T
Sbjct: 573 MYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEIT 631
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYE-ENIHVMTTLLDVYAKFGCISYANSV 119
+ +++AC E L G + H I + G+ E ++ +LL +Y ++ A ++
Sbjct: 632 FATIVEACHKPE----SLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACAL 687
Query: 120 FRAMPAKNS-VSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
F + + S V W+ M+ +++N +AL+ + +M + +P+ T V+V
Sbjct: 688 FSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGV--LPDQATFVTVLRVCSVL 745
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN-PDVVSWNSL 237
+H I D N LI MY +CG++ +VFD+++ +VVSWNSL
Sbjct: 746 SSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSL 805
Query: 238 ISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYR 297
I+ Y NGY + A++IF++M + P I+F+ VL ACSHAG V +G+ +FE M+ +Y
Sbjct: 806 INGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYG 865
Query: 298 IHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERAS 357
I ++H ACMVDLLGR L EA IE +P +W SLLG+CRIH + E ++
Sbjct: 866 IEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISA 925
Query: 358 AMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSF 417
L ELEP N+ YVLL++IYA W ++RK+M R ++KVPG SWI+V+++ + F
Sbjct: 926 EKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIF 985
Query: 418 VSSEEDNPQIEKLRALLIKLSTEMKEQG 445
+ ++ + +I K+ L L MK+
Sbjct: 986 AAGDKSHSEIGKIEMFLEDLYDLMKDDA 1013
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 157/318 (49%), Gaps = 23/318 (7%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + ++ A KVF+ E+ WNA R A G +++EL+ M SG D FT
Sbjct: 371 MYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFT 430
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+T +L C S + L+ G + H+ I++ +N+ V L+D+YAK G + A +F
Sbjct: 431 FTSLLSTCAAS----HDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIF 486
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
M +++V+W+ +IG Y +++ +A +LF +M L C + + + S
Sbjct: 487 ERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNL--CGIVSDGACLASTLKACTHVHG 544
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
VH ++ GLD + ++LI MY +CG I +VF + VVS N+LI+
Sbjct: 545 LYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAG 604
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCAC----------------SHAGLVEE 284
Y N ++A+ +F+ M+ +GV+PS I+F T++ AC + G E
Sbjct: 605 YSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSE 663
Query: 285 GKILFESMLSKYRIHPGM 302
G+ L S+L Y GM
Sbjct: 664 GEYLGISLLGMYMNSRGM 681
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 148/328 (45%), Gaps = 7/328 (2%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y LG L AR +F E + WN G +E + M S + S R T
Sbjct: 271 YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTL 330
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
VL A + V L G +HA ++ G NI+V ++L+ +Y+K + A VF
Sbjct: 331 GSVLSAIGI----VANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE 386
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
A+ KN V W+AMI YA N K +ELF M +++ + T S+
Sbjct: 387 ALEEKNDVFWNAMIRGYAHNGESHKVMELF--MDMKSSGYNIDDFTFTSLLSTCAASHDL 444
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY 241
H I+++ L + V NAL+ MY +CG + ++F+++ + D V+WN++I Y
Sbjct: 445 EMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSY 504
Query: 242 GNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPG 301
+ +A +F+ M G+ + L AC+H + +GK + + K +
Sbjct: 505 VQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV-HCLSVKCGLDRD 563
Query: 302 MEHYACMVDLLGRANRLDEAIKLIEDMP 329
+ + ++D+ + + +A K+ +P
Sbjct: 564 LHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 150/344 (43%), Gaps = 25/344 (7%)
Query: 27 NAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACV--------------VSE 72
+A F + + V R +L R++ +PS + +L+ C+ + +
Sbjct: 11 SAMFDSFSFVRRLSYSPDLGRRIYGHVLPSHDQIHQRLLEICLGQCKLFKSRKVFDEMPQ 70
Query: 73 FSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWS 132
L+ GK +H+ L G + + ++D+YAK +SYA F + K+ +W+
Sbjct: 71 RLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWN 129
Query: 133 AMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFIL 192
+M+ Y+ P K L F + L PN T V +H ++
Sbjct: 130 SMLSMYSSIGKPGKVLRSF--VSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMI 187
Query: 193 RRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQ 252
+ GL+ AL+ MY +C IS RVF+ + +P+ V W L S Y G ++A+
Sbjct: 188 KMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVL 247
Query: 253 IFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLL 312
+FE M +G P +++F+TV+ G +++ ++LF M S P + + M+
Sbjct: 248 VFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGH 302
Query: 313 GRANRLDEAIKLIEDM---PFEPGPTVWGSLLGSCRIHCNAELA 353
G+ AI+ +M + + GS+L + I N +L
Sbjct: 303 GKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 150/341 (43%), Gaps = 44/341 (12%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y + + A K FD E+ + WN+ + +G+ ++L + + + I ++FT
Sbjct: 104 LYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFT 162
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
++ VL C ++ G++IH ++++ G E N + L+D+YAK IS A VF
Sbjct: 163 FSIVLSTCARET----NVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVF 218
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+ N+V W+ + Y K +P +A+ +F +M E P+ + V+V
Sbjct: 219 EWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG--HRPDHLAFVTV--------- 267
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
I Y R G++ +F ++ +PDVV+WN +IS
Sbjct: 268 --------------------------INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISG 301
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
+G G AI+ F NM V + + +VL A ++ G ++ + K +
Sbjct: 302 HGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAI-KLGLAS 360
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 341
+ + +V + + +++ A K+ E + E W +++
Sbjct: 361 NIYVGSSLVSMYSKCEKMEAAAKVFEALE-EKNDVFWNAMI 400
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 143/343 (41%), Gaps = 43/343 (12%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + + AR+VF+ + W F G EE + ++ +M G D
Sbjct: 204 MYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLA 263
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ T+++ Y + G + A +F
Sbjct: 264 FV---------------------------------------TVINTYIRLGKLKDARLLF 284
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
M + + V+W+ MI + K A+E F M + S + T+ SV
Sbjct: 285 GEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRS--TLGSVLSAIGIVAN 342
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
VH ++ GL S + V ++L++MY +C ++ +VF+ ++ + V WN++I
Sbjct: 343 LDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRG 402
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
Y +NG K +++F +M G + +F ++L C+ + +E G F S++ K ++
Sbjct: 403 YAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGS-QFHSIIIKKKLAK 461
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGS 343
+ +VD+ + L++A ++ E M T W +++GS
Sbjct: 462 NLFVGNALVDMYAKCGALEDARQIFERMCDRDNVT-WNTIIGS 503
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 150/466 (32%), Positives = 245/466 (52%), Gaps = 40/466 (8%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 70
ARK+FD + +++N +A + + E + LY +++ G+ T+ ++ A
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAA-SA 93
Query: 71 SEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR--------- 121
S S PL + +H+ R G+E + TTL+ YAK G + A VF
Sbjct: 94 SFSSARPL---RLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPV 150
Query: 122 ----------------------AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEAC 159
+MP KN SW+ +I +++N +AL++F + +E
Sbjct: 151 WNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMF--LCMEKD 208
Query: 160 DSI-PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISI 218
S+ PN +T+VSV + G+ G + V NA I MY +CG I +
Sbjct: 209 KSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDV 268
Query: 219 GERVFDKVKNP-DVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACS 277
+R+F+++ N ++ SWNS+I +G +A+ +F M+ +G P ++F+ +L AC
Sbjct: 269 AKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACV 328
Query: 278 HAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVW 337
H G+V +G+ LF+SM ++I P +EHY CM+DLLGR +L EA LI+ MP +P VW
Sbjct: 329 HGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVW 388
Query: 338 GSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKR 397
G+LLG+C H N E+AE AS LF+LEP N GN V++++IYA + W V +RKLM K
Sbjct: 389 GTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKE 448
Query: 398 VLQKVPGCSW-IEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMK 442
+ K G S+ +EV ++ F ++ +P+ ++ +L ++ MK
Sbjct: 449 TMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMK 494
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 142/334 (42%), Gaps = 74/334 (22%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM------NWSGIP 55
Y +LG+L CAR+VFDE +R + +WNA G + +EL+ M +W+ +
Sbjct: 127 YAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVI 186
Query: 56 ---SDRFTYTYVLKA--CVVSEFSVYP-----------------LQKGKEIHANILRHGY 93
S Y+ LK C+ + SV P L+ G+ + +G+
Sbjct: 187 SGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGF 246
Query: 94 EENIHVMTTLLDVYAKFGCISYANSVFRAM-PAKNSVSWSAMIGCYAKNDMPVKALELFH 152
+NI+V +++Y+K G I A +F + +N SW++MIG A + +AL LF
Sbjct: 247 FDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFA 306
Query: 153 QMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGR 212
QM+ E P++VT V + VHG
Sbjct: 307 QMLREG--EKPDAVTFVGL-----------LLACVHG----------------------- 330
Query: 213 CGEISIGERVFDKVK-----NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYI 267
G + G+ +F ++ +P + + +I + G G ++A + + M + P +
Sbjct: 331 -GMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTM---PMKPDAV 386
Query: 268 SFITVLCACSHAGLVEEGKILFESMLSKYRIHPG 301
+ T+L ACS G VE +I E++ +PG
Sbjct: 387 VWGTLLGACSFHGNVEIAEIASEALFKLEPTNPG 420
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 7/139 (5%)
Query: 1 MYHELGSLDCARKVFDET-RERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRF 59
MY + G +D A+++F+E +R + WN+ +LA G+ +E L L+ QM G D
Sbjct: 259 MYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAV 318
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILR-HGYEENIHVMTTLLDVYAKFGCISYANS 118
T+ +L ACV V KG+E+ ++ H + ++D+ + G + A
Sbjct: 319 TFVGLLLACVHGGMVV----KGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYD 374
Query: 119 VFRAMPAK-NSVSWSAMIG 136
+ + MP K ++V W ++G
Sbjct: 375 LIKTMPMKPDAVVWGTLLG 393
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 152/470 (32%), Positives = 240/470 (51%), Gaps = 41/470 (8%)
Query: 26 WNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIH 85
W + + G+ E++L+ + M SG C E L +++H
Sbjct: 262 WTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELE----ALSIAEKVH 317
Query: 86 ANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPV 145
+++ G+EE + L+ VY K G + A +FR + K SW+++I +
Sbjct: 318 GYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLD 377
Query: 146 KALELFHQM------------------VLEACDS-------------------IPNSVTM 168
+AL LF ++ V++ C+ + NSVT+
Sbjct: 378 EALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTI 437
Query: 169 VSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN 228
+ +HG ++R + + V NAL+ MY +CG +S G VF+ +++
Sbjct: 438 CCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRD 497
Query: 229 PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKIL 288
D++SWNS+I YG +G+ +KA+ +F+ MI G P I+ + VL ACSHAGLVE+G+ +
Sbjct: 498 KDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREI 557
Query: 289 FESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHC 348
F SM ++ + P EHYAC+VDLLGR L EA +++++MP EP V G+LL SCR+H
Sbjct: 558 FYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHK 617
Query: 349 NAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWI 408
N ++AE ++ L LEP G+Y+LL++IY+ W + +VR L K+ L+KV G SWI
Sbjct: 618 NVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWI 677
Query: 409 EVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKEQGYAPQTNIVHYDLD 458
EVKKK Y F S + E + +L L + M ++G N DLD
Sbjct: 678 EVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKGPTHDGNNYEDDLD 727
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 151/335 (45%), Gaps = 50/335 (14%)
Query: 1 MYHELGSLDCARKVFDETRE---RTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSD 57
+Y LG L AR VF+ + +WN+ +A G E LELYR M G+ D
Sbjct: 98 VYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGD 157
Query: 58 RFTYTYVLKAC-VVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYA 116
+ +L+AC + F + + H +++ G +EN+HV+ LL +Y K G + A
Sbjct: 158 GYILPLILRACRYLGRFGLC-----RAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDA 212
Query: 117 NSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXX 176
++F MP +N +SW+ MI +++ A+++F M E + P+ VT SV
Sbjct: 213 YNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQRE--EFKPDEVTWTSVLSCHS 270
Query: 177 X-----------------------------------XXXXXXXXXVHGFILRRGLDSIMP 201
VHG++++ G + +P
Sbjct: 271 QCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLP 330
Query: 202 VINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIF---ENMI 258
NALI +YG+ G++ E +F +++N + SWNSLI+ + + G +A+ +F E M
Sbjct: 331 SRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMN 390
Query: 259 HQ-GVSPSYISFITVLCACSHAGLVEEGKILFESM 292
H V + +++ +V+ C+ G ++ F M
Sbjct: 391 HVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQM 425
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 90/176 (51%), Gaps = 14/176 (7%)
Query: 4 ELGSLDCARKVFDETRE--------RTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIP 55
+ G LD A +F E E + W + + + GRG++ LE +RQM +S +
Sbjct: 372 DAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVL 431
Query: 56 SDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISY 115
++ T +L C + L G+EIH +++R ENI V L+++YAK G +S
Sbjct: 432 ANSVTICCILSICA----ELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSE 487
Query: 116 ANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 171
+ VF A+ K+ +SW+++I Y + KAL +F +M+ P+ + +V+V
Sbjct: 488 GSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFH--PDGIALVAV 541
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 92/210 (43%), Gaps = 6/210 (2%)
Query: 79 QKGKEIHANILRHGY-EENIHVMTTLLDVYAKFGCISYANSVFRAMP---AKNSVSWSAM 134
Q+ +++HA +L + + + L+ VYA+ G + A +VF + + W+++
Sbjct: 70 QQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSI 129
Query: 135 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 194
+ + + ALEL+ M + + + H +++
Sbjct: 130 LKANVSHGLYENALELYRGMRQRGLTG--DGYILPLILRACRYLGRFGLCRAFHTQVIQI 187
Query: 195 GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIF 254
GL + V+N L+T+Y + G + +F ++ + +SWN +I + + A++IF
Sbjct: 188 GLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIF 247
Query: 255 ENMIHQGVSPSYISFITVLCACSHAGLVEE 284
E M + P +++ +VL S G E+
Sbjct: 248 EWMQREEFKPDEVTWTSVLSCHSQCGKFED 277
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 5/130 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G L VF+ R++ + WN+ + M G E+ L ++ +M SG D
Sbjct: 478 MYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIA 537
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANIL-RHGYEENIHVMTTLLDVYAKFGCISYANSV 119
VL AC + ++KG+EI ++ R G E ++D+ + G + A+ +
Sbjct: 538 LVAVLSACSHAGL----VEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEI 593
Query: 120 FRAMPAKNSV 129
+ MP + V
Sbjct: 594 VKNMPMEPKV 603
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 157/451 (34%), Positives = 225/451 (49%), Gaps = 24/451 (5%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G + CAR FDE R+ W A G + +L+ QM D
Sbjct: 122 MYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHV---KDVVI 178
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIH----VMTTLLDVYAKFGCISYA 116
Y ++ V S G A R ++E H TT++ Y I A
Sbjct: 179 YNAMMDGFVKS---------GDMTSA---RRLFDEMTHKTVITWTTMIHGYCNIKDIDAA 226
Query: 117 NSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI-PNSVTMVSVXXXX 175
+F AMP +N VSW+ MIG Y +N P + + LF +M +A S+ P+ VT++SV
Sbjct: 227 RKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEM--QATTSLDPDDVTILSVLPAI 284
Query: 176 XXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWN 235
H F+ R+ LD + V A++ MY +CGEI +R+FD++ V SWN
Sbjct: 285 SDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWN 344
Query: 236 SLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSK 295
++I Y NG + A+ +F M+ + P I+ + V+ AC+H GLVEEG+ F M +
Sbjct: 345 AMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVM-RE 402
Query: 296 YRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAER 355
++ +EHY CMVDLLGRA L EA LI +MPFEP + S L +C + + E AER
Sbjct: 403 MGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAER 462
Query: 356 ASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIY 415
ELEP N GNYVLL ++YA K W D V+ +M K +K GCS IE+ +
Sbjct: 463 ILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVS 522
Query: 416 SFVSSEEDNPQIEKLRALLIKLSTEMKEQGY 446
F+S + +P + +L L M E+ Y
Sbjct: 523 EFISGDTTHPHRRSIHLVLGDLLMHMNEEKY 553
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 177/370 (47%), Gaps = 41/370 (11%)
Query: 11 ARKVFDETRERT-IYIWNAFFRALAMVGRGEELLELYRQM-NWSGIPSDRFTYTYVLKAC 68
ARK+FD+ +R ++ N+ +A + + LYR + + D FT+T + K+C
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSC 88
Query: 69 VVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNS 128
+S VY +G ++H+ I R G+ +++V T ++D+YAKFG + A + F MP ++
Sbjct: 89 SLS-MCVY---QGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSE 144
Query: 129 VSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVH 188
VSW+A+I Y + A +LF QM P+ +V +
Sbjct: 145 VSWTALISGYIRCGELDLASKLFDQM--------PHVKDVV------------IYNAMMD 184
Query: 189 GFI-------LRRGLDSIM--PVINALITMYGRCG--EISIGERVFDKVKNPDVVSWNSL 237
GF+ RR D + VI ++G C +I ++FD + ++VSWN++
Sbjct: 185 GFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTM 244
Query: 238 ISMYGNNGYGKKAIQIFENM-IHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKY 296
I Y N ++ I++F+ M + P ++ ++VL A S G + G+ + +
Sbjct: 245 IGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWC-HCFVQRK 303
Query: 297 RIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA-ER 355
++ ++ ++D+ + +++A ++ ++MP E W +++ ++ NA A +
Sbjct: 304 KLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMP-EKQVASWNAMIHGYALNGNARAALDL 362
Query: 356 ASAMLFELEP 365
M+ E +P
Sbjct: 363 FVTMMIEEKP 372
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 138/347 (39%), Gaps = 32/347 (9%)
Query: 88 ILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKN-SVSWSAMIGCYAKNDMPVK 146
+LRH E N+ + T L + A I YA +F P ++ S ++MI Y +
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPD 60
Query: 147 ALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINAL 206
+ L+ + E C + P++ T ++ +H I R G + M V +
Sbjct: 61 SFALYRDLRKETCFA-PDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGV 119
Query: 207 ITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSY 266
+ MY + G++ FD++ + VSW +LIS Y G A ++F+ M H
Sbjct: 120 VDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPH---VKDV 176
Query: 267 ISFITVLCACSHAGLVEEGKILFESMLSKYRIH-PGMEHYACMVDLLGRANRLDEAIKLI 325
+ + ++ +G + + LF+ M K I M H C + +D A KL
Sbjct: 177 VIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNI------KDIDAARKLF 230
Query: 326 EDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFE------LEPWNAGNYVLLADIYA 379
+ MP E W +++G +C + + + E L+P + +L I
Sbjct: 231 DAMP-ERNLVSWNTMIGG---YCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISD 286
Query: 380 EAKM----WSDVKSVRKLMGKRV------LQKVPGCSWIEVKKKIYS 416
+ W RK + K+V L C IE K+I+
Sbjct: 287 TGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFD 333
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/445 (30%), Positives = 238/445 (53%), Gaps = 10/445 (2%)
Query: 2 YHELGSLDCARKVFDETR-ERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
Y + GS+ A++VFD + + WN+ + E EL+ QM + +D +T
Sbjct: 248 YADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYT 307
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKF--GCISYANS 118
YT +L AC E ++ GK +H +++ G E+ L+ +Y +F G + A S
Sbjct: 308 YTGLLSACSGEEHQIF----GKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALS 363
Query: 119 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
+F ++ +K+ +SW+++I +A+ + A++ F L + + + ++
Sbjct: 364 LFESLKSKDLISWNSIITGFAQKGLSEDAVKFFS--YLRSSEIKVDDYAFSALLRSCSDL 421
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNP-DVVSWNSL 237
+H + G S VI++LI MY +CG I + F ++ + V+WN++
Sbjct: 422 ATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAM 481
Query: 238 ISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYR 297
I Y +G G+ ++ +F M +Q V +++F +L ACSH GL++EG L M Y+
Sbjct: 482 ILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYK 541
Query: 298 IHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERAS 357
I P MEHYA VDLLGRA +++A +LIE MP P P V + LG CR E+A + +
Sbjct: 542 IQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVA 601
Query: 358 AMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSF 417
L E+EP + YV L+ +Y++ K W + SV+K+M +R ++KVPG SWIE++ ++ +F
Sbjct: 602 NHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAF 661
Query: 418 VSSEEDNPQIEKLRALLIKLSTEMK 442
+ + NP + + ++ L+ EM+
Sbjct: 662 NAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 148/312 (47%), Gaps = 11/312 (3%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y + G L A +FDE +R WN G+ E+ L+ M SG D +++
Sbjct: 45 YIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSF 104
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
+ +LK SV G+++H +++ GYE N++V ++L+D+YAK + A F+
Sbjct: 105 SRLLKGIA----SVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFK 160
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
+ NSVSW+A+I + + A L M ++A ++ ++ T +
Sbjct: 161 EISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM-DAGTFAPLLTLLDDPMFC 219
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKV-KNPDVVSWNSLISM 240
VH +L+ GL + + NA+I+ Y CG +S +RVFD + + D++SWNS+I+
Sbjct: 220 NLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAG 279
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
+ + + A ++F M V ++ +L ACS EE +I F L I
Sbjct: 280 FSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSG----EEHQI-FGKSLHGMVIKK 334
Query: 301 GMEHYACMVDLL 312
G+E + L
Sbjct: 335 GLEQVTSATNAL 346
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
Query: 78 LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGC 137
QK H ++ G +I+V +LD Y KFG + YAN +F MP ++SVSW+ MI
Sbjct: 16 FQKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISG 75
Query: 138 YAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD 197
Y A LF M D + + + VHG +++ G +
Sbjct: 76 YTSCGKLEDAWCLFTCMKRSGSD--VDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYE 133
Query: 198 SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY 241
+ V ++L+ MY +C + F ++ P+ VSWN+LI+ +
Sbjct: 134 CNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGF 177
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 149/480 (31%), Positives = 240/480 (50%), Gaps = 35/480 (7%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY ++ AR++FD ER WNA A G E EL+ +M +SG+ T
Sbjct: 188 MYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVIT 247
Query: 61 YTYVLKACV-----------VSEFSVYP--------------------LQKGKEIHANIL 89
+ + C+ +S +P ++ GKEIH +
Sbjct: 248 WNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAI 307
Query: 90 RHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALE 149
Y+ +V TL+ +Y+K + +A VFR + +W+++I YA+ + +A
Sbjct: 308 HSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASH 367
Query: 150 LFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRG-LDSIMPVINALIT 208
L +M++ PNS+T+ S+ H +ILRR + N+L+
Sbjct: 368 LLREMLVAGFQ--PNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVD 425
Query: 209 MYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYIS 268
+Y + G+I ++V D + D V++ SLI YGN G G A+ +F+ M G+ P +++
Sbjct: 426 VYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVT 485
Query: 269 FITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 328
+ VL ACSH+ LV EG+ LF M +Y I P ++H++CMVDL GRA L +A +I +M
Sbjct: 486 VVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNM 545
Query: 329 PFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVK 388
P++P W +LL +C IH N ++ + A+ L E++P N G YVL+A++YA A WS +
Sbjct: 546 PYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLA 605
Query: 389 SVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKEQ-GYA 447
VR +M ++K PGC+WI+ F + +P+ LL L+ MK+ GYA
Sbjct: 606 EVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMKDNAGYA 665
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 147/349 (42%), Gaps = 38/349 (10%)
Query: 26 WNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIH 85
WN + A EE++ Y++M GI D FTY VLKAC + G+ +H
Sbjct: 112 WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKAC----GETLDVAFGRVVH 167
Query: 86 ANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPV 145
+I Y+ +++V L+ +Y +F + A +F M +++VSW+A+I CYA M
Sbjct: 168 GSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWS 227
Query: 146 KALELFHQMVLEACD------------------------------SIPNS---VTMVSVX 172
+A ELF +M + + P S V M+
Sbjct: 228 EAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGL 287
Query: 173 XXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVV 232
+HG + D I V N LITMY +C ++ VF + + +
Sbjct: 288 KACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLC 347
Query: 233 SWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESM 292
+WNS+IS Y ++A + M+ G P+ I+ ++L C+ ++ GK +
Sbjct: 348 TWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYI 407
Query: 293 LSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 341
L + + +VD+ ++ ++ A K + D+ + + SL+
Sbjct: 408 LRRKCFKDYTMLWNSLVDVYAKSGKI-VAAKQVSDLMSKRDEVTYTSLI 455
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 8/240 (3%)
Query: 43 LELYRQMNWSGIPSDRFTYTY--VLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVM 100
L R + S + D ++ +L ACV V G ++HA+ + G E + ++
Sbjct: 26 FSLLRLQSSSAVSDDLVLHSAASLLSACV----DVRAFLAGVQVHAHCISSGVEYHSVLV 81
Query: 101 TTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACD 160
L+ Y+ F + A S+ + + W+ +I YAKN++ + + + +MV +
Sbjct: 82 PKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIR 141
Query: 161 SIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGE 220
P++ T SV VHG I S + V NALI+MY R + I
Sbjct: 142 --PDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIAR 199
Query: 221 RVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAG 280
R+FD++ D VSWN++I+ Y + G +A ++F+ M GV S I++ + C G
Sbjct: 200 RLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTG 259
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 133/439 (30%), Positives = 235/439 (53%), Gaps = 11/439 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGR-----GEELLELYRQMNWSGIP 55
MY + GSL A K+F + + +NA + E +L+ M G+
Sbjct: 296 MYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLE 355
Query: 56 SDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISY 115
T++ VLKAC ++ L+ G++IHA I ++ ++ + + + L+++YA G
Sbjct: 356 PSPSTFSVVLKACSAAK----TLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTED 411
Query: 116 ANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXX 175
F + ++ SW++MI C+ +N+ A +LF Q+ + P T+ +
Sbjct: 412 GMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLF--SSHIRPEEYTVSLMMSAC 469
Query: 176 XXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWN 235
+ G+ ++ G+D+ V + I+MY + G + + +VF +V+NPDV +++
Sbjct: 470 ADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYS 529
Query: 236 SLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSK 295
++IS +G +A+ IFE+M G+ P+ +F+ VL AC H GLV +G F+ M +
Sbjct: 530 AMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKND 589
Query: 296 YRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAER 355
YRI+P +H+ C+VDLLGR RL +A LI F+ P W +LL SCR++ ++ + +R
Sbjct: 590 YRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKR 649
Query: 356 ASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIY 415
+ L ELEP +G+YVLL +IY ++ + S + VR+LM R ++K P SWI + + +
Sbjct: 650 VAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTH 709
Query: 416 SFVSSEEDNPQIEKLRALL 434
SF ++ +P + + +L
Sbjct: 710 SFAVADLSHPSSQMIYTML 728
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 136/311 (43%), Gaps = 13/311 (4%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G LD A +FD ER WN+ VG EE L L +M+ G+ +
Sbjct: 192 MYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYA 251
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
VLKAC ++ + ++KG IH + G E +I V T LLD+YAK G + A +F
Sbjct: 252 LGSVLKACCINLNEGF-IEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLF 310
Query: 121 RAMPAKNSVSWSAMIGCYAKND-----MPVKALELFHQMVLEACDSIPNSVTMVSVXXXX 175
MP+KN V+++AMI + + D +A +LF M + P++ ++ V
Sbjct: 311 SLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSV--VLKAC 368
Query: 176 XXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWN 235
+H I + S + +ALI +Y G G + F D+ SW
Sbjct: 369 SAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWT 428
Query: 236 SLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSK 295
S+I + N + A +F + + P + ++ AC+ + G+ +
Sbjct: 429 SMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGE-----QIQG 483
Query: 296 YRIHPGMEHYA 306
Y I G++ +
Sbjct: 484 YAIKSGIDAFT 494
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 141/292 (48%), Gaps = 10/292 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + L AR++FD ER I +N+ +G E+ +EL+ + + + D+FT
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
Y L C L G+ +H ++ +G + + ++ L+D+Y+K G + A S+F
Sbjct: 151 YAGALGFCG----ERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLF 206
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSV-TMVSVXXXXXXXX 179
++ VSW+++I Y + + L L +M + + ++ +++
Sbjct: 207 DRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEG 266
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+H + + G++ + V AL+ MY + G + ++F + + +VV++N++IS
Sbjct: 267 FIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMIS 326
Query: 240 MYG-----NNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGK 286
+ + +A ++F +M +G+ PS +F VL ACS A +E G+
Sbjct: 327 GFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGR 378
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 165/366 (45%), Gaps = 37/366 (10%)
Query: 81 GKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAK 140
GK H ++++ ++++ LL++Y K + +A +F MP +N +S++++I Y +
Sbjct: 66 GKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQ 125
Query: 141 NDMPVKALELFHQMVLEACDS--IPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDS 198
+A+ELF LEA ++ + T +HG ++ GL
Sbjct: 126 MGFYEQAMELF----LEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQ 181
Query: 199 IMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMI 258
+ +IN LI MY +CG++ +FD+ D VSWNSLIS Y G ++ + + M
Sbjct: 182 QVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMH 241
Query: 259 HQGVSPSYISFITVLCACS---HAGLVEEGKILFESMLSKYRIHPGMEH----YACMVDL 311
G++ + + +VL AC + G +E+G + Y GME ++D+
Sbjct: 242 RDGLNLTTYALGSVLKACCINLNEGFIEKGMA-----IHCYTAKLGMEFDIVVRTALLDM 296
Query: 312 LGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFE--------- 362
+ L EAIKL MP + T + G ++ E+ + AS+ F+
Sbjct: 297 YAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMD---EITDEASSEAFKLFMDMQRRG 353
Query: 363 LEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQ--KVPGCSWIEVKKKIYSFVSS 420
LEP + V+L A AK + + L+ K Q + G + IE +Y+ + S
Sbjct: 354 LEPSPSTFSVVLKACSA-AKTLEYGRQIHALICKNNFQSDEFIGSALIE----LYALMGS 408
Query: 421 EEDNPQ 426
ED Q
Sbjct: 409 TEDGMQ 414
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 144/483 (29%), Positives = 237/483 (49%), Gaps = 41/483 (8%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y + A VF E +R + WN A G+ E L L+++M S D +T+
Sbjct: 148 YMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTF 207
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFG---------- 111
+ ++ AC +V G+ +HA +L++G+ + ++L Y K G
Sbjct: 208 SSLMNACSADSSNVV---YGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELE 264
Query: 112 ----------------CISYANS-----VFRAMPAKNSVSWSAMIGCYAKNDMPVKALEL 150
C+ + VF P KN V+W+ MI Y +N +AL
Sbjct: 265 SIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRF 324
Query: 151 FHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMY 210
F +M+ DS + +V +HG ++ G V NAL+ +Y
Sbjct: 325 FVEMMKSGVDS--DHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLY 382
Query: 211 GRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFI 270
+CG+I +R F + N D+VSWN+++ +G +G +A+++++NMI G+ P ++FI
Sbjct: 383 AKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFI 442
Query: 271 TVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIED--- 327
+L CSH+GLVEEG ++FESM+ YRI ++H CM+D+ GR L EA L
Sbjct: 443 GLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSS 502
Query: 328 -MPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSD 386
+ + W +LLG+C H + EL S +L EP ++VLL+++Y W +
Sbjct: 503 LVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKE 562
Query: 387 VKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKE-QG 445
+ VR+ M +R ++K PGCSWIEV ++ +FV + +P++E+L L L EM+ +
Sbjct: 563 GEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQHEMRNPET 622
Query: 446 YAP 448
+ P
Sbjct: 623 FGP 625
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 179/415 (43%), Gaps = 77/415 (18%)
Query: 6 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 65
G + AR+VFD E WN + + +G +E + L+ Q+ +S D +++T +L
Sbjct: 18 GRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAIL 77
Query: 66 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAM-- 123
C S+ ++ G++I + ++R G+ ++ V +L+D+Y K AN VFR M
Sbjct: 78 STCA----SLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCC 133
Query: 124 PAKNSVSWSAMIGCYAKNDMPVKALELFHQMV-------------------LEACDSI-- 162
++N V+W +++ Y + AL++F +M LE+C S+
Sbjct: 134 DSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFK 193
Query: 163 --------PNSVTMVSVXXX-XXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRC 213
P+ T S+ VH +L+ G S + N++++ Y +
Sbjct: 194 EMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKL 253
Query: 214 GE--------------------------ISIGE-----RVFDKVKNPDVVSWNSLISMYG 242
G + IGE VF ++V+W ++I+ YG
Sbjct: 254 GSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYG 313
Query: 243 NNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGM 302
NG G++A++ F M+ GV + ++ VL ACS L+ GK++ + IH G
Sbjct: 314 RNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCL-----IHCGF 368
Query: 303 EHYA----CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 353
+ YA +V+L + + EA + D+ W ++L + +H A+ A
Sbjct: 369 QGYAYVGNALVNLYAKCGDIKEADRAFGDIA-NKDLVSWNTMLFAFGVHGLADQA 422
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 100 MTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEAC 159
+T+ + AK G I+ A VF MP ++V+W+ M+ Y++ + +A+ LF Q L
Sbjct: 7 LTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQ--LRFS 64
Query: 160 DSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIG 219
D+ P+ + ++ + ++R G + +PV N+LI MYG+C +
Sbjct: 65 DAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSA 124
Query: 220 ERVFDKV--KNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFI--TVLCA 275
+VF + + + V+W SL+ Y N + A+ +F M P ++F ++
Sbjct: 125 NKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEM------PKRVAFAWNIMISG 178
Query: 276 CSHAGLVEEGKILFESML 293
+H G +E LF+ ML
Sbjct: 179 HAHCGKLESCLSLFKEML 196
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 5/167 (2%)
Query: 198 SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM 257
S++ + + I + G I+ +VFD + D V+WN++++ Y G ++AI +F +
Sbjct: 2 SVLVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQL 61
Query: 258 IHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANR 317
P SF +L C+ G V+ G+ + +S++ + + ++D+ G+ +
Sbjct: 62 RFSDAKPDDYSFTAILSTCASLGNVKFGRKI-QSLVIRSGFCASLPVNNSLIDMYGKCSD 120
Query: 318 LDEAIKLIEDMPFEP-GPTVWGSLLGSCRIHCNAELAERASAMLFEL 363
A K+ DM + W SLL + + NAE E A + E+
Sbjct: 121 TLSANKVFRDMCCDSRNEVTWCSLLFA---YMNAEQFEAALDVFVEM 164
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/482 (30%), Positives = 241/482 (50%), Gaps = 37/482 (7%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY G +D AR VFD + ++ WN + EE +EL +M + + T
Sbjct: 179 MYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVT 238
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
VL AC V K +H + E ++ + L++ YA G + A +F
Sbjct: 239 LLLVLSACS----KVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIF 294
Query: 121 RAMPAKNSVSWSAMIGCYAK-----------NDMPVK--------------------ALE 149
R+M A++ +SW++++ Y + + MPV+ +LE
Sbjct: 295 RSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLE 354
Query: 150 LFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITM 209
+F +M ++ IP+ TMVSV + +I + + + + V NALI M
Sbjct: 355 IFREM--QSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDM 412
Query: 210 YGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISF 269
Y +CG ++VF + D +W +++ NNG G++AI++F M + P I++
Sbjct: 413 YFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITY 472
Query: 270 ITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMP 329
+ VL AC+H+G+V++ + F M S +RI P + HY CMVD+LGRA + EA +++ MP
Sbjct: 473 LGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMP 532
Query: 330 FEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKS 389
P VWG+LLG+ R+H + +AE A+ + ELEP N Y LL +IYA K W D++
Sbjct: 533 MNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLRE 592
Query: 390 VRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKEQGYAPQ 449
VR+ + ++K PG S IEV + FV+ ++ + Q E++ L +L+ E Y P
Sbjct: 593 VRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPD 652
Query: 450 TN 451
T+
Sbjct: 653 TS 654
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 159/354 (44%), Gaps = 37/354 (10%)
Query: 6 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 65
G + A K+F + E + +WN + + V E + LY M G+ D T+ ++L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 66 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA 125
+ L GK++H ++++ G N++V L+ +Y+ G + A VF
Sbjct: 142 NGL---KRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCK 198
Query: 126 KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXX 185
++ SW+ MI Y + +++EL +M E P SVT++ V
Sbjct: 199 EDVFSWNLMISGYNRMKEYEESIELLVEM--ERNLVSPTSVTLLLVLSACSKVKDKDLCK 256
Query: 186 XVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY---G 242
VH ++ + + + NAL+ Y CGE+ I R+F +K DV+SW S++ Y G
Sbjct: 257 RVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERG 316
Query: 243 N-----------------------NGYGK-----KAIQIFENMIHQGVSPSYISFITVLC 274
N +GY + ++++IF M G+ P + ++VL
Sbjct: 317 NLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLT 376
Query: 275 ACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 328
AC+H G +E G+ + ++ + K +I + ++D+ + ++A K+ DM
Sbjct: 377 ACAHLGSLEIGEWI-KTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDM 429
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 123/278 (44%), Gaps = 13/278 (4%)
Query: 54 IPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKF--G 111
I +D + +L C ++ + K++H+ + G N L + G
Sbjct: 30 ISNDYSRFISILGVCKTTD-------QFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGG 82
Query: 112 CISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTM-VS 170
+SYA +F +P + V W+ MI ++K D + + L+ M+ E P+S T
Sbjct: 83 HVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGV--TPDSHTFPFL 140
Query: 171 VXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPD 230
+ +H +++ GL S + V NAL+ MY CG + + VFD+ D
Sbjct: 141 LNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKED 200
Query: 231 VVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFE 290
V SWN +IS Y +++I++ M VSP+ ++ + VL ACS + K + E
Sbjct: 201 VFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHE 260
Query: 291 SMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 328
+S+ + P + +V+ +D A+++ M
Sbjct: 261 -YVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSM 297
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 133/403 (33%), Positives = 213/403 (52%), Gaps = 6/403 (1%)
Query: 6 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 65
G ++ R++F + ++ WNA + EE + +RQM + + D+ T + +L
Sbjct: 364 GDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVIL 423
Query: 66 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA 125
+C F L+ GK+IH ++R +N H+++ L+ VY++ + + +F
Sbjct: 424 SSCARLRF----LEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCIN 479
Query: 126 KNSVS-WSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXX 184
+ ++ W++MI + N + KAL LF +M A PN + +V
Sbjct: 480 ELDIACWNSMISGFRHNMLDTKALILFRRMHQTAV-LCPNETSFATVLSSCSRLCSLLHG 538
Query: 185 XXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNN 244
HG +++ G S V AL MY +CGEI + FD V + V WN +I YG+N
Sbjct: 539 RQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHN 598
Query: 245 GYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 304
G G +A+ ++ MI G P I+F++VL ACSH+GLVE G + SM + I P ++H
Sbjct: 599 GRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDH 658
Query: 305 YACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELE 364
Y C+VD LGRA RL++A KL E P++ +W LL SCR+H + LA R + L L+
Sbjct: 659 YICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLD 718
Query: 365 PWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSW 407
P ++ YVLL++ Y+ + W D +++ LM K + K PG SW
Sbjct: 719 PQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSW 761
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 168/388 (43%), Gaps = 55/388 (14%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAF--FR--------------------------- 31
+Y E G D ARKVFDE R +Y WNAF FR
Sbjct: 50 LYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNM 109
Query: 32 --ALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANIL 89
L G E+ L +Y++M G RFT VL AC V+ G H +
Sbjct: 110 ISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVF----GMRCHGVAV 165
Query: 90 RHGYEENIHVMTTLLDVYAKFGCI-SYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKAL 148
+ G ++NI V LL +YAK G I Y VF ++ N VS++A+IG A+ + ++A+
Sbjct: 166 KTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAV 225
Query: 149 ELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHG---------FILRRGLDSI 199
++F M + +SV + ++ ++G LR G
Sbjct: 226 QMFRLMCEKGVQ--VDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGD 283
Query: 200 MPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIH 259
+ + N+L+ +Y + +++ E +F ++ +VVSWN +I +G K+++ M
Sbjct: 284 LHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRD 343
Query: 260 QGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLD 319
G P+ ++ I+VL AC +G VE G+ +F S+ P + + M+ +
Sbjct: 344 SGFQPNEVTCISVLGACFRSGDVETGRRIFSSI-----PQPSVSAWNAMLSGYSNYEHYE 398
Query: 320 EAIKLIEDMPFE---PGPTVWGSLLGSC 344
EAI M F+ P T +L SC
Sbjct: 399 EAISNFRQMQFQNLKPDKTTLSVILSSC 426
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 123/292 (42%), Gaps = 43/292 (14%)
Query: 1 MYHELGSL-DCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRF 59
MY + G + D +VF+ + + A LA + E ++++R M G+ D
Sbjct: 182 MYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSV 241
Query: 60 TYTYVLKACVVSE-----FSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCIS 114
+ +L E +Y + GK+IH LR G+ ++H+ +LL++YAK ++
Sbjct: 242 CLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMN 301
Query: 115 YANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXX 174
A +F MP N VSW+ MI + + K++E +M PN VT +SV
Sbjct: 302 GAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQ--PNEVTCISVLGA 359
Query: 175 XXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSW 234
R G++ G R+F + P V +W
Sbjct: 360 CF-----------------------------------RSGDVETGRRIFSSIPQPSVSAW 384
Query: 235 NSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGK 286
N+++S Y N + ++AI F M Q + P + +L +C+ +E GK
Sbjct: 385 NAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGK 436
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 36/226 (15%)
Query: 81 GKEIHANILRHGYEENIHVMTTLLDVY-------------------------------AK 109
GK IH I+R G + + ++ LLD+Y K
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 110 FGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDS-IPNSVTM 168
G + A VF MP ++ VSW+ MI + KAL ++ +MV CD +P+ T+
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV---CDGFLPSRFTL 141
Query: 169 VSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEI-SIGERVFDKVK 227
SV HG ++ GLD + V NAL++MY +CG I G RVF+ +
Sbjct: 142 ASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLS 201
Query: 228 NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVL 273
P+ VS+ ++I +A+Q+F M +GV + +L
Sbjct: 202 QPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNIL 247
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 70/148 (47%), Gaps = 7/148 (4%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G +D AR+ FD + IWN GRG+E + LYR+M SG D T
Sbjct: 563 MYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGIT 622
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILR-HGYEENIHVMTTLLDVYAKFGCISYANSV 119
+ VL AC S ++ G EI +++ R HG E + ++D + G + A +
Sbjct: 623 FVSVLTACSHSGL----VETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKL 678
Query: 120 FRAMPAK-NSVSWSAMI-GCYAKNDMPV 145
A P K +SV W ++ C D+ +
Sbjct: 679 AEATPYKSSSVLWEILLSSCRVHGDVSL 706
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 62/204 (30%)
Query: 187 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK------------------- 227
+HGFI+R G+ S + N L+ +Y CG+ +VFD++
Sbjct: 28 IHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGD 87
Query: 228 ------------NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCA 275
DVVSWN++IS+ G+ +KA+ +++ M+ G PS + +VL A
Sbjct: 88 LGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSA 147
Query: 276 CS-----------HAGLVEEG--KILF--ESMLSKY-----------RI-----HPGMEH 304
CS H V+ G K +F ++LS Y R+ P
Sbjct: 148 CSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVS 207
Query: 305 YACMVDLLGRANRLDEAIKLIEDM 328
Y ++ L R N++ EA+++ M
Sbjct: 208 YTAVIGGLARENKVLEAVQMFRLM 231
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/386 (35%), Positives = 213/386 (55%), Gaps = 8/386 (2%)
Query: 24 YIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKE 83
++WN R+ + +++Y M S + DR++ V+KA V ++ GKE
Sbjct: 83 FLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAV----QIHDFTLGKE 138
Query: 84 IHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDM 143
+H+ +R G+ + + + +Y K G A VF P + SW+A+IG
Sbjct: 139 LHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGR 198
Query: 144 PVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD--SIMP 201
+A+E+F M + P+ TMVSV +H +L+ + S +
Sbjct: 199 ANEAVEMFVDMKRSGLE--PDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIM 256
Query: 202 VINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG 261
++N+LI MYG+CG + + +F++++ +VVSW+S+I Y NG +A++ F M G
Sbjct: 257 MLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFG 316
Query: 262 VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEA 321
V P+ I+F+ VL AC H GLVEEGK F M S++ + PG+ HY C+VDLL R +L EA
Sbjct: 317 VRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEA 376
Query: 322 IKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEA 381
K++E+MP +P VWG L+G C + E+AE + + ELEPWN G YV+LA++YA
Sbjct: 377 KKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALR 436
Query: 382 KMWSDVKSVRKLMGKRVLQKVPGCSW 407
MW DV+ VRKLM + + K+P S+
Sbjct: 437 GMWKDVERVRKLMKTKKVAKIPAYSY 462
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 119/253 (47%), Gaps = 32/253 (12%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y + G + ARKVFDE ER + WNA L GR E +E++ M SG+ D FT
Sbjct: 161 LYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFT 220
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEE--NIHVMTTLLDVYAKFGCISYANS 118
V +C + L ++H +L+ EE +I ++ +L+D+Y K G + A+
Sbjct: 221 MVSVTASC----GGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASH 276
Query: 119 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
+F M +N VSWS+MI YA N ++ALE F QM PN +T V V
Sbjct: 277 IFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQM--REFGVRPNKITFVGV------- 327
Query: 179 XXXXXXXXVHGFILRRG------------LDSIMPVINALITMYGRCGEISIGERVFDKV 226
VHG ++ G L+ + ++ + R G++ ++V +++
Sbjct: 328 ----LSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEM 383
Query: 227 K-NPDVVSWNSLI 238
P+V+ W L+
Sbjct: 384 PMKPNVMVWGCLM 396
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/414 (34%), Positives = 226/414 (54%), Gaps = 5/414 (1%)
Query: 16 DETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY-TYVLKACVVSEFS 74
D R R I F + G L E+ + + S + D +++ Y L + V S
Sbjct: 73 DSWRFRGQAISEDFDLSRTKNGVSSVLEEVMLEDSSSSVKRDGWSFDAYGLSSAVRSCGL 132
Query: 75 VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAM 134
+ G H L+ G+ ++++ ++L+ +Y G + A VF MP +N VSW+AM
Sbjct: 133 NRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAM 192
Query: 135 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 194
I +A+ L+L+ +M D PN T ++ VH L
Sbjct: 193 ISGFAQEWRVDICLKLYSKMRKSTSD--PNDYTFTALLSACTGSGALGQGRSVHCQTLHM 250
Query: 195 GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIF 254
GL S + + N+LI+MY +CG++ R+FD+ N DVVSWNS+I+ Y +G +AI++F
Sbjct: 251 GLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELF 310
Query: 255 ENMI-HQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 313
E M+ G P I+++ VL +C HAGLV+EG+ F ++++++ + P + HY+C+VDLLG
Sbjct: 311 ELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFF-NLMAEHGLKPELNHYSCLVDLLG 369
Query: 314 RANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVL 373
R L EA++LIE+MP +P +WGSLL SCR+H + RA+ LEP A +V
Sbjct: 370 RFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQ 429
Query: 374 LADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQI 427
LA++YA W + +VRKLM + L+ PGCSWIE+ ++ F + + N ++
Sbjct: 430 LANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRM 483
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 115/239 (48%), Gaps = 6/239 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y + G ++ A KVF+E ER + W A A R + L+LY +M S + +T
Sbjct: 164 LYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYT 223
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+T +L AC S L +G+ +H L G + +H+ +L+ +Y K G + A +F
Sbjct: 224 FTALLSACTGSG----ALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIF 279
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
K+ VSW++MI YA++ + ++A+ELF ++++ + P+++T + V
Sbjct: 280 DQFSNKDVVSWNSMIAGYAQHGLAMQAIELF-ELMMPKSGTKPDAITYLGVLSSCRHAGL 338
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK-NPDVVSWNSLI 238
+ GL + + L+ + GR G + + + + P+ V W SL+
Sbjct: 339 VKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 139/410 (33%), Positives = 219/410 (53%), Gaps = 14/410 (3%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM--NWSGIPSDRF 59
Y + G + AR+VF+ +R + +WNA + + G +E L + M + + D F
Sbjct: 187 YGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYF 246
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
T++ +L AC + ++GK+IHA + + Y+ +I V T LL++YAK +S A
Sbjct: 247 TFSSLLSACRI--------EQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDAREC 298
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F +M +N VSW+AMI +A+N +A+ LF QM+LE P+ +T SV
Sbjct: 299 FESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQ--PDELTFASVLSSCAKFS 356
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
V + ++G + V N+LI+ Y R G +S F ++ PD+VSW S+I
Sbjct: 357 AIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIG 416
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
++G+ ++++Q+FE+M+ Q + P I+F+ VL ACSH GLV+EG F+ M Y+I
Sbjct: 417 ALASHGFAEESLQMFESML-QKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIE 475
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAM 359
EHY C++DLLGRA +DEA ++ MP EP + G C IH E + +
Sbjct: 476 AEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKK 535
Query: 360 LFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQ-KVPGCSWI 408
L E+EP NY +L++ Y W+ +RK + K PGCSW+
Sbjct: 536 LLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 165/370 (44%), Gaps = 16/370 (4%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVG-----RGEELLELYRQMNWSGIPS 56
Y ++ D A K+FDE R I WN + R ++ ++ +
Sbjct: 81 YTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSL 140
Query: 57 DRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYA 116
D ++ +++ C S ++ G ++H +++ G E + T+L+ Y K G I A
Sbjct: 141 DHVSFMGLIRLCTDST----NMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEA 196
Query: 117 NSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXX 176
VF A+ ++ V W+A++ Y N M +A L M + + T S+
Sbjct: 197 RRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSL----L 252
Query: 177 XXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNS 236
+H + + +PV AL+ MY + +S F+ + +VVSWN+
Sbjct: 253 SACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNA 312
Query: 237 LISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKY 296
+I + NG G++A+++F M+ + + P ++F +VL +C+ + E K + ++M++K
Sbjct: 313 MIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQV-QAMVTKK 371
Query: 297 RIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA-ER 355
+ ++ R L EA+ + EP W S++G+ H AE + +
Sbjct: 372 GSADFLSVANSLISSYSRNGNLSEALLCFHSIR-EPDLVSWTSVIGALASHGFAEESLQM 430
Query: 356 ASAMLFELEP 365
+ML +L+P
Sbjct: 431 FESMLQKLQP 440
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 117/265 (44%), Gaps = 20/265 (7%)
Query: 74 SVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSA 133
S+ L K+ H +++ G ++ + LL Y K A+ +F MP +N V+W+
Sbjct: 48 SLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNI 107
Query: 134 MIGCYAKNDMPVKALELFHQMVLEAC--------DSIPNSVTMVSVXXXXXXXXXXXXXX 185
+I + D H+ L C D + V+ + +
Sbjct: 108 LIHGVIQRDGDTN-----HRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGI 162
Query: 186 XVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNG 245
+H ++++GL+S +L+ YG+CG I RVF+ V + D+V WN+L+S Y NG
Sbjct: 163 QLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNG 222
Query: 246 YGKKAIQIFENM--IHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGME 303
+A + + M Y +F ++L AC +E+GK + ++L K +
Sbjct: 223 MIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQI-HAILFKVSYQFDIP 277
Query: 304 HYACMVDLLGRANRLDEAIKLIEDM 328
++++ ++N L +A + E M
Sbjct: 278 VATALLNMYAKSNHLSDARECFESM 302
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 86/171 (50%), Gaps = 7/171 (4%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + L AR+ F+ R + WNA A G G E + L+ QM + D T
Sbjct: 285 MYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELT 344
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ VL +C ++FS + + K++ A + + G + + V +L+ Y++ G +S A F
Sbjct: 345 FASVLSSC--AKFSA--IWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCF 400
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 171
++ + VSW+++IG A + ++L++F M+ + P+ +T + V
Sbjct: 401 HSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQKL---QPDKITFLEV 448
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 248 bits (632), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 146/452 (32%), Positives = 243/452 (53%), Gaps = 14/452 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY GS+ + VF RER + WN A G +E L L +M G D T
Sbjct: 362 MYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYIT 421
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYE-ENIHVMTTLLDVYAKFGCISYANSV 119
T +L A ++ + GK+ HA ++R G + E ++ + L+D+Y+K G I + +
Sbjct: 422 VTALLSAAS----NLRNKEIGKQTHAFLIRQGIQFEGMN--SYLIDMYSKSGLIRISQKL 475
Query: 120 FRA--MPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXX 177
F ++ +W++MI Y +N K +F +M+ + PN+VT+ S+
Sbjct: 476 FEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIR--PNAVTVASILPACSQ 533
Query: 178 XXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSL 237
+HGF +R+ LD + V +AL+ MY + G I E +F + K + V++ ++
Sbjct: 534 IGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTM 593
Query: 238 ISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYR 297
I YG +G G++AI +F +M G+ P I+F+ VL ACS++GL++EG +FE M Y
Sbjct: 594 ILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYN 653
Query: 298 IHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPG-PTVWGSLLGSCRIHCNAELAERA 356
I P EHY C+ D+LGR R++EA + ++ + E +WGSLLGSC++H ELAE
Sbjct: 654 IQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETV 713
Query: 357 SAMLFELEPWN--AGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKI 414
S L + + +G VLL+++YAE + W V VR+ M ++ L+K G S IE+ +
Sbjct: 714 SERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYV 773
Query: 415 YSFVSSEEDNPQIEKLRALLIKLSTEMKEQGY 446
FVS ++++P ++ ++ L+ +M+ +
Sbjct: 774 NCFVSRDQEHPHSSEIYDVIDGLAKDMRGDSF 805
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 167/331 (50%), Gaps = 15/331 (4%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSG-IPSDRF 59
MY ELG ++ +R+VFD ER I +WN E +EL+ + S I SD
Sbjct: 260 MYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEV 319
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
TY+L A VS ++ ++ G++ H + ++ E I ++ +L+ +Y++ G + + V
Sbjct: 320 --TYLLAASAVS--ALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGV 375
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F +M ++ VSW+ MI + +N + + L L ++M + + +T+ ++
Sbjct: 376 FLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFK--IDYITVTALLSAASNLR 433
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFD--KVKNPDVVSWNSL 237
H F++R+G+ + + LI MY + G I I +++F+ D +WNS+
Sbjct: 434 NKEIGKQTHAFLIRQGIQ-FEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSM 492
Query: 238 ISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYR 297
IS Y NG+ +K +F M+ Q + P+ ++ ++L ACS G V+ GK L + +Y
Sbjct: 493 ISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQY- 551
Query: 298 IHPGMEHYACMVDLLGRANRLDEAIKLIEDM 328
+ + + +VD+ +A AIK EDM
Sbjct: 552 LDQNVFVASALVDMYSKAG----AIKYAEDM 578
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 153/339 (45%), Gaps = 16/339 (4%)
Query: 9 DCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKAC 68
D RKVFD R + + WN GR E + M + ++ V A
Sbjct: 165 DVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAV 224
Query: 69 VVSEFSVYPLQKGKEIHANILRHG--YEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK 126
+S ++K + +L+ G Y +++ V+++ + +YA+ G I + VF + +
Sbjct: 225 SISR----SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVER 280
Query: 127 NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDS---IPNSVTMVSVXXXXXXXXXXXX 183
N W+ MIG Y +ND V+++ELF LEA S + + VT +
Sbjct: 281 NIEVWNTMIGVYVQNDCLVESIELF----LEAIGSKEIVSDEVTYLLAASAVSALQQVEL 336
Query: 184 XXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGN 243
HGF+ + + + ++N+L+ MY RCG + VF ++ DVVSWN++IS +
Sbjct: 337 GRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQ 396
Query: 244 NGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGME 303
NG + + + M QG YI+ +L A S+ E GK ++ + GM
Sbjct: 397 NGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMN 456
Query: 304 HYACMVDLLGRANRLDEAIKLIEDMPF-EPGPTVWGSLL 341
Y ++D+ ++ + + KL E + E W S++
Sbjct: 457 SY--LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMI 493
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 134/301 (44%), Gaps = 18/301 (5%)
Query: 6 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSG--IPSDRFTYTY 63
G+ AR++FD + T +WN E L Y +M + D +TY+
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 64 VLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKF----GCISY--AN 117
LKAC ++ L+ GK +H +++R + V +L+++Y C Y
Sbjct: 113 TLKACAETK----NLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVR 168
Query: 118 SVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXX 177
VF M KN V+W+ +I Y K +A F M+ + P+ V+ V+V
Sbjct: 169 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMM--RMEVKPSPVSFVNVFPAVSI 226
Query: 178 XXXXXXXXXVHGFILRRGLDSI--MPVINALITMYGRCGEISIGERVFDKVKNPDVVSWN 235
+G +L+ G + + + V+++ I+MY G+I RVFD ++ WN
Sbjct: 227 SRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWN 286
Query: 236 SLISMYGNNGYGKKAIQIF-ENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLS 294
++I +Y N ++I++F E + + + ++++ A S VE G+ F +S
Sbjct: 287 TMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGR-QFHGFVS 345
Query: 295 K 295
K
Sbjct: 346 K 346
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 108/241 (44%), Gaps = 22/241 (9%)
Query: 116 ANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXX 175
A +F A+P +V W+ +I + N++P +AL + +M A + ++ T S
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 176 XXXXXXXXXXXVHGFILRRGLDSIMPVINALITMY------GRCGEISIGERVFDKVKNP 229
VH ++R +S V N+L+ MY C E + +VFD ++
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRK 177
Query: 230 DVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILF 289
+VV+WN+LIS Y G +A + F M+ V PS +SF+ V A S + +++ + +
Sbjct: 178 NVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFY 237
Query: 290 ESML--------SKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 341
ML + + + YA + D+ E+ + + D E VW +++
Sbjct: 238 GLMLKLGDEYVKDLFVVSSAISMYAELGDI--------ESSRRVFDSCVERNIEVWNTMI 289
Query: 342 G 342
G
Sbjct: 290 G 290
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 142/435 (32%), Positives = 231/435 (53%), Gaps = 17/435 (3%)
Query: 5 LGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYV 64
LG D A K+F++ ER WN+ L G + L+ +M D ++ +
Sbjct: 168 LGVRD-AMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMP----QRDLISWNTM 222
Query: 65 LKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP 124
L + K E+ + E N +T++ Y+K G + A +F MP
Sbjct: 223 LDGYA----RCREMSKAFELFEKM----PERNTVSWSTMVMGYSKAGDMEMARVMFDKMP 274
Query: 125 --AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXX 182
AKN V+W+ +I YA+ + +A L QMV ++ ++S+
Sbjct: 275 LPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKF--DAAAVISILAACTESGLLS 332
Query: 183 XXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYG 242
+H + R L S V+NAL+ MY +CG + VF+ + D+VSWN+++ G
Sbjct: 333 LGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLG 392
Query: 243 NNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGM 302
+G+GK+AI++F M +G+ P ++FI VLC+C+HAGL++EG F SM Y + P +
Sbjct: 393 VHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQV 452
Query: 303 EHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFE 362
EHY C+VDLLGR RL EAIK+++ MP EP +WG+LLG+CR+H ++A+ L +
Sbjct: 453 EHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVK 512
Query: 363 LEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEE 422
L+P + GNY LL++IYA A+ W V +R M ++K G S +E++ I+ F ++
Sbjct: 513 LDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDK 572
Query: 423 DNPQIEKLRALLIKL 437
+P+ +++ +L L
Sbjct: 573 SHPKSDQIYQMLGSL 587
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 165/349 (47%), Gaps = 20/349 (5%)
Query: 9 DCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKAC 68
+ A +VF++ +E +++ N+ RA A + + ++ +M G+ +D FTY ++LKAC
Sbjct: 68 NLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKAC 127
Query: 69 VVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISY--ANSVFRAMPAK 126
S S P+ K +H +I + G +I+V L+D Y++ G + A +F M +
Sbjct: 128 --SGQSWLPVV--KMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER 183
Query: 127 NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXX 186
++VSW++M+G K A LF +M + ++ ++
Sbjct: 184 DTVSWNSMLGGLVKAGELRDARRLFDEMPQR------DLISWNTMLDGYARCREMSKAFE 237
Query: 187 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNP--DVVSWNSLISMYGNN 244
+ + R S + ++ Y + G++ + +FDK+ P +VV+W +I+ Y
Sbjct: 238 LFEKMPERNTVS----WSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEK 293
Query: 245 GYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 304
G K+A ++ + M+ G+ + I++L AC+ +GL+ G + S+L + +
Sbjct: 294 GLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLG-MRIHSILKRSNLGSNAYV 352
Query: 305 YACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 353
++D+ + L +A + D+P + W ++L +H + + A
Sbjct: 353 LNALLDMYAKCGNLKKAFDVFNDIP-KKDLVSWNTMLHGLGVHGHGKEA 400
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 128/302 (42%), Gaps = 41/302 (13%)
Query: 2 YHELGSLDCARKVFDETR--ERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRF 59
Y + G ++ AR +FD+ + + W A G +E L QM SG+ D
Sbjct: 257 YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAA 316
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
+L AC S L G IH+ + R N +V+ LLD+YAK G + A V
Sbjct: 317 AVISILAACTESGL----LSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDV 372
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F +P K+ VSW+ M+ + +A+ELF +M E P+ VT ++V
Sbjct: 373 FNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIR--PDKVTFIAVLCSCN--- 427
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
H ++ G+D + E+V+D V P V + L+
Sbjct: 428 --------HAGLIDEGIDYFYSM-----------------EKVYDLV--PQVEHYGCLVD 460
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
+ G G K+AI++ + M + P+ + + +L AC V+ K + ++++
Sbjct: 461 LLGRVGRLKEAIKVVQTM---PMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCD 517
Query: 300 PG 301
PG
Sbjct: 518 PG 519
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 116/255 (45%), Gaps = 13/255 (5%)
Query: 78 LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGC 137
L + K++HA I+R E++H+ L+ + + A VF + N +++I
Sbjct: 32 LNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRA 91
Query: 138 YAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD 197
+A+N P +A +F +M + ++ T + +H I + GL
Sbjct: 92 HAQNSQPYQAFFVFSEM--QRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLS 149
Query: 198 SIMPVINALITMYGRCGEISIGE--RVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFE 255
S + V NALI Y RCG + + + ++F+K+ D VSWNS++ G + A ++F+
Sbjct: 150 SDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFD 209
Query: 256 NMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRA 315
M + + IS+ T+L + + + LFE M + + ++ MV +A
Sbjct: 210 EMPQRDL----ISWNTMLDGYARCREMSKAFELFEKMPERNTV-----SWSTMVMGYSKA 260
Query: 316 NRLDEAIKLIEDMPF 330
++ A + + MP
Sbjct: 261 GDMEMARVMFDKMPL 275
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 88/178 (49%), Gaps = 19/178 (10%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G+L A VF++ ++ + WN L + G G+E +EL+ +M GI D+ T
Sbjct: 359 MYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVT 418
Query: 61 YTYVLKAC----VVSEF--SVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCIS 114
+ VL +C ++ E Y ++K ++ + +G L+D+ + G +
Sbjct: 419 FIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYG---------CLVDLLGRVGRLK 469
Query: 115 YANSVFRAMPAK-NSVSWSAMIG-CYAKNDMPVKALELFHQMVLEACDSIPNSVTMVS 170
A V + MP + N V W A++G C N++ + L + + L+ CD P + +++S
Sbjct: 470 EAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCD--PGNYSLLS 525
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 4/158 (2%)
Query: 187 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 246
+H I+RR L + + LI+ C + ++ RVF++V+ P+V NSLI + N
Sbjct: 38 LHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQ 97
Query: 247 GKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA 306
+A +F M G+ ++ +L ACS + K++ + + K + +
Sbjct: 98 PYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMM-HNHIEKLGLSSDIYVPN 156
Query: 307 CMVDLLGRANRLD--EAIKLIEDMPFEPGPTVWGSLLG 342
++D R L +A+KL E M E W S+LG
Sbjct: 157 ALIDCYSRCGGLGVRDAMKLFEKMS-ERDTVSWNSMLG 193
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 143/443 (32%), Positives = 229/443 (51%), Gaps = 7/443 (1%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + L+ AR+VF + +++ WN+ + G + +E+ +M G + T
Sbjct: 252 MYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTT 311
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
T +L AC S L GK IH ++R +I+V +L+D+Y K G + A +VF
Sbjct: 312 LTSILMACSRSR----NLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVF 367
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+ SW+ MI Y KA+E++ QMV + P+ VT SV
Sbjct: 368 SKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMV--SVGVKPDVVTFTSVLPACSQLAA 425
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+H I L++ +++AL+ MY +CG R+F+ + DVVSW +IS
Sbjct: 426 LEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISA 485
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
YG++G ++A+ F+ M G+ P ++ + VL AC HAGL++EG F M SKY I P
Sbjct: 486 YGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEP 545
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMP-FEPGPTVWGSLLGSCRIHCNAELAERASAM 359
+EHY+CM+D+LGRA RL EA ++I+ P + +L +C +H L +R + +
Sbjct: 546 IIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARL 605
Query: 360 LFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVS 419
L E P +A Y++L ++YA + W + VR M + L+K PGCSWIE+ K+ F +
Sbjct: 606 LVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFA 665
Query: 420 SEEDNPQIEKLRALLIKLSTEMK 442
+ + + E + L LS M+
Sbjct: 666 EDRSHLRAENVYECLALLSGHME 688
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 172/329 (52%), Gaps = 7/329 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + + + +VFDE ER + WN G E+ LEL+ +M SG + +
Sbjct: 151 MYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVS 210
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
T + AC + L++GKEIH ++ G+E + +V + L+D+Y K C+ A VF
Sbjct: 211 LTVAISACS----RLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVF 266
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+ MP K+ V+W++MI Y +E+ ++M++E + P+ T+ S+
Sbjct: 267 QKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG--TRPSQTTLTSILMACSRSRN 324
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+HG+++R +++ + V +LI +Y +CGE ++ E VF K + SWN +IS
Sbjct: 325 LLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISS 384
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
Y + G KA+++++ M+ GV P ++F +VL ACS +E+GK + S +S+ R+
Sbjct: 385 YISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLS-ISESRLET 443
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMP 329
+ ++D+ + EA ++ +P
Sbjct: 444 DELLLSALLDMYSKCGNEKEAFRIFNSIP 472
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 142/282 (50%), Gaps = 12/282 (4%)
Query: 11 ARKVFDETRERT-IYIWNAFFRALAMVGRGEELLELY-RQMNWSGIPSDRFTYTYVLKA- 67
AR VF+ R+ +YIWN+ + + LE++ R +N S D FT+ V+KA
Sbjct: 58 ARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAY 117
Query: 68 -CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK 126
+ EF G+ IH +++ GY ++ V ++L+ +YAKF + VF MP +
Sbjct: 118 GALGREF------LGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPER 171
Query: 127 NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXX 186
+ SW+ +I C+ ++ KALELF +M E+ PNSV++
Sbjct: 172 DVASWNTVISCFYQSGEAEKALELFGRM--ESSGFEPNSVSLTVAISACSRLLWLERGKE 229
Query: 187 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 246
+H +++G + V +AL+ MYG+C + + VF K+ +V+WNS+I Y G
Sbjct: 230 IHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGD 289
Query: 247 GKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKIL 288
K ++I MI +G PS + ++L ACS + + GK +
Sbjct: 290 SKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFI 331
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 132/273 (48%), Gaps = 12/273 (4%)
Query: 74 SVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISY--ANSVFRAMPAKNSVS- 130
S L++ K +H IL G ++ + +L++VY F C + A VF ++ V
Sbjct: 16 STKSLRRIKLVHQRILTLGLRRDVVLCKSLINVY--FTCKDHCSARHVFENFDIRSDVYI 73
Query: 131 WSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGF 190
W++++ Y+KN M LE+F ++ L +P+S T +V +H
Sbjct: 74 WNSLMSGYSKNSMFHDTLEVFKRL-LNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTL 132
Query: 191 ILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKA 250
+++ G + V ++L+ MY + +VFD++ DV SWN++IS + +G +KA
Sbjct: 133 VVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKA 192
Query: 251 IQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHY--ACM 308
+++F M G P+ +S + ACS +E GK + + K ++ Y + +
Sbjct: 193 LELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKK---GFELDEYVNSAL 249
Query: 309 VDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 341
VD+ G+ + L+ A ++ + MP W S++
Sbjct: 250 VDMYGKCDCLEVAREVFQKMP-RKSLVAWNSMI 281
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 152/527 (28%), Positives = 262/527 (49%), Gaps = 25/527 (4%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 70
A +VF + W L G ++ L +M + + T + VL+AC
Sbjct: 380 ASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACS- 438
Query: 71 SEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVS 130
+ +++ EIHA +LR + + V +L+D YA + YA +V R+M +++++
Sbjct: 439 ---KLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNIT 495
Query: 131 WSAMIGCYAKNDMPVKALELFHQMVLEACDSIP-NSVTMVSVXXXXXXXXXXXXXXXVHG 189
+++++ + + AL + + M D I + +++ +H
Sbjct: 496 YTSLVTRFNELGKHEMALSVINYMY---GDGIRMDQLSLPGFISASANLGALETGKHLHC 552
Query: 190 FILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKK 249
+ ++ G V+N+L+ MY +CG + ++VF+++ PDVVSWN L+S +NG+
Sbjct: 553 YSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISS 612
Query: 250 AIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMV 309
A+ FE M + P ++F+ +L ACS+ L + G F+ M Y I P +EHY +V
Sbjct: 613 ALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLV 672
Query: 310 DLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAG 369
+LGRA RL+EA ++E M +P ++ +LL +CR N L E + L P +
Sbjct: 673 GILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPA 732
Query: 370 NYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEK 429
Y+LLAD+Y E+ + R LM ++ L K G S +EV+ K++SFVS ED +++K
Sbjct: 733 LYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVS--EDVTRVDK 790
Query: 430 LRALLIKLST---EMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLINTVKGE 486
+ ++ + E+K G + N E HS K AV +G I
Sbjct: 791 TNGIYAEIESIKEEIKRFGSPYRGN---------ENASF---HSAKQAVVYGFIYASPEA 838
Query: 487 TIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSC 533
+ + KN LC+DCH F +++ +++I VRD N+ H F++G CSC
Sbjct: 839 PVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSC 885
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 189/436 (43%), Gaps = 47/436 (10%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y + ++ A +V + + E+ +++W + R +E + + +M G+ + FTY
Sbjct: 269 YSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTY 328
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISY-ANSVF 120
+ +L C +V L GK+IH+ ++ G+E++ V L+D+Y K A+ VF
Sbjct: 329 SAILSLCS----AVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVF 384
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
AM + N VSW+ +I + L +MV + PN VT+ V
Sbjct: 385 GAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVE--PNVVTLSGVLRACSKLRH 442
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+H ++LRR +D M V N+L+ Y ++ V +K D +++ SL++
Sbjct: 443 VRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTR 502
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
+ G + A+ + M G+ +S + A ++ G +E GK L Y +
Sbjct: 503 FNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGK-----HLHCYSVKS 557
Query: 301 GMEHYA----CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERA 356
G A +VD+ + L++A K+ E++ P W L+ + N ++
Sbjct: 558 GFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIA-TPDVVSWNGLVSG--LASNGFISSAL 614
Query: 357 SAM----LFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKK 412
SA + E EP ++ +++L + ++ +D+ G + +V K
Sbjct: 615 SAFEEMRMKETEP-DSVTFLILLSACSNGRL-TDL----------------GLEYFQVMK 656
Query: 413 KIYSFVSSEEDNPQIE 428
KIY+ PQ+E
Sbjct: 657 KIYNI------EPQVE 666
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 127/276 (46%), Gaps = 7/276 (2%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 70
ARK+FDE RT++ W A L L+ +M SG + FT++ V+++C
Sbjct: 77 ARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCA- 135
Query: 71 SEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVS 130
+ + G +H ++++ G+E N V ++L D+Y+K G A +F ++ +++S
Sbjct: 136 ---GLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTIS 192
Query: 131 WSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGF 190
W+ MI +AL+ + +MV PN T V + +H
Sbjct: 193 WTMMISSLVGARKWREALQFYSEMVKAGVP--PNEFTFVKLLGASSFLGLEFGKT-IHSN 249
Query: 191 ILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKA 250
I+ RG+ + + +L+ Y + ++ RV + DV W S++S + N K+A
Sbjct: 250 IIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEA 309
Query: 251 IQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGK 286
+ F M G+ P+ ++ +L CS ++ GK
Sbjct: 310 VGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGK 345
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 150/330 (45%), Gaps = 11/330 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y + G A ++F + W +L + E L+ Y +M +G+P + FT
Sbjct: 168 LYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFT 227
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ +L A S L+ GK IH+NI+ G N+ + T+L+D Y++F + A V
Sbjct: 228 FVKLLGAS-----SFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVL 282
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+ ++ W++++ + +N +A+ F +M + PN+ T ++
Sbjct: 283 NSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEM--RSLGLQPNNFTYSAILSLCSAVRS 340
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISI-GERVFDKVKNPDVVSWNSLIS 239
+H ++ G + V NAL+ MY +C + RVF + +P+VVSW +LI
Sbjct: 341 LDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLIL 400
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKIL-FESMLSKYRI 298
++G+ + + M+ + V P+ ++ VL ACS V ++L + L + +
Sbjct: 401 GLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVR--RVLEIHAYLLRRHV 458
Query: 299 HPGMEHYACMVDLLGRANRLDEAIKLIEDM 328
M +VD + ++D A +I M
Sbjct: 459 DGEMVVGNSLVDAYASSRKVDYAWNVIRSM 488
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 119/245 (48%), Gaps = 4/245 (1%)
Query: 81 GKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAK 140
G IH +++ G EN+ + LL +Y K I A +F M + +W+ MI + K
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 141 NDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIM 200
+ AL LF +M+ A + PN T SV VHG +++ G +
Sbjct: 102 SQEFASALSLFEEMM--ASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNS 159
Query: 201 PVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQ 260
V ++L +Y +CG+ +F ++N D +SW +IS ++A+Q + M+
Sbjct: 160 VVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKA 219
Query: 261 GVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDE 320
GV P+ +F+ +L A S GL E GK + +++ + I + +VD + +++++
Sbjct: 220 GVPPNEFTFVKLLGASSFLGL-EFGKTIHSNIIVR-GIPLNVVLKTSLVDFYSQFSKMED 277
Query: 321 AIKLI 325
A++++
Sbjct: 278 AVRVL 282
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/434 (32%), Positives = 228/434 (52%), Gaps = 32/434 (7%)
Query: 6 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 65
G L AR+VFDE + T+ +N G +ELL L ++M++SG +D +T + VL
Sbjct: 83 GCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVL 142
Query: 66 KACVVSEFS-VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP 124
KA + + P + +HA I++ E + ++T L+D Y K G + A +VF M
Sbjct: 143 KASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMK 202
Query: 125 AKNSVSWSAMIGCYAK-----------NDMPVKALELFHQMV------------------ 155
+N V ++MI Y N VK + +++ MV
Sbjct: 203 DENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYI 262
Query: 156 -LEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCG 214
++ PN T SV VH I++ G+ + + + ++L+ MY +CG
Sbjct: 263 SMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCG 322
Query: 215 EISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLC 274
I+ RVFD+++ +V SW S+I YG NG ++A+++F M + P+Y++F+ L
Sbjct: 323 GINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALS 382
Query: 275 ACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGP 334
ACSH+GLV++G +FESM Y + P MEHYAC+VDL+GRA L++A + MP P
Sbjct: 383 ACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDS 442
Query: 335 TVWGSLLGSCRIHCNAELAERASAMLFELEP-WNAGNYVLLADIYAEAKMWSDVKSVRKL 393
+W +LL SC +H N ELA A++ LF+L G Y+ L+++YA W +V +R++
Sbjct: 443 DIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREV 502
Query: 394 MGKRVLQKVPGCSW 407
M +R + K G SW
Sbjct: 503 MKRRRISKTIGRSW 516
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 149/331 (45%), Gaps = 43/331 (12%)
Query: 79 QKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCY 138
+ GK+IHA+I++ G++ ++++ LL ++ K GC+SYA VF +P +++ MI Y
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 139 AKNDMPVKALELFHQMVLEACDSIPNSVTMV---SVXXXXXXXXXXXXXXXVHGFILRRG 195
K+ + + L L +M + +++MV S VH I++
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 196 LDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY--------- 246
++ +I AL+ Y + G++ VF+ +K+ +VV S+IS Y N G+
Sbjct: 171 VELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFN 230
Query: 247 -----------------------GKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVE 283
K+++ ++ +M G P+ +F +V+ ACS E
Sbjct: 231 TTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHE 290
Query: 284 EGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGS 343
G+ + ++ K ++ ++ + ++D+ + +++A ++ + M E W S++
Sbjct: 291 VGQQVHAQIM-KSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQ-EKNVFSWTSMIDG 348
Query: 344 CRIHCNAELAERASAML--FELEPWNAGNYV 372
+ N E A + F +EP NYV
Sbjct: 349 YGKNGNPEEALELFTRMKEFRIEP----NYV 375
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/409 (33%), Positives = 213/409 (52%), Gaps = 8/409 (1%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y + GSL+ + K+F + W + G E + L+ +M G D T
Sbjct: 494 LYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDEST 553
Query: 61 YTYVLKACVVSEFSVYP-LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
VL C S +P L +GKEIH LR G ++ + + + L+++Y+K G + A V
Sbjct: 554 LAAVLTVC-----SSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQV 608
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
+ +P + VS S++I Y+++ + LF MV+ +S + S+
Sbjct: 609 YDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGF--TMDSFAISSILKAAALSD 666
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
VH +I + GL + V ++L+TMY + G I + F ++ PD+++W +LI+
Sbjct: 667 ESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIA 726
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
Y +G +A+Q++ M +G P ++F+ VL ACSH GLVEE SM+ Y I
Sbjct: 727 SYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIE 786
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAM 359
P HY CMVD LGR+ RL EA I +M +P VWG+LL +C+IH EL + A+
Sbjct: 787 PENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKK 846
Query: 360 LFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWI 408
ELEP +AG Y+ L++I AE W +V+ RKLM +QK PG S +
Sbjct: 847 AIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 159/351 (45%), Gaps = 18/351 (5%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y + G + A +VF ++ W LE++++M SG+ + T
Sbjct: 294 LYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCT 353
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
T V+ AC + + ++HA + + G+ + V L+ +Y+K G I + VF
Sbjct: 354 VTSVISACGRPSM----VCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVF 409
Query: 121 RAM---PAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSV-TMVSVXXXXX 176
+ +N V+ MI ++++ P KA+ LF +M+ E + SV +++SV
Sbjct: 410 EDLDDIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLN 467
Query: 177 XXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNS 236
VHG+ L+ GL + V ++L T+Y +CG + ++F + D W S
Sbjct: 468 LGKQ------VHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWAS 521
Query: 237 LISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKY 296
+IS + GY ++AI +F M+ G SP + VL CS + GK + L +
Sbjct: 522 MISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTL-RA 580
Query: 297 RIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 347
I GM+ + +V++ + L A ++ + +P E P SL+ H
Sbjct: 581 GIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP-ELDPVSCSSLISGYSQH 630
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 145/327 (44%), Gaps = 8/327 (2%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y GS+ A K+FD + + N EE L + +M++ G ++ +Y
Sbjct: 94 YSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISY 153
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
V+ AC + ++ + + + ++ GY V + L+DV++K A VFR
Sbjct: 154 GSVISACSALQAPLF----SELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFR 209
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
+ N W+ +I +N +LFH+M + P+S T SV
Sbjct: 210 DSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGF--QKPDSYTYSSVLAACASLEKL 267
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY 241
V +++ G + + V A++ +Y +CG ++ VF ++ NP VVSW ++S Y
Sbjct: 268 RFGKVVQARVIKCGAEDVF-VCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGY 326
Query: 242 GNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPG 301
+ A++IF+ M H GV + + +V+ AC +V E + + + K +
Sbjct: 327 TKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQV-HAWVFKSGFYLD 385
Query: 302 MEHYACMVDLLGRANRLDEAIKLIEDM 328
A ++ + ++ +D + ++ ED+
Sbjct: 386 SSVAAALISMYSKSGDIDLSEQVFEDL 412
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 187 VHGFILRRGLDSIMP----VINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYG 242
+ +LRR L +P + +L++ Y G ++ ++FD + PDVVS N +IS Y
Sbjct: 70 LQAHLLRRYL---LPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYK 126
Query: 243 NNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGM 302
+ +++++ F M G + IS+ +V+ ACS LF ++ + I G
Sbjct: 127 QHRLFEESLRFFSKMHFLGFEANEISYGSVISACSAL-----QAPLFSELVCCHTIKMGY 181
Query: 303 EHY----ACMVDLLGRANRLDEAIKLIED 327
Y + ++D+ + R ++A K+ D
Sbjct: 182 FFYEVVESALIDVFSKNLRFEDAYKVFRD 210
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 148/439 (33%), Positives = 223/439 (50%), Gaps = 38/439 (8%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y G ++ +R +FD R + +WN+ E L L+ +M + D T
Sbjct: 263 YANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR-NETREDSRTL 321
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAK------------ 109
V+ AC+ F L+ GK++H + + G ++I V +TLLD+Y+K
Sbjct: 322 AAVINACIGLGF----LETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFS 377
Query: 110 -----------------FGC--ISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALEL 150
F C I A VF + K+ +SW++M +++N V+ LE
Sbjct: 378 EVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEY 437
Query: 151 FHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMY 210
FHQM D + V++ SV V GLDS V ++LI +Y
Sbjct: 438 FHQM--HKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLY 495
Query: 211 GRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFI 270
+CG + G RVFD + D V WNS+IS Y NG G +AI +F+ M G+ P+ I+F+
Sbjct: 496 CKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFM 555
Query: 271 TVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPF 330
VL AC++ GLVEEG+ LFESM + P EH++CMVDLL RA ++EAI L+E+MPF
Sbjct: 556 VVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPF 615
Query: 331 EPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSV 390
+ ++W S+L C + + ++A+ + ELEP N+ YV L+ I+A + W V
Sbjct: 616 DVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALV 675
Query: 391 RKLMGKRVLQKVPGCSWIE 409
RKLM + + K PG SW +
Sbjct: 676 RKLMRENNVTKNPGSSWTD 694
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 115/262 (43%), Gaps = 46/262 (17%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y G +D A++VF+ +++ WN+ + G E LE + QM+ +P+D +
Sbjct: 393 VYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVS 452
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ V+ AC S+ L+ G+++ A G + + V ++L+D+Y K G + + VF
Sbjct: 453 LSSVISACA----SISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVF 508
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
M + V W++MI YA N +A++LF +M + P +T + V
Sbjct: 509 DTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIR--PTQITFMVV--------- 557
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK-----NPDVVSWN 235
+T CG + G ++F+ +K PD ++
Sbjct: 558 --------------------------LTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFS 591
Query: 236 SLISMYGNNGYGKKAIQIFENM 257
++ + GY ++AI + E M
Sbjct: 592 CMVDLLARAGYVEEAINLVEEM 613
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 126/317 (39%), Gaps = 80/317 (25%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY G + AR +FDE +R + WN ++E Y G S RF
Sbjct: 71 MYSRSGKMGIARNLFDEMPDRNYFSWNT-------------MIEGYMNSGEKG-TSLRF- 115
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
F + P R GY N+ ++ +AK G +S A +F
Sbjct: 116 ------------FDMMPE-----------RDGYSWNV-----VVSGFAKAGELSVARRLF 147
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
AMP K+ V+ ++++ Y N +AL LF ++ A +++T+ +V
Sbjct: 148 NAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSA-----DAITLTTVLKACAELEA 202
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPD---------- 230
+H IL G++ + ++L+ +Y +CG++ + + ++++ PD
Sbjct: 203 LKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISG 262
Query: 231 ---------------------VVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISF 269
V+ WNS+IS Y N +A+ +F M ++ S +
Sbjct: 263 YANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETREDSR-TL 321
Query: 270 ITVLCACSHAGLVEEGK 286
V+ AC G +E GK
Sbjct: 322 AAVINACIGLGFLETGK 338
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 82/159 (51%), Gaps = 10/159 (6%)
Query: 187 VHGFILRRG-LDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNG 245
+G +L++G L SI+ V N L+ MY R G++ I +FD++ + + SWN++I Y N+G
Sbjct: 48 TNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSG 107
Query: 246 YGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHY 305
+++ F+ M + S+ V+ + AG + + LF +M K + +
Sbjct: 108 EKGTSLRFFDMMPER----DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLH 163
Query: 306 ACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSC 344
+++ G A +EA++L +++ F ++L +C
Sbjct: 164 GYILN--GYA---EEALRLFKELNFSADAITLTTVLKAC 197
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 142/435 (32%), Positives = 228/435 (52%), Gaps = 11/435 (2%)
Query: 15 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWS-GIPSDRFTYTYVLKACVVSEF 73
F +R + + L + GR +E + L WS G+ + TY +L+ C +
Sbjct: 68 FQVENQRKTEKLDKTLKGLCVTGRLKEAVGLL----WSSGLQVEPETYAVLLQECKQRK- 122
Query: 74 SVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSA 133
KGK IHA + G+ N ++ LL +YA G + A +FR++ ++ + W+A
Sbjct: 123 ---EYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNA 179
Query: 134 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR 193
MI Y + + + L +++ M +P+ T SV H +++
Sbjct: 180 MISGYVQKGLEQEGLFIYYDMRQNRI--VPDQYTFASVFRACSALDRLEHGKRAHAVMIK 237
Query: 194 RGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQI 253
R + S + V +AL+ MY +C S G RVFD++ +V++W SLIS YG +G + ++
Sbjct: 238 RCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKC 297
Query: 254 FENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 313
FE M +G P+ ++F+ VL AC+H GLV++G F SM Y I P +HYA MVD LG
Sbjct: 298 FEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLG 357
Query: 314 RANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVL 373
RA RL EA + + P + P VWGSLLG+CRIH N +L E A+ EL+P N GNYV+
Sbjct: 358 RAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVV 417
Query: 374 LADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRAL 433
A+ YA + VR+ M ++K PG S IE++ +++ F+ + + EK+
Sbjct: 418 FANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKK 477
Query: 434 LIKLSTEMKEQGYAP 448
+ ++++ + Y P
Sbjct: 478 VHEMTSFFMDIDYYP 492
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 6/171 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y G L A +F + R + WNA G +E L +Y M + I D++T
Sbjct: 152 LYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYT 211
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ V +AC + L+ GK HA +++ + NI V + L+D+Y K S + VF
Sbjct: 212 FASVFRACSALD----RLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVF 267
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 171
+ +N ++W+++I Y + + L+ F +M E C PN VT + V
Sbjct: 268 DQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCR--PNPVTFLVV 316
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 242 bits (617), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 241/451 (53%), Gaps = 19/451 (4%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y + G L+ + VF + ER + W + ++ + ++ M + G+ + T+
Sbjct: 321 YSKCGVLEAVKSVFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVTF 375
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
++ A +E +++G +IH ++ G+ V + + +YAKF + A F
Sbjct: 376 VGLINAVKCNE----QIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFE 431
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX-- 179
+ + +SW+AMI +A+N +AL++F + A +++PN T SV
Sbjct: 432 DITFREIISWNAMISGFAQNGFSHEALKMF---LSAAAETMPNEYTFGSVLNAIAFAEDI 488
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
H +L+ GL+S V +AL+ MY + G I E+VF+++ + W S+IS
Sbjct: 489 SVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIIS 548
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
Y ++G + + +F MI + V+P ++F++VL AC+ G+V++G +F M+ Y +
Sbjct: 549 AYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLE 608
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAM 359
P EHY+CMVD+LGRA RL EA +L+ ++P PG ++ S+LGSCR+H N ++ + + +
Sbjct: 609 PSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAEL 668
Query: 360 LFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKK-----KI 414
E++P +G+YV + +IYAE + W +RK M K+ + K G SWI+V +
Sbjct: 669 AMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTM 728
Query: 415 YSFVSSEEDNPQIEKLRALLIKLSTEMKEQG 445
F S ++ +P+ +++ ++ + EM +G
Sbjct: 729 QGFSSGDKSHPKSDEIYRMVEIIGLEMNLEG 759
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 159/332 (47%), Gaps = 18/332 (5%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G D A +F+ + + WN L+ + L +M +G+ D FT
Sbjct: 120 MYRKAGRFDNALCIFENLVDPDVVSWNTI---LSGFDDNQIALNFVVRMKSAGVVFDAFT 176
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
Y+ L CV SE + LQ + + +++ G E ++ V + + +Y++ G A VF
Sbjct: 177 YSTALSFCVGSEGFLLGLQ----LQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVF 232
Query: 121 RAMPAKNSVSWSAMI-GCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
M K+ +SW++++ G + +A+ +F M+ E + + V+ SV
Sbjct: 233 DEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVE--LDHVSFTSVITTCCHET 290
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+HG ++RG +S++ V N L++ Y +CG + + VF ++ +VVSW ++IS
Sbjct: 291 DLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS 350
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEG-KILFESMLSKYRI 298
++ A+ IF NM GV P+ ++F+ ++ A ++EG KI + + +
Sbjct: 351 SNKDD-----AVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVS 405
Query: 299 HPGMEHYACMVDLLGRANRLDEAIKLIEDMPF 330
P + + + L + L++A K ED+ F
Sbjct: 406 EPSVGN--SFITLYAKFEALEDAKKAFEDITF 435
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 126/273 (46%), Gaps = 16/273 (5%)
Query: 11 ARKVFDETRER--TIYIWNAFFRAL--AMVGRGEELLELYRQMNWSGIPSDRFTYTYVLK 66
A K+FD + +R T I ++ +L R + + Q+ + G D T LK
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 67 ACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK 126
AC L++G +IH G+ + V ++ +Y K G A +F +
Sbjct: 87 ACR------GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDP 140
Query: 127 NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXX 186
+ VSW+ ++ + N + AL +M ++ + ++ T +
Sbjct: 141 DVVSWNTILSGFDDNQI---ALNFVVRM--KSAGVVFDAFTYSTALSFCVGSEGFLLGLQ 195
Query: 187 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNG- 245
+ +++ GL+S + V N+ ITMY R G RVFD++ D++SWNSL+S G
Sbjct: 196 LQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGT 255
Query: 246 YGKKAIQIFENMIHQGVSPSYISFITVLCACSH 278
+G +A+ IF +M+ +GV ++SF +V+ C H
Sbjct: 256 FGFEAVVIFRDMMREGVELDHVSFTSVITTCCH 288
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 126/277 (45%), Gaps = 11/277 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y + +L+ A+K F++ R I WNA A G E L+++ +P++ +T
Sbjct: 416 LYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNE-YT 474
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ VL A +E +++G+ HA++L+ G V + LLD+YAK G I + VF
Sbjct: 475 FGSVLNAIAFAE--DISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVF 532
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
M KN W+++I Y+ + + LFH+M+ E + P+ VT +SV
Sbjct: 533 NEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKE--NVAPDLVTFLSVLTACNRKGM 590
Query: 181 XXXXXXVHGFILR-RGLDSIMPVINALITMYGRCGEISIGERVFDKVK-NPDVVSWNSLI 238
+ ++ L+ + ++ M GR G + E + +V P S++
Sbjct: 591 VDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSML 650
Query: 239 S---MYGNNGYGKKAIQIFENMIHQGVSPSYISFITV 272
++GN G K ++ M + +S SY+ +
Sbjct: 651 GSCRLHGNVKMGAKVAELAMEMKPE-LSGSYVQMYNI 686
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 242 bits (617), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 146/510 (28%), Positives = 248/510 (48%), Gaps = 71/510 (13%)
Query: 8 LDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA 67
LD A + +E ++++NA F+ LELY +M + +TY+ ++KA
Sbjct: 821 LDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKA 880
Query: 68 CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKN 127
S + + G+ + A+I + G+ ++ + TTL+D Y+ G I A VF MP ++
Sbjct: 881 ------SSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERD 934
Query: 128 SVSWSAMIGCYAK------------------------------------------NDMPV 145
++W+ M+ Y + N MPV
Sbjct: 935 DIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPV 994
Query: 146 K--------------------ALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXX 185
K A+ +F++M+ E IP+ VTM +V
Sbjct: 995 KDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGI--IPDEVTMSTVISACAHLGVLEIGK 1052
Query: 186 XVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNG 245
VH + L+ G + + +AL+ MY +CG + VF + ++ WNS+I +G
Sbjct: 1053 EVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHG 1112
Query: 246 YGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHY 305
+ ++A+++F M + V P+ ++F++V AC+HAGLV+EG+ ++ SM+ Y I +EHY
Sbjct: 1113 FAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHY 1172
Query: 306 ACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEP 365
MV L +A + EA++LI +M FEP +WG+LL CRIH N +AE A L LEP
Sbjct: 1173 GGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEP 1232
Query: 366 WNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKV-PGCSWIEVKKKIYSFVSSEEDN 424
N+G Y LL +YAE W DV +R M + ++K+ PG S I + K+ + F ++++ +
Sbjct: 1233 MNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSH 1292
Query: 425 PQIEKLRALLIKLSTEMKEQGYAPQTNIVH 454
+++ LL ++ +M GY +T V+
Sbjct: 1293 SASDEVCLLLDEIYDQMGLAGYVQETENVY 1322
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 92/170 (54%), Gaps = 6/170 (3%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y LG+L+ A +F++ + I W + + R E + ++ +M GI D T
Sbjct: 976 YMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTM 1035
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
+ V+ AC + L+ GKE+H L++G+ ++++ + L+D+Y+K G + A VF
Sbjct: 1036 STVISACA----HLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFF 1091
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 171
+P KN W+++I A + +AL++F +M +E+ PN+VT VSV
Sbjct: 1092 NLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVK--PNAVTFVSV 1139
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 7/164 (4%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + GSL+ A VF ++ ++ WN+ LA G +E L+++ +M + + T
Sbjct: 1076 MYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVT 1135
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANIL-RHGYEENIHVMTTLLDVYAKFGCISYANSV 119
+ V AC + + +G+ I+ +++ + N+ ++ +++K G I A +
Sbjct: 1136 FVSVFTACTHAGL----VDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALEL 1191
Query: 120 FRAMP-AKNSVSWSAMI-GCYAKNDMPVKALELFHQMVLEACDS 161
M N+V W A++ GC ++ + + MVLE +S
Sbjct: 1192 IGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNS 1235
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 241 bits (616), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 145/449 (32%), Positives = 232/449 (51%), Gaps = 13/449 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G + ARK+FDE ER WN+ + G ++ ++L+R+M G D T
Sbjct: 176 MYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERT 235
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+L AC + L+ G+ + + + + + L+ +Y K G + A VF
Sbjct: 236 LVSMLGACS----HLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVF 291
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
M K+ V+W+AMI Y++N +A +LF +M E P++ T+ +V
Sbjct: 292 NQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM--EKTGVSPDAGTLSTVLSACGSVGA 349
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+ L + V L+ MYG+CG + RVF+ + + +WN++I+
Sbjct: 350 LELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITA 409
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
Y + G+ K+A+ +F+ M V PS I+FI VL AC HAGLV +G F M S + + P
Sbjct: 410 YAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVP 466
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
+EHY ++DLL RA LDEA + +E P +P + ++LG+C + + E+A ML
Sbjct: 467 KIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRML 526
Query: 361 FEL-EPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVS 419
E+ E NAGNYV+ +++ A+ KMW + +R LM R + K PGCSWIE++ ++ F++
Sbjct: 527 MEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLA 586
Query: 420 SEEDNPQI--EKLRALLIKLSTEMKEQGY 446
D Q E +L L EMK + Y
Sbjct: 587 G-SDYLQCGREDSGSLFDLLVEEMKRERY 614
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 179/339 (52%), Gaps = 9/339 (2%)
Query: 4 ELGSLDCARKVFDETRERTIYIWNAFFRALAMV-GRGEELLELYRQMNWSGIPSDRFTYT 62
ELG + + +F T E Y +N R L E L LYR+M +SG+ D+FTY
Sbjct: 77 ELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYN 136
Query: 63 YVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRA 122
+V AC E + G+ +H+++ + G E ++H+ +L+ +YAK G + YA +F
Sbjct: 137 FVFIACAKLE----EIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDE 192
Query: 123 MPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXX 182
+ +++VSW++MI Y++ A++LF +M E + P+ T+VS+
Sbjct: 193 ITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFE--PDERTLVSMLGACSHLGDLR 250
Query: 183 XXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYG 242
+ + + + + + LI+MYG+CG++ RVF+++ D V+W ++I++Y
Sbjct: 251 TGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYS 310
Query: 243 NNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGM 302
NG +A ++F M GVSP + TVL AC G +E GK + E+ S+ + +
Sbjct: 311 QNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQI-ETHASELSLQHNI 369
Query: 303 EHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 341
+VD+ G+ R++EA+++ E MP + T W +++
Sbjct: 370 YVATGLVDMYGKCGRVEEALRVFEAMPVKNEAT-WNAMI 407
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 141/306 (46%), Gaps = 21/306 (6%)
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ ++LK C+ SV L ++I A +L H E+ L+ + G +Y++ +F
Sbjct: 40 FLFLLKKCI----SVNQL---RQIQAQMLLHSVEKP----NFLIPKAVELGDFNYSSFLF 88
Query: 121 RAMPAKNSVSWSAMIGCYAK--NDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
N S++ MI ND AL L+ +M P+ T V
Sbjct: 89 SVTEEPNHYSFNYMIRGLTNTWNDHEA-ALSLYRRMKFSGLK--PDKFTYNFVFIACAKL 145
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
VH + + GL+ + + ++LI MY +CG++ ++FD++ D VSWNS+I
Sbjct: 146 EEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMI 205
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 298
S Y GY K A+ +F M +G P + +++L ACSH G + G++L E ++K +I
Sbjct: 206 SGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITK-KI 264
Query: 299 HPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASA 358
+ ++ + G+ LD A ++ M + W +++ ++ + A
Sbjct: 265 GLSTFLGSKLISMYGKCGDLDSARRVFNQM-IKKDRVAWTAMI---TVYSQNGKSSEAFK 320
Query: 359 MLFELE 364
+ FE+E
Sbjct: 321 LFFEME 326
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 241 bits (616), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 143/437 (32%), Positives = 227/437 (51%), Gaps = 39/437 (8%)
Query: 5 LGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYV 64
L + D A +VF + + ++NA + ++VG E L + M GI +D +TY +
Sbjct: 49 LSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPL 108
Query: 65 LKACVVSEFSVYPLQKGKEIHANILRHGY------------------------------- 93
LK+C S+ L+ GK +H ++R G+
Sbjct: 109 LKSCS----SLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMS 164
Query: 94 EENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQ 153
E N+ V ++ + G + +F+ M ++ VSW++MI +K +ALELF +
Sbjct: 165 ERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCE 224
Query: 154 MVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGL-DSIMPVINALITMYGR 212
M+ + D P+ T+V+V +H GL + V NAL+ Y +
Sbjct: 225 MIDQGFD--PDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCK 282
Query: 213 CGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG-VSPSYISFIT 271
G++ +F K++ +VVSWN+LIS NG G+ I +F+ MI +G V+P+ +F+
Sbjct: 283 SGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLG 342
Query: 272 VLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFE 331
VL CS+ G VE G+ LF M+ ++++ EHY MVDL+ R+ R+ EA K +++MP
Sbjct: 343 VLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVN 402
Query: 332 PGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVR 391
+WGSLL +CR H + +LAE A+ L ++EP N+GNYVLL+++YAE W DV+ VR
Sbjct: 403 ANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVR 462
Query: 392 KLMGKRVLQKVPGCSWI 408
LM K L+K G S I
Sbjct: 463 TLMKKNRLRKSTGQSTI 479
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 120/302 (39%), Gaps = 34/302 (11%)
Query: 83 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKND 142
EIHA++LRH + ++ + + YAN VF + N + ++AMI CY+
Sbjct: 22 EIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVG 81
Query: 143 MPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPV 202
P+++L F M ++ + T + VHG ++R G + +
Sbjct: 82 PPLESLSFFSSM--KSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKI 139
Query: 203 INALITMYGRCGEISIGERVFDKVKNPDV------------------------------- 231
++ +Y G + ++VFD++ +V
Sbjct: 140 RIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSI 199
Query: 232 VSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFES 291
VSWNS+IS G ++A+++F MI QG P + +TVL + G+++ GK + +
Sbjct: 200 VSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHST 259
Query: 292 MLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAE 351
S + +VD ++ L+ A + M W +L+ ++ E
Sbjct: 260 AESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQ-RRNVVSWNTLISGSAVNGKGE 318
Query: 352 LA 353
Sbjct: 319 FG 320
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 134/428 (31%), Positives = 228/428 (53%), Gaps = 12/428 (2%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 70
AR + + + T WN R + E + +Y +M GI ++ T+ ++LKAC
Sbjct: 66 ARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACA- 124
Query: 71 SEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVS 130
S L G++I +L+HG++ +++V L+ +Y S A VF M +N VS
Sbjct: 125 ---SFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVS 181
Query: 131 WSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGF 190
W++++ +N E F +M+ + P+ TMV + VH
Sbjct: 182 WNSIMTALVENGKLNLVFECFCEMIGKRF--CPDETTMVVLLSACGGNLSLGKL--VHSQ 237
Query: 191 ILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKA 250
++ R L+ + AL+ MY + G + VF+++ + +V +W+++I G+ ++A
Sbjct: 238 VMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEA 297
Query: 251 IQIFENMIHQG-VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMV 309
+Q+F M+ + V P+Y++F+ VLCACSH GLV++G F M ++I P M HY MV
Sbjct: 298 LQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMV 357
Query: 310 DLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAE---LAERASAMLFELEPW 366
D+LGRA RL+EA I+ MPFEP VW +LL +C IH + + + E+ L ELEP
Sbjct: 358 DILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPK 417
Query: 367 NAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQ 426
+GN V++A+ +AEA+MW++ VR++M + ++K+ G S +E+ + F S + +
Sbjct: 418 RSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSE 477
Query: 427 IEKLRALL 434
+ LL
Sbjct: 478 YVSIYELL 485
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 110/248 (44%), Gaps = 7/248 (2%)
Query: 83 EIHANILRHGYEENIHVMTTLLDV--YAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAK 140
+IH I + + +++ L+ V + +++A ++ +W+ + Y+
Sbjct: 31 QIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSS 90
Query: 141 NDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIM 200
+D PV+++ ++ +M PN +T + + +L+ G D +
Sbjct: 91 SDSPVESIWVYSEMKRRGIK--PNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDV 148
Query: 201 PVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQ 260
V N LI +YG C + S +VFD++ +VVSWNS+++ NG + F MI +
Sbjct: 149 YVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGK 208
Query: 261 GVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDE 320
P + + +L AC G + GK++ ++ + + +VD+ ++ L+
Sbjct: 209 RFCPDETTMVVLLSAC--GGNLSLGKLVHSQVMVR-ELELNCRLGTALVDMYAKSGGLEY 265
Query: 321 AIKLIEDM 328
A + E M
Sbjct: 266 ARLVFERM 273
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 145/444 (32%), Positives = 233/444 (52%), Gaps = 9/444 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y E G L V +R I WN+ A G + L L+RQM I D FT
Sbjct: 348 LYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFT 407
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ AC + PL GK+IH +++R + V +L+D+Y+K G + A++VF
Sbjct: 408 LASSISAC--ENAGLVPL--GKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTVF 462
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+ ++ V+W++M+ +++N V+A+ LF M + N VT ++V
Sbjct: 463 NQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEM--NEVTFLAVIQACSSIGS 520
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
VH ++ GL + ALI MY +CG+++ E VF + + +VSW+S+I+
Sbjct: 521 LEKGKWVHHKLIISGLKDLF-TDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINA 579
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
YG +G AI F M+ G P+ + F+ VL AC H+G VEEGK F +++ + + P
Sbjct: 580 YGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYF-NLMKSFGVSP 638
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
EH+AC +DLL R+ L EA + I++MPF +VWGSL+ CRIH ++ + L
Sbjct: 639 NSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDL 698
Query: 361 FELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 420
++ + G Y LL++IYAE W + + +R M L+KVPG S IE+ +K++ F +
Sbjct: 699 SDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAG 758
Query: 421 EEDNPQIEKLRALLIKLSTEMKEQ 444
EE+ Q +++ L L E+
Sbjct: 759 EENRIQTDEIYRFLGNLQNLTNEE 782
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 171/344 (49%), Gaps = 14/344 (4%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y +GS D +R VF+ +++ + + ++LY ++ +F +
Sbjct: 44 YAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVF 103
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
VL+AC S L G ++H I++ G +++ + T+LL +Y + G +S A VF
Sbjct: 104 PSVLRACAGSR---EHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFD 160
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
MP ++ V+WS ++ +N VKAL +F MV + + P++VTM+SV
Sbjct: 161 GMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVE--PDAVTMISVVEGCAELGCL 218
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY 241
VHG I R+ D + N+L+TMY +CG++ ER+F+K+ + VSW ++IS Y
Sbjct: 219 RIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSY 278
Query: 242 GNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPG 301
+ +KA++ F MI G+ P+ ++ +VL +C GL+ EGK + + + P
Sbjct: 279 NRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSV-HGFAVRRELDPN 337
Query: 302 MEHYA-CMVDLLGRANRLDE---AIKLIEDMPFEPGPTVWGSLL 341
E + +V+L +L + ++++ D W SL+
Sbjct: 338 YESLSLALVELYAECGKLSDCETVLRVVSDRNI----VAWNSLI 377
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 167/342 (48%), Gaps = 10/342 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G+L A KVFD R + W+ + G + L +++ M G+ D T
Sbjct: 145 MYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVT 204
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
V++ C + L+ + +H I R ++ + + +LL +Y+K G + + +F
Sbjct: 205 MISVVEGCA----ELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIF 260
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+ KN+VSW+AMI Y + + KAL F +M+ + PN VT+ SV
Sbjct: 261 EKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIE--PNLVTLYSVLSSCGLIGL 318
Query: 181 XXXXXXVHGFILRRGLDSIMPVIN-ALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
VHGF +RR LD ++ AL+ +Y CG++S E V V + ++V+WNSLIS
Sbjct: 319 IREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLIS 378
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
+Y + G +A+ +F M+ Q + P + + + AC +AGLV GK + ++
Sbjct: 379 LYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSD 438
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 341
+++ ++D+ ++ +D A + + T W S+L
Sbjct: 439 EFVQN--SLIDMYSKSGSVDSASTVFNQIKHRSVVT-WNSML 477
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 160/362 (44%), Gaps = 41/362 (11%)
Query: 74 SVYPLQKGKEIHANILRHG-YEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWS 132
S L+ ++HA++L G + +T L++ YA G + VF A P +S +
Sbjct: 10 SCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYG 69
Query: 133 AMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFIL 192
+I C + A++L+H++V E I V + VHG I+
Sbjct: 70 VLIKCNVWCHLLDAAIDLYHRLVSETTQ-ISKFVFPSVLRACAGSREHLSVGGKVHGRII 128
Query: 193 RRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQ 252
+ G+D + +L+ MYG+ G +S E+VFD + D+V+W++L+S NG KA++
Sbjct: 129 KGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALR 188
Query: 253 IFENMIHQGVSPSYISFITVLCACSHAGLVE-----EGKI---LFE-------------- 290
+F+ M+ GV P ++ I+V+ C+ G + G+I +F+
Sbjct: 189 MFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYS 248
Query: 291 ---SMLSKYRIHPGMEH-----YACMVDLLGRANRLDEAIKLIEDM---PFEPGPTVWGS 339
+LS RI + + M+ R ++A++ +M EP S
Sbjct: 249 KCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYS 308
Query: 340 LLGSCRIHCNAELAERASAMLF----ELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMG 395
+L SC + + E S F EL+P + L ++YAE SD ++V +++
Sbjct: 309 VLSSCGLI--GLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVS 366
Query: 396 KR 397
R
Sbjct: 367 DR 368
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 238 bits (608), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 234/452 (51%), Gaps = 6/452 (1%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y + G R VFD R + A L E+ L L+ M + + TY
Sbjct: 200 YFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTY 259
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
L AC S+ V +G++IHA + ++G E + + + L+D+Y+K G I A ++F
Sbjct: 260 LSALAACSGSQRIV----EGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFE 315
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
+ + VS + ++ A+N +A++ F +M+ + N V+ +V
Sbjct: 316 STTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVS--AVLGVSFIDNSL 373
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY 241
+H +++R V N LI MY +CG+++ + VF ++ + VSWNS+I+ +
Sbjct: 374 GLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAF 433
Query: 242 GNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPG 301
+G+G A++++E M V P+ ++F+++L ACSH GL+++G+ L M + I P
Sbjct: 434 ARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPR 493
Query: 302 MEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLF 361
EHY C++D+LGRA L EA I+ +P +P +W +LLG+C H + E+ E A+ LF
Sbjct: 494 TEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLF 553
Query: 362 ELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSE 421
+ P ++ ++L+A+IY+ W + K M + K G S IE++ K +SFV +
Sbjct: 554 QTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVED 613
Query: 422 EDNPQIEKLRALLIKLSTEMKEQGYAPQTNIV 453
+ +PQ E + +L L M ++GY P +
Sbjct: 614 KLHPQAEAIYDVLSGLFPVMVDEGYRPDKRFI 645
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 24/268 (8%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + GS++ A +F+ T E LA G EE ++ + +M +G+ D
Sbjct: 300 MYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANV 359
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ VL + L GK++H+ +++ + N V L+++Y+K G ++ + +VF
Sbjct: 360 VSAVLGVSFIDN----SLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVF 415
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVS-------VXX 173
R MP +N VSW++MI +A++ + AL+L+ +M + P VT +S V
Sbjct: 416 RRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMT--TLEVKPTDVTFLSLLHACSHVGL 473
Query: 174 XXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK-NPDVV 232
VHG R +I M GR G + + D + PD
Sbjct: 474 IDKGRELLNEMKEVHGIEPR------TEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCK 527
Query: 233 SWNSLI---SMYGNNGYGKKAI-QIFEN 256
W +L+ S +G+ G+ A Q+F+
Sbjct: 528 IWQALLGACSFHGDTEVGEYAAEQLFQT 555
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 118/256 (46%), Gaps = 14/256 (5%)
Query: 81 GKEIHANILRHG-----YEENIH-----VMTTLLDVYAKFGCISYANSVFRAMPAKNSVS 130
G +HA+I+++ + +IH V +LL +YAK G + A +F MP ++ +S
Sbjct: 64 GPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVIS 123
Query: 131 WSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGF 190
+ + + +N L +M+ + T+ V +H
Sbjct: 124 QNIVFYGFLRNRETESGFVLLKRMLGSGG---FDHATLTIVLSVCDTPEFCLVTKMIHAL 180
Query: 191 ILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKA 250
+ G D + V N LIT Y +CG G VFD + + +V++ ++IS N +
Sbjct: 181 AILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDG 240
Query: 251 IQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVD 310
+++F M V P+ +++++ L ACS + + EG+ + ++L KY I + + ++D
Sbjct: 241 LRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQI-HALLWKYGIESELCIESALMD 299
Query: 311 LLGRANRLDEAIKLIE 326
+ + +++A + E
Sbjct: 300 MYSKCGSIEDAWTIFE 315
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 238 bits (606), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 146/473 (30%), Positives = 238/473 (50%), Gaps = 47/473 (9%)
Query: 5 LGSLDCARKVFDETRERTIYIWNAFFRALA--MVGRGEELLELYRQMNWSGIP-SDRFTY 61
L +L AR +FD +++ A A + + +R M +P + F Y
Sbjct: 70 LCNLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIY 129
Query: 62 TYVLKAC--VVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAK-FGCISYANS 118
VLK+ + S FS PL +H ++ + G+ + V T LL YA I+ A
Sbjct: 130 PLVLKSTPYLSSAFST-PL-----VHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQ 183
Query: 119 VFRAMPAKNSVSWSAMIGCYAKN-----------DMP--------------------VKA 147
+F M +N VSW+AM+ YA++ DMP ++A
Sbjct: 184 LFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEA 243
Query: 148 LELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALI 207
+ LF +M+ E PN VT+V V +H F RR L S + V N+L+
Sbjct: 244 VSLFRRMINEPSIR-PNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLV 302
Query: 208 TMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIH---QGVSP 264
+YG+CG + VF + +WNS+I+ + +G ++AI +FE M+ + P
Sbjct: 303 DLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKP 362
Query: 265 SYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKL 324
+I+FI +L AC+H GLV +G+ F+ M +++ I P +EHY C++DLLGRA R DEA+++
Sbjct: 363 DHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEV 422
Query: 325 IEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMW 384
+ M + +WGSLL +C+IH + +LAE A L L P N G ++A++Y E W
Sbjct: 423 MSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNW 482
Query: 385 SDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKL 437
+ + RK++ + K PG S IE+ +++ F S ++ +P+ E++ +L L
Sbjct: 483 EEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 8/261 (3%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM-NWSGIPSDRFT 60
Y G + A +F++ ER + WNA A G E + L+R+M N I + T
Sbjct: 203 YARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVT 262
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
VL AC + LQ K IHA R ++ V +L+D+Y K G + A+SVF
Sbjct: 263 VVCVLSACAQTG----TLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVF 318
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMV-LEACDSIPNSVTMVSVXXXXXXXX 179
+ K+ +W++MI C+A + +A+ +F +M+ L D P+ +T + +
Sbjct: 319 KMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGG 378
Query: 180 XXXXXXXVHGFILRR-GLDSIMPVINALITMYGRCGEISIGERVFDKVK-NPDVVSWNSL 237
+ R G++ + LI + GR G V +K D W SL
Sbjct: 379 LVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSL 438
Query: 238 ISMYGNNGYGKKAIQIFENMI 258
++ +G+ A +N++
Sbjct: 439 LNACKIHGHLDLAEVAVKNLV 459
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 139/445 (31%), Positives = 230/445 (51%), Gaps = 7/445 (1%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G + + +V + + + W L +GR E+ L ++ +M SG
Sbjct: 289 MYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEA 348
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
V+ +C ++ + L G +H +LRHGY + + +L+ +YAK G + + +F
Sbjct: 349 IASVVASC--AQLGSFDL--GASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIF 404
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
M ++ VSW+A+I YA+N KAL LF +M + + +S T+VS+
Sbjct: 405 ERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQV-DSFTVVSLLQACSSAGA 463
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+H ++R + V AL+ MY +CG + +R FD + DVVSW LI+
Sbjct: 464 LPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAG 523
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
YG +G G A++I+ +H G+ P+++ F+ VL +CSH G+V++G +F SM+ + + P
Sbjct: 524 YGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEP 583
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
EH AC+VDLL RA R+++A K ++ P V G +L +CR + E+ + +
Sbjct: 584 NHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDM 643
Query: 361 FELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 420
EL+P +AG+YV L +A K W DV M L+K+PG S IE+ K +F +
Sbjct: 644 IELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMN 703
Query: 421 EEDNPQIEKLRALLIKLSTEMKEQG 445
+ + +LL LS EM + G
Sbjct: 704 HTSHS--DDTVSLLKLLSREMMQFG 726
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 153/304 (50%), Gaps = 10/304 (3%)
Query: 26 WNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIH 85
+N+ L+ G +++L + M + + D FT+ +LKAC S+ L G IH
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACA----SLQRLSFGLSIH 69
Query: 86 ANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPV 145
+L +G+ + ++ ++L+++YAKFG +++A VF M ++ V W+AMIGCY++ +
Sbjct: 70 QQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVG 129
Query: 146 KALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINA 205
+A L ++M + P VT++ + +H F + G D + V+N+
Sbjct: 130 EACSLVNEMRFQGIK--PGPVTLLEM---LSGVLEITQLQCLHDFAVIYGFDCDIAVMNS 184
Query: 206 LITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPS 265
++ +Y +C + + +FD+++ D+VSWN++IS Y + G + +++ M G+ P
Sbjct: 185 MLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPD 244
Query: 266 YISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLI 325
+F L +E G++L + K M ++ + + + + + +++
Sbjct: 245 QQTFGASLSVSGTMCDLEMGRML-HCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVL 303
Query: 326 EDMP 329
E +P
Sbjct: 304 ETIP 307
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 150/330 (45%), Gaps = 14/330 (4%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y + G L ARKVF+E RER + W A + G E L +M + GI T
Sbjct: 90 LYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVT 149
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+L V + + + +H + +G++ +I VM ++L++Y K + A +F
Sbjct: 150 LLEMLSG-------VLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLF 202
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
M ++ VSW+ MI YA + L+L ++M + P+ T +
Sbjct: 203 DQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLR--PDQQTFGASLSVSGTMCD 260
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+H I++ G D M + ALITMY +CG+ RV + + N DVV W +IS
Sbjct: 261 LEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISG 320
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSK-YRIH 299
G +KA+ +F M+ G S + +V+ +C+ G + G + +L Y +
Sbjct: 321 LMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLD 380
Query: 300 -PGMEHYACMVDLLGRANRLDEAIKLIEDM 328
P + ++ + + LD+++ + E M
Sbjct: 381 TPALNS---LITMYAKCGHLDKSLVIFERM 407
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/412 (32%), Positives = 220/412 (53%), Gaps = 22/412 (5%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G A K F+ + +NA + +G + ++Y+ M G+ D T
Sbjct: 445 MYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRT 504
Query: 61 YTYVLKACV-VSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
+L+ C S+++ +G ++ I++HG++ HV L++++ K ++ A +
Sbjct: 505 MVGMLQTCAFCSDYA-----RGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVL 559
Query: 120 F-RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
F + K++VSW+ M+ Y + +A+ F QM +E PN+VT V++
Sbjct: 560 FDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQ--PNAVTFVNIVRAAAEL 617
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
VH +++ G S PV N+L+ MY +CG I E+ F ++ N +VSWN+++
Sbjct: 618 SALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTML 677
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 298
S Y +G A+ +F +M + P +SF++VL AC HAGLVEEGK +FE M +++I
Sbjct: 678 SAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKI 737
Query: 299 HPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASA 358
+EHYACMVDLLG+A EA++++ M + VWG+LL S R+HCN L+ A
Sbjct: 738 EAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALC 797
Query: 359 MLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEV 410
L +LEP N + Y++ + +V +V + ++KVP CSWIEV
Sbjct: 798 QLVKLEPLNPSH-------YSQDRRLGEVNNVSR------IKKVPACSWIEV 836
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 181/404 (44%), Gaps = 56/404 (13%)
Query: 9 DCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNW-SGIPSDRFTYTYVLKA 67
D +R +FD R+ + +WN+ R G E L + M+ GI D++++T+ LKA
Sbjct: 50 DLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKA 109
Query: 68 CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKN 127
C S +KG IH I G E ++++ T L+++Y K + A VF M K+
Sbjct: 110 CAGS----MDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKD 165
Query: 128 SVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXV 187
V+W+ M+ A+N AL LFH M +C + V++ ++ +
Sbjct: 166 VVTWNTMVSGLAQNGCSSAALLLFHDM--RSCCVDIDHVSLYNLIPAVSKLEKSDVCRCL 223
Query: 188 HGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYG 247
HG ++++G I + LI MY C ++ E VF++V D SW ++++ Y +NG+
Sbjct: 224 HGLVIKKGF--IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFF 281
Query: 248 KKAIQIFENMIHQGVSPSYISFITVLCACSHAG-----------LVEEGKI----LFESM 292
++ +++F+ M + V + ++ + L A ++ G V++G I + S+
Sbjct: 282 EEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSL 341
Query: 293 LSKYRIHPGME---------------HYACMVDLLGRANRLDEAIKLIEDM---PFEPGP 334
+S Y +E ++ M+ +A + DEAI L DM +P
Sbjct: 342 MSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNA 401
Query: 335 TVWGSLLGSC----------RIHCNAELAERASAMLFELEPWNA 368
S+L C IHC A A+ S ELE A
Sbjct: 402 VTLTSVLQGCAGVAASRLGKSIHCYAIKADIES----ELETATA 441
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 155/353 (43%), Gaps = 7/353 (1%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY L A VF+E + W A A G EE+LEL+ M + ++
Sbjct: 243 MYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVA 302
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ + V L KG IH ++ G ++ V T+L+ +Y+K G + A +F
Sbjct: 303 AASA----LQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLF 358
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+ ++ VSWSAMI Y + +A+ LF M+ PN+VT+ SV
Sbjct: 359 INIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIK--PNAVTLTSVLQGCAGVAA 416
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+H + ++ ++S + A+I+MY +CG S + F+++ D V++N+L
Sbjct: 417 SRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQG 476
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
Y G KA +++NM GV P + + +L C+ G ++ ++ K+
Sbjct: 477 YTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQII-KHGFDS 535
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 353
++++ + + L AI L + FE W ++ +H AE A
Sbjct: 536 ECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEA 588
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 152/335 (45%), Gaps = 17/335 (5%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + L AR+VFD+ + + WN LA G L L+ M + D +
Sbjct: 144 MYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVS 203
Query: 61 YTYVLKACVVSEFSVYPLQKG---KEIHANILRHGYEENIHVMTT-LLDVYAKFGCISYA 116
++ A V L+K + +H +++ G+ I ++ L+D+Y + A
Sbjct: 204 LYNLIPA-------VSKLEKSDVCRCLHGLVIKKGF---IFAFSSGLIDMYCNCADLYAA 253
Query: 117 NSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXX 176
SVF + K+ SW M+ YA N + LELF M D N V S
Sbjct: 254 ESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLM--RNYDVRMNKVAAASALQAAA 311
Query: 177 XXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNS 236
+H + +++GL + V +L++MY +CGE+ I E++F +++ DVVSW++
Sbjct: 312 YVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSA 371
Query: 237 LISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKY 296
+I+ Y G +AI +F +M+ + P+ ++ +VL C+ GK + + K
Sbjct: 372 MIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAI-KA 430
Query: 297 RIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFE 331
I +E ++ + + R A+K E +P +
Sbjct: 431 DIESELETATAVISMYAKCGRFSPALKAFERLPIK 465
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 94/217 (43%), Gaps = 16/217 (7%)
Query: 83 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKND 142
++H +++ G + + L++ Y+ F + +F ++ V W++MI Y +
Sbjct: 23 QVHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAG 78
Query: 143 MPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPV 202
+ +AL F M E P+ + +H I GL+S + +
Sbjct: 79 LHREALGFFGYMSEEKGID-PDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYI 137
Query: 203 INALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGV 262
AL+ MY + ++ +VFDK+ DVV+WN+++S NG A+ +F +M V
Sbjct: 138 GTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCV 197
Query: 263 SPSYISFITVL-----------CACSHAGLVEEGKIL 288
++S ++ C C H ++++G I
Sbjct: 198 DIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIF 234
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/419 (31%), Positives = 224/419 (53%), Gaps = 15/419 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY G ++ +VF++ + + W + R + +E +R+M +G+ ++
Sbjct: 151 MYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETI 210
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEE--------NIHVMTTLLDVYAKFGC 112
+L AC + + GK H + G++ N+ + T+L+D+YAK G
Sbjct: 211 MVDLLVACGRCK----DIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGD 266
Query: 113 ISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVX 172
+ A +F MP + VSW+++I Y++N +AL +F M+ P+ VT +SV
Sbjct: 267 LRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDML--DLGIAPDKVTFLSVI 324
Query: 173 XXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVV 232
+H ++ + G ++ AL+ MY + G+ ++ F+ ++ D +
Sbjct: 325 RASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTI 384
Query: 233 SWNSLISMYGNNGYGKKAIQIFENMIHQG-VSPSYISFITVLCACSHAGLVEEGKILFES 291
+W +I ++G+G +A+ IF+ M +G +P I+++ VL ACSH GLVEEG+ F
Sbjct: 385 AWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAE 444
Query: 292 MLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAE 351
M + + P +EHY CMVD+L RA R +EA +L++ MP +P +WG+LL C IH N E
Sbjct: 445 MRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLE 504
Query: 352 LAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEV 410
L +R +M+ E E +G YVLL++IYA+A W+DVK +R+ M + + KV G S +E
Sbjct: 505 LTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVET 563
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 159/333 (47%), Gaps = 15/333 (4%)
Query: 4 ELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTY 63
E +L AR VF+ ++YIWN+ R + ++ L Y++M G D FT+ Y
Sbjct: 53 ETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPY 112
Query: 64 VLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAM 123
VLKAC + +Q G +H +++ G+E N++V T LL +Y G ++Y VF +
Sbjct: 113 VLKACS----GLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDI 168
Query: 124 PAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXX 183
P N V+W ++I + N+ A+E F +M + N MV +
Sbjct: 169 PQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKA--NETIMVDLLVACGRCKDIVT 226
Query: 184 XXXVHGFILRRGLDSIMP--------VINALITMYGRCGEISIGERVFDKVKNPDVVSWN 235
HGF+ G D + +LI MY +CG++ +FD + +VSWN
Sbjct: 227 GKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWN 286
Query: 236 SLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSK 295
S+I+ Y NG ++A+ +F +M+ G++P ++F++V+ A G + G+ + + +SK
Sbjct: 287 SIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSI-HAYVSK 345
Query: 296 YRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 328
+V++ + + A K ED+
Sbjct: 346 TGFVKDAAIVCALVNMYAKTGDAESAKKAFEDL 378
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 124/285 (43%), Gaps = 19/285 (6%)
Query: 82 KEIHANILRHGYEENIHVMTTLLDVYAKFGC-----ISYANSVFRAMPAKNSVSWSAMIG 136
++H +++ N+ ++ L+D C +SYA SVF ++ + W++MI
Sbjct: 23 NQLHGLMIKSSVIRNVIPLSRLIDFCTT--CPETMNLSYARSVFESIDCPSVYIWNSMIR 80
Query: 137 CYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGL 196
Y+ + P KAL + +M+ + P+ T V VHGF+++ G
Sbjct: 81 GYSNSPNPDKALIFYQEMLRKGYS--PDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGF 138
Query: 197 DSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFEN 256
+ M V L+ MY CGE++ G RVF+ + +VV+W SLIS + NN AI+ F
Sbjct: 139 EVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFRE 198
Query: 257 MIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH--------YACM 308
M GV + + +L AC + GK F L P + +
Sbjct: 199 MQSNGVKANETIMVDLLVACGRCKDIVTGK-WFHGFLQGLGFDPYFQSKVGFNVILATSL 257
Query: 309 VDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 353
+D+ + L A L + MP E W S++ + +AE A
Sbjct: 258 IDMYAKCGDLRTARYLFDGMP-ERTLVSWNSIITGYSQNGDAEEA 301
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 137/430 (31%), Positives = 211/430 (49%), Gaps = 45/430 (10%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 70
AR+ FD + ER I +WN +G E L+ QM
Sbjct: 78 ARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQM--------------------- 116
Query: 71 SEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVS 130
P + ++ T+L+ YA G + VF MP +N S
Sbjct: 117 ------PCR----------------DVMSWNTVLEGYANIGDMEACERVFDDMPERNVFS 154
Query: 131 WSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGF 190
W+ +I YA+N + L F +MV E +PN TM V VH +
Sbjct: 155 WNGLIKGYAQNGRVSEVLGSFKRMVDEGS-VVPNDATMTLVLSACAKLGAFDFGKWVHKY 213
Query: 191 ILRRGLDSI-MPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKK 249
G + + + V NALI MYG+CG I I VF +K D++SWN++I+ +G+G +
Sbjct: 214 GETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTE 273
Query: 250 AIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMV 309
A+ +F M + G+SP ++F+ VLCAC H GLVE+G F SM + + I P +EH C+V
Sbjct: 274 ALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVV 333
Query: 310 DLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAG 369
DLL RA L +A++ I MP + +W +LLG+ +++ ++ E A L +LEP N
Sbjct: 334 DLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPA 393
Query: 370 NYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEK 429
N+V+L++IY +A + D ++ M +K G SWIE + F SS E +P+ E+
Sbjct: 394 NFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEE 453
Query: 430 LRALLIKLST 439
L+ +L +L +
Sbjct: 454 LQRILRELKS 463
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 142/326 (43%), Gaps = 45/326 (13%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSG--IPSDRF 59
Y +G ++ +VFD+ ER ++ WN + A GR E+L +++M G +P+D
Sbjct: 131 YANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDA- 189
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEE-NIHVMTTLLDVYAKFGCISYANS 118
T T VL AC + GK +H GY + +++V L+D+Y K G I A
Sbjct: 190 TMTLVLSACA----KLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAME 245
Query: 119 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
VF+ + ++ +SW+ MI A + +AL LFH+M P+ VT V V
Sbjct: 246 VFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGIS--PDKVTFVGVLCACK-- 301
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
H ++ GL N++ T + SI P++ ++
Sbjct: 302 ---------HMGLVEDGL----AYFNSMFT------DFSI---------MPEIEHCGCVV 333
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 298
+ G+ +A++ M V + + T+L A V+ G++ E ++
Sbjct: 334 DLLSRAGFLTQAVEFINKM---PVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPR 390
Query: 299 HPGMEHYACMVDLLGRANRLDEAIKL 324
+P ++ + ++ G A R D+A +L
Sbjct: 391 NPA--NFVMLSNIYGDAGRFDDAARL 414
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 37/168 (22%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G+++ A +VF + R + WN LA G G E L L+ +M SGI D+ T
Sbjct: 233 MYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVT 292
Query: 61 YTYVLKAC---------------VVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLD 105
+ VL AC + ++FS+ P I ++D
Sbjct: 293 FVGVLCACKHMGLVEDGLAYFNSMFTDFSIMP------------------EIEHCGCVVD 334
Query: 106 VYAKFGCISYANSVFRAMPAK-NSVSWSAMIGC---YAKNDMPVKALE 149
+ ++ G ++ A MP K ++V W+ ++G Y K D+ ALE
Sbjct: 335 LLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALE 382
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 141/426 (33%), Positives = 228/426 (53%), Gaps = 35/426 (8%)
Query: 2 YHELGSLDCARKVFD------------ETRER---TIYIWNAFFRALAMVGRGEELLELY 46
Y + G ++ AR +FD E RER + WN+ +A VG L+
Sbjct: 245 YGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLF 304
Query: 47 RQM-NWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHA-NILRHGYEENIHVMTTLL 104
QM + I + YV + + F+++ ++ H+ N++ GY
Sbjct: 305 DQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGY----------- 353
Query: 105 DVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPN 164
A G + A F P K++VSW+++I Y KN +A++LF +M +E P+
Sbjct: 354 ---ASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEG--EKPD 408
Query: 165 SVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFD 224
T+ S+ +H +++ + + PV NALITMY RCGEI R+FD
Sbjct: 409 PHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDV-PVHNALITMYSRCGEIMESRRIFD 467
Query: 225 KVK-NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVE 283
++K +V++WN++I Y +G +A+ +F +M G+ PS+I+F++VL AC+HAGLV+
Sbjct: 468 EMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVD 527
Query: 284 EGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGS 343
E K F SM+S Y+I P MEHY+ +V++ + +EA+ +I MPFEP TVWG+LL +
Sbjct: 528 EAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDA 587
Query: 344 CRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVP 403
CRI+ N LA A+ + LEP ++ YVLL ++YA+ +W + VR M + ++K
Sbjct: 588 CRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKER 647
Query: 404 GCSWIE 409
G SW++
Sbjct: 648 GSSWVD 653
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 123/304 (40%), Gaps = 65/304 (21%)
Query: 8 LDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPS-DRFTYTYVLK 66
++ ARK+FD +R + WN G G LE R++ + +PS D F++
Sbjct: 87 MNQARKLFDVMPKRDVVTWNTMISGYVSCG-GIRFLEEARKL-FDEMPSRDSFSW----- 139
Query: 67 ACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK 126
N + GY +N + LL +F MP +
Sbjct: 140 --------------------NTMISGYAKNRRIGEALL--------------LFEKMPER 165
Query: 127 NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXX 186
N+VSWSAMI + +N A+ LF +M ++ DS P +V+
Sbjct: 166 NAVSWSAMITGFCQNGEVDSAVVLFRKMPVK--DSSP-LCALVAGLIKNERLSEAAWVLG 222
Query: 187 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN---------------PDV 231
+G ++ G + ++ N LI YG+ G++ +FD++ + +V
Sbjct: 223 QYGSLV-SGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNV 281
Query: 232 VSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFES 291
VSWNS+I Y G A +F+ M + IS+ T++ H +E+ LF
Sbjct: 282 VSWNSMIKAYLKVGDVVSARLLFDQMKDRDT----ISWNTMIDGYVHVSRMEDAFALFSE 337
Query: 292 MLSK 295
M ++
Sbjct: 338 MPNR 341
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 138/443 (31%), Positives = 227/443 (51%), Gaps = 47/443 (10%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY +LG + A+ VF + + WN+ L + E EL+ +M
Sbjct: 319 MYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM----------- 367
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
GK++ + T ++ ++ G IS +F
Sbjct: 368 -------------------PGKDMVS-------------WTDMIKGFSGKGEISKCVELF 395
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVL-EACDSIPNSVTMVSVXXXXXXXX 179
MP K++++W+AMI + N +AL FH+M+ E C PNS T SV
Sbjct: 396 GMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVC---PNSYTFSSVLSATASLA 452
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+HG +++ + + + V N+L++MY +CG + ++F + P++VS+N++IS
Sbjct: 453 DLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMIS 512
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
Y NG+GKKA+++F + G P+ ++F+ +L AC H G V+ G F+SM S Y I
Sbjct: 513 GYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIE 572
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAM 359
PG +HYACMVDLLGR+ LD+A LI MP +P VWGSLL + + H +LAE A+
Sbjct: 573 PGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKK 632
Query: 360 LFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVS 419
L ELEP +A YV+L+ +Y+ D + + + ++K PG SWI +K ++++F++
Sbjct: 633 LIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLA 692
Query: 420 SEEDNPQIEKLRALLIKLSTEMK 442
+E +E++ L + EM+
Sbjct: 693 GDESQLNLEEIGFTLKMIRKEME 715
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 119/285 (41%), Gaps = 37/285 (12%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAM----VGRGEELL--------ELYRQM 49
Y E G + A +VFDE R +NA A+ +G+ EL Y M
Sbjct: 91 YAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATM 150
Query: 50 NWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGY------EENIHVM--- 100
+ + RF L ++ P++ + +N+L GY E + V
Sbjct: 151 ITGFVRAGRFDEAEFL-------YAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGM 203
Query: 101 --------TTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFH 152
++++ Y K G I A S+F M +N ++W+AMI Y K LF
Sbjct: 204 AVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFL 263
Query: 153 QMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGR 212
+M E D NS T+ + +HG + R L+ + + N+L++MY +
Sbjct: 264 RMRQEG-DVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSK 322
Query: 213 CGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM 257
G + + VF +KN D VSWNSLI+ +A ++FE M
Sbjct: 323 LGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM 367
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 12/140 (8%)
Query: 204 NALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVS 263
N+ I+ + R G + E +F ++ N +VSW ++IS Y NG KA Q+F+ M + V+
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVR-VT 112
Query: 264 PSYISFITVLC--ACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEA 321
SY + IT + C E LF + K + YA M+ RA R DEA
Sbjct: 113 TSYNAMITAMIKNKCDLGKAYE----LFCDIPEKNAV-----SYATMITGFVRAGRFDEA 163
Query: 322 IKLIEDMPFEPGPTVWGSLL 341
L + P + +V ++L
Sbjct: 164 EFLYAETPVKFRDSVASNVL 183
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 104/250 (41%), Gaps = 20/250 (8%)
Query: 88 ILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPV-K 146
I R +I ++ YA+ G +S A VF MP + + S++AMI KN + K
Sbjct: 72 IFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGK 131
Query: 147 ALELFHQMVLEACDSIP--NSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVIN 204
A ELF CD IP N+V+ ++ ++ + DS+ N
Sbjct: 132 AYELF-------CD-IPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVAS--N 181
Query: 205 ALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSP 264
L++ Y R G+ + RVF + +VVS +S++ Y G A +F+ M + V
Sbjct: 182 VLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNV-- 239
Query: 265 SYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIK- 323
I++ ++ AG E+G LF M + + A M R E +
Sbjct: 240 --ITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQI 297
Query: 324 --LIEDMPFE 331
L+ MP E
Sbjct: 298 HGLVSRMPLE 307
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 234 bits (598), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 141/472 (29%), Positives = 245/472 (51%), Gaps = 44/472 (9%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 70
A KVFDE E + A R E + ++++ GI + FT+ V+ +
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTT 105
Query: 71 SEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYAN------------- 117
S ++ GK++H L+ G N+ V + +L+ Y K ++ A
Sbjct: 106 SR----DVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVS 161
Query: 118 ------------------SVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEAC 159
S+FRAMP ++ V+W+A+IG +++ +A+ F M+ E
Sbjct: 162 ITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGV 221
Query: 160 DSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR-RGLDSIMPVINALITMYGRCGEISI 218
IPN T +H ++ G + V N+LI+ Y +CG +
Sbjct: 222 -VIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMED 280
Query: 219 GERVFDKVKNP--DVVSWNSLISMYGNNGYGKKAIQIFENMIHQ-GVSPSYISFITVLCA 275
F+K++ ++VSWNS+I Y +NG G++A+ +FE M+ + P+ ++ + VL A
Sbjct: 281 SLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFA 340
Query: 276 CSHAGLVEEGKILFESMLSKYRIHPGM---EHYACMVDLLGRANRLDEAIKLIEDMPFEP 332
C+HAGL++EG + F ++ Y P + EHYACMVD+L R+ R EA +LI+ MP +P
Sbjct: 341 CNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDP 399
Query: 333 GPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRK 392
G W +LLG C+IH N LA+ A++ + EL+P + +YV+L++ Y+ + W +V +R+
Sbjct: 400 GIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRR 459
Query: 393 LMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKEQ 444
M + L++ GCSWIEV+ +I FV+++++N +++ +L +S ++E
Sbjct: 460 KMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLEEN 511
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 8/198 (4%)
Query: 113 ISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI-PNSVTMVSV 171
I A+ VF +P + +S +A+IG + K V+A + F +++ C I PN T +V
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLL---CLGIRPNEFTFGTV 99
Query: 172 XXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDV 231
+H + L+ GL S + V +A++ Y + ++ R FD ++P+V
Sbjct: 100 IGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNV 159
Query: 232 VSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFES 291
VS +LIS Y ++A+ +F M + V +++ V+ S G EE F
Sbjct: 160 VSITNLISGYLKKHEFEEALSLFRAMPERSV----VTWNAVIGGFSQTGRNEEAVNTFVD 215
Query: 292 MLSKYRIHPGMEHYACMV 309
ML + + P + C +
Sbjct: 216 MLREGVVIPNESTFPCAI 233
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 234 bits (598), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 146/471 (30%), Positives = 230/471 (48%), Gaps = 38/471 (8%)
Query: 6 GSLDCARKVFDETRERTIYI-WNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYV 64
G +D A VF E I WN A G EE L++ M +G+ D ++ V
Sbjct: 207 GDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAV 266
Query: 65 LKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANS------ 118
L V+S S+ L+ GKE+HA +L++G N V + ++DVY K G + YA S
Sbjct: 267 LN--VLS--SLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYG 322
Query: 119 -------------------------VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQ 153
+F ++ KN V W+AM Y P LEL
Sbjct: 323 FGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARA 382
Query: 154 MVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRC 213
+ ++ P+S+ MVSV +HG LR G+ ++ A + MY +C
Sbjct: 383 FIANETNT-PDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKC 441
Query: 214 GEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVL 273
G + ER+FD D V +N++I+ ++G+ K+ Q FE+M G P I+F+ +L
Sbjct: 442 GNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALL 501
Query: 274 CACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM-PFEP 332
AC H GLV EG+ F+SM+ Y I P HY CM+DL G+A RLD+AI+L+E + E
Sbjct: 502 SACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEK 561
Query: 333 GPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRK 392
+ G+ L +C + N EL + L +E N Y+ +A+ YA + W +++ +R
Sbjct: 562 DAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRH 621
Query: 393 LMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKE 443
M + L+ GCSW + K+ + F SS+ + + E + A+L ++ ++ E
Sbjct: 622 QMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAMLHFVTKDLSE 672
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 102/237 (43%), Gaps = 37/237 (15%)
Query: 87 NILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA-KNSVSWSAMIGCYAKND-MP 144
N+ E N++ ++ Y KF + A +F + ++ ++++ ++ +AK D
Sbjct: 44 NVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCE 103
Query: 145 VKALELFHQMVLEACDSI-PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVI 203
+A+E+F +M + D I + T+ ++ +HG +++ G D +
Sbjct: 104 SEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAV 163
Query: 204 NALITMYGRCGEISIGERVF--------------------------DKV-----KNP--- 229
++LI MY +CG+ +F DK +NP
Sbjct: 164 SSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELN 223
Query: 230 DVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGK 286
D +SWN+LI+ Y NGY ++A+++ +M G+ SF VL S ++ GK
Sbjct: 224 DTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGK 280
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/471 (32%), Positives = 224/471 (47%), Gaps = 74/471 (15%)
Query: 6 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 65
G+L A K+FDE + + I N R A + E+ + LY +M G+ DR+T+T+VL
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 66 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLL--------------------- 104
KAC E+ G H ++RHG+ N +V L+
Sbjct: 120 KACSKLEWR----SNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAK 175
Query: 105 ----------DVYAKFGCISYANSVFRAMPAKNSVSWSAMI-GCYAKNDM---------- 143
YAK G I A +F MP K+ V+W+ MI GC +M
Sbjct: 176 AHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRF 235
Query: 144 --------------------PVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXX 183
P +AL +F +M P+ VT++S+
Sbjct: 236 TEKDVVTWNAMISGYVNCGYPKEALGIFKEM--RDAGEHPDVVTILSLLSACAVLGDLET 293
Query: 184 XXXVHGFILRRGLDSI-----MPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
+H +IL S P+ NALI MY +CG I VF VK+ D+ +WN+LI
Sbjct: 294 GKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLI 353
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 298
+ + + +I++FE M V P+ ++FI V+ ACSH+G V+EG+ F M Y I
Sbjct: 354 VGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNI 412
Query: 299 HPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASA 358
P ++HY CMVD+LGRA +L+EA +E M EP VW +LLG+C+I+ N EL + A+
Sbjct: 413 EPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANE 472
Query: 359 MLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIE 409
L + +G+YVLL++IYA W V+ VRK+ ++K G S IE
Sbjct: 473 KLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 131/312 (41%), Gaps = 26/312 (8%)
Query: 82 KEIHANILRHGYEENIHVMTTLLDVYAKF----GCISYANSVFRAMPAKNSVSWSAMIGC 137
K+IHA+++ +G N+ V+ L +Y+ G + YA+ +F +P + + ++
Sbjct: 29 KQIHASMVVNGLMSNLSVVGEL--IYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRG 86
Query: 138 YAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD 197
A++ P K + L+ +M E P+ T V HG ++R G
Sbjct: 87 SAQSMKPEKTVSLYTEM--EKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFV 144
Query: 198 SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM 257
V NALI + CG++ I +FD V+W+S+ S Y G +A+++F+ M
Sbjct: 145 LNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEM 204
Query: 258 IHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANR 317
++ +++ ++ C ++ + LF+ K + + M+
Sbjct: 205 PYK----DQVAWNVMITGCLKCKEMDSARELFDRFTEKDVV-----TWNAMISGYVNCGY 255
Query: 318 LDEAI---KLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYV-- 372
EA+ K + D P SLL +C + + E +R + E ++ YV
Sbjct: 256 PKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGT 315
Query: 373 ----LLADIYAE 380
L D+YA+
Sbjct: 316 PIWNALIDMYAK 327
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 156/480 (32%), Positives = 238/480 (49%), Gaps = 43/480 (8%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y ELG+ A KVF + +N A G E L+LY +M GI D +T
Sbjct: 176 YMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTV 235
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHG--YEENIHVMTTLLDVYAK---------- 109
+L C + ++ GK +H I R G Y N+ + LLD+Y K
Sbjct: 236 LSLLVCCG----HLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRA 291
Query: 110 ---------------------FGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKAL 148
G + A +VF MP ++ VSW++++ Y+K + +
Sbjct: 292 FDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTV 351
Query: 149 -ELFHQM-VLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINAL 206
ELF++M ++E P+ VTMVS+ VHG ++R L + +AL
Sbjct: 352 RELFYEMTIVEKVK--PDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSAL 409
Query: 207 ITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSY 266
I MY +CG I VF DV W S+I+ +G G++A+Q+F M +GV+P+
Sbjct: 410 IDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNN 469
Query: 267 ISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIE 326
++ + VL ACSH+GLVEEG +F M K+ P EHY +VDLL RA R++EA +++
Sbjct: 470 VTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQ 529
Query: 327 -DMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWS 385
MP P ++WGS+L +CR + E AE A L +LEP G YVLL++IYA W
Sbjct: 530 KKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWG 589
Query: 386 DVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDN-PQIEKLRALLIKLSTEMKEQ 444
R+ M R ++K G S + + ++ FV++E+ N P+ +++ +L L EMK +
Sbjct: 590 YSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMKPK 649
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 181/410 (44%), Gaps = 51/410 (12%)
Query: 7 SLDCARKVF-DETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 65
+LD A+ +F + T ++++N A++ E LY M + DR T+ Y++
Sbjct: 83 NLDLAKLLFLNFTPNPNVFVYNTMISAVS--SSKNECFGLYSSMIRHRVSPDRQTFLYLM 140
Query: 66 KACVVSEFSVYPLQKGKEIHANILRHG-YEENIHVMTTLLDVYAKFGCISYANSVFRAMP 124
KA S F L + K+IH +I+ G ++ +L+ Y + G A VF MP
Sbjct: 141 KA---SSF----LSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMP 193
Query: 125 AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXX 184
+ S++ MI YAK ++AL+L+ +MV + + P+ T++S+
Sbjct: 194 HPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIE--PDEYTVLSLLVCCGHLSDIRLG 251
Query: 185 XXVHGFILRRG--LDSIMPVINALITMYGRCGEISIGERVFDKVKNP------------- 229
VHG+I RRG S + + NAL+ MY +C E + +R FD +K
Sbjct: 252 KGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFV 311
Query: 230 ------------------DVVSWNSLISMYGNNGYGKKAIQ--IFENMIHQGVSPSYISF 269
D+VSWNSL+ Y G ++ ++ +E I + V P ++
Sbjct: 312 RLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTM 371
Query: 270 ITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMP 329
++++ ++ G + G+ + ++ + ++ + ++D+ + ++ A ++
Sbjct: 372 VSLISGAANNGELSHGRWV-HGLVIRLQLKGDAFLSSALIDMYCKCGIIERAF-MVFKTA 429
Query: 330 FEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYA 379
E +W S++ H N + A + + E E N LLA + A
Sbjct: 430 TEKDVALWTSMITGLAFHGNGQQALQLFGRMQE-EGVTPNNVTLLAVLTA 478
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 8/161 (4%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G ++ A VF E+ + +W + LA G G++ L+L+ +M G+ + T
Sbjct: 412 MYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVT 471
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANIL-RHGYEENIHVMTTLLDVYAKFGCISYANSV 119
VL AC S +++G + ++ + G++ +L+D+ + G + A +
Sbjct: 472 LLAVLTACSHSGL----VEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDI 527
Query: 120 F-RAMPAKNSVS-WSAMI-GCYAKNDMPVKALELFHQMVLE 157
+ MP + S S W +++ C D+ L L + LE
Sbjct: 528 VQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLE 568
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 232/455 (50%), Gaps = 14/455 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + +D A +VFDET R I WN+ R +E LE++ M + D T
Sbjct: 271 MYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVT 330
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+L+ C +F PL K IH I+R GYE N +++L+D Y + A +V
Sbjct: 331 VVSLLRVC---KFFEQPL-PCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVL 386
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+M K+ VS S MI A +A+ +F M PN++T++S+
Sbjct: 387 DSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM-----RDTPNAITVISLLNACSVSAD 441
Query: 181 XXXXXXVHGFILRRGLD-SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
HG +RR L + + V +++ Y +CG I + R FD++ +++SW +IS
Sbjct: 442 LRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIIS 501
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
Y NG KA+ +F+ M +G +P+ ++++ L AC+H GLV++G ++F+SM+ +
Sbjct: 502 AYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDH-K 560
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMP--FEPGPTVWGSLLGSCRIHCNAE-LAERA 356
P ++HY+C+VD+L RA +D A++LI+++P + G + WG++L CR +
Sbjct: 561 PSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEV 620
Query: 357 SAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYS 416
A + ELEP + Y+L + +A K W DV +R+L+ +R ++ V G S +
Sbjct: 621 VAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKR 680
Query: 417 FVSSEEDNPQIEKLRALLIKLSTEMKEQGYAPQTN 451
F++ ++ + +L ++ L MK A N
Sbjct: 681 FLAGDKLSQSDSELNDVVQSLHRCMKLDDTAGPIN 715
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 123/492 (25%), Positives = 209/492 (42%), Gaps = 69/492 (14%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y + G L + FD R WN L G EE L + ++ G + T
Sbjct: 71 YMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTL 130
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
V+ AC F G++IH ++R G+ V ++L +YA +S A +F
Sbjct: 131 VLVIHACRSLWFD------GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFD 183
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
M ++ +SWS +I Y ++ PV L+LF +MV EA + P+ VT+ SV
Sbjct: 184 EMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEA-KTEPDCVTVTSVLKACTVMEDI 242
Query: 182 XXXXXVHGFILRRGLD-SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
VHGF +RRG D + + V N+LI MY + ++ RVFD+ ++VSWNS+++
Sbjct: 243 DVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAG 302
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACS-----------HAGLVEEG---- 285
+ +N +A+++F M+ + V ++ +++L C H ++ G
Sbjct: 303 FVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESN 362
Query: 286 KILFESMLSKYR---------------IHPGMEHYACMVDLLGRANRLDEAIKLIEDMPF 330
++ S++ Y + + + M+ L A R DEAI + M
Sbjct: 363 EVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD 422
Query: 331 EPGPTVWGSLLGSCRIHCNAELAERASAML----FELEPWNAGNYVLLADIYAEAKMWSD 386
P SLL +C + + ++ A + + + G ++ D YA+
Sbjct: 423 TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIV--DAYAKCGAIE- 479
Query: 387 VKSVRKLMGKRVLQKVPGCSWIEVKKKIYSF---VSSEEDNPQIEKLRALLIKLSTEMKE 443
M +R ++ +K I S+ +S+ N +K AL EMK+
Sbjct: 480 -------MARRTFDQI-------TEKNIISWTVIISAYAINGLPDKALALF----DEMKQ 521
Query: 444 QGYAPQTNIVHY 455
+GY P N V Y
Sbjct: 522 KGYTP--NAVTY 531
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 137/319 (42%), Gaps = 41/319 (12%)
Query: 31 RALAMVGRGEELLELYRQMNWSGIP-SDRFTYTYVLKACVVSEFSVYPLQKGKEIHANIL 89
+ ++ G+ E++ Y ++ +G+ +D F + V KAC + L +G I
Sbjct: 17 KQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACA----KLSWLFQGNSIA---- 68
Query: 90 RHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALE 149
D Y K G + F M +++SVSW+ ++ + L
Sbjct: 69 ---------------DFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLW 113
Query: 150 LFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITM 209
F ++ + + PN+ T+V V +HG+++R G I V N+++ M
Sbjct: 114 WFSKLRVWGFE--PNTSTLVLV--IHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCM 169
Query: 210 YGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG-VSPSYIS 268
Y +S ++FD++ DV+SW+ +I Y + +++F+ M+H+ P ++
Sbjct: 170 YADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVT 228
Query: 269 FITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH---YAC--MVDLLGRANRLDEAIK 323
+VL AC+ ++ G+ + + I G + + C ++D+ + +D A +
Sbjct: 229 VTSVLKACTVMEDIDVGR-----SVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFR 283
Query: 324 LIEDMPFEPGPTVWGSLLG 342
+ ++ W S+L
Sbjct: 284 VFDETTCR-NIVSWNSILA 301
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 138/418 (33%), Positives = 221/418 (52%), Gaps = 7/418 (1%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + A VFD+ + W A E ++L+R M + +R T
Sbjct: 194 MYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVT 253
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
VL ACV E + Y KEIH RHG + + + +Y + G +S + +F
Sbjct: 254 LLSVLPACV--ELN-YGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLF 310
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
++ V WS+MI YA+ + + L +QM E ++ NSVT++++
Sbjct: 311 ETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEA--NSVTLLAIVSACTNSTL 368
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
VH IL+ G S + + NALI MY +CG +S VF ++ D+VSW+S+I+
Sbjct: 369 LSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINA 428
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
YG +G+G +A++IF+ MI G ++F+ +L AC+HAGLVEE + +F + KY +
Sbjct: 429 YGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIF-TQAGKYHMPV 487
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAM- 359
+EHYAC ++LLGR ++D+A ++ +MP +P +W SLL +C H ++A + A
Sbjct: 488 TLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANE 547
Query: 360 LFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSF 417
L + EP N NYVLL+ I+ E+ + + VR++M +R L K G S IE + +I +
Sbjct: 548 LMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPELQIEDY 605
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 163/355 (45%), Gaps = 21/355 (5%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSG-IPSDRF 59
MY + RKVFDE R + + + G E ++L ++M + G IP
Sbjct: 91 MYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSEL 150
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANIL-RHGYEENIHVMTTLLDVYAKFGCISYANS 118
+ +L C S + + HA +L +E++ + T L+D+Y KF + A
Sbjct: 151 VAS-LLALCTRMGSSS---KVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFH 206
Query: 119 VFRAMPAKNSVSWSAMI-GCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXX-XX 176
VF M KN VSW+AMI GC A + + ++LF M E + PN VT++SV
Sbjct: 207 VFDQMEVKNEVSWTAMISGCVANQNYEM-GVDLFRAMQRE--NLRPNRVTLLSVLPACVE 263
Query: 177 XXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNS 236
+HGF R G + + A +TMY RCG +S+ +F+ K DVV W+S
Sbjct: 264 LNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSS 323
Query: 237 LISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKY 296
+IS Y G + + + M +G+ + ++ + ++ AC+++ L+ F S +
Sbjct: 324 MISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLS-----FASTVHSQ 378
Query: 297 RIHPG-MEHYA---CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 347
+ G M H ++D+ + L A ++ ++ E W S++ + +H
Sbjct: 379 ILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELT-EKDLVSWSSMINAYGLH 432
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 115/242 (47%), Gaps = 12/242 (4%)
Query: 40 EELLELYRQMNWSGIPSDRFTYTY--VLKACVVSEFSVYPLQKGKEIHANILRHGYEENI 97
+E L LY+ + + ++ FT V+KAC F P G ++H L+ G + +
Sbjct: 27 DEALRLYK-LKIHSLGTNGFTAILPSVIKACA---FQQEPFLLGAQLHCLCLKAGADCDT 82
Query: 98 HVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLE 157
V +L+ +YAKF VF M +++VS+ ++I ++ + +A++L +M
Sbjct: 83 VVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFY 142
Query: 158 ACDSIPNSVTMVSVXXXXXXXXXXXXXXXV-HGFIL--RRGLDSIMPVINALITMYGRCG 214
IP S + S+ + H +L R +S++ + AL+ MY +
Sbjct: 143 G--FIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVL-LSTALVDMYLKFD 199
Query: 215 EISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLC 274
+ + VFD+++ + VSW ++IS N + + +F M + + P+ ++ ++VL
Sbjct: 200 DHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLP 259
Query: 275 AC 276
AC
Sbjct: 260 AC 261
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 131/434 (30%), Positives = 221/434 (50%), Gaps = 6/434 (1%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY E G + +F+ ER + W + A +G+ + +E + +M S +P + T
Sbjct: 253 MYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQT 312
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ + AC S+ L G+++H N+L G +++ V +++ +Y+ G + A+ +F
Sbjct: 313 FASMFSACA----SLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLF 368
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+ M ++ +SWS +IG Y + + + F M + P + S+
Sbjct: 369 QGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWM--RQSGTKPTDFALASLLSVSGNMAV 426
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
VH L GL+ V ++LI MY +CG I +F + D+VS ++I+
Sbjct: 427 IEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMING 486
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
Y +G K+AI +FE + G P ++FI+VL AC+H+G ++ G F M Y + P
Sbjct: 487 YAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRP 546
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
EHY CMVDLL RA RL +A K+I +M ++ VW +LL +C+ + E RA+ +
Sbjct: 547 AKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERI 606
Query: 361 FELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 420
EL+P A V LA+IY+ + +VRK M + + K PG S I++K + +FVS
Sbjct: 607 LELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSG 666
Query: 421 EEDNPQIEKLRALL 434
+ +PQ E + +L
Sbjct: 667 DRFHPQSEDIYNIL 680
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 135/286 (47%), Gaps = 6/286 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY +G +D + +VF E R W A L GR +E L + +M+ S SD +T
Sbjct: 152 MYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYT 211
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ LKAC + ++ GK IH +++ G+ + V +L +Y + G + +F
Sbjct: 212 FAIALKACA----GLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLF 267
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
M ++ VSW+++I Y + VKA+E F +M PN T S+
Sbjct: 268 ENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKM--RNSQVPPNEQTFASMFSACASLSR 325
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+H +L GL+ + V N+++ MY CG + +F ++ D++SW+++I
Sbjct: 326 LVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGG 385
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGK 286
Y G+G++ + F M G P+ + ++L + ++E G+
Sbjct: 386 YCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGR 431
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 177/413 (42%), Gaps = 18/413 (4%)
Query: 6 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNW--SGIPSDRFTYTY 63
G+L AR+VFD+ I W + + +E L L+ M + D +
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 64 VLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAM 123
VLKAC S Y G+ +HA ++ +++V ++LLD+Y + G I + VF M
Sbjct: 114 VLKACGQSSNIAY----GESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEM 169
Query: 124 PAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXX 183
P +N+V+W+A+I + L F +M + + ++ T
Sbjct: 170 PFRNAVTWTAIITGLVHAGRYKEGLTYFSEM--SRSEELSDTYTFAIALKACAGLRQVKY 227
Query: 184 XXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGN 243
+H ++ RG + + V N+L TMY CGE+ G +F+ + DVVSW SLI Y
Sbjct: 228 GKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKR 287
Query: 244 NGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGME 303
G KA++ F M + V P+ +F ++ AC+ + G+ L ++LS ++ +
Sbjct: 288 IGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLS-LGLNDSLS 346
Query: 304 HYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFEL 363
M+ + L A L + M W +++G +C A E F+
Sbjct: 347 VSNSMMKMYSTCGNLVSASVLFQGMRCRD-IISWSTIIGG---YCQAGFGEEG----FKY 398
Query: 364 EPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYS 416
W + D +A A + S ++ + G R + + C +E + S
Sbjct: 399 FSWMRQSGTKPTD-FALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRS 450
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/392 (33%), Positives = 207/392 (52%), Gaps = 13/392 (3%)
Query: 42 LLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMT 101
LL+ + S D F+ + +K + S G++IHA + + G+ I + T
Sbjct: 48 LLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLD---GRQIHALVRKLGFNAVIQIQT 104
Query: 102 TLLDVYAKFGCISYANSVFRAMPAK-NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACD 160
+L+ Y+ G + YA VF P K N V W+AMI Y +N+ V+A+ELF +M E +
Sbjct: 105 SLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIE 164
Query: 161 SIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGE 220
VT+ +R L + + N+L+ MY + GE
Sbjct: 165 LDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKAR 224
Query: 221 RVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM--IHQG----VSPSYISFITVLC 274
++FD+ DV ++ S+I Y NG ++++++F+ M I Q ++P+ ++FI VL
Sbjct: 225 KLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLM 284
Query: 275 ACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGP 334
ACSH+GLVEEGK F+SM+ Y + P H+ CMVDL R+ L +A + I MP +P
Sbjct: 285 ACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNT 344
Query: 335 TVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLM 394
+W +LLG+C +H N EL E +FEL+ + G+YV L++IYA MW + +R +
Sbjct: 345 VIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRV 404
Query: 395 GKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQ 426
KR ++PG SWIE+ I FVS ++N +
Sbjct: 405 RKR---RMPGKSWIELGSIINEFVSGPDNNDE 433
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 139/330 (42%), Gaps = 46/330 (13%)
Query: 2 YHELGSLDCARKVFDETRER-TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
Y +G +D AR+VFDET E+ I +W A A E +EL+++M I D
Sbjct: 110 YSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVI 169
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYE--ENIHVMTTLLDVYAKFGCISYANS 118
T L AC + +Q G+EI++ ++ ++ + +LL++Y K G A
Sbjct: 170 VTVALSACA----DLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARK 225
Query: 119 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQM--VLEACDSI--PNSVTMVSVXXX 174
+F K+ ++++MI YA N ++LELF +M + ++ D++ PN VT + V
Sbjct: 226 LFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMA 285
Query: 175 XXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSW 234
H ++ G +I D P +
Sbjct: 286 CS-----------HSGLVEEGKRHFKSMI-------------------MDYNLKPREAHF 315
Query: 235 NSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLS 294
++ ++ +G+ K A + M + P+ + + T+L ACS G VE G+ + +
Sbjct: 316 GCMVDLFCRSGHLKDAHEFINQM---PIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFE 372
Query: 295 KYRIHPGMEHYACMVDLLGRANRLDEAIKL 324
R H G Y + ++ DE K+
Sbjct: 373 LDRDHVG--DYVALSNIYASKGMWDEKSKM 400
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/413 (31%), Positives = 208/413 (50%), Gaps = 10/413 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY A KVF+ E+ + WN + G+ + +Y++M+ G+ D FT
Sbjct: 332 MYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFT 391
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ +L + L + + A I++ G I + L+ Y+K G I A+ +F
Sbjct: 392 FGSLLATSL-------DLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLF 444
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
KN +SW+A+I + N P + LE F ++ +P++ T+ ++
Sbjct: 445 ERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSS 504
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
H ++LR G + NALI MY +CG I VF+++ DVVSWNSLIS
Sbjct: 505 LMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISA 564
Query: 241 YGNNGYGKKAIQIFENMIHQG-VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
Y +G G+ A+ ++ M +G V P +F VL ACSHAGLVEEG +F SM+ + +
Sbjct: 565 YSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVI 624
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGP--TVWGSLLGSCRIHCNAELAERAS 357
++H++C+VDLLGRA LDEA L++ G VW +L +C H + +L + +
Sbjct: 625 RNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVA 684
Query: 358 AMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEV 410
+L E E + YV L++IYA A MW + + R+ + K GCSW+ +
Sbjct: 685 KLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 157/328 (47%), Gaps = 22/328 (6%)
Query: 4 ELGSLDCARKVFDETRERT-IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYT 62
+LG ++ A +VFD+ ER + IWNA G E +EL+R+M+ G+ D+F +
Sbjct: 135 KLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFA 194
Query: 63 YVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRA 122
+L C L GK++H+ +++ G+ V+ L+ +Y + A VF
Sbjct: 195 TILSMC-----DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEE 249
Query: 123 --MPAKNSVSWSAMIGCYA--KNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
+ ++ V+++ +I A K D ++L +F +M LEA P +T VSV
Sbjct: 250 TDVAVRDQVTFNVVIDGLAGFKRD---ESLLVFRKM-LEASLR-PTDLTFVSVMGSCSCA 304
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
VHG ++ G + V NA +TMY + +VF+ ++ D+V+WN++I
Sbjct: 305 AMGHQ---VHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMI 361
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 298
S Y GK A+ +++ M GV P +F ++L ++E + ++ + K+ +
Sbjct: 362 SSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLE----MVQACIIKFGL 417
Query: 299 HPGMEHYACMVDLLGRANRLDEAIKLIE 326
+E ++ + ++++A L E
Sbjct: 418 SSKIEISNALISAYSKNGQIEKADLLFE 445
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 187 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 246
VH + +R GL V N L+++Y R G ++ ++ FD++ PDV SW +L+S G
Sbjct: 79 VHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGD 138
Query: 247 GKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESM 292
+ A ++F+ M + + + IT C +G E LF M
Sbjct: 139 IEYAFEVFDKMPERDDVAIWNAMIT---GCKESGYHETSVELFREM 181
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 139/460 (30%), Positives = 225/460 (48%), Gaps = 39/460 (8%)
Query: 8 LDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSG--IPSDRFTYTYVL 65
++ A VF + ++WN R + E + ++ M S + R TY V
Sbjct: 74 MNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVF 133
Query: 66 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGC------------- 112
KA + + G+++H +++ G E++ + T+L +Y GC
Sbjct: 134 KA----YGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIG 189
Query: 113 ------------------ISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQM 154
I A ++F MP +N VSW++MI + +N AL++F +M
Sbjct: 190 FDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREM 249
Query: 155 VLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCG 214
+ D P+ TMVS+ +H +I+R + V+ ALI MY +CG
Sbjct: 250 --QEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCG 307
Query: 215 EISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLC 274
I G VF+ + WNS+I NNG+ ++A+ +F + G+ P +SFI VL
Sbjct: 308 CIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLT 367
Query: 275 ACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGP 334
AC+H+G V F M KY I P ++HY MV++LG A L+EA LI++MP E
Sbjct: 368 ACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDT 427
Query: 335 TVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLM 394
+W SLL +CR N E+A+RA+ L +L+P YVLL++ YA ++ + R LM
Sbjct: 428 VIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLM 487
Query: 395 GKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALL 434
+R ++K GCS IEV +++ F+S +P+ ++ +LL
Sbjct: 488 KERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLL 527
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 118/263 (44%), Gaps = 15/263 (5%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
+ + G +D A+ +FDE +R WN+ GR ++ L+++R+M + D FT
Sbjct: 202 FAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTM 261
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
+L AC S ++G+ IH I+R+ +E N V+T L+D+Y K GCI +VF
Sbjct: 262 VSLLNACAYLGAS----EQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFE 317
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
P K W++MI A N +A++LF + LE P+SV+ + V
Sbjct: 318 CAPKKQLSCWNSMILGLANNGFEERAMDLFSE--LERSGLEPDSVSFIGVLTACAHSGEV 375
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSL 237
F L + I P I M G + E +KN D V W+SL
Sbjct: 376 HRADEF--FRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSL 433
Query: 238 ISM---YGNNGYGKKAIQIFENM 257
+S GN K+A + + +
Sbjct: 434 LSACRKIGNVEMAKRAAKCLKKL 456
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 137/319 (42%), Gaps = 37/319 (11%)
Query: 78 LQKGKEIHANILRHGY-EENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIG 136
+++ K+IHA++++ G + + L A ++YA VF + KN W+ +I
Sbjct: 38 MRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIR 97
Query: 137 CYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGL 196
++++ P A+ +F M+ + P +T SV +HG +++ GL
Sbjct: 98 GFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGL 157
Query: 197 DSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVS----------------------- 233
+ + N ++ MY CG + R+F + DVV+
Sbjct: 158 EDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDE 217
Query: 234 --------WNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEG 285
WNS+IS + NG K A+ +F M + V P + +++L AC++ G E+G
Sbjct: 218 MPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQG 277
Query: 286 KILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCR 345
+ + E ++ + R ++D+ + ++E + + E P + + W S++
Sbjct: 278 RWIHEYIV-RNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAP-KKQLSCWNSMILGL- 334
Query: 346 IHCNAELAERASAMLFELE 364
N ERA + ELE
Sbjct: 335 --ANNGFEERAMDLFSELE 351
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 143/478 (29%), Positives = 240/478 (50%), Gaps = 44/478 (9%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNW-SGIPSDRF 59
MY LG ++ KVFDE +R + WN + GR E+ + ++++M+ S + D
Sbjct: 90 MYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEG 149
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
T L AC ++ L+ G+ I+ ++ +E ++ + L+D++ K GC+ A +V
Sbjct: 150 TIVSTLSACS----ALKNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARAV 204
Query: 120 FRAM-------------------------------PAKNSVSWSAMIGCYAKNDMPVKAL 148
F +M P K+ V W+AM+ Y + + +AL
Sbjct: 205 FDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEAL 264
Query: 149 ELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALIT 208
ELF M + P++ +VS+ +HG+I + V AL+
Sbjct: 265 ELFRCM--QTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVD 322
Query: 209 MYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYIS 268
MY +CG I VF ++K D SW SLI NG +A+ ++ M + GV I+
Sbjct: 323 MYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAIT 382
Query: 269 FITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 328
F+ VL AC+H G V EG+ +F SM ++ + P EH +C++DLL RA LDEA +LI+ M
Sbjct: 383 FVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKM 442
Query: 329 PFEPGPT---VWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWS 385
E T V+ SLL + R + N ++AER + L ++E ++ + LLA +YA A W
Sbjct: 443 RGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWE 502
Query: 386 DVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEE--DNPQIEKLRALLIKLSTEM 441
DV +VR+ M ++K PGCS IE+ + F+ ++ +P+++++ ++L + + M
Sbjct: 503 DVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSMLHQTTNLM 560
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 169/377 (44%), Gaps = 48/377 (12%)
Query: 22 TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQK- 80
++ ++N ++LA ++L L+ ++ G+ D FT VLK S+ L+K
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLK-------SIGRLRKV 62
Query: 81 --GKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCY 138
G+++H ++ G E + +V +L+ +YA G I + VF MP ++ VSW+ +I Y
Sbjct: 63 IEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSY 122
Query: 139 AKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDS 198
N A+ +F +M E+ T+VS ++ F++ +
Sbjct: 123 VGNGRFEDAIGVFKRMSQESNLKFDEG-TIVSTLSACSALKNLEIGERIYRFVVTE-FEM 180
Query: 199 IMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGN--------------- 243
+ + NAL+ M+ +CG + VFD +++ +V W S++ Y +
Sbjct: 181 SVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSP 240
Query: 244 -----------NGYGK-----KAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKI 287
NGY + +A+++F M G+ P +++L C+ G +E+GK
Sbjct: 241 VKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKW 300
Query: 288 LFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 347
+ +++ R+ +VD+ + ++ A+++ ++ E W SL+ ++
Sbjct: 301 I-HGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK-ERDTASWTSLIYGLAMN 358
Query: 348 CNAELAERASAMLFELE 364
++ RA + +E+E
Sbjct: 359 ---GMSGRALDLYYEME 372
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 225 bits (573), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 141/465 (30%), Positives = 234/465 (50%), Gaps = 26/465 (5%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y + G +D A ++FDE ER I WN+ +AL GR +E + L+ +M + S
Sbjct: 150 YAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMV 209
Query: 62 TYVLKACVVSE----FSVYPLQKGKEIHANILRHGYEEN---------IHVM-------- 100
+ K V E F P + I N + GY +N VM
Sbjct: 210 DGLAKNGKVDEARRLFDCMP--ERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASW 267
Query: 101 TTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACD 160
T++ + + ++ A +F MP KN +SW+ MI Y +N +AL +F +M+ +
Sbjct: 268 NTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSV 327
Query: 161 SIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGE 220
PN T VS+ +H I + V +AL+ MY + GE+
Sbjct: 328 K-PNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAAR 386
Query: 221 RVFDK--VKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSH 278
++FD V D++SWNS+I++Y ++G+GK+AI+++ M G PS ++++ +L ACSH
Sbjct: 387 KMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSH 446
Query: 279 AGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWG 338
AGLVE+G F+ ++ + EHY C+VDL GRA RL + I + +G
Sbjct: 447 AGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYG 506
Query: 339 SLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRV 398
++L +C +H +A+ + E +AG YVL+++IYA + +R M ++
Sbjct: 507 AILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKG 566
Query: 399 LQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKE 443
L+K PGCSW++V K+ + FV ++ +PQ E L ++L L +M++
Sbjct: 567 LKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMRK 611
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 132/307 (42%), Gaps = 34/307 (11%)
Query: 4 ELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTY 63
++G + ARK+FD ER + W +G E EL+ + + S + T+
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDR-----VDSRKNVVTW 112
Query: 64 VLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAM 123
+ S Y K I + + E N+ T++D YA+ G I A +F M
Sbjct: 113 ------TAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEM 166
Query: 124 PAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXX 183
P +N VSW++M+ + +A+ LF +M S V ++
Sbjct: 167 PERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFD 226
Query: 184 ----------XXXVHGFILRRGLD------SIMP-----VINALITMYGRCGEISIGERV 222
+ G+ +D +MP N +IT + R E++ +
Sbjct: 227 CMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGL 286
Query: 223 FDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG-VSPSYISFITVLCACSH-AG 280
FD++ +V+SW ++I+ Y N ++A+ +F M+ G V P+ +++++L ACS AG
Sbjct: 287 FDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAG 346
Query: 281 LVEEGKI 287
LVE +I
Sbjct: 347 LVEGQQI 353
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 106/233 (45%), Gaps = 50/233 (21%)
Query: 109 KFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTM 168
K G I+ A +F +P ++ V+W+ +I Y K +A ELF ++ DS N VT
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV-----DSRKNVVTW 112
Query: 169 VSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN 228
A+++ Y R ++SI E +F ++
Sbjct: 113 T-----------------------------------AMVSGYLRSKQLSIAEMLFQEMPE 137
Query: 229 PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKIL 288
+VVSWN++I Y +G KA+++F+ M + + +S+ +++ A G ++E L
Sbjct: 138 RNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQRGRIDEAMNL 193
Query: 289 FESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 341
FE M + + + MVD L + ++DEA +L + MP E W +++
Sbjct: 194 FERMPRRDVV-----SWTAMVDGLAKNGKVDEARRLFDCMP-ERNIISWNAMI 240
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 140/317 (44%), Gaps = 36/317 (11%)
Query: 33 LAMVGRGEELLELYRQMNWSGIPS-DRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRH 91
L VG+ E +L+ G+P D T+T+V+ + + +++ +E+ R
Sbjct: 56 LCKVGKIAEARKLF-----DGLPERDVVTWTHVITGYI----KLGDMREARELFD---RV 103
Query: 92 GYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELF 151
+N+ T ++ Y + +S A +F+ MP +N VSW+ MI YA++ KALELF
Sbjct: 104 DSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELF 163
Query: 152 HQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYG 211
+M N V+ S+ + + RR + S +++ L
Sbjct: 164 DEMPER------NIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGL----A 213
Query: 212 RCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFIT 271
+ G++ R+FD + +++SWN++I+ Y N +A Q+F+ M + + S+ T
Sbjct: 214 KNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPER----DFASWNT 269
Query: 272 VLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAI----KLIED 327
++ + + LF+ M K I + M+ +EA+ K++ D
Sbjct: 270 MITGFIRNREMNKACGLFDRMPEKNVI-----SWTTMITGYVENKENEEALNVFSKMLRD 324
Query: 328 MPFEPGPTVWGSLLGSC 344
+P + S+L +C
Sbjct: 325 GSVKPNVGTYVSILSAC 341
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 1 MYHELGSLDCARKVFDETR--ERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDR 58
MY + G L ARK+FD +R + WN+ A G G+E +E+Y QM G
Sbjct: 375 MYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSA 434
Query: 59 FTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVM----TTLLDVYAKFGCIS 114
TY +L AC + ++KG E +++R +E++ + T L+D+ + G +
Sbjct: 435 VTYLNLLFACSHAGL----VEKGMEFFKDLVR---DESLPLREEHYTCLVDLCGRAGRLK 487
Query: 115 YANSVFRAMPAKNSVSWSAMI--GCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 171
+ A+ S S+ I C N++ + A E+ +++ D V M ++
Sbjct: 488 DVTNFINCDDARLSRSFYGAILSACNVHNEVSI-AKEVVKKVLETGSDDAGTYVLMSNI 545
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 225 bits (573), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 139/477 (29%), Positives = 233/477 (48%), Gaps = 42/477 (8%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y G A F + I WNA A A + + L L + I D T
Sbjct: 376 YARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTI 435
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGY---EENIHVMTTLLDVYAKFGCISYANS 118
+LK C+ +V + K KE+H ++ G EE + LLD YAK G + YA+
Sbjct: 436 LSLLKFCI----NVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHK 491
Query: 119 VF------RAMPAKNSV--------------------------SWSAMIGCYAKNDMPVK 146
+F R + + NS+ +WS M+ YA++ P +
Sbjct: 492 IFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNE 551
Query: 147 ALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINAL 206
A+ +F + ++A PN+VT++++ HG+I+R GL I + L
Sbjct: 552 AIGVFRE--IQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIR-LKGTL 608
Query: 207 ITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSY 266
+ +Y +CG + VF D+V + ++++ Y +G GK+A+ I+ +M + P +
Sbjct: 609 LDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDH 668
Query: 267 ISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIE 326
+ T+L AC HAGL+++G +++S+ + + + P ME YAC VDL+ R RLD+A +
Sbjct: 669 VFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVT 728
Query: 327 DMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSD 386
MP EP +WG+LL +C + +L + L + E + GN+VL++++YA W
Sbjct: 729 QMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEG 788
Query: 387 VKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKE 443
V +R LM K+ ++K GCSW+EV + FVS + +P+ + + L+ L +MKE
Sbjct: 789 VMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMKE 845
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 148/293 (50%), Gaps = 14/293 (4%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPS-DRF 59
MY + +D +K+F + +WN L+ V G E + ++ M+++ P
Sbjct: 65 MYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLS-VSCGRETMRFFKAMHFADEPKPSSV 123
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCI-SYANS 118
T+ VL CV S GK +H+ I++ G E++ V L+ +YAKFG I A +
Sbjct: 124 TFAIVLPLCVRLGDSY----NGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYT 179
Query: 119 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVX---XXX 175
F + K+ VSW+A+I +++N+M A F M+ E + PN T+ +V
Sbjct: 180 AFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTE--PNYATIANVLPVCASM 237
Query: 176 XXXXXXXXXXXVHGFILRRG-LDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSW 234
+H ++++R L + + V N+L++ Y R G I +F ++ + D+VSW
Sbjct: 238 DKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSW 297
Query: 235 NSLISMYGNNGYGKKAIQIFENMIHQG-VSPSYISFITVLCACSHAGLVEEGK 286
N +I+ Y +N KA Q+F N++H+G VSP ++ I++L C+ + GK
Sbjct: 298 NVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGK 350
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 170/380 (44%), Gaps = 19/380 (5%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 70
A FD ++ + WNA + + + M + T VL C
Sbjct: 177 AYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCAS 236
Query: 71 SEFSVYPLQKGKEIHANILRHGY-EENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSV 129
+ ++ + G++IH+ +++ + + ++ V +L+ Y + G I A S+F M +K+ V
Sbjct: 237 MDKNI-ACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLV 295
Query: 130 SWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHG 189
SW+ +I YA N KA +LFH +V + D P+SVT++S+ +H
Sbjct: 296 SWNVVIAGYASNCEWFKAFQLFHNLVHKG-DVSPDSVTIISILPVCAQLTDLASGKEIHS 354
Query: 190 FILRRG-LDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGK 248
+ILR L V NALI+ Y R G+ S F + D++SWN+++ + ++
Sbjct: 355 YILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQF 414
Query: 249 KAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA-- 306
+ + + +++++ ++ ++ +++L C + + GK+ + Y + G+ H
Sbjct: 415 QFLNLLHHLLNEAITLDSVTILSLLKFCINVQGI--GKV---KEVHGYSVKAGLLHDEEE 469
Query: 307 -----CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLF 361
++D + ++ A K+ + + SLL + N+ + A +
Sbjct: 470 PKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSG---YVNSGSHDDAQMLFT 526
Query: 362 ELEPWNAGNYVLLADIYAEA 381
E+ + + L+ IYAE+
Sbjct: 527 EMSTTDLTTWSLMVRIYAES 546
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 124/281 (44%), Gaps = 10/281 (3%)
Query: 52 SGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFG 111
SG +D + V+KAC SV L G+ +H + + G+ V ++L++YAK
Sbjct: 15 SGFGTDHRVFLDVVKACA----SVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCR 70
Query: 112 CISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 171
+ +FR M + + V W+ ++ + + + + F M A + P+SVT V
Sbjct: 71 RMDDCQKMFRQMDSLDPVVWNIVLTGLSVS-CGRETMRFFKAMHF-ADEPKPSSVTFAIV 128
Query: 172 XXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEI-SIGERVFDKVKNPD 230
+H +I++ GL+ V NAL++MY + G I FD + + D
Sbjct: 129 LPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKD 188
Query: 231 VVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAG---LVEEGKI 287
VVSWN++I+ + N A + F M+ + P+Y + VL C+ G+
Sbjct: 189 VVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQ 248
Query: 288 LFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 328
+ ++ + + + +V R R++EA L M
Sbjct: 249 IHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRM 289
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 7/164 (4%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y + GSL A VF R + ++ A A+ GRG+E L +Y M S I D
Sbjct: 611 VYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVF 670
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILR-HGYEENIHVMTTLLDVYAKFGCISYANSV 119
T +L AC + +Q G +I+ +I HG + + +D+ A+ G + A S
Sbjct: 671 ITTMLTACCHAGL----IQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSF 726
Query: 120 FRAMPAK-NSVSWSAMI-GCYAKNDMPVKALELFHQMVLEACDS 161
MP + N+ W ++ C N M + H + E+ D+
Sbjct: 727 VTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDT 770
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/411 (34%), Positives = 212/411 (51%), Gaps = 39/411 (9%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G + ARKVF + E+ + ++NA A + +E L L + M GI D T
Sbjct: 161 MYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVIT 220
Query: 61 YTYVLKACVVSEFS-VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
+ ++S FS + +K EI + GY+ ++
Sbjct: 221 WN-----ALISGFSHMRNEEKVSEILELMCLDGYKPDV---------------------- 253
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
VSW+++I N KA + F QM+ PNS T++++
Sbjct: 254 ---------VSWTSIISGLVHNFQNEKAFDAFKQMLTHGL--YPNSATIITLLPACTTLA 302
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+HG+ + GL+ V +AL+ MYG+CG IS +F K V++NS+I
Sbjct: 303 YMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIF 362
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
Y N+G KA+++F+ M G +++F +L ACSHAGL + G+ LF M +KYRI
Sbjct: 363 CYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIV 422
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAM 359
P +EHYACMVDLLGRA +L EA ++I+ M EP VWG+LL +CR H N ELA A+
Sbjct: 423 PRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKH 482
Query: 360 LFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEV 410
L ELEP N+GN +LL +YA A W V ++K++ K+ ++ G SW+E
Sbjct: 483 LAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVET 533
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 169/367 (46%), Gaps = 50/367 (13%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y E G + ARKVFDE +R I A A G +E L+ +R+M G+ D F
Sbjct: 61 YVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIV 120
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
+LKA ++ + GK IH +L+ YE + ++++L+D+Y+KFG + A VF
Sbjct: 121 PSLLKA----SRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFS 176
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
+ ++ V ++AMI YA N +AL L M L P+ +T ++
Sbjct: 177 DLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIK--PDVITWNAL---------- 224
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY 241
+ GF R + + ++ + D K PDVVSW S+IS
Sbjct: 225 -----ISGFSHMRNEEKVSEILELM---------------CLDGYK-PDVVSWTSIISGL 263
Query: 242 GNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPG 301
+N +KA F+ M+ G+ P+ + IT+L AC+ ++ GK + Y + G
Sbjct: 264 VHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGK-----EIHGYSVVTG 318
Query: 302 MEHY----ACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERAS 357
+E + + ++D+ G+ + EA+ L P TV + + C + N LA++A
Sbjct: 319 LEDHGFVRSALLDMYGKCGFISEAMILFRKTP--KKTTVTFNSMIFC--YANHGLADKAV 374
Query: 358 AMLFELE 364
+ ++E
Sbjct: 375 ELFDQME 381
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 95/199 (47%), Gaps = 2/199 (1%)
Query: 80 KGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYA 139
+G+ +HA+++ G + L+ Y + G + A VF MP ++ MIG A
Sbjct: 34 RGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACA 93
Query: 140 KNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSI 199
+N ++L+ F +M + ++ + S+ +H +L+ +S
Sbjct: 94 RNGYYQESLDFFREMYKDGLK--LDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESD 151
Query: 200 MPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIH 259
++++LI MY + GE+ +VF + D+V +N++IS Y NN +A+ + ++M
Sbjct: 152 AFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKL 211
Query: 260 QGVSPSYISFITVLCACSH 278
G+ P I++ ++ SH
Sbjct: 212 LGIKPDVITWNALISGFSH 230
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 148/462 (32%), Positives = 230/462 (49%), Gaps = 39/462 (8%)
Query: 6 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 65
G +D A K + + Y WN R + E+ + +Y QM G+ D TY +++
Sbjct: 56 GDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLM 115
Query: 66 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTL---------------------- 103
K+ S S L G +H ++++ G E ++ + TL
Sbjct: 116 KSS--SRLSNRKL--GGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPH 171
Query: 104 ---------LDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQM 154
LD YAK G + A VF M ++ V+WS+MI Y K KALE+F QM
Sbjct: 172 KNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQM 231
Query: 155 VLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCG 214
+ S N VTMVSV VH +IL L + + +LI MY +CG
Sbjct: 232 -MRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCG 290
Query: 215 EISIGERVFDK--VKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITV 272
I VF + VK D + WN++I ++G+ ++++Q+F M + P I+F+ +
Sbjct: 291 SIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCL 350
Query: 273 LCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEP 332
L ACSH GLV+E F+S L + P EHYACMVD+L RA + +A I +MP +P
Sbjct: 351 LAACSHGGLVKEAWHFFKS-LKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKP 409
Query: 333 GPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRK 392
++ G+LL C H N ELAE L EL+P N G YV LA++YA K + +S+R+
Sbjct: 410 TGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMRE 469
Query: 393 LMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALL 434
M K+ ++K+ G S +++ + F++ ++ + +K+ A+L
Sbjct: 470 AMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVL 511
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 9/171 (5%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIP-SDRFT 60
Y + G + AR VFDE ER + W++ G + LE++ QM G ++ T
Sbjct: 184 YAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVT 243
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
V+ AC + L +GK +H IL + + T+L+D+YAK G I A SVF
Sbjct: 244 MVSVICACA----HLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVF 299
Query: 121 RAMPAK--NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMV 169
K +++ W+A+IG A + ++L+LFH+M D P+ +T +
Sbjct: 300 YRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKID--PDEITFL 348
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 106/245 (43%), Gaps = 36/245 (14%)
Query: 83 EIHANILRHGY-EENIHVMTTL-LDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAK 140
+IH ++ G EE V TL + G + YA + + W+ +I ++
Sbjct: 26 KIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSN 85
Query: 141 NDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIM 200
+ P K++ ++ QM+ +P+ +T + +H +++ GL+ +
Sbjct: 86 SRNPEKSISVYIQMLRFGL--LPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDL 143
Query: 201 PVINALITMYG-------------------------------RCGEISIGERVFDKVKNP 229
+ N LI MYG + G++ VFD++
Sbjct: 144 FICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSER 203
Query: 230 DVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSY-ISFITVLCACSHAGLVEEGKIL 288
DVV+W+S+I Y G KA++IF+ M+ G S + ++ ++V+CAC+H G + GK +
Sbjct: 204 DVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTV 263
Query: 289 FESML 293
+L
Sbjct: 264 HRYIL 268
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 131/411 (31%), Positives = 214/411 (52%), Gaps = 10/411 (2%)
Query: 1 MYHELGSLDCARKVFDETR---ERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSD 57
MY GSL A VF + + ++ +WN+ + E L L Q+ S + D
Sbjct: 282 MYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFD 341
Query: 58 RFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYAN 117
+T + LK C+ + L+ G ++H+ ++ GYE + V + L+D++A G I A+
Sbjct: 342 SYTLSGALKICI----NYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAH 397
Query: 118 SVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXX 177
+F +P K+ +++S +I K+ A LF +++ D+ + + ++
Sbjct: 398 KLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDA--DQFIVSNILKVCSS 455
Query: 178 XXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSL 237
+HG +++G +S AL+ MY +CGEI G +FD + DVVSW +
Sbjct: 456 LASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGI 515
Query: 238 ISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYR 297
I +G NG ++A + F MI+ G+ P+ ++F+ +L AC H+GL+EE + E+M S+Y
Sbjct: 516 IVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYG 575
Query: 298 IHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERAS 357
+ P +EHY C+VDLLG+A EA +LI MP EP T+W SLL +C H NA L +
Sbjct: 576 LEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIA 635
Query: 358 AMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWI 408
L + P + Y L++ YA MW + VR+ K++ K G SWI
Sbjct: 636 EKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVRE-AAKKLGAKESGMSWI 685
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 118/273 (43%), Gaps = 36/273 (13%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM-NWSGIPSDRF 59
MY + L A KVFDE ER I W G+ + +ELYR+M + ++ F
Sbjct: 49 MYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEF 108
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
Y+ VLKAC + V +Q G ++ I + ++ +M +++D+Y K G + ANS
Sbjct: 109 MYSAVLKACGL----VGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSS 164
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDS----IPNSVTMVSVXXXX 175
F+ + +S SW+ +I Y K + +A+ LFH+M S I V S
Sbjct: 165 FKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALE 224
Query: 176 XXXXXXXXXXXVHGF------------------------ILRRGLDSIMPVINALITMYG 211
+ GF +++ GL+S I+ALI MY
Sbjct: 225 FLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYS 284
Query: 212 RCGEISIGERVFDKVK---NPDVVSWNSLISMY 241
CG + VF + K N V WNS++S +
Sbjct: 285 NCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGF 317
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 128/311 (41%), Gaps = 34/311 (10%)
Query: 75 VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAM 134
V ++G+ I A++++ G +N+ + ++ +Y F +S A+ VF M +N V+W+ M
Sbjct: 18 VQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTM 77
Query: 135 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 194
+ Y + P KA+EL+ +M L++ + N +V V+ I +
Sbjct: 78 VSGYTSDGKPNKAIELYRRM-LDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKE 136
Query: 195 GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIF 254
L + ++N+++ MY + G + F ++ P SWN+LIS Y G +A+ +F
Sbjct: 137 NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLF 196
Query: 255 ENMIHQGV--------------SPSYISFITV----------------LCACSHAGLVEE 284
M V SP + F+ L ACS GL+
Sbjct: 197 HRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTM 256
Query: 285 GKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLI--EDMPFEPGPTVWGSLLG 342
GK L + K + + ++D+ L A + E + VW S+L
Sbjct: 257 GKQL-HCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLS 315
Query: 343 SCRIHCNAELA 353
I+ E A
Sbjct: 316 GFLINEENEAA 326
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 222 bits (565), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 137/469 (29%), Positives = 224/469 (47%), Gaps = 39/469 (8%)
Query: 16 DETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSV 75
+++ T W + L GR E + + M +G+ + T+ +L C +F+
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGC--GDFTS 86
Query: 76 YPLQKGKEIHANILRHGYEENIHVM---------------------------------TT 102
G +H + G + N HVM T
Sbjct: 87 GSEALGDLLHGYACKLGLDRN-HVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNT 145
Query: 103 LLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI 162
++D Y + G + A +F MP ++ +SW+AMI + K +AL F +M +
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK-- 203
Query: 163 PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERV 222
P+ V +++ VH ++L + + + V N+LI +Y RCG + +V
Sbjct: 204 PDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQV 263
Query: 223 FDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLV 282
F ++ VVSWNS+I + NG +++ F M +G P ++F L ACSH GLV
Sbjct: 264 FYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLV 323
Query: 283 EEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLG 342
EEG F+ M YRI P +EHY C+VDL RA RL++A+KL++ MP +P V GSLL
Sbjct: 324 EEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLA 383
Query: 343 SCRIHCNA-ELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQK 401
+C H N LAER L +L + NYV+L+++YA W +R+ M L+K
Sbjct: 384 ACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKK 443
Query: 402 VPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKEQGYAPQT 450
PG S IE+ ++ F++ + + + +R +L +S++++ QG +T
Sbjct: 444 QPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 119/284 (41%), Gaps = 49/284 (17%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y G +D A K+FD+ ER + W A G EE L +R+M SG+ D
Sbjct: 150 YMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAI 209
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
L AC ++ L G +H +L ++ N+ V +L+D+Y + GC+ +A VF
Sbjct: 210 IAALNACT----NLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFY 265
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
M + VSW+++I +A N ++L F +M + P++VT
Sbjct: 266 NMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFK--PDAVTFTGA---------- 313
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK-----NPDVVSWNS 236
+T G + G R F +K +P + +
Sbjct: 314 -------------------------LTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGC 348
Query: 237 LISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAG 280
L+ +Y G + A+++ ++M + P+ + ++L ACS+ G
Sbjct: 349 LVDLYSRAGRLEDALKLVQSM---PMKPNEVVIGSLLAACSNHG 389
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 7/128 (5%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y G ++ AR+VF +RT+ WN+ A G E L +R+M G D T
Sbjct: 250 LYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVT 309
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYE--ENIHVMTTLLDVYAKFGCISYANS 118
+T L AC V +++G + I++ Y I L+D+Y++ G + A
Sbjct: 310 FTGALTACS----HVGLVEEGLR-YFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALK 364
Query: 119 VFRAMPAK 126
+ ++MP K
Sbjct: 365 LVQSMPMK 372
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 222 bits (565), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 210/411 (51%), Gaps = 9/411 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G + AR+VF+E + +W A G E L L+++M I + T
Sbjct: 286 MYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVT 345
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
VL C + E L+ G+ +H ++ G + +V L+ +YAK A VF
Sbjct: 346 IASVLSGCGLIE----NLELGRSVHGLSIKVGIWDT-NVANALVHMYAKCYQNRDAKYVF 400
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
K+ V+W+++I +++N +AL LFH+M E+ PN VT+ S+
Sbjct: 401 EMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESV--TPNGVTVASLFSACASLGS 458
Query: 181 XXXXXXVHGFILRRGL--DSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
+H + ++ G S + V AL+ Y +CG+ +FD ++ + ++W+++I
Sbjct: 459 LAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMI 518
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 298
YG G ++++FE M+ + P+ +F ++L AC H G+V EGK F SM Y
Sbjct: 519 GGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNF 578
Query: 299 HPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASA 358
P +HY CMVD+L RA L++A+ +IE MP +P +G+ L C +H +L E
Sbjct: 579 TPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIK 638
Query: 359 MLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIE 409
+ +L P +A YVL++++YA W+ K VR LM +R L K+ G S +E
Sbjct: 639 KMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 144/283 (50%), Gaps = 10/283 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y G AR VFD+ E Y+W R + E+++LY + G D
Sbjct: 85 LYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIV 144
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
++ LKAC + L GK+IH +++ +N+ V+T LLD+YAK G I A+ VF
Sbjct: 145 FSKALKACT----ELQDLDNGKKIHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVF 199
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+ +N V W++MI Y KND+ + L LF++M + + N T ++
Sbjct: 200 NDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRM--RENNVLGNEYTYGTLIMACTKLSA 257
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
HG +++ G++ ++ +L+ MY +CG+IS RVF++ + D+V W ++I
Sbjct: 258 LHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVG 317
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVE 283
Y +NG +A+ +F+ M + P+ ++ +VL C GL+E
Sbjct: 318 YTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC---GLIE 357
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 139/350 (39%), Gaps = 38/350 (10%)
Query: 82 KEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKN 141
++ H + +G +I + T L+ +Y FG A VF +P + W M+ CY N
Sbjct: 61 RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLN 120
Query: 142 DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR-RGLDSIM 200
V+ ++L+ ++ + + +H +++ D++
Sbjct: 121 KESVEVVKLYDLLMKHGFRY--DDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV- 177
Query: 201 PVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQ 260
V+ L+ MY +CGEI +VF+ + +VV W S+I+ Y N ++ + +F M
Sbjct: 178 -VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMREN 236
Query: 261 GVSPSYISFITVLCACSHAGLVEEGK---------------ILFESMLSKY--------- 296
V + ++ T++ AC+ + +GK L S+L Y
Sbjct: 237 NVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNA 296
Query: 297 -RI-----HPGMEHYACMVDLLGRANRLDEAIKLIEDMP---FEPGPTVWGSLLGSCRIH 347
R+ H + + M+ ++EA+ L + M +P S+L C +
Sbjct: 297 RRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLI 356
Query: 348 CNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKR 397
N EL + ++ W+ L +YA+ D K V ++ ++
Sbjct: 357 ENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEK 406
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 222 bits (565), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 130/403 (32%), Positives = 209/403 (51%), Gaps = 10/403 (2%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM--NWSGIPSDRFTYTYVLKAC 68
AR+VFD ++ W+A +E E++ QM N + +L C
Sbjct: 259 ARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGC 318
Query: 69 VVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNS 128
+ F L G+ +H ++ G+ ++ V T++ YAK+G + A F + K+
Sbjct: 319 --ARFG--DLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDV 374
Query: 129 VSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVH 188
+S++++I N P ++ LFH+M P+ T++ V H
Sbjct: 375 ISYNSLITGCVVNCRPEESFRLFHEMRTSGIR--PDITTLLGVLTACSHLAALGHGSSCH 432
Query: 189 GFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGK 248
G+ + G + NAL+ MY +CG++ + +RVFD + D+VSWN+++ +G +G GK
Sbjct: 433 GYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGK 492
Query: 249 KAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESM-LSKYRIHPGMEHYAC 307
+A+ +F +M GV+P ++ + +L ACSH+GLV+EGK LF SM + + P ++HY C
Sbjct: 493 EALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNC 552
Query: 308 MVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWN 367
M DLL RA LDEA + MPFEP V G+LL +C + NAEL S + L
Sbjct: 553 MTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGE-T 611
Query: 368 AGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEV 410
+ VLL++ Y+ A+ W D +R + KR L K PG SW++V
Sbjct: 612 TESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 166/348 (47%), Gaps = 9/348 (2%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMN-WSGIPSDRFT 60
Y + G L+ A KVFDE +R + WNA ++ +++ L+ M G+ + T
Sbjct: 148 YAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLST 207
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ A + L++GK +H R G+ ++ V T +LDVYAK CI YA VF
Sbjct: 208 IVGMFPALGRAG----ALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVF 263
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
KN V+WSAMIG Y +N+M +A E+F QM++ ++ V + +
Sbjct: 264 DLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGD 323
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
VH + ++ G + V N +I+ Y + G + R F ++ DV+S+NSLI+
Sbjct: 324 LSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITG 383
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFE-SMLSKYRIH 299
N +++ ++F M G+ P + + VL ACSH + G ++ Y ++
Sbjct: 384 CVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVN 443
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 347
+ + ++D+ + +LD A ++ + M + W ++L IH
Sbjct: 444 TSICN--ALMDMYTKCGKLDVAKRVFDTM-HKRDIVSWNTMLFGFGIH 488
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 141/304 (46%), Gaps = 22/304 (7%)
Query: 1 MYHELGSLDCARKVFDETRERTI--YIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDR 58
+Y ++ AR VFDE I W+ RA A E+ L+LY +M SG+ +
Sbjct: 44 LYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTK 103
Query: 59 FTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANS 118
+TY +VLKAC + + GK IH+++ + +++V T L+D YAK G + A
Sbjct: 104 YTYPFVLKACA----GLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIK 159
Query: 119 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI-PNSVTMVSVXXXXXX 177
VF MP ++ V+W+AMI ++ + + LF M D + PN T+V +
Sbjct: 160 VFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDM--RRIDGLSPNLSTIVGMFPALGR 217
Query: 178 XXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSL 237
VHG+ R G + + V ++ +Y + I RVFD + V+W+++
Sbjct: 218 AGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAM 277
Query: 238 ISMYGNNGYGKKAIQIFENMIHQG----VSPSYISFITVLCA---------CSHAGLVEE 284
I Y N K+A ++F M+ V+P I I + CA C H V+
Sbjct: 278 IGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKA 337
Query: 285 GKIL 288
G IL
Sbjct: 338 GFIL 341
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 87/165 (52%), Gaps = 5/165 (3%)
Query: 187 VHGFILRRGLD-SIMPVINALITMYGRCGEISIGERVFDKVKNPDV--VSWNSLISMYGN 243
+H +L+R L S V+ L +Y C E+ + VFD++ +P + ++W+ +I Y +
Sbjct: 21 IHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYAS 80
Query: 244 NGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGME 303
N + +KA+ ++ M++ GV P+ ++ VL AC+ +++GK L S ++ M
Sbjct: 81 NDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK-LIHSHVNCSDFATDMY 139
Query: 304 HYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHC 348
+VD + L+ AIK+ ++MP + W +++ +HC
Sbjct: 140 VCTALVDFYAKCGELEMAIKVFDEMP-KRDMVAWNAMISGFSLHC 183
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 6/126 (4%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G LD A++VFD +R I WN + G G+E L L+ M +G+ D T
Sbjct: 453 MYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVT 512
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYE--ENIHVMTTLLDVYAKFGCISYANS 118
+L AC S + +GK++ ++ R + I + D+ A+ G + A
Sbjct: 513 LLAILSACSHSGL----VDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYD 568
Query: 119 VFRAMP 124
MP
Sbjct: 569 FVNKMP 574
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 225/440 (51%), Gaps = 16/440 (3%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGR---GEELLELYRQMNWSGIPSDRFTYTYVLKA 67
A +FD ++++ R + + G L + I T+ +++ A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVA 125
Query: 68 CVVSEFSVYPLQKGKEIHANILRHG-YEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK 126
C+ + F GK+IH ++++G + + HV T +L +Y + + A VF +P
Sbjct: 126 CLKACF----FSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQP 181
Query: 127 NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXX 186
+ V W ++ Y + + + LE+F +M+++ + P+ ++ +
Sbjct: 182 DVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLE--PDEFSVTTALTACAQVGALAQGKW 239
Query: 187 VHGFILRRG-LDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNG 245
+H F+ ++ ++S + V AL+ MY +CG I VF K+ +V SW +LI Y G
Sbjct: 240 IHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYG 299
Query: 246 YGKKAIQIFENMIHQ-GVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 304
Y KKA+ E + + G+ P + + VL AC+H G +EEG+ + E+M ++Y I P EH
Sbjct: 300 YAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEH 359
Query: 305 YACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELE 364
Y+C+VDL+ RA RLD+A+ LIE MP +P +VWG+LL CR H N EL E A L +LE
Sbjct: 360 YSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLE 419
Query: 365 PWNA----GNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 420
N V L++IY + + VR ++ +R ++K PG S +EV + FVS
Sbjct: 420 KGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSG 479
Query: 421 EEDNPQIEKLRALLIKLSTE 440
+ +P + ++ ++ LS +
Sbjct: 480 DVSHPNLLQIHTVIHLLSVD 499
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 131/283 (46%), Gaps = 7/283 (2%)
Query: 66 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCIS----YANSVFR 121
K+ +++ +++ K H+ + HG N + ++ LL + ++ YA+S+F
Sbjct: 12 KSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFD 71
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI-PNSVTMVSVXXXXXXXXX 180
++ NS + MI +++ P L F MV E + I P+ +T +
Sbjct: 72 SIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACF 131
Query: 181 XXXXXXVHGFILRRGLD-SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+H ++++ G+ S V ++ +Y + +VFD++ PDVV W+ L++
Sbjct: 132 FSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMN 191
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
Y G G + +++F M+ +G+ P S T L AC+ G + +GK + E + K I
Sbjct: 192 GYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIE 251
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLG 342
+ +VD+ + ++ A+++ + + W +L+G
Sbjct: 252 SDVFVGTALVDMYAKCGCIETAVEVFKKLT-RRNVFSWAALIG 293
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 128/397 (32%), Positives = 214/397 (53%), Gaps = 10/397 (2%)
Query: 14 VFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNW--SGIPSDRFTYTYVLKACVVS 71
VF R I+ WN + G + ++L+ +M W S + D FT +L+AC S
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM-WRESCVRPDDFTLPLILRACSAS 147
Query: 72 EFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSW 131
+ + G IH L+ G+ ++ V + L+ +Y G + +A +F MP ++SV +
Sbjct: 148 REA----KSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLY 203
Query: 132 SAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFI 191
+AM G Y + + L +F +M +SV MVS+ VHG+
Sbjct: 204 TAMFGGYVQQGEAMLGLAMFREMGYSGF--ALDSVVMVSLLMACGQLGALKHGKSVHGWC 261
Query: 192 LRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAI 251
+RR + + NA+ MY +C + VF + DV+SW+SLI YG +G +
Sbjct: 262 IRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSF 321
Query: 252 QIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDL 311
++F+ M+ +G+ P+ ++F+ VL AC+H GLVE+ + F ++ +Y I P ++HYA + D
Sbjct: 322 KLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFR-LMQEYNIVPELKHYASVADC 380
Query: 312 LGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNY 371
+ RA L+EA K +EDMP +P V G++L C+++ N E+ ER + L +L+P A Y
Sbjct: 381 MSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYY 440
Query: 372 VLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWI 408
V LA +Y+ A + + +S+R+ M ++ + KVPGCS I
Sbjct: 441 VTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 6/171 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY ++G L ARK+FD+ R ++ A F G L ++R+M +SG D
Sbjct: 178 MYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVV 237
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+L AC + L+ GK +H +R +++ + D+Y K + YA++VF
Sbjct: 238 MVSLLMACG----QLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVF 293
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 171
M ++ +SWS++I Y + V + +LF +M+ E + PN+VT + V
Sbjct: 294 VNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIE--PNAVTFLGV 342
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 91/193 (47%), Gaps = 2/193 (1%)
Query: 95 ENIHVMTTLLDVYAKFG-CISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQ 153
N+ + + L+ Y+K + SVF MP +N SW+ +IG ++++ K+++LF +
Sbjct: 64 SNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLR 123
Query: 154 MVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRC 213
M E+C P+ T+ + +H L+ G S + V +AL+ MY
Sbjct: 124 MWRESCVR-PDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDM 182
Query: 214 GEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVL 273
G++ ++FD + D V + ++ Y G + +F M + G + + +++L
Sbjct: 183 GKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLL 242
Query: 274 CACSHAGLVEEGK 286
AC G ++ GK
Sbjct: 243 MACGQLGALKHGK 255
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 181/317 (57%), Gaps = 1/317 (0%)
Query: 101 TTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACD 160
T++D YAK G + +A ++F MP ++ V++++M+ Y +N ++ALE+F M E+
Sbjct: 287 ATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKES-H 345
Query: 161 SIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGE 220
+P+ T+V V +H +I+ + + ALI MY +CG I
Sbjct: 346 LLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAM 405
Query: 221 RVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAG 280
VF+ ++N + WN++I +G G+ A + + + P I+F+ VL ACSH+G
Sbjct: 406 LVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSG 465
Query: 281 LVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSL 340
LV+EG + FE M K++I P ++HY CMVD+L R+ ++ A LIE+MP EP +W +
Sbjct: 466 LVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTF 525
Query: 341 LGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQ 400
L +C H E E + L +N +YVLL+++YA MW DV+ VR +M +R ++
Sbjct: 526 LTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIE 585
Query: 401 KVPGCSWIEVKKKIYSF 417
K+PGCSWIE+ +++ F
Sbjct: 586 KIPGCSWIELDGRVHEF 602
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 170/366 (46%), Gaps = 34/366 (9%)
Query: 24 YIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKE 83
++WNA ++ + + L L M +G+ D+F+ + VLKAC F ++ G +
Sbjct: 87 FLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGF----VKGGMQ 142
Query: 84 IHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDM 143
IH + + G ++ + L+ +Y K GC+ + +F MP ++SVS+++MI Y K +
Sbjct: 143 IHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGL 202
Query: 144 PVKALELFHQMVLEACDSI------------PNSVTMVS-VXXXXXXXXXXXXXXXVHGF 190
V A ELF M +E + I + V + S + + G+
Sbjct: 203 IVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGY 262
Query: 191 ILR------RGLDSIMPVIN-----ALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+ +GL +MP + +I Y + G + + +FD++ + DVV++NS+++
Sbjct: 263 VKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMA 322
Query: 240 MYGNNGYGKKAIQIFENMIHQG-VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 298
Y N Y +A++IF +M + + P + + VL A + G + + + ++ K +
Sbjct: 323 GYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEK-QF 381
Query: 299 HPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASA 358
+ G + ++D+ + + A+ + E + W +++G IH L E A
Sbjct: 382 YLGGKLGVALIDMYSKCGSIQHAMLVFEGIE-NKSIDHWNAMIGGLAIH---GLGESAFD 437
Query: 359 MLFELE 364
ML ++E
Sbjct: 438 MLLQIE 443
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 128/301 (42%), Gaps = 42/301 (13%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM-NWSGIPSDRFT 60
Y +LG + A+ +FD+ R + +N+ E LE++ M S + D T
Sbjct: 293 YAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTT 352
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
VL A + L K ++H I+ + + L+D+Y+K G I +A VF
Sbjct: 353 LVIVLPAIA----QLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVF 408
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+ K+ W+AMIG A + + A ++ Q +E P+ +T V V
Sbjct: 409 EGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQ--IERLSLKPDDITFVGVLNACS---- 462
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
H +++ GL C E+ R K++ P + + ++ +
Sbjct: 463 -------HSGLVKEGL---------------LCFELM---RRKHKIE-PRLQHYGCMVDI 496
Query: 241 YGNNGYGKKAIQIFENMIHQ-GVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
+G +I++ +N+I + V P+ + + T L ACSH E G+++ + ++ + +
Sbjct: 497 LSRSG----SIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYN 552
Query: 300 P 300
P
Sbjct: 553 P 553
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 8/138 (5%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + GS+ A VF+ ++I WNA LA+ G GE ++ Q+ + D T
Sbjct: 394 MYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDIT 453
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILR--HGYEENIHVMTTLLDVYAKFGCISYANS 118
+ VL AC S L K + ++R H E + ++D+ ++ G I A +
Sbjct: 454 FVGVLNAC-----SHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKN 508
Query: 119 VFRAMPAK-NSVSWSAMI 135
+ MP + N V W +
Sbjct: 509 LIEEMPVEPNDVIWRTFL 526
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 128/407 (31%), Positives = 211/407 (51%), Gaps = 9/407 (2%)
Query: 1 MYHELGSLDCARKVFDE-TRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRF 59
MY + L A K+F + E WN + + + +EL+R++ GI D
Sbjct: 375 MYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSA 434
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
+ T V+ +C + + GK +H +++ + I V+ +L+D+Y K G ++ A +
Sbjct: 435 SATSVISSCS----HIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRM 490
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F N ++W+AMI Y + KA+ LF +MV E + P+S+T+V++
Sbjct: 491 F-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSE--NFKPSSITLVTLLMACVNTG 547
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+H +I + + + ALI MY +CG + +FD D V WN +IS
Sbjct: 548 SLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMIS 607
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
YG +G + AI +F+ M V P+ +F+ +L AC+HAGLVE+GK LF M +Y +
Sbjct: 608 GYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKM-HQYDVK 666
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAM 359
P ++HY+C+VDLL R+ L+EA + MPF P +WG+LL SC H E+ R +
Sbjct: 667 PNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAER 726
Query: 360 LFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCS 406
+P N G Y++LA++Y+ A W + + R++M + + K G S
Sbjct: 727 AVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHS 773
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 166/363 (45%), Gaps = 16/363 (4%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDR--- 58
Y + G L A VFDE +R + W A G E L +M+ +G D+
Sbjct: 171 YSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNP 230
Query: 59 FTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANS 118
T +AC ++ L++G+ +H +++G + V +++ Y+K G S A
Sbjct: 231 RTLECGFQACS----NLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYL 286
Query: 119 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
FR + ++ SW+++I A++ ++ ++F +M + P+ V + +
Sbjct: 287 SFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMH--PDGVVISCLINELGKM 344
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKV-KNPDVVSWNSL 237
HGF++R V N+L++MY + +S+ E++F ++ + + +WN++
Sbjct: 345 MLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTM 404
Query: 238 ISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYR 297
+ YG K I++F + + G+ S +V+ +CSH G V GK L + K
Sbjct: 405 LKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSL-HCYVVKTS 463
Query: 298 IHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERAS 357
+ + ++DL G+ L A ++ + + W +++ S +HC E +E+A
Sbjct: 464 LDLTISVVNSLIDLYGKMGDLTVAWRMFCEA--DTNVITWNAMIAS-YVHC--EQSEKAI 518
Query: 358 AML 360
A+
Sbjct: 519 ALF 521
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 125/287 (43%), Gaps = 6/287 (2%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y G + + +VF R I++WN+ +A G L + M SG D FT
Sbjct: 69 YASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTA 128
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRH-GYEENIHVMTTLLDVYAKFGCISYANSVF 120
V+ AC + G +H +L+H G++ N V + + Y+K G + A VF
Sbjct: 129 PMVVSACA----ELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVF 184
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACD-SIPNSVTMVSVXXXXXXXX 179
MP ++ V+W+A+I + +N L +M D PN T+
Sbjct: 185 DEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLG 244
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+HGF ++ GL S V +++ + Y + G S F ++ + D+ SW S+I+
Sbjct: 245 ALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIA 304
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGK 286
+G +++ +F M ++G+ P + ++ LV +GK
Sbjct: 305 SLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGK 351
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 6/215 (2%)
Query: 78 LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGC 137
L+ ++ +A I+ G ENI V + L+ YA +G + ++ VF + ++ W+++I
Sbjct: 40 LESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKA 99
Query: 138 YAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR-GL 196
+ N ++L F M+L P+ T V VHG +L+ G
Sbjct: 100 HFSNGDYARSLCFFFSMLLSG--QSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGF 157
Query: 197 DSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFEN 256
D V + + Y +CG + VFD++ + DVV+W ++IS + NG + +
Sbjct: 158 DRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCK 217
Query: 257 MIHQGVSPSYISFITVLC---ACSHAGLVEEGKIL 288
M G + T+ C ACS+ G ++EG+ L
Sbjct: 218 MHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCL 252
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 225/443 (50%), Gaps = 16/443 (3%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGR---GEELLELYRQMNWSGIPSDRFTYTYVLKA 67
A +FD ++++ R + + G L + I T+ +++ A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVA 125
Query: 68 CVVSEFSVYPLQKGKEIHANILRHG-YEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK 126
C+ + F GK+IH ++++G + + HV T +L +Y + + A VF +P
Sbjct: 126 CLKACF----FSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQP 181
Query: 127 NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXX 186
+ V W ++ Y + + + LE+F +M++ + P+ ++ +
Sbjct: 182 DVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIE--PDEFSVTTALTACAQVGALAQGKW 239
Query: 187 VHGFILR-RGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNG 245
+H F+ + R ++S + V AL+ MY +CG I VF+K+ +V SW +LI Y G
Sbjct: 240 IHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYG 299
Query: 246 YGKKAIQIFENMIHQ-GVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 304
Y KKA + + + G+ P + + VL AC+H G +EEG+ + E+M ++Y I P EH
Sbjct: 300 YAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEH 359
Query: 305 YACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELE 364
Y+C+VDL+ RA RLD+A+ LIE MP +P +VWG+LL CR H N EL E A L +LE
Sbjct: 360 YSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLE 419
Query: 365 PWNA----GNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 420
N V L++IY + + VR ++ +R ++K PG S +EV + FVS
Sbjct: 420 KGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSG 479
Query: 421 EEDNPQIEKLRALLIKLSTEMKE 443
+ +P + ++ L+ LS + +
Sbjct: 480 DVSHPNLLQIHTLIHLLSVDASQ 502
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 132/283 (46%), Gaps = 7/283 (2%)
Query: 66 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCIS----YANSVFR 121
K+ +++ +++ K H+ + HG N + ++ LL + ++ YA+S+F
Sbjct: 12 KSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFD 71
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI-PNSVTMVSVXXXXXXXXX 180
++ NS + MI +++ P L F MV E + I P+ +T +
Sbjct: 72 SIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACF 131
Query: 181 XXXXXXVHGFILRRGLD-SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+H ++++ G+ S V ++ +Y + +VFD++ PDVV W+ L++
Sbjct: 132 FSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMN 191
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
Y G G + +++F+ M+ +G+ P S T L AC+ G + +GK + E + K I
Sbjct: 192 GYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIE 251
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLG 342
+ +VD+ + ++ A+++ E + W +L+G
Sbjct: 252 SDVFVGTALVDMYAKCGCIETAVEVFEKLT-RRNVFSWAALIG 293
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 131/432 (30%), Positives = 216/432 (50%), Gaps = 14/432 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIP-SDRF 59
MY G + A VF + WN+ + G GE+ + +YR++ P D +
Sbjct: 344 MYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEY 403
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
T++ + A E V+ GK +H + + GYE ++ V TTLL +Y K A V
Sbjct: 404 TFSAAISATAEPERFVH----GKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKV 459
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F M ++ V W+ MI +++ A++ F +M E S + ++ SV
Sbjct: 460 FDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRS--DGFSLSSVIGACSDMA 517
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
H +R G D +M V AL+ MYG+ G+ E +F NPD+ WNS++
Sbjct: 518 MLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLG 577
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
Y +G +KA+ FE ++ G P ++++++L ACSH G +GK L+ M + I
Sbjct: 578 AYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQM-KEQGIK 636
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPG---PTVWGSLLGSCRIHCNAELAERA 356
G +HY+CMV+L+ +A +DEA++LIE P PG +W +LL +C N ++ A
Sbjct: 637 AGFKHYSCMVNLVSKAGLVDEALELIEQSP--PGNNQAELWRTLLSACVNTRNLQIGLYA 694
Query: 357 SAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEV-KKKIY 415
+ + +L+P + ++LL+++YA W DV +R+ + K PG SWIEV
Sbjct: 695 AEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQ 754
Query: 416 SFVSSEEDNPQI 427
F S ++ NP++
Sbjct: 755 VFSSGDQSNPEV 766
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 163/392 (41%), Gaps = 18/392 (4%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEEL------LELYRQMNWSGI 54
MY SL+ ARKVFD+ +R I V G L L ++ + + +
Sbjct: 31 MYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMIFFMPL 90
Query: 55 PSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGY---EENIHVMTTLLDVYAKFG 111
+ + + CV S+ L++ ++IHA +L G E+ + L+ +Y + G
Sbjct: 91 NEIASSVVELTRKCV----SITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCG 146
Query: 112 CISYANSVFRAMPAKNSVSWSAMIGCYAKN-DMPVKALELFHQMVLEACDSIPNSVTMVS 170
+ A VF MP +N VS++A+ Y++N D A L M E PNS T S
Sbjct: 147 SLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVK--PNSSTFTS 204
Query: 171 VXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPD 230
+ ++ I++ G + V +++ MY CG++ R+FD V N D
Sbjct: 205 LVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRD 264
Query: 231 VVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFE 290
V+WN++I N + + F NM+ GV P+ ++ VL CS G GK++
Sbjct: 265 AVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHA 324
Query: 291 SMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNA 350
++ + + ++D+ + EA + + P W S++ C +
Sbjct: 325 RIIVSDSL-ADLPLDNALLDMYCSCGDMREAFYVFGRI-HNPNLVSWNSIISGCSENGFG 382
Query: 351 ELAERASAMLFELEPWNAGNYVLLADIYAEAK 382
E A L + Y A I A A+
Sbjct: 383 EQAMLMYRRLLRMSTPRPDEYTFSAAISATAE 414
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 128/403 (31%), Positives = 203/403 (50%), Gaps = 36/403 (8%)
Query: 37 GRGEELLELYRQMNWS-GIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEE 95
G E+ L L+ QM+ S +P D ++ LK+C + V G +HA+ ++ +
Sbjct: 26 GNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVL----GGSVHAHSVKSNFLS 81
Query: 96 NIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMV 155
N V LLD+Y K +S+A +F +P +N+V W+AMI Y +A+EL+ M
Sbjct: 82 NPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMD 141
Query: 156 LEACDSI-------------------------------PNSVTMVSVXXXXXXXXXXXXX 184
+ +S PN +T++++
Sbjct: 142 VMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLI 201
Query: 185 XXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNN 244
+H + R ++ + + L+ YGRCG I + VFD +++ DVV+W+SLIS Y +
Sbjct: 202 KEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALH 261
Query: 245 GYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 304
G + A++ F+ M V+P I+F+ VL ACSHAGL +E + F+ M Y + +H
Sbjct: 262 GDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDH 321
Query: 305 YACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELE 364
Y+C+VD+L R R +EA K+I+ MP +P WG+LLG+CR + ELAE A+ L +E
Sbjct: 322 YSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVE 381
Query: 365 PWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSW 407
P N NYVLL IY + + +R M + ++ PG SW
Sbjct: 382 PENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 4/136 (2%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y GS+ + VFD +R + W++ A A+ G E L+ +++M + + D +
Sbjct: 227 YGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAF 286
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
VLKAC + + L K + + +G + + L+DV ++ G A V +
Sbjct: 287 LNVLKACSHAGLADEALVYFKRMQGD---YGLRASKDHYSCLVDVLSRVGRFEEAYKVIQ 343
Query: 122 AMPAKNSV-SWSAMIG 136
AMP K + +W A++G
Sbjct: 344 AMPEKPTAKTWGALLG 359
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 137/409 (33%), Positives = 211/409 (51%), Gaps = 17/409 (4%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y + L ARKVF E ER W A A G EE ++ M + S +
Sbjct: 155 YGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGS----W 210
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHAN-ILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
++ V S G ++A + + +I T+++D YAK G + A +F
Sbjct: 211 NALVDGLVKS---------GDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLF 261
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+ +WSA+I YA+N P +A ++F +M A + P+ MV +
Sbjct: 262 EEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMC--AKNVKPDEFIMVGLMSACSQMGC 319
Query: 181 XXXXXXVHGFILRR-GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
V ++ +R S V+ ALI M +CG + ++F+++ D+VS+ S++
Sbjct: 320 FELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMME 379
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
+G G +AI++FE M+ +G+ P ++F +L C + LVEEG FE M KY I
Sbjct: 380 GMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSIL 439
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAM 359
+HY+C+V+LL R +L EA +LI+ MPFE + WGSLLG C +H N E+AE +
Sbjct: 440 ASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARH 499
Query: 360 LFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWI 408
LFELEP +AG+YVLL++IYA W+DV +R M + + K+ G SWI
Sbjct: 500 LFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 149/321 (46%), Gaps = 23/321 (7%)
Query: 14 VFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIP-SDRFTYTYVLKACVVSE 72
VF+ Y+WN + + E + + +M +G+ D +T+ V+K C +
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 73 FSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWS 132
++ G +H +LR G+++++ V T+ +D Y K + A VF MP +N+VSW+
Sbjct: 125 ----QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWT 180
Query: 133 AMIGCYAKNDMPVKALELFHQMVLEACDSIP--NSVTMVSVXXXXXXXXXXXXXXXVHGF 190
A++ Y K+ +A +F D +P N + ++ +
Sbjct: 181 ALVVAYVKSGELEEAKSMF--------DLMPERNLGSWNALVDGLVKSGDLVNAKKLFDE 232
Query: 191 ILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKA 250
+ +R + S +I+ Y + G++ +F++ + DV +W++LI Y NG +A
Sbjct: 233 MPKRDIISYTSMIDG----YAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEA 288
Query: 251 IQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA--CM 308
++F M + V P + ++ ACS G E + + +S L + R++ HY +
Sbjct: 289 FKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKV-DSYLHQ-RMNKFSSHYVVPAL 346
Query: 309 VDLLGRANRLDEAIKLIEDMP 329
+D+ + +D A KL E+MP
Sbjct: 347 IDMNAKCGHMDRAAKLFEEMP 367
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 109/246 (44%), Gaps = 11/246 (4%)
Query: 83 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANS-VFRAMPAKNSVSWSAMIGCYAKN 141
+IHA I+R G E++ ++++ + + +S VF +P+ + W+ +I Y+
Sbjct: 28 QIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLIKGYSNK 87
Query: 142 DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMP 201
+ + + + +M+ + P+ T V VHG +LR G D +
Sbjct: 88 FLFFETVSILMRMMRTGL-ARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVV 146
Query: 202 VINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG 261
V + + YG+C ++ +VF ++ + VSW +L+ Y +G ++A +F+ M +
Sbjct: 147 VGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERN 206
Query: 262 VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEA 321
+ S+ ++ +G + K LF+ M + I Y M+D + + A
Sbjct: 207 LG----SWNALVDGLVKSGDLVNAKKLFDEMPKRDII-----SYTSMIDGYAKGGDMVSA 257
Query: 322 IKLIED 327
L E+
Sbjct: 258 RDLFEE 263
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 128/412 (31%), Positives = 216/412 (52%), Gaps = 19/412 (4%)
Query: 8 LDCARKVFDETRERTIYIWNAFFRALAMVGRGEEL---LELYRQMNWSG---IPSDRFTY 61
L A + + +++++N ++ + LY Q+ S + + FTY
Sbjct: 56 LSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTY 115
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILR--HGYEENIHVMTTLLDVYAKFGCISYANSV 119
+ KA S F + G+ +HA++L+ + V L+ YA G + A S+
Sbjct: 116 PSLFKA---SGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSL 172
Query: 120 FRAMPAKNSVSWSAMIGCYAKN---DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXX 176
F + + +W+ ++ YA + D + L LF +M + PN +++V++
Sbjct: 173 FERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVR-----PNELSLVALIKSCA 227
Query: 177 XXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNS 236
H ++L+ L V +LI +Y +CG +S +VFD++ DV +N+
Sbjct: 228 NLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNA 287
Query: 237 LISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKY 296
+I +G+G++ I++++++I QG+ P +F+ + ACSH+GLV+EG +F SM + Y
Sbjct: 288 MIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVY 347
Query: 297 RIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERA 356
I P +EHY C+VDLLGR+ RL+EA + I+ MP +P T+W S LGS + H + E E A
Sbjct: 348 GIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIA 407
Query: 357 SAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWI 408
L LE N+GNYVLL++IYA W+DV+ R+LM + K PG S +
Sbjct: 408 LKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGISTL 459
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 98/214 (45%), Gaps = 16/214 (7%)
Query: 78 LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGC 137
LQ K+IHA I+ G + + ++ LL + + C+SYA S+ R +P + ++ +I
Sbjct: 22 LQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTV-CLSYALSILRQIPNPSVFLYNTLISS 80
Query: 138 YAKNDMPVK---ALELFHQMVLEACDSI-PNSVTMVSVXXXXXXXXXXXXXXXVHGFILR 193
N + A L+ Q++ + + PN T S+ HG L
Sbjct: 81 IVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHR----HGRALH 136
Query: 194 RGLDSIMPVIN-------ALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 246
+ + +N AL+ Y CG++ +F++++ PD+ +WN+L++ Y N+
Sbjct: 137 AHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEE 196
Query: 247 GKKAIQIFENMIHQGVSPSYISFITVLCACSHAG 280
++ + V P+ +S + ++ +C++ G
Sbjct: 197 IDSDEEVLLLFMRMQVRPNELSLVALIKSCANLG 230
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y + G L ARKVFDE +R + +NA R LA+ G G+E +ELY+ + G+ D T
Sbjct: 260 LYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSAT 319
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ + AC S LQ + A +G E + L+D+ + G + A
Sbjct: 320 FVVTISACSHSGLVDEGLQIFNSMKA---VYGIEPKVEHYGCLVDLLGRSGRLEEAEECI 376
Query: 121 RAMPAK-NSVSWSAMIG-CYAKNDMPVKALELFHQMVLE 157
+ MP K N+ W + +G D + L H + LE
Sbjct: 377 KKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLE 415
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 142/434 (32%), Positives = 228/434 (52%), Gaps = 55/434 (12%)
Query: 23 IYIWNAFFRALAMVGRGEELLE---LYRQM---------NWSGIPSDRFTYTYVLKACVV 70
++++N R ++ GE L LY Q+ N S P D FTY ++LKA
Sbjct: 77 LFLFNPLLRCYSL---GETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSN 133
Query: 71 SEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVS 130
F L G L G+E +++V T L+ +Y G + A+ VF MP +N V+
Sbjct: 134 PRFPSLLLGIGLHGLTLKL--GFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVT 191
Query: 131 WSAMI-------------------------------GCYAKNDMPVKALELFHQMVLEAC 159
W+ MI YA+ D P +A+ LF +MV AC
Sbjct: 192 WNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMV--AC 249
Query: 160 DSI-PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRG-LDSIMPVINALITMYGRCGEIS 217
D+I PN +T++++ VH ++ +RG + + V N+LI Y +CG I
Sbjct: 250 DAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQ 309
Query: 218 IGERVFDKVKN--PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCA 275
+ F ++ N ++VSW ++IS + +G GK+A+ +F++M G+ P+ ++ I+VL A
Sbjct: 310 SAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNA 369
Query: 276 CSHAGLVEEGKI-LFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGP 334
CSH GL EE + F +M+++Y+I P ++HY C+VD+L R RL+EA K+ ++P E
Sbjct: 370 CSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKA 429
Query: 335 TVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLM 394
VW LLG+C ++ +AELAER + L ELE + G+YVL+++I+ + D + RK M
Sbjct: 430 VVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQM 489
Query: 395 GKRVLQKVPGCSWI 408
R + K+PG S +
Sbjct: 490 DVRGVAKLPGHSQV 503
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 90/202 (44%), Gaps = 33/202 (16%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM------NWSGI 54
MY G++ A KVFDE ER WN L +G E+ L +M +W+ I
Sbjct: 167 MYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTI 226
Query: 55 ---------PSD------RFTYTYVLKACVVSEFSVYP-------LQKGKEIHANILRHG 92
P + R +K ++ ++ P L+ +HA + + G
Sbjct: 227 IDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRG 286
Query: 93 YEE-NIHVMTTLLDVYAKFGCISYANSVFRAMP--AKNSVSWSAMIGCYAKNDMPVKALE 149
+ +I V +L+D YAK GCI A F +P KN VSW+ MI +A + M +A+
Sbjct: 287 FVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVS 346
Query: 150 LFHQMVLEACDSIPNSVTMVSV 171
+F M E PN VTM+SV
Sbjct: 347 MFKDM--ERLGLKPNRVTMISV 366
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/402 (32%), Positives = 210/402 (52%), Gaps = 12/402 (2%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 70
A KVF E R + W G +E L+ + +M+ + + TY VL V
Sbjct: 160 ACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD---VEPNLATYVCVL----V 212
Query: 71 SEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVS 130
S V L GK IH IL+ ++ L+D+Y K +S A VF + K+ VS
Sbjct: 213 SSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVS 272
Query: 131 WSAMIGCYAKNDMPVKALELFHQMVLEACDSI-PNSVTMVSVXXXXXXXXXXXXXXXVHG 189
W++MI + +A++LF M + I P+ + SV VH
Sbjct: 273 WNSMISGLVHCERSKEAIDLFSLM--QTSSGIKPDGHILTSVLSACASLGAVDHGRWVHE 330
Query: 190 FILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKK 249
+IL G+ + A++ MY +CG I +F+ +++ +V +WN+L+ +G+G +
Sbjct: 331 YILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLE 390
Query: 250 AIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSK-YRIHPGMEHYACM 308
+++ FE M+ G P+ ++F+ L AC H GLV+EG+ F M S+ Y + P +EHY CM
Sbjct: 391 SLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCM 450
Query: 309 VDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCN-AELAERASAMLFELEPWN 367
+DLL RA LDEA++L++ MP +P + G++L +C+ EL + ++E +
Sbjct: 451 IDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFED 510
Query: 368 AGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIE 409
+G YVLL++I+A + W DV +R+LM + + KVPG S+IE
Sbjct: 511 SGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 161/328 (49%), Gaps = 18/328 (5%)
Query: 24 YIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKE 83
+ +N + A+ + + Y+ +G D FT+ V KAC +FS +++GK+
Sbjct: 72 FSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKAC--GKFS--GIREGKQ 127
Query: 84 IHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDM 143
IH + + G+ ++I+V +L+ Y G A VF MP ++ VSW+ +I + + +
Sbjct: 128 IHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGL 187
Query: 144 PVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVI 203
+AL+ F +M +E PN T V V +HG IL+R +
Sbjct: 188 YKEALDTFSKMDVE-----PNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETG 242
Query: 204 NALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM-IHQGV 262
NALI MY +C ++S RVF +++ D VSWNS+IS + K+AI +F M G+
Sbjct: 243 NALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGI 302
Query: 263 SPSYISFITVLCACSHAGLVEEGKILFESMLS---KYRIHPGMEHYACMVDLLGRANRLD 319
P +VL AC+ G V+ G+ + E +L+ K+ H G +VD+ + ++
Sbjct: 303 KPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIG----TAIVDMYAKCGYIE 358
Query: 320 EAIKLIEDMPFEPGPTVWGSLLGSCRIH 347
A+++ + + T W +LLG IH
Sbjct: 359 TALEIFNGIRSKNVFT-WNALLGGLAIH 385
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 7/171 (4%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNW-SGIPSDRF 59
MY + L A +VF E ++ WN+ L R +E ++L+ M SGI D
Sbjct: 248 MYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGH 307
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
T VL AC S+ + G+ +H IL G + + H+ T ++D+YAK G I A +
Sbjct: 308 ILTSVLSACA----SLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEI 363
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVS 170
F + +KN +W+A++G A + +++L F +MV PN VT ++
Sbjct: 364 FNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFK--PNLVTFLA 412
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 15/166 (9%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G ++ A ++F+ R + ++ WNA LA+ G G E L + +M G + T
Sbjct: 350 MYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVT 409
Query: 61 YTYVLKAC----VVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYA 116
+ L AC +V E Y K K N+ + ++D+ + G + A
Sbjct: 410 FLAALNACCHTGLVDEGRRY-FHKMKSREYNLF-----PKLEHYGCMIDLLCRAGLLDEA 463
Query: 117 NSVFRAMPAKNSVSWSAMIGCYAKN-----DMPVKALELFHQMVLE 157
+ +AMP K V I KN ++P + L+ F + E
Sbjct: 464 LELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFE 509
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/357 (33%), Positives = 188/357 (52%), Gaps = 41/357 (11%)
Query: 187 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 246
VH L+ + N +I+M+G C I+ +RVFD + + D+ SW+ ++ Y +NG
Sbjct: 258 VHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGM 317
Query: 247 GKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA 306
G A+ +FE M G+ P+ +F+TV AC+ G +EE + F+SM +++ I P EHY
Sbjct: 318 GDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYL 377
Query: 307 CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPW 366
++ +LG+ L EA + I D+PFEP W ++ R+H + +L + ++ +++P
Sbjct: 378 GVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDP- 436
Query: 367 NAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQ 426
K V+ K+P K+ + V+S+ +
Sbjct: 437 ----------------------------SKAVINKIPTPPPKSFKET--NMVTSKS---R 463
Query: 427 IEKLRALLIKLSTEMKEQG------YAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLI 480
I + R L E KE Y P T V +D+D+ KE+ LL HSE+LA+A+G+I
Sbjct: 464 ILEFRNLTF-YKDEAKEMAAKKGVVYVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGII 522
Query: 481 NTVKGETIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
T +T+ I KNLR+C DCH F K +SK R ++VRD RFH F+DG CSCG+YW
Sbjct: 523 CTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 134/432 (31%), Positives = 210/432 (48%), Gaps = 28/432 (6%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM------NWSGI 54
+Y LG ++ A+K FD+ E+ WN+ G +E ++ ++ +W+ I
Sbjct: 148 LYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLI 207
Query: 55 PSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGY-----------------EENI 97
S + AC S FS PL+ NIL GY ++N
Sbjct: 208 ISSYAKKGDMGNAC--SLFSAMPLKSPASW--NILIGGYVNCREMKLARTYFDAMPQKNG 263
Query: 98 HVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLE 157
T++ Y K G + A +FR M K+ + + AMI CY +N P AL+LF QM+
Sbjct: 264 VSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLER 323
Query: 158 ACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEIS 217
P+ +T+ SV V +I G+ + +LI +Y + G+ +
Sbjct: 324 NSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFA 383
Query: 218 IGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACS 277
++F + D VS++++I G NG +A +F MI + + P+ ++F +L A S
Sbjct: 384 KAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYS 443
Query: 278 HAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVW 337
H+GLV+EG F SM + + P +HY MVD+LGRA RL+EA +LI+ MP +P VW
Sbjct: 444 HSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVW 502
Query: 338 GSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKR 397
G+LL + +H N E E A + +LE G LA IY+ W D ++VR + ++
Sbjct: 503 GALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEK 562
Query: 398 VLQKVPGCSWIE 409
L K GCSW+E
Sbjct: 563 KLCKTLGCSWVE 574
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 169/384 (44%), Gaps = 30/384 (7%)
Query: 24 YIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKE 83
+ W R L+ + +E +++Y M+ SGIP T VL+AC E V GK
Sbjct: 70 FSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMV----DGKP 125
Query: 84 IHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDM 143
IHA L++G ++V T L+ +Y++ G I A F + KN+VSW++++ Y ++
Sbjct: 126 IHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGE 185
Query: 144 PVKALELFHQ----------MVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFI-- 191
+A +F + +++ + + S+ + G++
Sbjct: 186 LDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNC 245
Query: 192 ----LRRGLDSIMPVINA-----LITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYG 242
L R MP N +I+ Y + G++ E +F + D + ++++I+ Y
Sbjct: 246 REMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYT 305
Query: 243 NNGYGKKAIQIFENMIHQG--VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
NG K A+++F M+ + + P I+ +V+ A S G G + ES ++++ I
Sbjct: 306 QNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWV-ESYITEHGIKI 364
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERA-SAM 359
++DL + +A K+ ++ + + +++ C I+ A A +AM
Sbjct: 365 DDLLSTSLIDLYMKGGDFAKAFKMFSNLN-KKDTVSYSAMIMGCGINGMATEANSLFTAM 423
Query: 360 LFELEPWNAGNYVLLADIYAEAKM 383
+ + P N + L Y+ + +
Sbjct: 424 IEKKIPPNVVTFTGLLSAYSHSGL 447
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 63 YVLKACVVSEFSVYPLQKGKEIHANIL--RHGYEENIHVMTTLLDVYAKFG--CISYANS 118
+ L+ CVV L++ K++HA ++ R+ + E I V TL +F ++Y
Sbjct: 8 FFLQRCVV-------LEQAKQVHAQLVVNRYNHLEPILVHQTL-HFTKEFSRNIVTYVKR 59
Query: 119 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
+ + +S SW ++ +++ + ++++ M P+S + SV
Sbjct: 60 ILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIP--PSSHAVTSVLRACGKM 117
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
+H L+ GL + V L+ +Y R G I + ++ FD + + VSWNSL+
Sbjct: 118 ENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLL 177
Query: 239 SMYGNNGYGKKAIQIFENM 257
Y +G +A ++F+ +
Sbjct: 178 HGYLESGELDEARRVFDKI 196
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 125/433 (28%), Positives = 212/433 (48%), Gaps = 67/433 (15%)
Query: 24 YIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKE 83
+ N+ RA A E L ++R+M + D++++T+VLKAC + ++G++
Sbjct: 106 FTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACA----AFCGFEEGRQ 161
Query: 84 IHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAK--- 140
IH ++ G ++ V TL++VY + G A V MP +++VSW++++ Y +
Sbjct: 162 IHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGL 221
Query: 141 ---------------------------------------NDMPVK--------------- 146
+ MPV+
Sbjct: 222 VDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHV 281
Query: 147 -----ALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMP 201
LE+F++M+ ++ + P+ T+VSV VH +I + G++
Sbjct: 282 GCYNEVLEVFNKMLDDSTEK-PDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGF 340
Query: 202 VINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG 261
+ AL+ MY +CG+I VF DV +WNS+IS +G GK A++IF M+++G
Sbjct: 341 LATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEG 400
Query: 262 VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEA 321
P+ I+FI VL AC+H G++++ + LFE M S YR+ P +EHY CMVDLLGR +++EA
Sbjct: 401 FKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEA 460
Query: 322 IKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEA 381
+L+ ++P + + SLLG+C+ E AER + L EL ++ Y ++++YA
Sbjct: 461 EELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASD 520
Query: 382 KMWSDVKSVRKLM 394
W V R+ M
Sbjct: 521 GRWEKVIDGRRNM 533
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 128/275 (46%), Gaps = 20/275 (7%)
Query: 78 LQKGKEIHANILRHGYEENIHVMTTLLDVYA---KFGCISYANSVFRAMPAKNSVSWSAM 134
L + ++ HA +L+ G + + L+ A + +SYA+S+ + + N + +++
Sbjct: 52 LTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSV 111
Query: 135 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 194
I YA + P AL +F +M+L P+ + V +HG ++
Sbjct: 112 IRAYANSSTPEVALTVFREMLLGPV--FPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKS 169
Query: 195 GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIF 254
GL + + V N L+ +YGR G I +V D++ D VSWNSL+S Y G +A +F
Sbjct: 170 GLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALF 229
Query: 255 ENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESM-----LSKYRIHPGMEHYACMV 309
+ M + V S+ ++ + AGLV+E K +F+SM +S + H C
Sbjct: 230 DEMEERNVE----SWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYN 285
Query: 310 DLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSC 344
++L N K+++D +P S+L +C
Sbjct: 286 EVLEVFN------KMLDDSTEKPDGFTLVSVLSAC 314
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 70/141 (49%), Gaps = 10/141 (7%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G +D A +VF T +R + WN+ L++ G G++ LE++ +M + G + T
Sbjct: 348 MYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGIT 407
Query: 61 YTYVLKACVVSEFSVYPLQKGK---EIHANILRHGYEENIHVMTTLLDVYAKFGCISYAN 117
+ VL AC V L + + E+ +++ R E I ++D+ + G I A
Sbjct: 408 FIGVLSACN----HVGMLDQARKLFEMMSSVYR--VEPTIEHYGCMVDLLGRMGKIEEAE 461
Query: 118 SVFRAMPA-KNSVSWSAMIGC 137
+ +PA + S+ +++G
Sbjct: 462 ELVNEIPADEASILLESLLGA 482
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 130/423 (30%), Positives = 213/423 (50%), Gaps = 38/423 (8%)
Query: 18 TRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYP 77
+R +T ++N R+ G + L L+ M S + + T+ ++KA S FSV
Sbjct: 46 SRWKTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKA-ACSSFSV-- 102
Query: 78 LQKGKEIHANILRHGYEENIHVMTT-------------------------------LLDV 106
G +H L+ G+ + V T+ LLD
Sbjct: 103 -SYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDA 161
Query: 107 YAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVL-EACDSIPNS 165
+ G + YA F+ MP + VSW+ +I ++K + KAL +F +M+ E PN
Sbjct: 162 CGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNE 221
Query: 166 VTMVSVXXXXXXXXX--XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVF 223
T VSV +HG+++ + + + AL+ MYG+ G++ + +F
Sbjct: 222 ATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIF 281
Query: 224 DKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVE 283
D++++ V +WN++IS +NG K+A+++FE M V P+ I+ + +L AC+ + LV+
Sbjct: 282 DQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVD 341
Query: 284 EGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGS 343
G LF S+ S+Y+I P EHY C+VDL+GRA L +A I+ +PFEP +V G+LLG+
Sbjct: 342 LGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGA 401
Query: 344 CRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVP 403
C+IH N EL L L+P + G YV L+ A WS+ + +RK M + ++K+P
Sbjct: 402 CKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIP 461
Query: 404 GCS 406
S
Sbjct: 462 AYS 464
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 38/204 (18%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM------NWSG-- 53
Y E+G L+ +RK+FD+ + N+ A G + E +++M +W+
Sbjct: 131 YGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVI 190
Query: 54 --------------------------IPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHAN 87
I + T+ VL +C + F ++ GK+IH
Sbjct: 191 NGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSC--ANFDQGGIRLGKQIHGY 248
Query: 88 ILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKA 147
++ + T LLD+Y K G + A ++F + K +W+A+I A N P +A
Sbjct: 249 VMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQA 308
Query: 148 LELFHQMVLEACDSIPNSVTMVSV 171
LE+F M ++ PN +T++++
Sbjct: 309 LEMFEMM--KSSYVHPNGITLLAI 330
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G L+ A +FD+ R++ + WNA ALA GR ++ LE++ M S + + T
Sbjct: 267 MYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGIT 326
Query: 61 YTYVLKACVVSEF 73
+L AC S+
Sbjct: 327 LLAILTACARSKL 339
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/336 (34%), Positives = 187/336 (55%), Gaps = 8/336 (2%)
Query: 101 TTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACD 160
T+++D Y + G +S A +F+ + K+ V+W+ MI +N++ +A L MV C
Sbjct: 404 TSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMV--RCG 461
Query: 161 SIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRG--LDSIMPVINALITMYGRCGEISI 218
P + T + +H I + D + + N+L++MY +CG I
Sbjct: 462 LKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIED 521
Query: 219 GERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSH 278
+F K+ D VSWNS+I ++G KA+ +F+ M+ G P+ ++F+ VL ACSH
Sbjct: 522 AYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSH 581
Query: 279 AGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWG 338
+GL+ G LF++M Y I PG++HY M+DLLGRA +L EA + I +PF P TV+G
Sbjct: 582 SGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYG 641
Query: 339 SLLGSCRIHC---NAE-LAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLM 394
+LLG C ++ +AE +AERA+ L EL+P NA +V L ++YA K +RK M
Sbjct: 642 ALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEM 701
Query: 395 GKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKL 430
G + ++K PGCSW+ V + F+S ++ + ++
Sbjct: 702 GIKGVKKTPGCSWVVVNGRANVFLSGDKSASEAAQM 737
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 162/357 (45%), Gaps = 36/357 (10%)
Query: 6 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPS-DRFTYTYV 64
G + A ++FDE ER + WN L G E+ +++ M PS D ++ +
Sbjct: 152 GRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAM-----PSRDVVSWNAM 206
Query: 65 LKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP 124
+K + ++ +++ K + ++ E+N+ T+++ Y ++G + A +F MP
Sbjct: 207 IKGYIEND----GMEEAKLLFGDM----SEKNVVTWTSMVYGYCRYGDVREAYRLFCEMP 258
Query: 125 AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXX--XXXXXXXX 182
+N VSW+AMI +A N++ +AL LF +M + PN T++S+
Sbjct: 259 ERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRR 318
Query: 183 XXXXVHGFILRRGLDSI---MPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+H ++ G +++ + +L+ MY G I+ + + + ++ D+ S N +I+
Sbjct: 319 LGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLN--ESFDLQSCNIIIN 376
Query: 240 MYGNNGYGKKAIQIFENM--IHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYR 297
Y NG ++A +FE + +H V S+ +++ AG V LF+ + K
Sbjct: 377 RYLKNGDLERAETLFERVKSLHDKV-----SWTSMIDGYLEAGDVSRAFGLFQKLHDKDG 431
Query: 298 IHPGMEHYACMVDLLGRANRLDEAIKLIEDM---PFEPGPTVWGSLLGSCRIHCNAE 351
+ + M+ L + EA L+ DM +P + + LL S N +
Sbjct: 432 V-----TWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLD 483
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 114/269 (42%), Gaps = 32/269 (11%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y E G + A +F + ++ W L E L M G+ TY
Sbjct: 410 YLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTY 469
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHG--YEENIHVMTTLLDVYAKFGCISYANSV 119
+ +L S + L +GK IH I + Y+ ++ + +L+ +YAK G I A +
Sbjct: 470 SVLLS----SAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEI 525
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F M K++VSW++MI + + + KAL LF +M+ PNSVT + V
Sbjct: 526 FAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSG--KKPNSVTFLGVLSACS--- 580
Query: 180 XXXXXXXVHGFILRRGLD---------SIMPVIN---ALITMYGRCGEISIGERVFDKVK 227
H ++ RGL+ SI P I+ ++I + GR G++ E +
Sbjct: 581 --------HSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALP 632
Query: 228 -NPDVVSWNSLISMYGNNGYGKKAIQIFE 255
PD + +L+ + G N K A I E
Sbjct: 633 FTPDHTVYGALLGLCGLNWRDKDAEGIAE 661
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 96/220 (43%), Gaps = 20/220 (9%)
Query: 78 LQKGKEIHA-----NILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWS 132
L +G +HA I + G + T+LL YAK G + A +F MP +N V+ +
Sbjct: 53 LSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCN 112
Query: 133 AMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFIL 192
AM+ Y K +A LF +M N V+ + + +
Sbjct: 113 AMLTGYVKCRRMNEAWTLFREMP-------KNVVSWTVMLTALCDDGRSEDAVELFDEMP 165
Query: 193 RRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQ 252
R + S N L+T R G++ ++VFD + + DVVSWN++I Y N ++A
Sbjct: 166 ERNVVS----WNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKL 221
Query: 253 IFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESM 292
+F +M + V +++ +++ G V E LF M
Sbjct: 222 LFGDMSEKNV----VTWTSMVYGYCRYGDVREAYRLFCEM 257
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 208 bits (530), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 120/393 (30%), Positives = 195/393 (49%), Gaps = 5/393 (1%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y G L A +++ ++ +I + A G + + + + + D
Sbjct: 291 YSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVAL 350
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
+L C S + G +H ++ G V+ L+ +Y+KF + +F
Sbjct: 351 VGILHGCKKSSH----IDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFE 406
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
+ +SW+++I ++ A E+FHQM+L +P+++T+ S+
Sbjct: 407 QLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTG-GLLPDAITIASLLAGCSQLCCL 465
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY 241
+HG+ LR ++ V ALI MY +CG E VF +K P +WNS+IS Y
Sbjct: 466 NLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGY 525
Query: 242 GNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPG 301
+G +A+ + M +G+ P I+F+ VL AC+H G V+EGKI F +M+ ++ I P
Sbjct: 526 SLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPT 585
Query: 302 MEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLF 361
++HYA MV LLGRA EA+ LI M +P VWG+LL +C IH E+ E + +F
Sbjct: 586 LQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMF 645
Query: 362 ELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLM 394
L+ N G YVL++++YA MW DV VR +M
Sbjct: 646 MLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMM 678
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 129/233 (55%), Gaps = 4/233 (1%)
Query: 43 LELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTT 102
+ ++R + S + + FT + L+A S F+ + LQ +++ ++ + G + ++V T+
Sbjct: 33 ITIFRDLLRSSLTPNHFTMSIFLQATTTS-FNSFKLQV-EQVQTHLTKSGLDRFVYVKTS 90
Query: 103 LLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI 162
LL++Y K GC++ A +F MP +++V W+A+I Y++N A +LF M+ +
Sbjct: 91 LLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFS-- 148
Query: 163 PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERV 222
P++ T+V++ VHG + GL+ V NALI+ Y +C E+ E +
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVL 208
Query: 223 FDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCA 275
F ++K+ VSWN++I Y +G ++AI +F+NM + V S ++ I +L A
Sbjct: 209 FREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 261
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 152/348 (43%), Gaps = 22/348 (6%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y + G + A+ +FDE ER +WNA + G + +L+ M G T
Sbjct: 94 LYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATT 153
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+L C F + +G+ +H + G E + V L+ Y+K + A +F
Sbjct: 154 LVNLLPFCGQCGF----VSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLF 209
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
R M K++VSW+ MIG Y+++ + +A+ +F M + + P VT++++
Sbjct: 210 REMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISP--VTIINLLSAHVSHEP 267
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+H +++ G+ + + V+ +L+ Y RCG + ER++ K +V S++S
Sbjct: 268 ------LHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSC 321
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
Y G A+ F + ++ + +L C + ++ G L Y I
Sbjct: 322 YAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGM-----SLHGYAIKS 376
Query: 301 GMEHYACMVD----LLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSC 344
G+ +V+ + + + ++ + L E + P + W S++ C
Sbjct: 377 GLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLIS-WNSVISGC 423
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 7/172 (4%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWS-GIPSDRF 59
MY + ++ +F++ +E + WN+ GR E++ QM + G+ D
Sbjct: 391 MYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAI 450
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
T +L C + L GKE+H LR+ +E V T L+D+YAK G A SV
Sbjct: 451 TIASLLAGCS----QLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESV 506
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 171
F+++ A + +W++MI Y+ + + +AL + +M + P+ +T + V
Sbjct: 507 FKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLK--PDEITFLGV 556
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Query: 187 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 246
V + + GLD + V +L+ +Y + G ++ + +FD++ D V WN+LI Y NGY
Sbjct: 72 VQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGY 131
Query: 247 GKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA 306
A ++F M+ QG SPS + + +L C G V +G+ + + +K + +
Sbjct: 132 ECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSV-HGVAAKSGLELDSQVKN 190
Query: 307 CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGS 343
++ + L A L +M + W +++G+
Sbjct: 191 ALISFYSKCAELGSAEVLFREMK-DKSTVSWNTMIGA 226
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 223/448 (49%), Gaps = 48/448 (10%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + GS+ A+KVFD T E+ + +WN A A G E L L+ M G+P + T
Sbjct: 419 MYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVIT 478
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ ++ ++LR+G + A +F
Sbjct: 479 WNLII--------------------LSLLRNGQ-------------------VDEAKDMF 499
Query: 121 RAMPAK----NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXX 176
M + N +SW+ M+ +N +A+ +M + PN+ ++
Sbjct: 500 LQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKM--QESGLRPNAFSITVALSACA 557
Query: 177 XXXXXXXXXXVHGFILRR-GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWN 235
+HG+I+R S++ + +L+ MY +CG+I+ E+VF ++ N
Sbjct: 558 HLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSN 617
Query: 236 SLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSK 295
++IS Y G K+AI ++ ++ G+ P I+ VL AC+HAG + + +F ++SK
Sbjct: 618 AMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSK 677
Query: 296 YRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAER 355
+ P +EHY MVDLL A ++A++LIE+MPF+P + SL+ SC EL +
Sbjct: 678 RSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDY 737
Query: 356 ASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEV--KKK 413
S L E EP N+GNYV +++ YA W +V +R++M + L+K PGCSWI++ ++
Sbjct: 738 LSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEG 797
Query: 414 IYSFVSSEEDNPQIEKLRALLIKLSTEM 441
++ FV++++ + +I +++ +L L +M
Sbjct: 798 VHVFVANDKTHTRINEIQMMLALLLYDM 825
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 162/328 (49%), Gaps = 7/328 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G LD A KVFDE +R WNA G+ EE + L+ M G+ R T
Sbjct: 217 MYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVT 276
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ C+ + ++ +++GK+ HA + +G E + + T+LL+ Y K G I YA VF
Sbjct: 277 ----VSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVF 332
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
M K+ V+W+ +I Y + + A+ + M LE + VT+ ++
Sbjct: 333 DRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKY--DCVTLATLMSAAARTEN 390
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
V + +R +S + + + ++ MY +CG I ++VFD D++ WN+L++
Sbjct: 391 LKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAA 450
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
Y +G +A+++F M +GV P+ I++ ++ + G V+E K +F M S I P
Sbjct: 451 YAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS-GIIP 509
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDM 328
+ + M++ + + +EAI + M
Sbjct: 510 NLISWTTMMNGMVQNGCSEEAILFLRKM 537
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 138/262 (52%), Gaps = 10/262 (3%)
Query: 29 FFRALAMVGRGE--ELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHA 86
F R ++ GE E L L +M++ + Y +L+ CV L GK+IHA
Sbjct: 39 FHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYER----DLSTGKQIHA 94
Query: 87 NILRHG--YEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMP 144
IL++G Y N ++ T L+ YAK + A +F + +N SW+A+IG + +
Sbjct: 95 RILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLC 154
Query: 145 VKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVIN 204
AL F +M+ + P++ + +V VHG++++ GL+ + V +
Sbjct: 155 EGALMGFVEMLEN--EIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVAS 212
Query: 205 ALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSP 264
+L MYG+CG + +VFD++ + + V+WN+L+ Y NG ++AI++F +M QGV P
Sbjct: 213 SLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEP 272
Query: 265 SYISFITVLCACSHAGLVEEGK 286
+ ++ T L A ++ G VEEGK
Sbjct: 273 TRVTVSTCLSASANMGGVEEGK 294
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 160/342 (46%), Gaps = 8/342 (2%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y + +L+ A +F + R R ++ W A +G E L + +M + I D F
Sbjct: 117 YAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVV 176
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
V KAC ++S + G+ +H +++ G E+ + V ++L D+Y K G + A+ VF
Sbjct: 177 PNVCKACGALKWSRF----GRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFD 232
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
+P +N+V+W+A++ Y +N +A+ LF M + + P VT+ +
Sbjct: 233 EIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVE--PTRVTVSTCLSASANMGGV 290
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY 241
H + G++ + +L+ Y + G I E VFD++ DVV+WN +IS Y
Sbjct: 291 EEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGY 350
Query: 242 GNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPG 301
G + AI + + M + + ++ T++ A + ++ GK + + ++
Sbjct: 351 VQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEV-QCYCIRHSFESD 409
Query: 302 MEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGS 343
+ + ++D+ + + +A K+ D E +W +LL +
Sbjct: 410 IVLASTVMDMYAKCGSIVDAKKVF-DSTVEKDLILWNTLLAA 450
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 135/433 (31%), Positives = 210/433 (48%), Gaps = 45/433 (10%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y + G ++ A ++FD+ E+ I W + +E L Y +M G+
Sbjct: 249 YSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMM 308
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYA------------- 108
+L A S S KG ++H I++ G++ + T++ YA
Sbjct: 309 VDLLSASARSVGS----SKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFE 364
Query: 109 ------------------KFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALEL 150
K G + A VF K+ SW+AMI YA++ P AL L
Sbjct: 365 ASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHL 424
Query: 151 FHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVIN---ALI 207
F +M+ + P+++TMVSV H ++ +I P N A+I
Sbjct: 425 FREMI-SSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL---NFSTIPPNDNLTAAII 480
Query: 208 TMYGRCGEISIGERVFDKVKN---PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSP 264
MY +CG I +F + KN + WN++I +G+ K A+ ++ ++ + P
Sbjct: 481 DMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKP 540
Query: 265 SYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKL 324
+ I+F+ VL AC HAGLVE GK FESM S + I P ++HY CMVDLLG+A RL+EA ++
Sbjct: 541 NSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEM 600
Query: 325 IEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMW 384
I+ MP + +WG LL + R H N E+AE A+ L ++P + G V+L+++YA+A W
Sbjct: 601 IKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRW 660
Query: 385 SDVKSVRKLMGKR 397
DV VR+ M R
Sbjct: 661 EDVALVREEMRTR 673
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 163/406 (40%), Gaps = 68/406 (16%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 70
A K+FD ER+ + + A + E +EL+R+M GI + T V+ AC
Sbjct: 126 ALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACS- 184
Query: 71 SEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVS 130
+ + + + + ++ E + V T LL +Y C+ A +F MP +N V+
Sbjct: 185 ---HLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVT 241
Query: 131 WSAMIGCYAKNDMPVKALELFHQMV-----------------------------LEACDS 161
W+ M+ Y+K + +A ELF Q+ + C
Sbjct: 242 WNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGM 301
Query: 162 IPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD------------------------ 197
P+ V MV + +HG I++RG D
Sbjct: 302 KPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQ 361
Query: 198 ----SIMPVI---NALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKA 250
S+ I NALI + + G + VFD+ + D+ SWN++IS Y + + A
Sbjct: 362 QFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLA 421
Query: 251 IQIFENMIHQG-VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMV 309
+ +F MI V P I+ ++V A S G +EEGK + L+ I P A ++
Sbjct: 422 LHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHD-YLNFSTIPPNDNLTAAII 480
Query: 310 DLLGRANRLDEAIKLIEDMPFEPGPTV--WGSLLGSCRIHCNAELA 353
D+ + ++ A+ + T+ W +++ H +A+LA
Sbjct: 481 DMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLA 526
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 122/269 (45%), Gaps = 43/269 (15%)
Query: 81 GKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR------------------- 121
G++IH +L+ G + N ++ ++L++YAK ++ A SVFR
Sbjct: 60 GRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVR 119
Query: 122 ------------AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMV 169
MP ++ VS++ +I YA+N+ +A+ELF +M + N VT+
Sbjct: 120 SRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREM--RNLGIMLNEVTLA 177
Query: 170 SVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNP 229
+V + ++ L+ + V L+ MY C + ++FD++
Sbjct: 178 TVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPER 237
Query: 230 DVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILF 289
++V+WN +++ Y G ++A ++F+ + + + +S+ T++ C ++E + +
Sbjct: 238 NLVTWNVMLNGYSKAGLIEQAEELFDQITEKDI----VSWGTMIDGCLRKNQLDEALVYY 293
Query: 290 ESMLSKYRIHPGME-HYACMVDLLGRANR 317
ML GM+ MVDLL + R
Sbjct: 294 TEML-----RCGMKPSEVMMVDLLSASAR 317
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 36/208 (17%)
Query: 187 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVF----------------------- 223
+H +L+ GLDS + N+++ MY +C ++ E VF
Sbjct: 63 IHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRR 122
Query: 224 --DKVKNPDV------VSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCA 275
D +K DV VS+ +LI Y N +A+++F M + G+ + ++ TV+ A
Sbjct: 123 LWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISA 182
Query: 276 CSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPT 335
CSH G + + ++L +S+ K ++ + ++ + L +A KL ++MP E
Sbjct: 183 CSHLGGIWDCRML-QSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMP-ERNLV 240
Query: 336 VWGSLLGSCRIHCNAELAERASAMLFEL 363
W +L + A L E+A + ++
Sbjct: 241 TWNVMLNG---YSKAGLIEQAEELFDQI 265
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 133/449 (29%), Positives = 220/449 (48%), Gaps = 37/449 (8%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY G +D AR++FD ER WNA + E +L +M SG+ + T
Sbjct: 228 MYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVT 287
Query: 61 YTYV-------------------LKACVVSEFSVY------------PLQKGKEIHANIL 89
+ + ++ C V SV L+ GK H ++
Sbjct: 288 WNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVI 347
Query: 90 RH-GYEENI-HVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKA 147
R + +I +V +L+ +Y++ + +A VF+ + A + +W+++I +A N+ +
Sbjct: 348 RSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEET 407
Query: 148 LELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR-GLDSIMPVINAL 206
L +M+L PN +T+ S+ H +ILRR + + N+L
Sbjct: 408 SFLLKEMLLSGFH--PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSL 465
Query: 207 ITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSY 266
+ MY + GEI +RVFD ++ D V++ SLI YG G G+ A+ F++M G+ P +
Sbjct: 466 VDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDH 525
Query: 267 ISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIE 326
++ + VL ACSH+ LV EG LF M + I +EHY+CMVDL RA LD+A +
Sbjct: 526 VTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFH 585
Query: 327 DMPFEPGPTVWGSLLGSCRIHCNAELAE-RASAMLFELEPWNAGNYVLLADIYAEAKMWS 385
+P+EP + +LL +C IH N + E A +L E +P + G+Y+LLAD+YA WS
Sbjct: 586 TIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWS 645
Query: 386 DVKSVRKLMGKRVLQKVPGCSWIEVKKKI 414
+ +V+ L+ +QK + +E ++
Sbjct: 646 KLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 155/363 (42%), Gaps = 39/363 (10%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
Y LD A+ + + + WN + R +E + +Y++M GI +D FT
Sbjct: 127 FYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFT 186
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
Y V+KAC ++ G+ +H +I + N++V L+ +Y +FG + A +F
Sbjct: 187 YPSVIKACA----ALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLF 242
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEA---------------------- 158
M +++VSW+A+I CY + +A +L +M L
Sbjct: 243 DRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYI 302
Query: 159 -----------CDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDS--IMPVINA 205
C+ SV M++ H ++R S I V N+
Sbjct: 303 GALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNS 362
Query: 206 LITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPS 265
LITMY RC ++ VF +V+ + +WNS+IS + N ++ + + M+ G P+
Sbjct: 363 LITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPN 422
Query: 266 YISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLI 325
+I+ ++L + G ++ GK +L + + + +VD+ ++ + A ++
Sbjct: 423 HITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVF 482
Query: 326 EDM 328
+ M
Sbjct: 483 DSM 485
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 98/200 (49%), Gaps = 2/200 (1%)
Query: 81 GKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAK 140
G+++HA+ + G E + ++ L+ Y+ F + A ++ + + W+ +IG Y +
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR 161
Query: 141 NDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIM 200
N +++ ++ +M+ + + + T SV VHG I +
Sbjct: 162 NKRFQESVSVYKRMMSKGIRA--DEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNL 219
Query: 201 PVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQ 260
V NALI+MY R G++ + R+FD++ D VSWN++I+ Y + +A ++ + M
Sbjct: 220 YVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLS 279
Query: 261 GVSPSYISFITVLCACSHAG 280
GV S +++ T+ C AG
Sbjct: 280 GVEASIVTWNTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 133/449 (29%), Positives = 220/449 (48%), Gaps = 37/449 (8%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY G +D AR++FD ER WNA + E +L +M SG+ + T
Sbjct: 228 MYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVT 287
Query: 61 YTYV-------------------LKACVVSEFSVY------------PLQKGKEIHANIL 89
+ + ++ C V SV L+ GK H ++
Sbjct: 288 WNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVI 347
Query: 90 RH-GYEENI-HVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKA 147
R + +I +V +L+ +Y++ + +A VF+ + A + +W+++I +A N+ +
Sbjct: 348 RSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEET 407
Query: 148 LELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR-GLDSIMPVINAL 206
L +M+L PN +T+ S+ H +ILRR + + N+L
Sbjct: 408 SFLLKEMLLSGFH--PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSL 465
Query: 207 ITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSY 266
+ MY + GEI +RVFD ++ D V++ SLI YG G G+ A+ F++M G+ P +
Sbjct: 466 VDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDH 525
Query: 267 ISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIE 326
++ + VL ACSH+ LV EG LF M + I +EHY+CMVDL RA LD+A +
Sbjct: 526 VTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFH 585
Query: 327 DMPFEPGPTVWGSLLGSCRIHCNAELAE-RASAMLFELEPWNAGNYVLLADIYAEAKMWS 385
+P+EP + +LL +C IH N + E A +L E +P + G+Y+LLAD+YA WS
Sbjct: 586 TIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWS 645
Query: 386 DVKSVRKLMGKRVLQKVPGCSWIEVKKKI 414
+ +V+ L+ +QK + +E ++
Sbjct: 646 KLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 155/363 (42%), Gaps = 39/363 (10%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
Y LD A+ + + + WN + R +E + +Y++M GI +D FT
Sbjct: 127 FYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFT 186
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
Y V+KAC ++ G+ +H +I + N++V L+ +Y +FG + A +F
Sbjct: 187 YPSVIKACA----ALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLF 242
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEA---------------------- 158
M +++VSW+A+I CY + +A +L +M L
Sbjct: 243 DRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYI 302
Query: 159 -----------CDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDS--IMPVINA 205
C+ SV M++ H ++R S I V N+
Sbjct: 303 GALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNS 362
Query: 206 LITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPS 265
LITMY RC ++ VF +V+ + +WNS+IS + N ++ + + M+ G P+
Sbjct: 363 LITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPN 422
Query: 266 YISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLI 325
+I+ ++L + G ++ GK +L + + + +VD+ ++ + A ++
Sbjct: 423 HITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVF 482
Query: 326 EDM 328
+ M
Sbjct: 483 DSM 485
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 98/200 (49%), Gaps = 2/200 (1%)
Query: 81 GKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAK 140
G+++HA+ + G E + ++ L+ Y+ F + A ++ + + W+ +IG Y +
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR 161
Query: 141 NDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIM 200
N +++ ++ +M+ + + + T SV VHG I +
Sbjct: 162 NKRFQESVSVYKRMMSKGIRA--DEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNL 219
Query: 201 PVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQ 260
V NALI+MY R G++ + R+FD++ D VSWN++I+ Y + +A ++ + M
Sbjct: 220 YVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLS 279
Query: 261 GVSPSYISFITVLCACSHAG 280
GV S +++ T+ C AG
Sbjct: 280 GVEASIVTWNTIAGGCLEAG 299
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 137/443 (30%), Positives = 218/443 (49%), Gaps = 42/443 (9%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM-NWSGIPSDRF 59
MY G A ++F++ +++ +NAF L G + ++ M +S +
Sbjct: 173 MYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDV 232
Query: 60 TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
T+ + AC S+ LQ G+++H +++ ++ V T L+D+Y+K C A V
Sbjct: 233 TFVNAITACA----SLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIV 288
Query: 120 FRAMP-AKNSVSWSAMIGCYAKNDMPVKALELFHQM------------------------ 154
F + +N +SW+++I N A+ELF ++
Sbjct: 289 FTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGK 348
Query: 155 VLEACD---------SIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINA 205
V+EA +P+ + S+ +HG +++ + + V+ +
Sbjct: 349 VIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTS 408
Query: 206 LITMYGRCGEISIGERVFDKV--KNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVS 263
LI MY +CG S R+FD+ K D V WN +IS YG +G + AI+IFE + + V
Sbjct: 409 LIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVE 468
Query: 264 PSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIK 323
PS +F VL ACSH G VE+G +F M +Y P EH CM+DLLGR+ RL EA +
Sbjct: 469 PSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKE 528
Query: 324 LIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKM 383
+I+ M SLLGSCR H + L E A+ L ELEP N +V+L+ IYA +
Sbjct: 529 VIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALER 587
Query: 384 WSDVKSVRKLMGKRVLQKVPGCS 406
W DV+S+R+++ ++ L K+PG S
Sbjct: 588 WEDVESIRQVIDQKQLVKLPGLS 610
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 145/313 (46%), Gaps = 13/313 (4%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY ++ + A KV DE ER I NA L G + ++ SG + T
Sbjct: 75 MYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVT 134
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
VL C ++ G ++H ++ G+E ++V T+L+ +Y++ G A +F
Sbjct: 135 VASVLGGC-------GDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMF 187
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+P K+ V+++A I +N + +F+ M + + PN VT V+
Sbjct: 188 EKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEE-PNDVTFVNAITACASLLN 246
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNP-DVVSWNSLIS 239
+HG ++++ V ALI MY +C VF ++K+ +++SWNS+IS
Sbjct: 247 LQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVIS 306
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
NG + A+++FE + +G+ P ++ +++ S G V E FE MLS +
Sbjct: 307 GMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMV- 365
Query: 300 PGMEHYACMVDLL 312
P ++ C+ LL
Sbjct: 366 PSLK---CLTSLL 375
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 120/254 (47%), Gaps = 22/254 (8%)
Query: 57 DRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYA 116
++FT+ +LK+C + + +G+ +HA +++ G+ ++ T L+ +Y K ++ A
Sbjct: 30 NKFTFPPLLKSCA----KLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDA 85
Query: 117 NSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXX 176
V MP + S +A + +N A +F + S NSVT+ SV
Sbjct: 86 LKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSG--SGMNSVTVASVLGGCG 143
Query: 177 XXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNS 236
+H ++ G + + V +L++MY RCGE + R+F+KV + VV++N+
Sbjct: 144 DIEGGMQ---LHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNA 200
Query: 237 LISMYGNNGYGKKAIQIFENMIHQGVS--PSYISFITVLCACSHA----------GLVEE 284
IS NG +F N++ + S P+ ++F+ + AC+ GLV +
Sbjct: 201 FISGLMENGVMNLVPSVF-NLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMK 259
Query: 285 GKILFESMLSKYRI 298
+ FE+M+ I
Sbjct: 260 KEFQFETMVGTALI 273
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 194/389 (49%), Gaps = 43/389 (11%)
Query: 45 LYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLL 104
+ +M +P D T+ +V KAC + L K +H LR G ++ + TL+
Sbjct: 102 FFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVK--TLHCQALRFGLLSDLFTLNTLI 159
Query: 105 DVYAKFGCIS-------------------------------YANSVFRAMPAKNSVSWSA 133
VY+ I A +F +MP ++ VSW++
Sbjct: 160 RVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNS 219
Query: 134 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR 193
+I YA+ + +A++LF +MV A P++V +VS +H + R
Sbjct: 220 LISGYAQMNHCREAIKLFDEMV--ALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKR 277
Query: 194 RGL--DSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAI 251
+ L DS + L+ Y +CG I +F+ + + +WN++I+ +G G+ +
Sbjct: 278 KRLFIDSFLAT--GLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTV 335
Query: 252 QIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDL 311
F M+ G+ P ++FI+VL CSH+GLV+E + LF+ M S Y ++ M+HY CM DL
Sbjct: 336 DYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADL 395
Query: 312 LGRANRLDEAIKLIEDMPFEPGPT----VWGSLLGSCRIHCNAELAERASAMLFELEPWN 367
LGRA ++EA ++IE MP + G W LLG CRIH N E+AE+A+ + L P +
Sbjct: 396 LGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPED 455
Query: 368 AGNYVLLADIYAEAKMWSDVKSVRKLMGK 396
G Y ++ ++YA A+ W +V VR+++ +
Sbjct: 456 GGVYKVMVEMYANAERWEEVVKVREIIDR 484
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 76/202 (37%), Gaps = 37/202 (18%)
Query: 1 MYHELGSLDCARKVFDETRERTIYI-------------------------------WNAF 29
+Y + +D A ++FDE +R + WN+
Sbjct: 161 VYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSL 220
Query: 30 FRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANIL 89
A + E ++L+ +M G+ D L AC S QKGK IH
Sbjct: 221 ISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSG----DWQKGKAIHDYTK 276
Query: 90 RHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALE 149
R + + T L+D YAK G I A +F K +W+AMI A + ++
Sbjct: 277 RKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVD 336
Query: 150 LFHQMVLEACDSIPNSVTMVSV 171
F +MV P+ VT +SV
Sbjct: 337 YFRKMVSSGIK--PDGVTFISV 356
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 12/142 (8%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y + G +D A ++F+ ++T++ WNA LAM G GE ++ +R+M SGI D T+
Sbjct: 294 YAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTF 353
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHV--MTTLLDVYAKFGCISYANSV 119
VL C S + + + + + +R Y+ N + + D+ + G I A +
Sbjct: 354 ISVLVGCSHSGL----VDEARNLF-DQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEM 408
Query: 120 FRAMPAKNS-----VSWSAMIG 136
MP ++WS ++G
Sbjct: 409 IEQMPKDGGNREKLLAWSGLLG 430
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 111/332 (33%), Positives = 174/332 (52%), Gaps = 11/332 (3%)
Query: 206 LITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPS 265
L+ MY CG + VF+K+ ++ +W +I + NG+G+ AI +F +G P
Sbjct: 295 LLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPD 354
Query: 266 YISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLI 325
F + AC G V+EG + FESM Y I P +E Y +V++ LDEA++ +
Sbjct: 355 GQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFV 414
Query: 326 EDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWS 385
E MP EP VW +L+ R+H N EL + + ++ L+P I +A S
Sbjct: 415 ERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREGFIPVKA---S 471
Query: 386 DVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALLIKLSTEMKEQG 445
DV+ K L+K G VK + F + + + P+ ++L LL L M E G
Sbjct: 472 DVE-------KESLKKRSGI-LHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEVG 523
Query: 446 YAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLINTVKGETIRITKNLRLCEDCHAFTK 505
Y +T + +D+D+ KE +LLGHSE++A A ++N+ + + KNLR+C DCH K
Sbjct: 524 YVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALK 583
Query: 506 FISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
+S RE++ RD+ RFH ++G C+C +YW
Sbjct: 584 IMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 210/413 (50%), Gaps = 11/413 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y G ++ AR FD +ER + WNA + L++ M G D FT
Sbjct: 157 LYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFT 216
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ +L+A +V V L+ E+H ++ G+ + ++ +L++ Y K G ++ A +
Sbjct: 217 FGSLLRASIV----VKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLH 272
Query: 121 RAMPAKNSVSWSAMI-GCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
++ +S +A+I G +N+ A ++F M+ + + V + S+
Sbjct: 273 EGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMI--RMKTKMDEVVVSSMLKICTTIA 330
Query: 180 XXXXXXXVHGFILRRG-LDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
+HGF L+ + + + N+LI MY + GEI F+++K DV SW SLI
Sbjct: 331 SVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLI 390
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 298
+ YG +G +KAI ++ M H+ + P+ ++F+++L ACSH G E G ++++M++K+ I
Sbjct: 391 AGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGI 450
Query: 299 HPGMEHYACMVDLLGRANRLDEAIKLIEDMP--FEPGPTVWGSLLGSCRIHCNAELAERA 356
EH +C++D+L R+ L+EA LI + WG+ L +CR H N +L++ A
Sbjct: 451 EAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVA 510
Query: 357 SAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKR-VLQKVPGCSWI 408
+ L +EP NY+ LA +YA W + + RKLM + K PG S +
Sbjct: 511 ATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 162/354 (45%), Gaps = 8/354 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y + G + ARK+FD +R + W A + G + L L+++M+ + +++FT
Sbjct: 56 LYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFT 115
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
Y VLK+C + L++G +IH ++ + N+ V + LL +YA+ G + A F
Sbjct: 116 YGSVLKSCK----DLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQF 171
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+M ++ VSW+AMI Y N + LF M+ E P+ T S+
Sbjct: 172 DSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEG--KKPDCFTFGSLLRASIVVKC 229
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+HG ++ G +I +L+ Y +CG ++ ++ + K D++S +LI+
Sbjct: 230 LEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITG 289
Query: 241 YG-NNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
+ N A IF++MI + ++L C+ V G+ + L +I
Sbjct: 290 FSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIR 349
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 353
+ ++D+ ++ +++A+ E+M E W SL+ H N E A
Sbjct: 350 FDVALGNSLIDMYAKSGEIEDAVLAFEEMK-EKDVRSWTSLIAGYGRHGNFEKA 402
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 2/192 (1%)
Query: 84 IHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDM 143
IH N + +G+ N+ + L+D+Y K G + +A +F + ++ VSW+AMI +++
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 144 PVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVI 203
AL LF +M E D N T SV +HG + + + V
Sbjct: 94 HPDALLLFKEMHRE--DVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVR 151
Query: 204 NALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVS 263
+AL+++Y RCG++ FD +K D+VSWN++I Y N + +F+ M+ +G
Sbjct: 152 SALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKK 211
Query: 264 PSYISFITVLCA 275
P +F ++L A
Sbjct: 212 PDCFTFGSLLRA 223
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 20/164 (12%)
Query: 187 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 246
+HG + G S + + + LI +Y + G++ ++FD++ DVVSW ++IS + GY
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 247 GKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA 306
A+ +F+ M + V + ++ +VL +C G ++EG +IH +E
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEG----------MQIHGSVEKGN 143
Query: 307 C---------MVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 341
C ++ L R +++EA +L D E W +++
Sbjct: 144 CAGNLIVRSALLSLYARCGKMEEA-RLQFDSMKERDLVSWNAMI 186
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/381 (32%), Positives = 196/381 (51%), Gaps = 13/381 (3%)
Query: 6 GSLDCARKVFDETRERTIYI-WNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYV 64
G + ARKVFDE + + ++ V + L+L+R M S + + T
Sbjct: 174 GKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSF 233
Query: 65 LKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP 124
L A +S+ L + H ++ G + ++H++T L+ +Y K G IS A +F
Sbjct: 234 LSA--ISDLG--DLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAI 289
Query: 125 AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXX 184
K+ V+W+ MI YAK + + + L QM E PNS T V +
Sbjct: 290 RKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMK--PNSSTFVGLLSSCAYSEAAFVG 347
Query: 185 XXVHGFIL--RRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYG 242
V + R LD+I+ AL+ MY + G + +F+++K+ DV SW ++IS YG
Sbjct: 348 RTVADLLEEERIALDAILG--TALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYG 405
Query: 243 NNGYGKKAIQIFENMIHQG--VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
+G ++A+ +F M + V P+ I+F+ VL ACSH GLV EG F+ M+ Y P
Sbjct: 406 AHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTP 465
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
+EHY C+VDLLGRA +L+EA +LI ++P T W +LL +CR++ NA+L E L
Sbjct: 466 KVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRL 525
Query: 361 FELEPWNAGNYVLLADIYAEA 381
E+ + + +LLA +A A
Sbjct: 526 AEMGETHPADAILLAGTHAVA 546
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 163/358 (45%), Gaps = 12/358 (3%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 70
A +F+ ++++N R ++ E ++ Q+ G+ DRF++ LK+C
Sbjct: 78 ASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSC-S 136
Query: 71 SEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK-NSV 129
E V G+ +H LR G+ + L+ Y G IS A VF MP ++V
Sbjct: 137 RELCV---SIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAV 193
Query: 130 SWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHG 189
++S ++ Y + AL+LF ++ + + N T++S H
Sbjct: 194 TFSTLMNGYLQVSKKALALDLFR--IMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHV 251
Query: 190 FILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKK 249
++ GLD + +I ALI MYG+ G IS R+FD DVV+WN +I Y G ++
Sbjct: 252 LCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEE 311
Query: 250 AIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMV 309
+ + M ++ + P+ +F+ +L +C+++ G+ + + +L + RI +V
Sbjct: 312 CVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVAD-LLEEERIALDAILGTALV 370
Query: 310 DLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWN 367
D+ + L++A+++ M + W +++ H LA A + ++E N
Sbjct: 371 DMYAKVGLLEKAVEIFNRMK-DKDVKSWTAMISGYGAH---GLAREAVTLFNKMEEEN 424
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 126/280 (45%), Gaps = 45/280 (16%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G + AR++FD + + WN A G EE + L RQM + + + T
Sbjct: 271 MYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSST 330
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIH----VMTTLLDVYAKFGCISYA 116
+ +L +C SE + G+ + A++L EE I + T L+D+YAK G + A
Sbjct: 331 FVGLLSSCAYSEAAFV----GRTV-ADLLE---EERIALDAILGTALVDMYAKVGLLEKA 382
Query: 117 NSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXX 176
+F M K+ SW+AMI Y + + +A+ LF++M E C PN +T + V
Sbjct: 383 VEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACS 442
Query: 177 XXXXXXXXXXVHGFILRRGLDSIMPVINA------------LITMYGRCGEISIGERVFD 224
HG ++ G+ ++ A ++ + GR G++ E ++
Sbjct: 443 -----------HGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQL---EEAYE 488
Query: 225 KVKN----PDVVSWNSLIS---MYGNNGYGKKAIQIFENM 257
++N D +W +L++ +YGN G+ + M
Sbjct: 489 LIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEM 528
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 142/336 (42%), Gaps = 40/336 (11%)
Query: 84 IHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDM 143
IH +++ G +++ ++ LL ++ I YA+S+F + N ++ MI Y+ +D
Sbjct: 47 IHGYMVKTGLDKDDFAVSKLL-AFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDE 105
Query: 144 PVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVI 203
P +A +F+Q L A + + ++ +HG LR G +
Sbjct: 106 PERAFSVFNQ--LRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLR 163
Query: 204 NALITMYGRCGEISIGERVFDKV-KNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGV 262
NALI Y CG+IS +VFD++ ++ D V++++L++ Y A+ +F M V
Sbjct: 164 NALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEV 223
Query: 263 SPSYISFITVLCACSHAGLVEEG--------KI-------LFESMLSKYRIHPGMEH--- 304
+ + ++ L A S G + KI L +++ Y G+
Sbjct: 224 VVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARR 283
Query: 305 ------------YACMVDLLGRANRLDEAIKLIEDMPFE---PGPTVWGSLLGSCRIHCN 349
+ CM+D + L+E + L+ M +E P + + LL SC +
Sbjct: 284 IFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSC-AYSE 342
Query: 350 AELAERASAMLFELE--PWNAGNYVLLADIYAEAKM 383
A R A L E E +A L D+YA+ +
Sbjct: 343 AAFVGRTVADLLEEERIALDAILGTALVDMYAKVGL 378
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 207/413 (50%), Gaps = 7/413 (1%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMN-WSGIPSDRFT 60
Y G L + + F+ E+ + WN+ A G + L+L+ +M W PS R
Sbjct: 259 YSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIR-P 317
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYE-ENIHVMTTLLDVYAKFGCISYANSV 119
+ L C + +Q GK+IH +L+ G++ ++HV + L+D+Y K I + +
Sbjct: 318 FMSFLNFCSRNS----DIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALL 373
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
++++P N ++++ + +E+F M+ E +++ V
Sbjct: 374 YQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPE 433
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
VH ++ G + + V +LI Y + G+ + +VFD++ P++ S+I+
Sbjct: 434 SLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIIN 493
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
Y NG G +++ M + P ++ ++VL CSH+GLVEEG+++F+S+ SKY I
Sbjct: 494 GYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGIS 553
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAM 359
PG + YACMVDLLGRA +++A +L+ + W SLL SCRIH N + RA+ +
Sbjct: 554 PGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEV 613
Query: 360 LFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKK 412
L LEP N Y+ ++ Y E + + +R++ R L + G S + VK
Sbjct: 614 LMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSVVVKN 666
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 136/279 (48%), Gaps = 8/279 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y L +D A K+FDE +R + + N R G + L E+Y +M G+ + T
Sbjct: 156 LYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLT 215
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYE-ENIHVMTTLLDVYAKFGCISYANSV 119
Y Y+++ C VY +GK++H+ +++ G+ NI V L+D Y+ G +S +
Sbjct: 216 YCYMIRGCSHDRL-VY---EGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRS 271
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F A+P K+ +SW++++ A + +L+LF +M P+ +S
Sbjct: 272 FNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWG--KRPSIRPFMSFLNFCSRNS 329
Query: 180 XXXXXXXVHGFILRRGLD-SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
+H ++L+ G D S + V +ALI MYG+C I ++ + ++ NSL+
Sbjct: 330 DIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLM 389
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACS 277
+ + G K I++F MI +G ++ TVL A S
Sbjct: 390 TSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALS 428
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 145/325 (44%), Gaps = 7/325 (2%)
Query: 6 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 65
G+L A + FDE R + +N + G +ELY +M G+ T+ VL
Sbjct: 60 GNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVL 119
Query: 66 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA 125
C F ++G ++H ++ G+ N+ V + L+ +YA + A +F M
Sbjct: 120 SVCSDELFC----REGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLD 175
Query: 126 KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXX 185
+N + ++ C+ + + E++ +M LE N +T +
Sbjct: 176 RNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGV--AKNGLTYCYMIRGCSHDRLVYEGK 233
Query: 186 XVHGFILRRGLD-SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNN 244
+H +++ G + S + V N L+ Y CG++S R F+ V DV+SWNS++S+ +
Sbjct: 234 QLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADY 293
Query: 245 GYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 304
G ++ +F M G PS F++ L CS ++ GK + +L +
Sbjct: 294 GSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHV 353
Query: 305 YACMVDLLGRANRLDEAIKLIEDMP 329
+ ++D+ G+ N ++ + L + +P
Sbjct: 354 QSALIDMYGKCNGIENSALLYQSLP 378
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/361 (19%), Positives = 148/361 (40%), Gaps = 30/361 (8%)
Query: 58 RFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYAN 117
R T T C ++ F P + ++ L + ++ +D K G + A+
Sbjct: 11 RRTTTLAQHLCSLTPFIATP----RMDFSSFLEENPSDLVYTHNRRIDELIKSGNLLSAH 66
Query: 118 SVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXX 177
F M ++ V+++ +I ++ ++A+EL+ +MV +C ++ T SV
Sbjct: 67 EAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMV--SCGLRESASTFPSVLSVCSD 124
Query: 178 XXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSL 237
VH ++ G M V +AL+ +Y + + ++FD++ + ++ N L
Sbjct: 125 ELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLL 184
Query: 238 ISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYR 297
+ + G K+ +++ M +GV+ + +++ ++ CSH LV EGK L ++
Sbjct: 185 LRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGW 244
Query: 298 IHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERAS 357
+ +VD L +++ +P E W S++ C
Sbjct: 245 NISNIFVANVLVDYYSACGDLSGSMRSFNAVP-EKDVISWNSIVSVC------------- 290
Query: 358 AMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSF 417
+ G+ + D++++ + W S+R M L S I+ K+I+ +
Sbjct: 291 --------ADYGSVLDSLDLFSKMQFWGKRPSIRPFMS--FLNFCSRNSDIQSGKQIHCY 340
Query: 418 V 418
V
Sbjct: 341 V 341
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 206/414 (49%), Gaps = 16/414 (3%)
Query: 3 HELGSLDCA---RKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSG-IPSDR 58
+LG L A + ETR+ T WN+ A G E L ++ M+ G I D
Sbjct: 524 QKLGDLTSAFLRLETMSETRDLTS--WNSVISGCASSGHHLESLRAFQAMSREGKIRHDL 581
Query: 59 FTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANS 118
T L + + ++ + +G+ H ++ E + + TL+ +Y + I A
Sbjct: 582 IT----LLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVK 637
Query: 119 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
VF + N SW+ +I ++N + +LF + LE PN +T V +
Sbjct: 638 VFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE-----PNEITFVGLLSASTQL 692
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
H ++RRG + V AL+ MY CG + G +VF + +WNS+I
Sbjct: 693 GSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVI 752
Query: 239 SMYGNNGYGKKAIQIFENMIHQG-VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYR 297
S +G +G G+KA+++F+ + + P+ SFI++L ACSH+G ++EG ++ M K+
Sbjct: 753 SAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFG 812
Query: 298 IHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERAS 357
+ P EH +VD+LGRA +L EA + I + VWG+LL +C H + +L + +
Sbjct: 813 VKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVA 872
Query: 358 AMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVK 411
+LFE+EP NA Y+ LA+ Y W + +RK++ L+K+PG S I+V+
Sbjct: 873 EVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDVR 926
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 166/351 (47%), Gaps = 34/351 (9%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y + +L A VF R I WN G + L+ ++ M SG +D T
Sbjct: 232 LYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVT 291
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGY--EENIHVMTTLLDVYAKFGCISYANS 118
++ V+ AC S+ L G+ +H +++ GY E ++ V +++ +Y+K G A +
Sbjct: 292 FSCVISACS----SIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAET 347
Query: 119 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI-PNSVTMVSVXXXXXX 177
VF + ++ +S +A++ +A N M +A + +QM ++ D I P+ T+VS+
Sbjct: 348 VFEELVCRDVISSNAILNGFAANGMFEEAFGILNQM--QSVDKIQPDIATVVSITSICGD 405
Query: 178 XXXXXXXXXVHGFILRRGLDS-IMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNS 236
VHG+ +R + S + VIN++I MYG+CG + E +F + D+VSWNS
Sbjct: 406 LSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNS 465
Query: 237 LISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLC---ACSHAGLVEEGKILFESML 293
+IS + NG+ KA +F+ ++ + S S S TVL +C + +S++
Sbjct: 466 MISAFSQNGFTHKAKNLFKEVVSE-YSCSKFSLSTVLAILTSCDSS----------DSLI 514
Query: 294 SKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSC 344
+H C + LG L A +E M T W S++ C
Sbjct: 515 FGKSVH-------CWLQKLG---DLTSAFLRLETMSETRDLTSWNSVISGC 555
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 143/323 (44%), Gaps = 9/323 (2%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y G L + +FDE +E+ + +WN+ AL GR + L+ +M G D T
Sbjct: 132 YGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTL 191
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
A S++ +K +H + G + + L+++YAK +S A VF
Sbjct: 192 LLAASA----LSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFT 247
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
M ++ VSW+ ++ N P K+L+ F M ++ ++VT V
Sbjct: 248 HMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEA--DTVTFSCVISACSSIEEL 305
Query: 182 XXXXXVHGFILRRGL--DSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+HG +++ G ++ + V N++I+MY +CG+ E VF+++ DV+S N++++
Sbjct: 306 TLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILN 365
Query: 240 MYGNNGYGKKAIQIFENMIH-QGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 298
+ NG ++A I M + P + +++ C EG+ + +
Sbjct: 366 GFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQ 425
Query: 299 HPGMEHYACMVDLLGRANRLDEA 321
+E ++D+ G+ +A
Sbjct: 426 SRALEVINSVIDMYGKCGLTTQA 448
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 98/196 (50%), Gaps = 2/196 (1%)
Query: 82 KEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKN 141
+ +H L+ G +++ + LL Y + G + ++ +F + K+ + W++MI +N
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 142 DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMP 201
+ A+ LF +M+ + + +S T++ +H + GL
Sbjct: 167 GRYIAAVGLFIEMIHKGNE--FDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSS 224
Query: 202 VINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG 261
+ NAL+ +Y + +S E VF +++ D+VSWN++++ NG+ +K++Q F++M G
Sbjct: 225 LCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSG 284
Query: 262 VSPSYISFITVLCACS 277
++F V+ ACS
Sbjct: 285 QEADTVTFSCVISACS 300
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 112/273 (41%), Gaps = 35/273 (12%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY ++ A KVF + + WN AL+ G E+ +L+R + + + T
Sbjct: 625 MYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK---LEPNEIT 681
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ +L A + Y +Q H +++R G++ N V L+D+Y+ G + VF
Sbjct: 682 FVGLLSASTQLGSTSYGMQA----HCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVF 737
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
R + +W+++I + + M KA+ELF ++ + + PN + +S+
Sbjct: 738 RNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNS-EMEPNKSSFISLLSACS---- 792
Query: 181 XXXXXXVHGFILRRGLD---------SIMPVINA---LITMYGRCGEISIGERVFDKVKN 228
H + GL + PV ++ M GR G++ +
Sbjct: 793 -------HSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGE 845
Query: 229 PDVVS-WNSLISM---YGNNGYGKKAIQIFENM 257
P W +L+S +G+ GK+ ++ M
Sbjct: 846 PQKAGVWGALLSACNYHGDTKLGKEVAEVLFEM 878
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 205/415 (49%), Gaps = 22/415 (5%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G L + +VF+ E+ + WNA G+G+E L ++ M + FT
Sbjct: 128 MYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFT 187
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ V+K C S+ LQ+GK++HA ++ G + + + T ++ Y+ G I+ A V+
Sbjct: 188 LSSVVKTCA----SLKILQQGKQVHAMVVVTG-RDLVVLGTAMISFYSSVGLINEAMKVY 242
Query: 121 RAMPA-KNSVSWSAMI-GCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
++ + V +++I GC + L + Q PN + S
Sbjct: 243 NSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQR--------PNVRVLSSSLAGCSDN 294
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 238
+H LR G S + N L+ MYG+CG+I +F + + VVSW S+I
Sbjct: 295 SDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMI 354
Query: 239 SMYGNNGYGKKAIQIFENMIHQG--VSPSYISFITVLCACSHAGLVEEGKILFESMLSKY 296
Y NG G KA++IF M +G V P+ ++F+ V+ AC+HAGLV+EGK F M KY
Sbjct: 355 DAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKY 414
Query: 297 RIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPT----VWGSLLGSCRIHCNAEL 352
R+ PG EHY C +D+L +A +E +L+E M + +W ++L +C ++ +
Sbjct: 415 RLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTR 474
Query: 353 AER-ASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCS 406
E A ++ E P NA YVL+++ YA W V+ +R + + L K G S
Sbjct: 475 GEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 112/230 (48%), Gaps = 8/230 (3%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 70
A +FDE +R + N+ + G + L L+ Q++ + T+T VL AC
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGAC-- 94
Query: 71 SEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVS 130
YP + G+++HA +++ G E T L+D+Y+K+G + + VF ++ K+ VS
Sbjct: 95 -SLLSYP-ETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVS 152
Query: 131 WSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGF 190
W+A++ + +N +AL +F M E + + T+ SV VH
Sbjct: 153 WNALLSGFLRNGKGKEALGVFAAMYRERVE--ISEFTLSSVVKTCASLKILQQGKQVHAM 210
Query: 191 ILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK-NPDVVSWNSLIS 239
++ G D ++ + A+I+ Y G I+ +V++ + + D V NSLIS
Sbjct: 211 VVVTGRDLVV-LGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLIS 259
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 108/231 (46%), Gaps = 4/231 (1%)
Query: 114 SYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXX 173
++A+ +F +P ++ S ++ + + ++ P L LF Q+ + D +S T V
Sbjct: 35 THADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPD--LSSHTFTPVLG 92
Query: 174 XXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVS 233
VH ++++G ++ ALI MY + G + RVF+ V+ D+VS
Sbjct: 93 ACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVS 152
Query: 234 WNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESML 293
WN+L+S + NG GK+A+ +F M + V S + +V+ C+ ++++GK + ++
Sbjct: 153 WNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVV 212
Query: 294 SKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSC 344
R + M+ ++EA+K+ + + SL+ C
Sbjct: 213 VTGRDLVVLG--TAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGC 261
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 191 bits (486), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 125/432 (28%), Positives = 209/432 (48%), Gaps = 29/432 (6%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFF-------RALAMVGRGEELLELYRQMNWSG 53
MY + G + ARKVFDE ER + WNA A+ G EE+ + W
Sbjct: 90 MYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIE 149
Query: 54 IPSDRFTYTYVLKACVVSE---------------FSVYPLQKGKEIHANILRHGYEENIH 98
+ + KA + E VY + E E+N
Sbjct: 150 MIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAF 209
Query: 99 VMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEA 158
V + ++ Y + G + A ++F + A++ V W+ +I YA+N A++ F M E
Sbjct: 210 VWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEG 269
Query: 159 CDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISI 218
+ P++VT+ S+ VH I RG++ V NALI MY +CG++
Sbjct: 270 YE--PDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLEN 327
Query: 219 GERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSH 278
VF+ + V NS+IS +G GK+A+++F M + P I+FI VL AC H
Sbjct: 328 ATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVH 387
Query: 279 AGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWG 338
G + EG +F M ++ + P ++H+ C++ LLGR+ +L EA +L+++M +P TV G
Sbjct: 388 GGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLG 446
Query: 339 SLLGSCRIHCNAELAERASAMLFE----LEPWNAGNYVLLADIYAEAKMWSDVKSVRKLM 394
+LLG+C++H + E+AE+ ++ ++ + ++++YA + W +++R M
Sbjct: 447 ALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEM 506
Query: 395 GKRVLQKVPGCS 406
KR L+K PG S
Sbjct: 507 EKRGLEKSPGLS 518
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 124/288 (43%), Gaps = 34/288 (11%)
Query: 67 ACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK 126
ACVV + GK +H+ ++ G ++ V ++L+ +Y K GC+ A VF MP +
Sbjct: 56 ACVVPRVVL-----GKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPER 110
Query: 127 NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXX 186
N +W+AMIG Y N V A LF + + C + + M+
Sbjct: 111 NVATWNAMIGGYMSNGDAVLASGLFEE--ISVCRNTVTWIEMIKGYGKRIEIEKARELFE 168
Query: 187 VHGFILR---------------------RGLDSIMPVINALI-----TMYGRCGEISIGE 220
F L+ R +P NA + + Y R G++
Sbjct: 169 RMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEAR 228
Query: 221 RVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAG 280
+F +V D+V WN+LI+ Y NGY AI F NM +G P ++ ++L AC+ +G
Sbjct: 229 AIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSG 288
Query: 281 LVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 328
++ G+ + S+++ I ++D+ + L+ A + E +
Sbjct: 289 RLDVGREV-HSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESI 335
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 84/155 (54%), Gaps = 7/155 (4%)
Query: 187 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 246
+H ++ G+ S + V ++LI+MYG+CG + +VFD++ +V +WN++I Y +NG
Sbjct: 68 LHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGD 127
Query: 247 GKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA 306
A +FE + V + +++I ++ +E+ + LFE M + + ++ ++
Sbjct: 128 AVLASGLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELK---NVKAWS 181
Query: 307 CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 341
M+ + ++++A K ED+P E VW ++
Sbjct: 182 VMLGVYVNNRKMEDARKFFEDIP-EKNAFVWSLMM 215
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 178/346 (51%), Gaps = 15/346 (4%)
Query: 78 LQKGKEIHANILRHGY-EENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIG 136
L+ G+ +H + + G+ E+ + TTLL YAK G + YA VF MP + SV+W+AMIG
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 137 CYAK-----NDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFI 191
Y N KA+ LF + P TMV V VHG+I
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 192 LRRGLDSIMPVI--NALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKK 249
+ G + V AL+ MY +CG ++ VF+ +K +V +W S+ + NG G +
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNE 306
Query: 250 AIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMV 309
+ M G+ P+ I+F ++L A H GLVEEG LF+SM +++ + P +EHY C+V
Sbjct: 307 TPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIV 366
Query: 310 DLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAG 369
DLLG+A R+ EA + I MP +P + SL +C I+ + E L E+E +
Sbjct: 367 DLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEK 426
Query: 370 -------NYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWI 408
+YV L+++ A W +V+ +RK M +R ++ PG S++
Sbjct: 427 LSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 141/354 (39%), Gaps = 79/354 (22%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVG-----------RGEELLELYRQMN 50
Y + G L ARKVFDE ERT WN AM+G + + L+R+ +
Sbjct: 157 YAKNGDLRYARKVFDEMPERTSVTWN------AMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 51 WSGI---PSDRFTYTYVLKACVVSEFSVYP-LQKGKEIHANILRHGY--EENIHVMTTLL 104
G P+D CV+S S L+ G +H I + G+ E ++ + T L+
Sbjct: 211 CCGSGVRPTD------TTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALV 264
Query: 105 DVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPN 164
D+Y+K GC++ A SVF M KN +W++M A N + L ++M PN
Sbjct: 265 DMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIK--PN 322
Query: 165 SVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFD 224
+T S L++ Y G + G +F
Sbjct: 323 EITFTS-----------------------------------LLSAYRHIGLVEEGIELFK 347
Query: 225 KVK-----NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHA 279
+K P + + ++ + G G ++A Q ++ + P I ++ ACS
Sbjct: 348 SMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQF---ILAMPIKPDAILLRSLCNACSIY 404
Query: 280 GLVEEGKILFESMLSKYRIHPGM-----EHYACMVDLLGRANRLDEAIKLIEDM 328
G G+ + +++L R + E Y + ++L + E KL ++M
Sbjct: 405 GETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEM 458
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 5/127 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G L+ A VF+ + + ++ W + LA+ GRG E L +M SGI + T
Sbjct: 266 MYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEIT 325
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANI-LRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
+T +L A + +++G E+ ++ R G I ++D+ K G I A
Sbjct: 326 FTSLLSAYR----HIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQF 381
Query: 120 FRAMPAK 126
AMP K
Sbjct: 382 ILAMPIK 388
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 205/429 (47%), Gaps = 40/429 (9%)
Query: 23 IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGK 82
+Y N F+A + ++ L Y + G D +T+ ++ +C+ V GK
Sbjct: 83 LYCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLI-SCIEKTCCV---DSGK 138
Query: 83 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYA---------------NSV-------- 119
H ++HG ++ + V +L+ +Y G + A NS+
Sbjct: 139 MCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNG 198
Query: 120 --------FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 171
F MP KN +SW+ MI Y + P ++ LF +MV N T+V +
Sbjct: 199 DVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQG--NESTLVLL 256
Query: 172 XXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDV 231
VH ++R L+S + + ALI MYG+C E+ + R+FD + +
Sbjct: 257 LNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNK 316
Query: 232 VSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFES 291
V+WN +I + +G + +++FE MI+ + P ++F+ VLC C+ AGLV +G+ +
Sbjct: 317 VTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSL 376
Query: 292 MLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFE---PGPTVWGSLLGSCRIHC 348
M+ +++I P H CM +L A +EA + ++++P E P T W +LL S R
Sbjct: 377 MVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTG 436
Query: 349 NAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWI 408
N L E + L E +P N Y LL +IY+ W DV VR+++ +R + ++PGC +
Sbjct: 437 NPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLV 496
Query: 409 EVKKKIYSF 417
++K+ ++
Sbjct: 497 DLKEIVHGL 505
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 6/166 (3%)
Query: 6 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 65
G + A K+FDE ++ I WN A + L+R+M +G + T +L
Sbjct: 198 GDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLL 257
Query: 66 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA 125
AC S L++G+ +HA+++R ++ + T L+D+Y K + A +F ++
Sbjct: 258 NACGRSA----RLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSI 313
Query: 126 KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 171
+N V+W+ MI + + P LELF M+ P+ VT V V
Sbjct: 314 RNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLR--PDEVTFVGV 357
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/376 (30%), Positives = 183/376 (48%), Gaps = 45/376 (11%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y + G+L+ +R FD R++ I WNA A G L L+ QM G +T+
Sbjct: 361 YAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYAN-KDGPICLSLFLQMLQMGFRPTEYTF 419
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCIS------- 114
+ LK+C V+E +++H+ I+R GYE+N +V+++L+ YAK ++
Sbjct: 420 STALKSCCVTEL--------QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLD 471
Query: 115 -----------------------YANSV--FRAMPAKNSVSWSAMIGCYAKNDMPVKALE 149
Y SV + ++VSW+ I +++D + +E
Sbjct: 472 WASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIE 531
Query: 150 LFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMP-VINALIT 208
LF M+ + P+ T VS+ +HG I + V N LI
Sbjct: 532 LFKHMLQS--NIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLID 589
Query: 209 MYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYIS 268
MYG+CG I +VF++ + ++++W +LIS G +GYG++A++ F+ + G P +S
Sbjct: 590 MYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVS 649
Query: 269 FITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 328
FI++L AC H G+V+EG LF+ M Y + P M+HY C VDLL R L EA LI +M
Sbjct: 650 FISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREM 708
Query: 329 PFEPGPTVWGSLLGSC 344
PF VW + L C
Sbjct: 709 PFPADAPVWRTFLDGC 724
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 165/371 (44%), Gaps = 35/371 (9%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y L L+ A +VF++ +++ WN L G +E + +R++ G +
Sbjct: 158 LYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESS 217
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ VLK V L K++H + + G + I V+ +L+ Y K G A +F
Sbjct: 218 FLGVLKGVSC----VKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMF 273
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+ + + VSW+A+I AK++ P+KAL+LF M PN T VSV
Sbjct: 274 QDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFS--PNQGTYVSVLGVSSLVQL 331
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+HG +++ G ++ + + NALI Y +CG + FD +++ ++V WN+L+S
Sbjct: 332 LSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSG 391
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACS-------HAGLV----EEGKILF 289
Y N G + +F M+ G P+ +F T L +C H+ +V E+ +
Sbjct: 392 YANKD-GPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVL 450
Query: 290 ESMLSKYRIHPGMEHYACMVD----------------LLGRANRLDEAIKLIEDMPFEPG 333
S++ Y + M ++D + R + E++KLI + +P
Sbjct: 451 SSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE-QPD 509
Query: 334 PTVWGSLLGSC 344
W + +C
Sbjct: 510 TVSWNIAIAAC 520
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 157/342 (45%), Gaps = 11/342 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y +LG + A KVFD+ ER +N + + G ++ ++ +M + G ++ T
Sbjct: 58 LYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQST 117
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHG-YEENIHVMTTLLDVYAKFGCISYANSV 119
+ +L + ++ G ++H L++G + + V T LL +Y + + A V
Sbjct: 118 VSGLLSCASLD------VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQV 171
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F MP K+ +W+ M+ + + F ++V +S + V
Sbjct: 172 FEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESS--FLGVLKGVSCVK 229
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
+H ++GLD + V+N+LI+ YG+CG + ER+F + D+VSWN++I
Sbjct: 230 DLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIIC 289
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
+ KA+++F +M G SP+ ++++VL S L+ G+ + ML K
Sbjct: 290 ATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQI-HGMLIKNGCE 348
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 341
G+ ++D + L+++ +L D + W +LL
Sbjct: 349 TGIVLGNALIDFYAKCGNLEDS-RLCFDYIRDKNIVCWNALL 389
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 90/182 (49%), Gaps = 9/182 (4%)
Query: 95 ENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQM 154
+ ++V ++ +Y K G +S A VF MP +N VS++ +I Y+K KA +F +M
Sbjct: 47 QPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEM 106
Query: 155 VLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGL---DSIMPVINALITMYG 211
+PN T+ + +HG L+ GL D+ V L+ +YG
Sbjct: 107 --RYFGYLPNQSTVSGL--LSCASLDVRAGTQLHGLSLKYGLFMADAF--VGTCLLCLYG 160
Query: 212 RCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFIT 271
R + + E+VF+ + + +WN ++S+ G+ G+ K+ + F ++ G S + SF+
Sbjct: 161 RLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLG 220
Query: 272 VL 273
VL
Sbjct: 221 VL 222
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + GS+ KVF+ETRE+ + W A L + G G+E LE +++ G DR +
Sbjct: 590 MYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVS 649
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ +L AC +++G + + +G E + +D+ A+ G + A +
Sbjct: 650 FISILTACRHGGM----VKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLI 705
Query: 121 RAMP 124
R MP
Sbjct: 706 REMP 709
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 8/145 (5%)
Query: 202 VINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG 261
V N +I++Y + GE+S+ +VFD++ + VS+N++I Y G KA +F M + G
Sbjct: 51 VCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFG 110
Query: 262 VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA-CMVDLLGRANRLDE 320
P+ S ++ L +C A L + KY + C++ L GR + L+
Sbjct: 111 YLPNQ-STVSGLLSC--ASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEM 167
Query: 321 AIKLIEDMPFEPGPTVWG---SLLG 342
A ++ EDMPF+ T W SLLG
Sbjct: 168 AEQVFEDMPFKSLET-WNHMMSLLG 191
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 206/429 (48%), Gaps = 13/429 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY LG D A VF +R + WN + + G E L+ + M I D +T
Sbjct: 178 MYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYT 237
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+ V+ C + L KGK+ A ++ G+ N V+ +D+++K + + +F
Sbjct: 238 VSMVVSICS----DLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLF 293
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI-PNSVTMVSVXXXXXXXX 179
R + +SV ++MIG Y+ + AL LF +L S+ P+ T SV
Sbjct: 294 RELEKWDSVLCNSMIGSYSWHCCGEDALRLF---ILAMTQSVRPDKFTFSSVLSSMNAVM 350
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
VH +++ G D V +L+ MY + G + + VF K D++ WN++I
Sbjct: 351 LDHGAD-VHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIM 409
Query: 240 MYGNNGYGKKAIQIFENMI-HQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 298
N +++ IF ++ +Q + P ++ + +L AC +AG V EG +F SM + +
Sbjct: 410 GLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGV 469
Query: 299 HPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASA 358
+PG EHYAC+++LL R ++EA + + +PFEP +W +L + + LAE +
Sbjct: 470 NPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAK 529
Query: 359 MLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFV 418
+ E EP ++ Y++L IY W + +R M + L+ G S I ++ ++SF
Sbjct: 530 TMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSF- 588
Query: 419 SSEEDNPQI 427
E D QI
Sbjct: 589 --EADQLQI 595
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 14/273 (5%)
Query: 6 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYV- 64
G L+ A +FDE ER + WN L G E + ++ M I FT++ +
Sbjct: 84 GYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILA 143
Query: 65 -LKACVVSEFSVYPLQKGKEIHANILRHGYEE-NIHVMTTLLDVYAKFGCISYANSVFRA 122
L CV + G++IH N + G N+ V +++D+Y + G YA SVF
Sbjct: 144 SLVTCV---------RHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLT 194
Query: 123 MPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXX 182
M ++ VSW+ +I + +D K + L ++ + P+ T+ V
Sbjct: 195 MEDRDVVSWNCLI--LSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELS 252
Query: 183 XXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYG 242
++ G S V+ A I M+ +C + ++F +++ D V NS+I Y
Sbjct: 253 KGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYS 312
Query: 243 NNGYGKKAIQIFENMIHQGVSPSYISFITVLCA 275
+ G+ A+++F + Q V P +F +VL +
Sbjct: 313 WHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS 345
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 121/302 (40%), Gaps = 29/302 (9%)
Query: 81 GKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAK 140
K +HA +L G+ + L +Y K G + A +F +P KN+++W+ + K
Sbjct: 23 AKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFK 82
Query: 141 NDMPVKALELFHQM----VLEACDSIPNSV----------------------TMVSVXXX 174
N AL+LF +M V+ I V T +
Sbjct: 83 NGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSIL 142
Query: 175 XXXXXXXXXXXXVHGFILRRGLDSIMPVI-NALITMYGRCGEISIGERVFDKVKNPDVVS 233
+HG + G+ V+ N+++ MY R G VF +++ DVVS
Sbjct: 143 ASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVS 202
Query: 234 WNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESML 293
WN LI ++G + A+ F M + P + V+ CS + +GK ++
Sbjct: 203 WNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQAL-ALC 261
Query: 294 SKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 353
K +D+ + NRLD+++KL ++ + + S++GS HC E A
Sbjct: 262 IKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELE-KWDSVLCNSMIGSYSWHCCGEDA 320
Query: 354 ER 355
R
Sbjct: 321 LR 322
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 170/351 (48%), Gaps = 16/351 (4%)
Query: 187 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 246
VH FI S + N++I MY CG + VF+ + ++ +W +I + NG
Sbjct: 203 VHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQ 262
Query: 247 GKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA 306
G+ AI F +G P F + AC G + EG + FESM +Y I P MEHY
Sbjct: 263 GEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYV 322
Query: 307 CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPW 366
+V +L LDEA++ +E M EP +W +L+ R+H + L +R M+ +L+
Sbjct: 323 SLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDA- 379
Query: 367 NAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQ 426
+ + E+K L+ +++ + G ++ I + + P+
Sbjct: 380 --------SRLNKESKAGLVPVKSSDLVKEKLQRMAKGPNY-----GIRYMAAGDISRPE 426
Query: 427 IEKLRALLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLINTVKGE 486
+L L L M E GY P + + +D+D+ K+ L H+E+ A ++T
Sbjct: 427 NRELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARS 486
Query: 487 TIRITKNLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
IR+ KNLR+C DCH K +SK RE++ RD RFH +DGVCSC EYW
Sbjct: 487 LIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 163/324 (50%), Gaps = 6/324 (1%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+Y + G + R+VF +++R W A A GR ++ L M G D T
Sbjct: 361 LYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVT 420
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
VL C + +++GKEIH L++ + N+ ++T+L+ +Y+K G Y +F
Sbjct: 421 IATVLPVCA----ELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLF 476
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+ +N +W+AMI CY +N +E+F M+L P+SVTM V
Sbjct: 477 DRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLS--KHRPDSVTMGRVLTVCSDLKA 534
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+HG IL++ +SI V +I MYG+CG++ FD V ++W ++I
Sbjct: 535 LKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEA 594
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
YG N + AI FE M+ +G +P+ +F VL CS AG V+E F ML Y + P
Sbjct: 595 YGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQP 654
Query: 301 GMEHYACMVDLLGRANRLDEAIKL 324
EHY+ +++LL R R++EA +L
Sbjct: 655 SEEHYSLVIELLNRCGRVEEAQRL 678
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 145/289 (50%), Gaps = 8/289 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVG--RGEELLELYRQMNWSGIPSDR 58
MY GS+ A+KVFDE+ +Y WNA R + G R +++L + +M G+ +
Sbjct: 155 MYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNV 214
Query: 59 FTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANS 118
++ + V K+ L++G + HA +++G ++ + T+L+D+Y K G + A
Sbjct: 215 YSLSNVFKSFA----GASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARR 270
Query: 119 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
VF + ++ V W AMI A N +AL LF M+ E PNSV + ++
Sbjct: 271 VFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEE-KIYPNSVILTTILPVLGDV 329
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINA-LITMYGRCGEISIGERVFDKVKNPDVVSWNSL 237
VH +L+ P +++ LI +Y +CG+++ G RVF K + +SW +L
Sbjct: 330 KALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTAL 389
Query: 238 ISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGK 286
+S Y NG +A++ M +G P ++ TVL C+ +++GK
Sbjct: 390 MSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGK 438
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 119/266 (44%), Gaps = 9/266 (3%)
Query: 24 YIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKE 83
YI + + A E L + + GIP + T++ +L+ACV + L GK+
Sbjct: 77 YIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRK----SLLHGKQ 132
Query: 84 IHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMI--GCYAKN 141
+H +I +G E N + T L+ +Y G + A VF + N SW+A++ +
Sbjct: 133 VHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGK 192
Query: 142 DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMP 201
L F +M D N ++ +V H ++ GL + +
Sbjct: 193 KRYQDVLSTFTEMRELGVDL--NVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVF 250
Query: 202 VINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMI-HQ 260
+ +L+ MY +CG++ + RVFD++ D+V W ++I+ +N +A+ +F MI +
Sbjct: 251 LKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEE 310
Query: 261 GVSPSYISFITVLCACSHAGLVEEGK 286
+ P+ + T+L ++ GK
Sbjct: 311 KIYPNSVILTTILPVLGDVKALKLGK 336
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 202/409 (49%), Gaps = 11/409 (2%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y + G + A K+F + + +WN G ++ + L+ M G + +T
Sbjct: 151 YSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTM 210
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
+ + L +HA L+ + + +V L+++Y++ CI+ A SVF
Sbjct: 211 VALTSGLIDPSL----LLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFN 266
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
++ + V+ S++I Y++ +AL LF ++ + P+ V + V
Sbjct: 267 SISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSG--KKPDCVLVAIVLGSCAELSDS 324
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY 241
VH +++R GL+ + V +ALI MY +CG + +F + ++VS+NSLI
Sbjct: 325 VSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGL 384
Query: 242 GNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPG 301
G +G+ A + F ++ G+ P I+F +LC C H+GL+ +G+ +FE M S++ I P
Sbjct: 385 GLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQ 444
Query: 302 MEHYACMVDLLGRANRLDEAIKLIEDM--PFEPGPTVWGSLLGSCRIHCNAELAERASAM 359
EHY MV L+G A +L+EA + + + P + G + G+LL C +H N LAE +
Sbjct: 445 TEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSG--ILGALLSCCEVHENTHLAEVVAEN 502
Query: 360 LFELEPWNAGNY-VLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSW 407
+ + Y V+L+++YA W +V+ +R + + K+PG SW
Sbjct: 503 IHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISW 551
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 156/348 (44%), Gaps = 18/348 (5%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 70
ARK+FD ER++++WN+ RA A + +L L+ Q+ S D FTY AC+
Sbjct: 59 ARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTY-----ACLA 113
Query: 71 SEFSVYPLQKG-KEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSV 129
FS KG + IH + G + + ++ Y+K G I A+ +F ++P +
Sbjct: 114 RGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLA 173
Query: 130 SWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHG 189
W+ MI Y K + LF+ M + PN TMV++ VH
Sbjct: 174 LWNVMILGYGCCGFWDKGINLFNLM--QHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHA 231
Query: 190 FILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKK 249
F L+ LDS V AL+ MY RC I+ VF+ + PD+V+ +SLI+ Y G K+
Sbjct: 232 FCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKE 291
Query: 250 AIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH----Y 305
A+ +F + G P + VL +C+ GK + Y I G+E
Sbjct: 292 ALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGK-----EVHSYVIRLGLELDIKVC 346
Query: 306 ACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 353
+ ++D+ + L A+ L +P E + SL+ +H A A
Sbjct: 347 SALIDMYSKCGLLKCAMSLFAGIP-EKNIVSFNSLILGLGLHGFASTA 393
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 91/207 (43%), Gaps = 7/207 (3%)
Query: 82 KEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKN 141
+++H+ + + + + T L YA + A +F P ++ W+++I YAK
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 142 DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMP 201
L LF Q++ D+ P++ T + +HG + GL
Sbjct: 85 HQFTTVLSLFSQILRS--DTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQI 142
Query: 202 VINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG 261
+A++ Y + G I ++F + +PD+ WN +I YG G+ K I +F M H+G
Sbjct: 143 CGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRG 202
Query: 262 VSPSYISFITVLCACSHAGLVEEGKIL 288
P+ + + + +GL++ +L
Sbjct: 203 HQPNCYTMVALT-----SGLIDPSLLL 224
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 6/171 (3%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + A VF+ E + ++ + G +E L L+ ++ SG D
Sbjct: 251 MYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVL 310
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
VL +C SV GKE+H+ ++R G E +I V + L+D+Y+K G + A S+F
Sbjct: 311 VAIVLGSCAELSDSV----SGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLF 366
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 171
+P KN VS++++I + A E F + +LE IP+ +T ++
Sbjct: 367 AGIPEKNIVSFNSLILGLGLHGFASTAFEKFTE-ILEM-GLIPDEITFSAL 415
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 192/402 (47%), Gaps = 46/402 (11%)
Query: 5 LGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPS-DRFTYTY 63
G A VF++ + + + WN R+L++ + E L L+ M S D+FT+ +
Sbjct: 65 FGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPF 124
Query: 64 VLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAK-------------- 109
V+KAC+ S ++ G ++H ++ G+ ++ TL+D+Y K
Sbjct: 125 VIKACLASS----SIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKM 180
Query: 110 ------------FGCIS-----YANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFH 152
+G +S A VF MP +N VSW+AMI Y KN P +A +LF
Sbjct: 181 PGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFR 240
Query: 153 QMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRG--LDSIMPVINALITMY 210
+M ++ D PN T+V++ VH + + G LD + ALI MY
Sbjct: 241 RMQVD--DVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGT--ALIDMY 296
Query: 211 GRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG-VSPSYISF 269
+CG + +VFD ++ + +WNS+I+ G +G G++A+ +FE M + V P I+F
Sbjct: 297 SKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITF 356
Query: 270 ITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMP 329
+ VL AC++ G V++G F M+ Y I P EH ACM+ LL +A +++A L+E M
Sbjct: 357 VGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMD 416
Query: 330 FEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNY 371
+P + S G+ E E S W+ G +
Sbjct: 417 SDPD---FNSSFGNEYTDGMNETNETPSQHQIMFTKWDTGRF 455
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 138/323 (42%), Gaps = 41/323 (12%)
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
+Y L+ C S FS + K+IH I++H + ++ L+ V + FG YA+ VF
Sbjct: 24 SYFLRTC--SNFS-----QLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFN 76
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
+ + ++ +W+ MI + N P +AL LF M++ + S + T V
Sbjct: 77 QLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMI-SHQSQFDKFTFPFVIKACLASSSI 135
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDK---------------- 225
VHG ++ G + + N L+ +Y +CG+ G +VFDK
Sbjct: 136 RLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGL 195
Query: 226 VKNP---------------DVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFI 270
V N +VVSW ++I+ Y N +A Q+F M V P+ + +
Sbjct: 196 VSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIV 255
Query: 271 TVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPF 330
+L A + G + G+ + + + A ++D+ + L +A K+ + M
Sbjct: 256 NLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTA-LIDMYSKCGSLQDARKVFDVMQG 314
Query: 331 EPGPTVWGSLLGSCRIHCNAELA 353
+ T W S++ S +H E A
Sbjct: 315 KSLAT-WNSMITSLGVHGCGEEA 336
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELY-RQMNWSGIPSDRF 59
MY + GSL ARKVFD + +++ WN+ +L + G GEE L L+ + + D
Sbjct: 295 MYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAI 354
Query: 60 TYTYVLKAC 68
T+ VL AC
Sbjct: 355 TFVGVLSAC 363
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 184/400 (46%), Gaps = 42/400 (10%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPS---- 56
MY + L+ AR+VFD+TR + + W + AM G E EL+ M I S
Sbjct: 307 MYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAM 366
Query: 57 ---------------------------DRFTYTYVLKACVVSEFSVYPLQKGKEIHANIL 89
D T ++L C + +Q GK+ H I
Sbjct: 367 LGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCS----GISDVQMGKQAHGFIY 422
Query: 90 RHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA-KNSVSWSAMIGCYAKNDMPVKAL 148
RHGY+ N+ V LLD+Y K G + AN FR M ++ VSW+A++ A+ +AL
Sbjct: 423 RHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQAL 482
Query: 149 ELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALIT 208
F M +EA P+ T+ ++ +HGF++R G + + A++
Sbjct: 483 SFFEGMQVEA---KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVD 539
Query: 209 MYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYIS 268
MY +C VF + D++ WNS+I NG K+ ++F + ++GV P +++
Sbjct: 540 MYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVT 599
Query: 269 FITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 328
F+ +L AC G VE G F SM +KY I P +EHY CM++L + L + + + M
Sbjct: 600 FLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLM 659
Query: 329 PFEPGPTVWGSLLGSCRIHCNAELAERASAMLFE---LEP 365
PF+P + + +C+ + ++L A+ L L+P
Sbjct: 660 PFDPPMQMLTRINDACQRYRWSKLGAWAAKRLMNDHYLQP 699
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 135/261 (51%), Gaps = 6/261 (2%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y + G +D AR++F+E ER WNA A A G +E+ ++R+MN G+ + ++
Sbjct: 106 YGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSF 165
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
VLK+C + + L+ +++H ++++GY N+ + T+++DVY K +S A VF
Sbjct: 166 AGVLKSCGL----ILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFD 221
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
+ + VSW+ ++ Y + +A+ +F +M+ + P + T+ SV
Sbjct: 222 EIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKML--ELNVRPLNHTVSSVMLACSRSLAL 279
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY 241
+H ++ + + V ++ MY +C + RVFD+ ++ D+ SW S +S Y
Sbjct: 280 EVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGY 339
Query: 242 GNNGYGKKAIQIFENMIHQGV 262
+G ++A ++F+ M + +
Sbjct: 340 AMSGLTREARELFDLMPERNI 360
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 161/369 (43%), Gaps = 44/369 (11%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 70
AR+VFDE + WN R +G +E + ++ +M + T + V+ AC
Sbjct: 216 ARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSR 275
Query: 71 SEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAK--------------------- 109
S L+ GK IHA ++ + V T++ D+Y K
Sbjct: 276 S----LALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKS 331
Query: 110 ----------FGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEAC 159
G A +F MP +N VSW+AM+G Y +AL+ F ++ +
Sbjct: 332 WTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALD-FLTLMRQEI 390
Query: 160 DSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIG 219
++I N VT+V + HGFI R G D+ + V NAL+ MYG+CG +
Sbjct: 391 ENIDN-VTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSA 449
Query: 220 ERVFDKVKN-PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSH 278
F ++ D VSWN+L++ G ++A+ FE M + PS + T+L C++
Sbjct: 450 NIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCAN 508
Query: 279 AGLVEEGKILFESMLSK-YRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVW 337
+ GK + ++ Y+I + MVD+ + D AI++ ++ +W
Sbjct: 509 IPALNLGKAIHGFLIRDGYKIDVVIR--GAMVDMYSKCRCFDYAIEVFKEAATRD-LILW 565
Query: 338 GSLL-GSCR 345
S++ G CR
Sbjct: 566 NSIIRGCCR 574
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 173/393 (44%), Gaps = 26/393 (6%)
Query: 55 PSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCIS 114
P + Y + ++C V + +++ ++++ I ++ ++ Y K GC+
Sbjct: 58 PVSYWLYERLFRSCSSKALVV----QARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVD 113
Query: 115 YANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXX 174
A +F MP ++ SW+A+I A+N + + +F +M + + S V
Sbjct: 114 DARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETS--FAGVLKS 171
Query: 175 XXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSW 234
+H +++ G + + +++ +YG+C +S RVFD++ NP VSW
Sbjct: 172 CGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSW 231
Query: 235 NSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLS 294
N ++ Y G+ +A+ +F M+ V P + +V+ ACS + +E GK++ ++
Sbjct: 232 NVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVI-HAIAV 290
Query: 295 KYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAE 354
K + + D+ + +RL+ A ++ D W S + + + L
Sbjct: 291 KLSVVADTVVSTSVFDMYVKCDRLESARRVF-DQTRSKDLKSWTSAMSG---YAMSGLT- 345
Query: 355 RASAMLFELEP------WNA--GNYVLLADIYAEA-----KMWSDVKSVRKLMGKRVLQK 401
R + LF+L P WNA G YV A + EA M +++++ + +L
Sbjct: 346 REARELFDLMPERNIVSWNAMLGGYV-HAHEWDEALDFLTLMRQEIENIDNVTLVWILNV 404
Query: 402 VPGCSWIEVKKKIYSFVSSEEDNPQIEKLRALL 434
G S +++ K+ + F+ + + ALL
Sbjct: 405 CSGISDVQMGKQAHGFIYRHGYDTNVIVANALL 437
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 161/340 (47%), Gaps = 28/340 (8%)
Query: 204 NALITMYGRCGEISIGERVFDKVKNPDVVSWNS-----LISMYGNNGYGKKAIQIFENMI 258
NA+I MY C + +VF+++ WNS ++ + NNGYG++AI +F
Sbjct: 158 NAIIEMYSGCCSVDDALKVFEEMP-----EWNSGTLCVMMRCFVNNGYGEEAIDLFTRFK 212
Query: 259 HQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRL 318
+G P+ F V C+ G V+EG + F++M +Y I P MEHY + +L + L
Sbjct: 213 EEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHL 272
Query: 319 DEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIY 378
DEA+ +E MP EP VW +L+ R+H + EL +R + ++ +L+
Sbjct: 273 DEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDATRL---------- 322
Query: 379 AEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYS-FVSSEEDNPQIEKLRALLIKL 437
D S L+ + V + YS F + +PQ+ + L+ L
Sbjct: 323 -------DKVSSAGLVATKASDFVKKEPSTRSEPYFYSTFRPVDSSHPQMNIIYETLMSL 375
Query: 438 STEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLINTVKGETIRITKNLRLC 497
+++KE GY P T + E + + G+ E++AV L+ + I + N+R+
Sbjct: 376 RSQLKEMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLTNIRIV 435
Query: 498 EDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
DCH K +S R+++ RD +H F++GVC C W
Sbjct: 436 GDCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 160/339 (47%), Gaps = 35/339 (10%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
+ ++ L+ ARK FD E+++ WNA A G E+ L L+ M G+ + T+
Sbjct: 208 FAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTW 267
Query: 62 TYVLKACVVS-----EFSVYPLQKGKEIHANIL-----------------------RHGY 93
V+ AC S+ L K + N G
Sbjct: 268 VIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGT 327
Query: 94 EENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQ 153
+ N+ ++ Y + G +S A +F MP +N VSW+++I YA N A+E F
Sbjct: 328 QRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFED 387
Query: 154 MVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRC 213
M+ + DS P+ VTM+SV + +I + + +LI MY R
Sbjct: 388 MI-DYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARG 446
Query: 214 GEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVL 273
G + +RVFD++K DVVS+N+L + + NG G + + + M +G+ P +++ +VL
Sbjct: 447 GNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVL 506
Query: 274 CACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLL 312
AC+ AGL++EG+ +F+S+ +P +HYACM DLL
Sbjct: 507 TACNRAGLLKEGQRIFKSIR-----NPLADHYACM-DLL 539
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 159/404 (39%), Gaps = 89/404 (22%)
Query: 11 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKAC-- 68
R +FD +++ N+ F+ + + ++L LY Q + GI D F++ V+K+
Sbjct: 59 TRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGR 118
Query: 69 ---------------------------------VVSEFSVY-PLQKGKEIHANILRHGY- 93
V S V+ + + K N++ GY
Sbjct: 119 FGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYW 178
Query: 94 ----------------EENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGC 137
E ++ T ++ +AK + A F MP K+ VSW+AM+
Sbjct: 179 KWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSG 238
Query: 138 YAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFI------ 191
YA+N AL LF+ M+ PN T V V + I
Sbjct: 239 YAQNGFTEDALRLFNDMLRLGVR--PNETTWVIVISACSFRADPSLTRSLVKLIDEKRVR 296
Query: 192 ---------------------LRR-----GLDSIMPVINALITMYGRCGEISIGERVFDK 225
RR G + NA+I+ Y R G++S ++FD
Sbjct: 297 LNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDT 356
Query: 226 VKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVS-PSYISFITVLCACSHAGLVEE 284
+ +VVSWNSLI+ Y +NG AI+ FE+MI G S P ++ I+VL AC H +E
Sbjct: 357 MPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLEL 416
Query: 285 GKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 328
G + + + K +I Y ++ + R L EA ++ ++M
Sbjct: 417 GDCIVD-YIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEM 459
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY G+L A++VFDE +ER + +N F A A G G E L L +M GI DR T
Sbjct: 442 MYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVT 501
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANI 88
YT VL AC + L++G+ I +I
Sbjct: 502 YTSVLTACNRAGL----LKEGQRIFKSI 525
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/291 (18%), Positives = 114/291 (39%), Gaps = 23/291 (7%)
Query: 115 YANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXX 174
Y +F ++ N ++M ++K DM L L+ Q C +P++ + V
Sbjct: 58 YTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQR--SRCGIMPDAFSFPVVIKS 115
Query: 175 XXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSW 234
+ + G V N ++ MY + + +VFD++ W
Sbjct: 116 AGRFGIL-----FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDW 170
Query: 235 NSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLS 294
N +IS Y G ++A ++F+ M V +S+ ++ + +E + F+ M
Sbjct: 171 NVMISGYWKWGNKEEACKLFDMMPENDV----VSWTVMITGFAKVKDLENARKYFDRMPE 226
Query: 295 KYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM---PFEPGPTVWGSLLGSCRIHCNAE 351
K + + M+ + ++A++L DM P T W ++ +C +
Sbjct: 227 K-----SVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPS 281
Query: 352 LAERASAMLFELE-PWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQK 401
L ++ E N L D++A+ + D++S R++ + Q+
Sbjct: 282 LTRSLVKLIDEKRVRLNCFVKTALLDMHAKCR---DIQSARRIFNELGTQR 329
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/479 (24%), Positives = 213/479 (44%), Gaps = 65/479 (13%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y SL+ A KVFDE + + WN+ GR +E + L+ +++ S + + F++
Sbjct: 100 YKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSF 159
Query: 62 TYVLKAC-----------VVSEFSVYPLQKGKEIHAN-----------------ILRHGY 93
T L AC + S+ L+KG + N + +H
Sbjct: 160 TAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHME 219
Query: 94 EEN-----------------------IHVMTT--------LLDVYAKFGCISYANSVFRA 122
E++ H M L+D + K G + A V
Sbjct: 220 EKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSD 279
Query: 123 MPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXX 182
MP NS SW+ ++ Y ++ +A E F +M S+++V
Sbjct: 280 MPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWG 339
Query: 183 XXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYG 242
+H + GLDS + V +ALI MY +CG + E +F + +++ WN +IS Y
Sbjct: 340 SL--IHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYA 397
Query: 243 NNGYGKKAIQIFENMIHQG-VSPSYISFITVLCACSHAGLVEEGKI-LFESMLSKYRIHP 300
NG +AI++F + + + P +F+ +L CSH + E + FE M+++YRI P
Sbjct: 398 RNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKP 457
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
+EH ++ +G+ + +A ++I++ F W +LLG+C + + A+ +A +
Sbjct: 458 SVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKM 517
Query: 361 FELEPWNAGN--YVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSF 417
EL + Y++++++YA + W +V +RK+M + + K G SWI+ + K S+
Sbjct: 518 IELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWIDSRTKCSSY 576
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 108/261 (41%), Gaps = 44/261 (16%)
Query: 82 KEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKN 141
+++H + +HG+ N + +L+ Y + A+ VF MP + +SW++++ Y ++
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQS 134
Query: 142 DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMP 201
+ + LF + L D PN + + +H +++ GL+
Sbjct: 135 GRFQEGICLF--LELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNV 192
Query: 202 VI-NALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQ 260
V+ N LI MYG+CG + VF ++ D VSWN++++
Sbjct: 193 VVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVA--------------------- 231
Query: 261 GVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDE 320
+CS G +E G F M +P Y ++D ++ +
Sbjct: 232 --------------SCSRNGKLELGLWFFHQM-----PNPDTVTYNELIDAFVKSGDFNN 272
Query: 321 AIKLIEDMPFEPGPTVWGSLL 341
A +++ DMP P + W ++L
Sbjct: 273 AFQVLSDMP-NPNSSSWNTIL 292
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 84/168 (50%), Gaps = 3/168 (1%)
Query: 187 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 246
+HG++ + G S + N+L+ Y + +VFD++ +PDV+SWNSL+S Y +G
Sbjct: 77 LHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGR 136
Query: 247 GKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA 306
++ I +F + V P+ SF L AC+ L G + S L K + G
Sbjct: 137 FQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACI-HSKLVKLGLEKGNVVVG 195
Query: 307 -CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 353
C++D+ G+ +D+A+ + + M E W +++ SC + EL
Sbjct: 196 NCLIDMYGKCGFMDDAVLVFQHME-EKDTVSWNAIVASCSRNGKLELG 242
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 166/345 (48%), Gaps = 15/345 (4%)
Query: 197 DSIMPV----INALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQ 252
D I P+ + +I MY C VF+++ + +W ++I NG G++AI
Sbjct: 136 DCITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAID 195
Query: 253 IFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLL 312
+F I +G P F V AC G + EG + FESM Y + ME Y ++++L
Sbjct: 196 MFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEML 255
Query: 313 GRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYV 372
LDEA+ +E M EP +W +L+ C + EL +R + ++ +L+
Sbjct: 256 AACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKES 315
Query: 373 LLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNPQIEKLRA 432
+ A+A SD ++ KL R Q + + KK+++ F + D + + A
Sbjct: 316 NAGLVAAKA---SD-SAMEKLKELRYCQMIRD----DPKKRMHEFRAG--DTSHLGTVSA 365
Query: 433 LLIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLINTVKGETIRITK 492
L +M + G+ P T + ++E EKE LL S KLA A +IN+ + + +
Sbjct: 366 FR-SLKVQMLDIGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQ 424
Query: 493 NLRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
N+R C D H K IS R ++ RD ++H +++GVCSC +YW
Sbjct: 425 NMRTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 140/283 (49%), Gaps = 6/283 (2%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
MY + G + RKVFD R W + A A G GEE + L+R M + ++ T
Sbjct: 328 MYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLT 387
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
+L+AC SV L GKE+HA I+++ E+N+++ +TL+ +Y K G A +V
Sbjct: 388 VVSILRACG----SVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVL 443
Query: 121 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 180
+ +P+++ VSW+AMI + +AL+ +M+ E + PN T S
Sbjct: 444 QQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVE--PNPFTYSSALKACANSES 501
Query: 181 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 240
+H + S + V +ALI MY +CG +S RVFD + ++VSW ++I
Sbjct: 502 LLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMG 561
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVE 283
Y NG+ ++A+++ M +G F T+L C L E
Sbjct: 562 YARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIELDE 604
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 174/350 (49%), Gaps = 14/350 (4%)
Query: 2 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
Y + G L A + FD E+ + W A A + G G + + ++ M + FT
Sbjct: 228 YAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTV 287
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
+LKAC + L+ G+++H+ +++ + ++ V T+L+D+YAK G IS VF
Sbjct: 288 CSILKACSEEK----ALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFD 343
Query: 122 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
M +N+V+W+++I +A+ +A+ LF +++ I N++T+VS+
Sbjct: 344 GMSNRNTVTWTSIIAAHAREGFGEEAISLFR--IMKRRHLIANNLTVVSILRACGSVGAL 401
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY 241
+H I++ ++ + + + L+ +Y +CGE V ++ + DVVSW ++IS
Sbjct: 402 LLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGC 461
Query: 242 GNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPG 301
+ G+ +A+ + MI +GV P+ ++ + L AC+++ + G+ + S+ K
Sbjct: 462 SSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSI-HSIAKKNHALSN 520
Query: 302 MEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL------GSCR 345
+ + ++ + + + EA ++ + MP E W +++ G CR
Sbjct: 521 VFVGSALIHMYAKCGFVSEAFRVFDSMP-EKNLVSWKAMIMGYARNGFCR 569
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 167/345 (48%), Gaps = 18/345 (5%)
Query: 5 LGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT---- 60
LG L ARKVFD E+ W A G +E L+ GI RFT
Sbjct: 130 LGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGI---RFTNERM 186
Query: 61 YTYVLKACVV-SEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV 119
+ +L C +EF + G+++H N+++ G N+ V ++L+ YA+ G ++ A
Sbjct: 187 FVCLLNLCSRRAEFEL-----GRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRA 240
Query: 120 FRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX 179
F M K+ +SW+A+I ++ +KA+ +F M+ +PN T+ S+
Sbjct: 241 FDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWF--LPNEFTVCSILKACSEEK 298
Query: 180 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 239
VH +++R + + + V +L+ MY +CGEIS +VFD + N + V+W S+I+
Sbjct: 299 ALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIA 358
Query: 240 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 299
+ G+G++AI +F M + + + ++ +++L AC G + GK L ++ K I
Sbjct: 359 AHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQII-KNSIE 417
Query: 300 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSC 344
+ + +V L + +A +++ +P W +++ C
Sbjct: 418 KNVYIGSTLVWLYCKCGESRDAFNVLQQLP-SRDVVSWTAMISGC 461
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 131/279 (46%), Gaps = 7/279 (2%)
Query: 82 KEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKN 141
K IHA L+ ++ I+ L+ + G + YA VF +MP KN+V+W+AMI Y K
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 142 DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMP 201
+ +A LF V N V + VHG +++ G+ +++
Sbjct: 162 GLEDEAFALFEDYVKHGI-RFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLI- 219
Query: 202 VINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG 261
V ++L+ Y +CGE++ R FD ++ DV+SW ++IS G+G KAI +F M++
Sbjct: 220 VESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHW 279
Query: 262 VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEA 321
P+ + ++L ACS + G+ + S++ K I + ++D+ + + +
Sbjct: 280 FLPNEFTVCSILKACSEEKALRFGRQV-HSLVVKRMIKTDVFVGTSLMDMYAKCGEISDC 338
Query: 322 IKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 360
K+ + M W S++ + H E A ++
Sbjct: 339 RKVFDGMS-NRNTVTWTSIIAA---HAREGFGEEAISLF 373
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 76/104 (73%)
Query: 434 LIKLSTEMKEQGYAPQTNIVHYDLDEGEKERILLGHSEKLAVAFGLINTVKGETIRITKN 493
L L E+++ GY P+T V +D+DE KE+ L+ HSE+LA+AFG+INT G TIR+ KN
Sbjct: 136 LKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRVMKN 195
Query: 494 LRLCEDCHAFTKFISKFANREILVRDVNRFHCFRDGVCSCGEYW 537
LR+C DCH F K +S +REI+VRD RFH FRDG CSCG+YW
Sbjct: 196 LRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 153/347 (44%), Gaps = 19/347 (5%)
Query: 7 SLDCARKVFDETRERTIYIWNAFFRALAMVGRG-EELLELYRQMNWSGIPSDRFTYTYVL 65
+++ +K+ ++ + T+ +N +G ++ L +M GI D +TY ++
Sbjct: 227 AVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI 286
Query: 66 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP- 124
C Q+ ++ + G+ + LLDVY K A V M
Sbjct: 287 TCCKRGSLH----QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVL 342
Query: 125 ---AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
+ + V+++++I YA++ M +A+EL +QM + P+ T ++
Sbjct: 343 NGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTK--PDVFTYTTLLSGFERAGKV 400
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK----NPDVVSWNSL 237
+ + G + NA I MYG G+ + ++FD++ +PD+V+WN+L
Sbjct: 401 ESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTL 460
Query: 238 ISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYR 297
++++G NG + +F+ M G P +F T++ A S G E+ ++ ML
Sbjct: 461 LAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA-G 519
Query: 298 IHPGMEHYACMVDLLGRANRLDEAIKLI---EDMPFEPGPTVWGSLL 341
+ P + Y ++ L R +++ K++ ED +P + SLL
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/378 (20%), Positives = 142/378 (37%), Gaps = 60/378 (15%)
Query: 1 MYHELGSLDCARKVFDETR----ERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPS 56
MY G K+FDE I WN G E+ ++++M +G
Sbjct: 428 MYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 487
Query: 57 DRFTYTYVLKACVVSEFS-VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISY 115
+R T+ ++S +S ++ ++ +L G ++ T+L A+ G
Sbjct: 488 ERETFN-----TLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQ 542
Query: 116 ANSVFRAMP----AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEA------------- 158
+ V M N +++ +++ YA K + L H + E
Sbjct: 543 SEKVLAEMEDGRCKPNELTYCSLLHAYANG----KEIGLMHSLAEEVYSGVIEPRAVLLK 598
Query: 159 --------CDSIPNS----------------VTMVSVXXXXXXXXXXXXXXXVHGFILRR 194
CD +P + T+ S+ V ++ R
Sbjct: 599 TLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKER 658
Query: 195 GLDSIMPVINALITMYGRCGEISIGERVFDKVK----NPDVVSWNSLISMYGNNGYGKKA 250
G M N+L+ M+ R + E + ++ PD++S+N++I Y N + A
Sbjct: 659 GFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDA 718
Query: 251 IQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVD 310
+IF M + G+ P I++ T + + + + EE + M+ K+ P Y +VD
Sbjct: 719 SRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMI-KHGCRPNQNTYNSIVD 777
Query: 311 LLGRANRLDEAIKLIEDM 328
+ NR DEA +ED+
Sbjct: 778 GYCKLNRKDEAKLFVEDL 795
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 81/185 (43%), Gaps = 44/185 (23%)
Query: 202 VINALITMYGRCGEISIGERVFDKVKNP----DVVSWNSLISMYGNNGYGKKAIQIF--- 254
V+ +I+M G+ G +S +F+ ++ DV S+ SLIS + N+G ++A+ +F
Sbjct: 175 VVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKM 234
Query: 255 ---------------------------------ENMIHQGVSPSYISFITVLCACSHAGL 281
E M G++P ++ T++ C L
Sbjct: 235 EEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSL 294
Query: 282 VEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM---PFEPGPTVWG 338
+E +FE M + + + Y ++D+ G+++R EA+K++ +M F P +
Sbjct: 295 HQEAAQVFEEMKAAGFSYDKVT-YNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYN 353
Query: 339 SLLGS 343
SL+ +
Sbjct: 354 SLISA 358
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 138/329 (41%), Gaps = 18/329 (5%)
Query: 6 GSLDCARKVFDETRE----RTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
G LD +VFDE R+++ + A A GR E LEL +M I TY
Sbjct: 155 GLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTY 214
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
V+ AC L + A + G + +I TLL A G A VFR
Sbjct: 215 NTVINACARGGLDWEGLLG---LFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFR 271
Query: 122 AMPAKNSV----SWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXX 177
M V ++S ++ + K K +L +M + S+P+ + +
Sbjct: 272 TMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMA--SGGSLPDITSYNVLLEAYAK 329
Query: 178 XXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK----NPDVVS 233
V + G + L+ ++G+ G ++F ++K +PD +
Sbjct: 330 SGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAAT 389
Query: 234 WNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESML 293
+N LI ++G GY K+ + +F +M+ + + P ++ ++ AC GL E+ + + + M
Sbjct: 390 YNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMT 449
Query: 294 SKYRIHPGMEHYACMVDLLGRANRLDEAI 322
+ I P + Y +++ G+A +EA+
Sbjct: 450 AN-DIVPSSKAYTGVIEAFGQAALYEEAL 477
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 103/244 (42%), Gaps = 16/244 (6%)
Query: 96 NIHVMTTLLDVYAKFGCISYANSVFRAMP----AKNSVSWSAMIGCYAKNDMPVKALELF 151
N H+ T ++ + + G + VF MP +++ S++A+I Y +N +LEL
Sbjct: 140 NEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL 199
Query: 152 HQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYG 211
+M E P+ +T +V + G + I P I T+
Sbjct: 200 DRMKNEKIS--PSILTYNTV--INACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLS 255
Query: 212 RCGEISIG---ERVFDKVKN----PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSP 264
C +G E VF + + PD+ +++ L+ +G +K + M G P
Sbjct: 256 ACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLP 315
Query: 265 SYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKL 324
S+ +L A + +G ++E +F M + P Y+ +++L G++ R D+ +L
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQMQAA-GCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Query: 325 IEDM 328
+M
Sbjct: 375 FLEM 378
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 148/314 (47%), Gaps = 24/314 (7%)
Query: 41 ELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANIL-RHGYEENIHV 99
E+LE R NW + ++ + +++ + G E ++L + G N+
Sbjct: 131 EILEWLRYQNW-------WNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVIS 183
Query: 100 MTTLLDVYAKFGCISYANSVFRAM----PAKNSVSWSAMIGCYAKNDMPVKALELFHQMV 155
T L++ Y + G + A ++FR M P +++++ ++ + + D +A E+F ++
Sbjct: 184 YTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLL 243
Query: 156 LEACDSI-PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCG 214
E + P+ + V ++ +G+ N+L++
Sbjct: 244 DEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYK 303
Query: 215 EISIGERVFDKVK----NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFI 270
E+S +++D+++ PDVVS+ LI YG ++A+ +FE M+ GV P++ ++
Sbjct: 304 EVS---KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYN 360
Query: 271 TVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMP- 329
+L A + +G+VE+ K +F+SM + RI P + Y M+ A+ ++ A K + +
Sbjct: 361 ILLDAFAISGMVEQAKTVFKSM-RRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKV 419
Query: 330 --FEPGPTVWGSLL 341
FEP +G+L+
Sbjct: 420 DGFEPNIVTYGTLI 433
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 148/314 (47%), Gaps = 24/314 (7%)
Query: 41 ELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANIL-RHGYEENIHV 99
E+LE R NW + ++ + +++ + G E ++L + G N+
Sbjct: 124 EILEWLRYQNW-------WNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVIS 176
Query: 100 MTTLLDVYAKFGCISYANSVFRAM----PAKNSVSWSAMIGCYAKNDMPVKALELFHQMV 155
T L++ Y + G + A ++FR M P +++++ ++ + + D +A E+F ++
Sbjct: 177 YTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLL 236
Query: 156 LEACDSI-PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCG 214
E + P+ + V ++ +G+ N+L++
Sbjct: 237 DEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYK 296
Query: 215 EISIGERVFDKVK----NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFI 270
E+S +++D+++ PDVVS+ LI YG ++A+ +FE M+ GV P++ ++
Sbjct: 297 EVS---KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYN 353
Query: 271 TVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMP- 329
+L A + +G+VE+ K +F+SM + RI P + Y M+ A+ ++ A K + +
Sbjct: 354 ILLDAFAISGMVEQAKTVFKSM-RRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKV 412
Query: 330 --FEPGPTVWGSLL 341
FEP +G+L+
Sbjct: 413 DGFEPNIVTYGTLI 426
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 165/369 (44%), Gaps = 26/369 (7%)
Query: 7 SLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLK 66
+LD RK+ + + ++ ++ +L G + + L+++M GI S TY +++
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 67 A-CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA 125
C +++ G + +++ N+ LLDV+ K G + AN +++ M
Sbjct: 272 GLCKAGKWN-----DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 326
Query: 126 K----NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
+ N ++++ ++ Y + +A + MV C P+ VT S+
Sbjct: 327 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS--PDIVTFTSLIKGYCMVKRV 384
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSL 237
V I +RGL + + L+ + + G+I + E +F ++ + PDV+++ L
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444
Query: 238 ISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYR 297
+ +NG +KA++IFE++ + + + T++ G VE+ LF S+ K
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK-G 503
Query: 298 IHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFE---PGPTVWGSLLGSCRIHC-NAELA 353
+ P + Y M+ L + L EA L+ M + P + +L+ R H + +L
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI---RAHLRDGDLT 560
Query: 354 ERASAMLFE 362
ASA L E
Sbjct: 561 --ASAKLIE 567
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/315 (17%), Positives = 141/315 (44%), Gaps = 23/315 (7%)
Query: 26 WNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA---CVVSEFSVYPLQKGK 82
++ FF A+A + +L+ +Q+ +GI + +T ++ C + F+ L K
Sbjct: 91 FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGK-- 148
Query: 83 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK----NSVSWSAMIGCY 138
+++ GYE + TL+ G +S A + M + V++++++
Sbjct: 149 -----VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGI 203
Query: 139 AKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDS 198
++ AL+L +M E + + T ++ + + +G+ S
Sbjct: 204 CRSGDTSLALDLLRKM--EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 199 IMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLISMYGNNGYGKKAIQIF 254
+ N+L+ + G+ + G + + + P+V+++N L+ ++ G ++A +++
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 255 ENMIHQGVSPSYISFITVLCA-CSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 313
+ MI +G+SP+ I++ T++ C L E +L ++ + + P + + ++
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNML--DLMVRNKCSPDIVTFTSLIKGYC 379
Query: 314 RANRLDEAIKLIEDM 328
R+D+ +K+ ++
Sbjct: 380 MVKRVDDGMKVFRNI 394
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 130/315 (41%), Gaps = 14/315 (4%)
Query: 23 IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGK 82
+ ++NA + G+ + EL M G D ++ ++ A + S L
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNL--AV 282
Query: 83 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSV----SWSAMIGCY 138
E+ + G + TLL ++ + A VF M A +++AMI Y
Sbjct: 283 ELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVY 342
Query: 139 AKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDS 198
+ + +A LF M LE P++VT S+ V+ + + G
Sbjct: 343 GRCGLAAEAERLF--MELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGK 400
Query: 199 IMPVINALITMYGRCGEISIGERVFDKVK-----NPDVVSWNSLISMYGNNGYGKKAIQI 253
N +I MYG+ G++ + +++ +K NPD +++ LI G +A +
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAAL 460
Query: 254 FENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 313
M+ G+ P+ ++ ++C + AG EE + F ML + P Y+ M+D+L
Sbjct: 461 MSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCML-RSGTKPDNLAYSVMLDVLL 519
Query: 314 RANRLDEAIKLIEDM 328
R N +A L DM
Sbjct: 520 RGNETRKAWGLYRDM 534
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 117/284 (41%), Gaps = 46/284 (16%)
Query: 89 LRHGYEENIHVMTTLLDVYAKFGCISYANSVF-RAMP--AKNSVSWSAMIGCYAKNDMPV 145
LRH + N ++ +L V ++ S A +F RA P ++AM+G Y+++
Sbjct: 183 LRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFS 242
Query: 146 KALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRG---------- 195
KA EL M C +P+ ++ ++ V + R
Sbjct: 243 KAQELVDAMRQRGC--VPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITY 300
Query: 196 ------------LDSIMPVI---------------NALITMYGRCGEISIGERVFDKVK- 227
LD + V NA+I++YGRCG + ER+F +++
Sbjct: 301 NTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELEL 360
Query: 228 ---NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEE 284
PD V++NSL+ + +K ++++ M G +++ T++ G ++
Sbjct: 361 KGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDL 420
Query: 285 GKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 328
L++ M +P Y ++D LG+ANR EA L+ +M
Sbjct: 421 ALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEM 464
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/392 (19%), Positives = 155/392 (39%), Gaps = 39/392 (9%)
Query: 79 QKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAM----PAKNSVSWSAM 134
QK + + N+ + G ++ +L+ YA+ GC A ++F M P+ S + +
Sbjct: 769 QKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINIL 828
Query: 135 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 194
+ + + EL+ +V+E + ++ S+ V
Sbjct: 829 LHALCVDG---RLEELY--VVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSM 883
Query: 195 GLDSIMPVINALITMYG--------RCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 246
+P I M R EI + E K ++ WNS++ MY
Sbjct: 884 KAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFK-VELAIWNSMLKMYTAIED 942
Query: 247 GKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA 306
KK +Q+++ + G+ P ++ T++ EEG +L + M + P ++ Y
Sbjct: 943 YKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQM-RNLGLDPKLDTYK 1001
Query: 307 CMVDLLGRANRLDEAIKLIEDM---PFEPGPTVWGSLLGSCRIHCNAELAERASAMLFE- 362
++ G+ L++A +L E++ + + + +++ R + AE+ M+
Sbjct: 1002 SLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNA 1061
Query: 363 -LEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRV-LQKVPGCSWIEVKKKIYSFVSS 420
+EP A ++L+ + K + L V L +P S I+ +++ S
Sbjct: 1062 GIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVID------AYLRS 1115
Query: 421 EEDNPQIEKLRALLIKLSTEMKEQGYAPQTNI 452
++ N IE+L EMK++G P I
Sbjct: 1116 KDYNSGIERL--------LEMKKEGLEPDHRI 1139
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 15/209 (7%)
Query: 201 PVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLISMYGNNGYGKKAIQIFEN 256
P+ +I YG+ E V ++ PD+ +WNSL+S Y G ++A IF
Sbjct: 753 PMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNT 812
Query: 257 MIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRAN 316
M+ G SP+ S +L A G +EE ++ E L M+D RA
Sbjct: 813 MMRDGPSPTVESINILLHALCVDGRLEELYVVVEE-LQDMGFKISKSSILLMLDAFARAG 871
Query: 317 RLDEAIKLIEDMP---FEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVL 373
+ E K+ M + P ++ ++ + C + A M+ E+E A V
Sbjct: 872 NIFEVKKIYSSMKAAGYLPTIRLYRMMI---ELLCKGKRVRDAEIMVSEME--EANFKVE 926
Query: 374 LADIYAEAKMWSDVKSVRKLMGKRVLQKV 402
LA + KM++ ++ +K + +V Q++
Sbjct: 927 LAIWNSMLKMYTAIEDYKKTV--QVYQRI 953
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 22/274 (8%)
Query: 1 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELY------RQMNWSGI 54
M+ G LD R++FD R + W F +G E+ L+ Q I
Sbjct: 132 MHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKI 191
Query: 55 PSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGY--EENIHVMTTLLDVYAKFGC 112
PS + VLKAC + + + GK++HA + G+ EE+ ++ +L+ Y +F C
Sbjct: 192 PS--WILGCVLKACAM----IRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRC 245
Query: 113 ISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKAL-ELFHQMVLEACDSIPNSVTMVS- 170
+ AN V + N+V+W+A + ND E+ + I +V++ S
Sbjct: 246 LEDANLVLHQLSNANTVAWAAKV----TNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSN 301
Query: 171 -VXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNP 229
+ VH ++ G +S + LI MYG+ G++ E+VF K+
Sbjct: 302 VLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDE 361
Query: 230 DVVS-WNSLISMYGNNGYGKKAIQIFENMIHQGV 262
VS WN++++ Y NG +AI++ M G+
Sbjct: 362 TSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGI 395
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 174/389 (44%), Gaps = 27/389 (6%)
Query: 22 TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA-CVVSEFSVYPLQK 80
+I +N A+A + + E ++ L QM GI D +TY+ + C S+ S+
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSL----- 136
Query: 81 GKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP----AKNSVSWSAMIG 136
+ A +++ GYE +I +++LL+ Y IS A ++ M ++ +++ +I
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 137 CYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGL 196
++ +A+ L QMV C P+ VT +V + + + +
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQ--PDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 254
Query: 197 DSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLISMYGNNGYGKKAIQ 252
++ + + N +I + + +F ++ N PDV +++SLIS N G A +
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 253 IFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLL 312
+ +MI + ++P+ ++F ++ A G + E + L++ M+ K I P + Y+ +++
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI-KRSIDPDIFTYSSLINGF 373
Query: 313 GRANRLDEAIKLIEDMPFE---PGPTVWGSLLGSCRIHCNAELAERASAMLFELEP---- 365
+RLDEA + E M + P + +L+ + C A+ E + E+
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLI---KGFCKAKRVEEGMELFREMSQRGLV 430
Query: 366 WNAGNYVLLADIYAEAKMWSDVKSVRKLM 394
N Y L + +A+ + + V K M
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMVFKQM 459
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 139/324 (42%), Gaps = 18/324 (5%)
Query: 20 ERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA-CVVSEFSVYPL 78
E + I+N L ++ L L+ +M+ GI D FTY+ ++ C +S
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS---- 310
Query: 79 QKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK----NSVSWSAM 134
+ ++++ N+ + L+D + K G + A ++ M + + ++S++
Sbjct: 311 -DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 369
Query: 135 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 194
I + +D +A +F M+ + C PN VT ++ + + +R
Sbjct: 370 INGFCMHDRLDEAKHMFELMISKDC--FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQR 427
Query: 195 GLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLISMYGNNGYGKKA 250
GL LI + + + + VF ++ + P+++++N L+ NG KA
Sbjct: 428 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 487
Query: 251 IQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVD 310
+ +FE + + P ++ ++ AG VE+G LF + LS + P + Y M+
Sbjct: 488 MVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN-LSLKGVSPNVIAYNTMIS 546
Query: 311 LLGRANRLDEAIKLIEDMPFEPGP 334
R +EA L++ M E GP
Sbjct: 547 GFCRKGSKEEADSLLKKMK-EDGP 569
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 143/326 (43%), Gaps = 27/326 (8%)
Query: 22 TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEF-----SVY 76
T+ NA ++ +G EELL ++R+M +GI +TY +++ V + F V+
Sbjct: 186 TVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF 245
Query: 77 PLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK----NSVSWS 132
+ + I +I+ + T++ Y K G A R M + + +++
Sbjct: 246 EVMESGRIKPDIVTY---------NTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYM 296
Query: 133 AMI-GCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFI 191
MI CYA +D + L+ +M + P++ ++V V +
Sbjct: 297 TMIQACYADSDFG-SCVALYQEMDEKGIQVPPHAFSLV--IGGLCKEGKLNEGYTVFENM 353
Query: 192 LRRGLDSIMPVINALITMYGRCGE----ISIGERVFDKVKNPDVVSWNSLISMYGNNGYG 247
+R+G + + LI Y + G I + R+ D+ PDVV+++ +++ NG
Sbjct: 354 IRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRV 413
Query: 248 KKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC 307
++A+ F G++ + + + +++ AG V+E + LFE M K Y
Sbjct: 414 EEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY-CYNA 472
Query: 308 MVDLLGRANRLDEAIKLIEDMPFEPG 333
++D + ++DEAI L + M E G
Sbjct: 473 LIDAFTKHRKVDEAIALFKRMEEEEG 498
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 148/343 (43%), Gaps = 37/343 (10%)
Query: 26 WNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSE-----FSVYPLQK 80
+N A G E LE+ ++M +G+ D T+ VL A S + L K
Sbjct: 216 YNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMK 275
Query: 81 GKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNS------VSWSAM 134
G ++ + ++ +K G S A +F +M K + V+++++
Sbjct: 276 GAKVRPDTT---------TFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSI 326
Query: 135 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 194
+ Y+ +F MV E PN V+ ++ V G I +
Sbjct: 327 MHLYSVKGEIENCRAVFEAMVAEGLK--PNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 384
Query: 195 GLDSIMPVINALITMYGRCGEISIGERVF----DKVKNPDVVSWNSLISMYGNNGYGKKA 250
G+ + L+ YGR + + VF + + P+VV++N+LI YG+NG+ +A
Sbjct: 385 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEA 444
Query: 251 IQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYR---IHPGMEHYAC 307
++IF M G+ P+ +S T+L ACS + + K+ +++LS + I+ Y
Sbjct: 445 VEIFRQMEQDGIKPNVVSVCTLLAACSRS----KKKVNVDTVLSAAQSRGINLNTAAYNS 500
Query: 308 MVDLLGRANRLDEAIKLIEDMPFE--PGPTVWGSLL--GSCRI 346
+ A L++AI L + M + +V ++L GSCR+
Sbjct: 501 AIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM 543
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 148/357 (41%), Gaps = 25/357 (7%)
Query: 2 YHELGSLDCARKVFDETRER----TIYIWNAFFRALAMVGRG-EELLELYRQMNWSGIPS 56
Y G + A +F+ +E T+ +N +GR ++L + +M G+
Sbjct: 220 YSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKF 279
Query: 57 DRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYA 116
D FT + VL AC L++ KE A + GYE LL V+ K G + A
Sbjct: 280 DEFTCSTVLSACAREGL----LREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEA 335
Query: 117 NSVFRAM-----PAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 171
SV + M PA +SV+++ ++ Y + +A + M + +PN++T +V
Sbjct: 336 LSVLKEMEENSCPA-DSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGV--MPNAITYTTV 392
Query: 172 XXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN--- 228
+ + G NA++++ G+ + ++ +K+
Sbjct: 393 IDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGC 452
Query: 229 -PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKI 287
P+ +WN+++++ GN G K ++F M G P +F T++ A G +
Sbjct: 453 SPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASK 512
Query: 288 LFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMP---FEPGPTVWGSLL 341
++ M ++ + + Y +++ L R +I DM F+P T + +L
Sbjct: 513 MYGEM-TRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLML 568
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 8/148 (5%)
Query: 204 NALITMYGRCG----EISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIH 259
NAL+ ++G+ G +S+ + + + D V++N L++ Y G+ K+A + E M
Sbjct: 320 NALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTK 379
Query: 260 QGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLD 319
+GV P+ I++ TV+ A AG +E LF SM + P Y ++ LLG+ +R +
Sbjct: 380 KGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCV-PNTCTYNAVLSLLGKKSRSN 438
Query: 320 EAIKLIEDMPF---EPGPTVWGSLLGSC 344
E IK++ DM P W ++L C
Sbjct: 439 EMIKMLCDMKSNGCSPNRATWNTMLALC 466
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 116/292 (39%), Gaps = 15/292 (5%)
Query: 26 WNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIH 85
WN G + + ++R+M G DR T+ ++ A V +++
Sbjct: 459 WNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEV----DASKMY 514
Query: 86 ANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK----NSVSWSAMIGCYAKN 141
+ R G+ + LL+ A+ G +V M +K S+S M+ CYAK
Sbjct: 515 GEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKG 574
Query: 142 DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMP 201
+ +E + E P+ + + ++ + G M
Sbjct: 575 GNYL-GIERIENRIKEG-QIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMV 632
Query: 202 VINALITMYGRCGEISIGERVFDKVK----NPDVVSWNSLISMYGNNGYGKKAIQIFENM 257
+ N++++++ R E + + ++ +PD+V++NSL+ MY G KA +I + +
Sbjct: 633 IFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTL 692
Query: 258 IHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMV 309
+ P +S+ TV+ GL++E + M + I P + Y V
Sbjct: 693 EKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTER-GIRPCIFTYNTFV 743
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 45/224 (20%)
Query: 202 VINALITMYGRCGEISIGERVFDKVKNP----DVVSWNSLISMYGNNGYGKKAIQIFENM 257
VI + + GR + S+ ++ DK+ DV ++ +++ Y G +KAI +FE M
Sbjct: 177 VIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERM 236
Query: 258 IHQGVSPSYISF------------------------------------ITVLCACSHAGL 281
G SP+ +++ TVL AC+ GL
Sbjct: 237 KEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGL 296
Query: 282 VEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPT---VWG 338
+ E K F + L PG Y ++ + G+A EA+ ++++M P +
Sbjct: 297 LREAKEFF-AELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYN 355
Query: 339 SLLGS-CRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEA 381
L+ + R + E A M + NA Y + D Y +A
Sbjct: 356 ELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKA 399
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 171/395 (43%), Gaps = 24/395 (6%)
Query: 22 TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA-CVVSEFSVYPLQK 80
+I +N A+A + + E ++ L QM GI D +TY+ + C S+ S+
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSL----- 136
Query: 81 GKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP----AKNSVSWSAMIG 136
+ A +++ GYE +I +++LL+ Y IS A ++ M ++ +++ +I
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 137 CYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGL 196
++ +A+ L QMV C P+ VT +V + + +
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQ--PDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARI 254
Query: 197 DSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLISMYGNNGYGKKAIQ 252
+ + + N +I + + + +F +++ P+VV++NSLI+ N G A +
Sbjct: 255 KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASR 314
Query: 253 IFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLL 312
+ NM+ + ++P+ ++F ++ A G + E + L E M+ + I P Y +++
Sbjct: 315 LLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR-SIDPDTITYNLLINGF 373
Query: 313 GRANRLDEAIKLIEDMPFE---PGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWN-A 368
NRLDEA ++ + M + P + +L+ C + E + E+
Sbjct: 374 CMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLING---FCKCKRVEDGVELFREMSQRGLV 430
Query: 369 GNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVP 403
GN V I D S + + + V +VP
Sbjct: 431 GNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 148/343 (43%), Gaps = 37/343 (10%)
Query: 26 WNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSE-----FSVYPLQK 80
+N A G E LE+ ++M +G+ D T+ VL A S + L K
Sbjct: 84 YNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMK 143
Query: 81 GKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNS------VSWSAM 134
G ++ + ++ +K G S A +F +M K + V+++++
Sbjct: 144 GAKVRPDTT---------TFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSI 194
Query: 135 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 194
+ Y+ +F MV E PN V+ ++ V G I +
Sbjct: 195 MHLYSVKGEIENCRAVFEAMVAEGLK--PNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 252
Query: 195 GLDSIMPVINALITMYGRCGEISIGERVF----DKVKNPDVVSWNSLISMYGNNGYGKKA 250
G+ + L+ YGR + + VF + + P+VV++N+LI YG+NG+ +A
Sbjct: 253 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEA 312
Query: 251 IQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYR---IHPGMEHYAC 307
++IF M G+ P+ +S T+L ACS + + K+ +++LS + I+ Y
Sbjct: 313 VEIFRQMEQDGIKPNVVSVCTLLAACSRS----KKKVNVDTVLSAAQSRGINLNTAAYNS 368
Query: 308 MVDLLGRANRLDEAIKLIEDMPFE--PGPTVWGSLL--GSCRI 346
+ A L++AI L + M + +V ++L GSCR+
Sbjct: 369 AIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM 411
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 148/340 (43%), Gaps = 16/340 (4%)
Query: 4 ELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWS-GIPSDRFTYT 62
++G +D A+ +F + I I+N GR ++ + M S GI D TY
Sbjct: 334 KIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYN 393
Query: 63 YVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRA 122
++ L E+ ++ G + N++ T L+D + K G I A +V
Sbjct: 394 SLIYGYWKEGLVGLAL----EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNE 449
Query: 123 MPAK----NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
M A N+V ++ +I + K +A+E+F +M + C P+ T S+
Sbjct: 450 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCK--PDVYTFNSLISGLCEV 507
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKV---KNP-DVVSW 234
+ ++ G+ + N LI + R GEI ++ +++ +P D +++
Sbjct: 508 DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITY 567
Query: 235 NSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLS 294
NSLI G KA +FE M+ G +PS IS ++ +G+VEE + F+ +
Sbjct: 568 NSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEA-VEFQKEMV 626
Query: 295 KYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGP 334
P + + +++ L RA R+++ + + + E P
Sbjct: 627 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP 666
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 121/287 (42%), Gaps = 24/287 (8%)
Query: 2 YHELGSLDCARKVFDET-----RERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPS 56
+ +LG +D A V +E + T+ +N A R E +E++R+M G
Sbjct: 434 FCKLGKIDEAYNVLNEMSADGLKPNTVG-FNCLISAFCKEHRIPEAVEIFREMPRKGCKP 492
Query: 57 DRFTYTYVLKA-CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISY 115
D +T+ ++ C V E ++ + +++ G N TL++ + + G I
Sbjct: 493 DVYTFNSLISGLCEVDE-----IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE 547
Query: 116 ANS-----VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVS 170
A VF+ P + ++++++I + KA LF +M+ + P++++
Sbjct: 548 ARKLVNEMVFQGSPL-DEITYNSLIKGLCRAGEVDKARSLFEKMLRDG--HAPSNISCNI 604
Query: 171 VXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN-- 228
+ ++ RG + N+LI R G I G +F K++
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664
Query: 229 --PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVL 273
PD V++N+L+S G+ A + + I G P++ ++ +L
Sbjct: 665 IPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 168/384 (43%), Gaps = 35/384 (9%)
Query: 20 ERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA-CVVSEFSVYPL 78
E + I++ +L ++ L L+ +M+ GI D FTY+ ++ C +S
Sbjct: 237 EADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS---- 292
Query: 79 QKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK----NSVSWSAM 134
+ +++L N+ +L+D +AK G + A +F M + N V+++++
Sbjct: 293 -DASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 351
Query: 135 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 194
I + +D +A ++F MV + C +P+ VT ++ + + RR
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSKDC--LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409
Query: 195 GLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLISMYGNNGYGKKA 250
GL LI + + + + VF ++ + P+++++N+L+ NG +KA
Sbjct: 410 GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Query: 251 IQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVD 310
+ +FE + + P ++ + AG VE+G LF S LS + P + Y M+
Sbjct: 470 MVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS-LSLKGVKPDVIAYNTMIS 528
Query: 311 LLGRANRLDEA----IKLIEDMPFEPGPTVWGSLLGSCRIH-------CNAELAERASAM 359
+ +EA IK+ ED P P + +L+ R H +AEL + +
Sbjct: 529 GFCKKGLKEEAYTLFIKMKEDGPL-PDSGTYNTLI---RAHLRDGDKAASAELIKEMRSC 584
Query: 360 LFELEPWNAGNYVLLADIYAEAKM 383
F +A Y L+ D+ + ++
Sbjct: 585 RF---AGDASTYGLVTDMLHDGRL 605
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 119/250 (47%), Gaps = 13/250 (5%)
Query: 88 ILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK----NSVSWSAMIGCYAKNDM 143
++ GY+ + TTL+ + S A ++ M K + V++ A+I K
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 144 PVKALELFHQM---VLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIM 200
P AL L ++M +EA D + S + S+ + +R + +
Sbjct: 221 PDLALNLLNKMEKGKIEA-DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279
Query: 201 PVINALITMYGRCGEIS-IGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIH 259
+I+ L YGR + S + + ++ NP+VV++NSLI + G +A ++F+ MI
Sbjct: 280 SLISCLCN-YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 260 QGVSPSYISFITVLCA-CSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRL 318
+ + P+ +++ +++ C H L +E + +F M+SK + P + Y +++ +A ++
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRL-DEAQQIFTLMVSKDCL-PDVVTYNTLINGFCKAKKV 396
Query: 319 DEAIKLIEDM 328
+ ++L DM
Sbjct: 397 VDGMELFRDM 406
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 166/355 (46%), Gaps = 25/355 (7%)
Query: 8 LDCARKVFDE-TRER---TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTY 63
LD A +F E + R +I ++ A+A + + + ++ L QM GIP + +TY+
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 64 VLKA-CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYA----NS 118
++ C S+ + GK +++ GYE NI +++LL+ Y IS A +
Sbjct: 122 LINCFCRRSQLPLALAVLGK-----MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
Query: 119 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
+F N+V+++ +I ++ +A+ L +MV + C P+ VT V
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQ--PDLVTYGVVVNGLCKR 234
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSW 234
+ + + L+ + + N +I + + +F +++ P+VV++
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 235 NSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLS 294
+SLIS N G A ++ +MI + ++P +F ++ A G + E + L++ M+
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV- 353
Query: 295 KYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFE---PGPTVWGSLL-GSCR 345
K I P + Y+ +++ +RLDEA ++ E M + P + +L+ G C+
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 142/318 (44%), Gaps = 17/318 (5%)
Query: 20 ERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA-CVVSEFSVYPL 78
E + I+N L ++ L L+++M GI + TY+ ++ C +S
Sbjct: 253 EPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS---- 308
Query: 79 QKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNS----VSWSAM 134
+ ++++ ++ + L+D + K G + A ++ M ++ V++S++
Sbjct: 309 -DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Query: 135 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 194
I + +D +A ++F MV + C P+ VT ++ V + +R
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHC--FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425
Query: 195 GLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLISMYGNNGYGKKA 250
GL N LI + G+ + + +F ++ + P+++++N+L+ NG +KA
Sbjct: 426 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Query: 251 IQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVD 310
+ +FE + + P+ ++ ++ AG VE+G LF + LS + P + Y M+
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN-LSLKGVKPDVVAYNTMIS 544
Query: 311 LLGRANRLDEAIKLIEDM 328
R +EA L ++M
Sbjct: 545 GFCRKGSKEEADALFKEM 562
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/330 (18%), Positives = 137/330 (41%), Gaps = 19/330 (5%)
Query: 11 ARKVFDETRER----TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLK 66
A K+ DE R+R + +N + GR +E ++ M SG + T+ +L+
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 67 ACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA- 125
S S +++ A++LR G+ ++ L++ + G + A + MP
Sbjct: 318 ----SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 126 ---KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXX 182
NS+S++ ++ + K +A+E +MV C P+ VT ++
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC--YPDIVTYNTMLTALCKDGKVE 431
Query: 183 XXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK----NPDVVSWNSLI 238
+ + +G ++ N +I + G+ ++ D+++ PD ++++SL+
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491
Query: 239 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 298
G +AI+ F G+ P+ ++F +++ + + I F +
Sbjct: 492 GGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRA-IDFLVFMINRGC 550
Query: 299 HPGMEHYACMVDLLGRANRLDEAIKLIEDM 328
P Y +++ L EA++L+ ++
Sbjct: 551 KPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Query: 204 NALITMYGRCGEISIGERVFDKVK-NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGV 262
N +I+ Y + GEI+ V D++ +PDVV++N+++ ++G K+A+++ + M+ +
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC 235
Query: 263 SPSYISF-ITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEA 321
P I++ I + C +G+ K+L E + P + Y +V+ + + RLDEA
Sbjct: 236 YPDVITYTILIEATCRDSGVGHAMKLLDE--MRDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 322 IKLIEDMP 329
IK + DMP
Sbjct: 294 IKFLNDMP 301
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 22/282 (7%)
Query: 78 LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSV----SWSA 133
L++G + N++ HG +I TTL+ + + G A + + +V +++
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177
Query: 134 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR 193
MI Y K AL + +M + P+ VT ++ V +L+
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVS-----PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232
Query: 194 RGLDSIMPVINALITMYGRCGEISIGE--RVFDKVKN----PDVVSWNSLISMYGNNGYG 247
R D VI I + C + +G ++ D++++ PDVV++N L++ G
Sbjct: 233 R--DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 248 KKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC 307
+AI+ +M G P+ I+ +L + G + + L ML K P + +
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK-GFSPSVVTFNI 349
Query: 308 MVDLLGRANRLDEAIKLIEDMP---FEPGPTVWGSLL-GSCR 345
+++ L R L AI ++E MP +P + LL G C+
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 153/339 (45%), Gaps = 28/339 (8%)
Query: 5 LGSLDCARKVFDE--TRERTIYI--WNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
+G D A +F+E T T+ + +N + LA ++ ++++ +M +G + +T
Sbjct: 283 IGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYT 342
Query: 61 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 120
Y+ +L +V+E + L EI + G + + L+ +K G +S A+ +F
Sbjct: 343 YSLLLN-LLVAEGQLVRLDGVVEISKRYMTQG------IYSYLVRTLSKLGHVSEAHRLF 395
Query: 121 RAM---PAKNSV-SWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXX 176
M P K S+ +M+ ++A+E+ ++ + + +++ +V
Sbjct: 396 CDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGV--VTDTMMYNTVFSALG 453
Query: 177 XXXXXXXXXXVHGFILRRGLDSIMPVI---NALITMYGRCGEISIGERVFDKVK----NP 229
+H + D P I N LI +GR GE+ +F++++ P
Sbjct: 454 KLKQISH---IHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKP 510
Query: 230 DVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILF 289
D++S+NSLI+ G NG +A F+ M +G++P +++ T++ VE LF
Sbjct: 511 DIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLF 570
Query: 290 ESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 328
E ML K P + Y ++D L + R EA+ L M
Sbjct: 571 EEMLVK-GCQPNIVTYNILLDCLEKNGRTAEAVDLYSKM 608
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 120/272 (44%), Gaps = 18/272 (6%)
Query: 19 RERTIYIWNAFFRALAMVGRGEELLELYRQMNWS-GIPSDRFTYTYVLKACVVSEFSVYP 77
R T I++ R L+ +G E L+ M WS + +R +Y +L++ + ++
Sbjct: 368 RYMTQGIYSYLVRTLSKLGHVSEAHRLFCDM-WSFPVKGERDSYMSMLESLCGAGKTIEA 426
Query: 78 LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAM----PAKNSVSWSA 133
++ +IH G + + T+ K IS+ + +F M P+ + +++
Sbjct: 427 IEMLSKIH----EKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNI 482
Query: 134 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR 193
+I + + +A+ +F + LE D P+ ++ S+ +
Sbjct: 483 LIASFGRVGEVDEAINIFEE--LERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQE 540
Query: 194 RGLDSIMPVINALITMYGRCGEISIGERVFDKVK----NPDVVSWNSLISMYGNNGYGKK 249
+GL+ + + L+ +G+ + + +F+++ P++V++N L+ NG +
Sbjct: 541 KGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAE 600
Query: 250 AIQIFENMIHQGVSPSYISFITV--LCACSHA 279
A+ ++ M QG++P I++ + L + SH
Sbjct: 601 AVDLYSKMKQQGLTPDSITYTVLERLQSVSHG 632
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 143/316 (45%), Gaps = 17/316 (5%)
Query: 92 GYEENIHVMTTL---LDVYAKFGCIS-YANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKA 147
G++ + H TT+ L +FG I+ + + R N+V+++ +I Y + + +A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 148 LELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALI 207
+ +F+QM C+ P+ VT ++ ++ + GL + +I
Sbjct: 414 MNVFNQMQEAGCE--PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 208 TMYGRCGEISIGERVFDKVK----NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVS 263
G+ G + R+F ++ P++V++N +I+++ + A++++ +M + G
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 531
Query: 264 PSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIK 323
P +++ V+ H G +EE + +F M K + P Y +VDL G+A +D+A +
Sbjct: 532 PDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV-PDEPVYGLLVDLWGKAGNVDKAWQ 590
Query: 324 LIEDM---PFEPGPTVWGSLLGS-CRIHCNAELAERASAML-FELEPWNAGNYVLLADIY 378
+ M P SLL + R+H +E +ML L P + Y LL
Sbjct: 591 WYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHP-SLQTYTLLLSCC 649
Query: 379 AEAKMWSDVKSVRKLM 394
+A+ D+ +LM
Sbjct: 650 TDARSNFDMGFCGQLM 665
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 123/285 (43%), Gaps = 18/285 (6%)
Query: 36 VGRGEELLELYR---QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHG 92
+GR ++ E+ + +M G + TY ++ + + + L++ + + G
Sbjct: 369 LGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANY----LKEAMNVFNQMQEAG 424
Query: 93 YEENIHVMTTLLDVYAKFGCISYANSVFRAMP----AKNSVSWSAMIGCYAKNDMPVKAL 148
E + TL+D++AK G + A +++ M + ++ ++S +I C K A
Sbjct: 425 CEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAH 484
Query: 149 ELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALIT 208
LF +MV + C PN VT + ++ + G + ++
Sbjct: 485 RLFCEMVGQGC--TPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVME 542
Query: 209 MYGRCGEISIGERVFDKVKN----PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSP 264
+ G CG + E VF +++ PD + L+ ++G G KA Q ++ M+ G+ P
Sbjct: 543 VLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRP 602
Query: 265 SYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMV 309
+ + ++L + E L +SML+ +HP ++ Y ++
Sbjct: 603 NVPTCNSLLSTFLRVHRMSEAYNLLQSMLA-LGLHPSLQTYTLLL 646
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 138/310 (44%), Gaps = 25/310 (8%)
Query: 50 NWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAK 109
N S + D +++ ++K C ++K ++ + G+ N+ + TTL+D K
Sbjct: 155 NKSKVVLDVYSFGILIKGCC----EAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCK 210
Query: 110 FGCISYANSVFRAMP----AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNS 165
G I A +F M N +++ +I KN + + E++ +M + PN
Sbjct: 211 KGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGV--FPNL 268
Query: 166 VTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGE--RVF 223
T V V + RG+ + N LI G C E+ + E +V
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIG--GLCREMKLNEANKVV 326
Query: 224 DKVK----NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISF-ITVLCACSH 278
D++K NP+++++N+LI + G KA+ + ++ +G+SPS +++ I V C
Sbjct: 327 DQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRK 386
Query: 279 AGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKL---IEDMPFEPGPT 335
K++ E + + I P Y ++D R++ +++AI+L +E++ P
Sbjct: 387 GDTSGAAKMVKE--MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVH 444
Query: 336 VWGSLL-GSC 344
+ L+ G C
Sbjct: 445 TYSVLIHGFC 454
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 183/407 (44%), Gaps = 31/407 (7%)
Query: 8 LDCARKVF-DETRER---TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTY 63
LD A +F D + R +I ++ A+A + + + ++ L QM GI + +TY+
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 64 VLKA-CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRA 122
++ C S+ S+ + A +++ GYE +I + +LL+ + IS A S+
Sbjct: 122 LINCFCRRSQLSL-----ALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 123 MP----AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
M +S +++ +I +++ +A+ L +MV++ C P+ VT V
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQ--PDLVTYGIVVNGLCKR 234
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSW 234
+ + + ++ + + N +I ++ +F ++ N P+VV++
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 235 NSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLS 294
NSLI N G A ++ +MI + ++P+ ++F ++ A G + E + L++ M+
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI- 353
Query: 295 KYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFE---PGPTVWGSLLGSCRIHCNAE 351
K I P + Y+ +++ +RLDEA + E M + P + +L+ + C A+
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI---KGFCKAK 410
Query: 352 LAERASAMLFELEP----WNAGNYVLLADIYAEAKMWSDVKSVRKLM 394
+ + E+ N Y L + +A+ + + V K M
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM 457
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 138/324 (42%), Gaps = 18/324 (5%)
Query: 20 ERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA-CVVSEFSVYPL 78
E + I+N AL + L L+ +M+ GI + TY +++ C +S
Sbjct: 253 EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS---- 308
Query: 79 QKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK----NSVSWSAM 134
+ ++++ N+ + L+D + K G + A ++ M + + ++S++
Sbjct: 309 -DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367
Query: 135 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 194
I + +D +A +F M+ + C PN VT ++ + + +R
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDC--FPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR 425
Query: 195 GLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLISMYGNNGYGKKA 250
GL LI + + E + VF ++ + PD+++++ L+ NNG + A
Sbjct: 426 GLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA 485
Query: 251 IQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVD 310
+ +FE + + P ++ ++ AG VE+G LF S LS + P + Y M+
Sbjct: 486 LVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS-LSLKGVKPNVVTYTTMMS 544
Query: 311 LLGRANRLDEAIKLIEDMPFEPGP 334
R +EA L +M E GP
Sbjct: 545 GFCRKGLKEEADALFREMK-EEGP 567
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 148/342 (43%), Gaps = 18/342 (5%)
Query: 23 IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA-CVVSEFSVYPLQKG 81
I +NA +L R + + ++++ GI + TYT ++ C S +S
Sbjct: 190 IVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS-----DA 244
Query: 82 KEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA----KNSVSWSAMIGC 137
+ +++++ N+ + LLD + K G + A +F M + V++S++I
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 138 YAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD 197
+D +A ++F MV + C + + V+ ++ + + +RGL
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGC--LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 198 SIMPVINALITMYGRCGEISIGERVFDKVK----NPDVVSWNSLISMYGNNGYGKKAIQI 253
S N LI + + G++ + F ++ +PD+ ++N L+ +NG +KA+ I
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 254 FENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 313
FE+M + + +++ TV+ G VEE LF S LS + P + Y M+ L
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS-LSLKGLKPDIVTYTTMMSGLC 481
Query: 314 RANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAER 355
L E L M E G L I +AEL ++
Sbjct: 482 TKGLLHEVEALYTKMKQE-GLMKNDCTLSDGDITLSAELIKK 522
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 136/347 (39%), Gaps = 23/347 (6%)
Query: 11 ARKVFDETRERTIYIWNA-----FFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 65
A KVFD + N+ L VGR EE L QM G TYT ++
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308
Query: 66 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA 125
KA + K + ++ G + N+H T L+D + G I AN V R M
Sbjct: 309 KALCDRGL----IDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364
Query: 126 K----NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 181
+ ++++A+I Y K+ V A EL M AC PN T +
Sbjct: 365 DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACK--PNVRTFNELMEGLCRVGKP 422
Query: 182 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK----NPDVVSWNSL 237
+ +L GL + N LI R G ++ ++ + PD +++ ++
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI 482
Query: 238 ISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYR 297
I+ + G A M+ +G+S ++ T++ G + + E+++ K R
Sbjct: 483 INAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV-KMR 541
Query: 298 IHPGMEHYACMVDLLGRANRLDEAIKL---IEDMPFEPGPTVWGSLL 341
I ++D+L + ++ E + + I + P + +L+
Sbjct: 542 ILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLV 588
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 148/363 (40%), Gaps = 27/363 (7%)
Query: 15 FDETRE----RTIY-IWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACV 69
FDE RE R Y +++ +LA + G YR+M G Y ++ A
Sbjct: 147 FDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALC 206
Query: 70 VSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP----- 124
+ ++ + + + IL+ G+ + H+ T+LL + + + A VF M
Sbjct: 207 KNGYT----EAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTC 262
Query: 125 AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXX 184
A NSVS+S +I + +A L QM + C P++ T +
Sbjct: 263 APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ--PSTRTYTVLIKALCDRGLIDKA 320
Query: 185 XXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDK-VKN---PDVVSWNSLISM 240
+ ++ RG + LI R G+I V K VK+ P V+++N+LI+
Sbjct: 321 FNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALING 380
Query: 241 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 300
Y +G A ++ M + P+ +F ++ G + L + ML + P
Sbjct: 381 YCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN-GLSP 439
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDM---PFEPGPTVWGSLLGSCRIHCNAELAERAS 357
+ Y ++D L R ++ A KL+ M EP + +++ + C A+ AS
Sbjct: 440 DIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINA---FCKQGKADVAS 496
Query: 358 AML 360
A L
Sbjct: 497 AFL 499
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 166/397 (41%), Gaps = 64/397 (16%)
Query: 6 GSLDCARKVFDETR----ERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
GSLD A +F+E + I I+ R GR ++ +L R M I D +
Sbjct: 261 GSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAF 320
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
+ ++ C V E L++ +E+H +++ G + T+L+D + K + AN +
Sbjct: 321 SALID-CFVKE---GKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376
Query: 122 AMPAK----NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXX 177
M +K N +++ +I Y K ++ LELF +M L
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL--------------------- 415
Query: 178 XXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVS 233
RG+ + N LI + G++ + + +F ++ + PD+VS
Sbjct: 416 ----------------RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459
Query: 234 WNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESML 293
+ L+ +NG +KA++IFE + + + ++ +A V++ LF S+
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 519
Query: 294 SKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFE---PGPTVWGSLLGSCRIHCNA 350
K + P ++ Y M+ L + L EA L M + P + L+ R H
Sbjct: 520 LK-GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI---RAHLGE 575
Query: 351 ELAERASAMLFELE----PWNAGNYVLLADIYAEAKM 383
A +++ ++ E++ +A ++ D+ ++ ++
Sbjct: 576 GDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRL 612
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 125/305 (40%), Gaps = 42/305 (13%)
Query: 26 WNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIH 85
+ + + G+ +EL R+M I D Y+ ++ L +
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG----SLDNAFNLF 270
Query: 86 ANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK----NSVSWSAMIGCYAKN 141
+ G++ +I + TTL+ + G + R M + + V++SA+I C+ K
Sbjct: 271 NEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKE 330
Query: 142 DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMP 201
+A EL +M+ P++VT S+ + GF LD
Sbjct: 331 GKLREAEELHKEMIQRGIS--PDTVTYTSL---------------IDGFCKENQLDKANH 373
Query: 202 VINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG 261
+++ +++ CG P++ ++N LI+ Y +++F M +G
Sbjct: 374 MLDLMVS--KGCG--------------PNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 262 VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEA 321
V +++ T++ G +E K LF+ M+S+ R+ P + Y ++D L ++A
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR-RVRPDIVSYKILLDGLCDNGEPEKA 476
Query: 322 IKLIE 326
+++ E
Sbjct: 477 LEIFE 481
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 129/335 (38%), Gaps = 54/335 (16%)
Query: 1 MYHELGSLDCA---RKVFDETRE--RTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIP 55
MY + GSL+ A ++ DE ++ +Y++ R ++L LY ++ SGI
Sbjct: 602 MYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIH 661
Query: 56 SDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISY 115
++ Y V+ C PL + ++R+G+ N LLDVY K
Sbjct: 662 WNQEMYNCVINCCA----RALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKK 717
Query: 116 ANSVF---RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVX 172
N +F + + +S++ +I Y KN M +
Sbjct: 718 VNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFD--------------- 762
Query: 173 XXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEI----SIGERVFDKVKN 228
G + N L+ YG+ ++ SI +R+
Sbjct: 763 ----------------------GFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSG 800
Query: 229 PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKIL 288
PD ++N +I++YG G+ + + + + G+ P S+ T++ A G+VEE L
Sbjct: 801 PDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGL 860
Query: 289 FESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIK 323
+ M + I P Y +V L R + EAIK
Sbjct: 861 VKEMRGR-NIIPDKVTYTNLVTALRRNDEFLEAIK 894
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 127/290 (43%), Gaps = 17/290 (5%)
Query: 47 RQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDV 106
R+M SGI D +TY ++K ++ + G ++ + G N V TLL
Sbjct: 171 RKMMASGIHGDVYTYGILMKGLSLTN----RIGDGFKLLQIMKTSGVAPNAVVYNTLLHA 226
Query: 107 YAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDS---IP 163
K G + A S+ M N V+++ +I Y ++++ L LE C S +P
Sbjct: 227 LCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVL-----LEKCFSLGFVP 281
Query: 164 NSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVF 223
+ VT+ V V + +G + N L+ Y G++ + +R F
Sbjct: 282 DVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFF 341
Query: 224 DKVKN----PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHA 279
+++ P+V ++N LI+ Y + G A+ F +M + ++ +F T++ S
Sbjct: 342 IEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIG 401
Query: 280 GLVEEGKILFESMLSKYRIHPG-MEHYACMVDLLGRANRLDEAIKLIEDM 328
G ++G + E M +H ++ Y C++ + NR ++A++ + M
Sbjct: 402 GRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKM 451
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 140/316 (44%), Gaps = 17/316 (5%)
Query: 92 GYEENIHVMTTL---LDVYAKFGCIS-YANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKA 147
G++ + H TT+ L +FG I+ + + R N+V+++ +I Y + + +A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 148 LELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALI 207
+ +F+QM C P+ VT ++ ++ + GL + +I
Sbjct: 419 MNVFNQMQEAGCK--PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 208 TMYGRCGEISIGERVF----DKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVS 263
G+ G + ++F D+ P++V++N ++ ++ + A++++ +M + G
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 264 PSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIK 323
P +++ V+ H G +EE + +F M K I P Y +VDL G+A +++A +
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 324 LIEDM---PFEPGPTVWGSLLGS-CRIHCNAELAERASAML-FELEPWNAGNYVLLADIY 378
+ M P SLL + R++ AE E ML L P + Y LL
Sbjct: 596 WYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP-SLQTYTLLLSCC 654
Query: 379 AEAKMWSDVKSVRKLM 394
+ + D+ +LM
Sbjct: 655 TDGRSKLDMGFCGQLM 670
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 140/316 (44%), Gaps = 17/316 (5%)
Query: 92 GYEENIHVMTTL---LDVYAKFGCIS-YANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKA 147
G++ + H TT+ L +FG I+ + + R N+V+++ +I Y + + +A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 148 LELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALI 207
+ +F+QM C P+ VT ++ ++ + GL + +I
Sbjct: 419 MNVFNQMQEAGCK--PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 208 TMYGRCGEISIGERVF----DKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVS 263
G+ G + ++F D+ P++V++N ++ ++ + A++++ +M + G
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 264 PSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIK 323
P +++ V+ H G +EE + +F M K I P Y +VDL G+A +++A +
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 324 LIEDM---PFEPGPTVWGSLLGS-CRIHCNAELAERASAML-FELEPWNAGNYVLLADIY 378
+ M P SLL + R++ AE E ML L P + Y LL
Sbjct: 596 WYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP-SLQTYTLLLSCC 654
Query: 379 AEAKMWSDVKSVRKLM 394
+ + D+ +LM
Sbjct: 655 TDGRSKLDMGFCGQLM 670
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 143/341 (41%), Gaps = 24/341 (7%)
Query: 6 GSLDCARKVFDETRE----RTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
G + A+++F+ T+Y ++A A G EE + ++ M G+ + TY
Sbjct: 247 GKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTY 306
Query: 62 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 121
V+ AC + K + R+G + + +LL V ++ G A ++F
Sbjct: 307 NAVIDACGKGGMEFKQVAK---FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFD 363
Query: 122 AMPAK----NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXX 177
M + + S++ ++ K A E+ QM ++ +PN V+ +V
Sbjct: 364 EMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRI--MPNVVSYSTVIDGFAK 421
Query: 178 XXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK-------NPD 230
+ G + G+ N L+++Y + G E D ++ D
Sbjct: 422 AGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGR---SEEALDILREMASVGIKKD 478
Query: 231 VVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFE 290
VV++N+L+ YG G + ++F M + V P+ +++ T++ S GL +E +F
Sbjct: 479 VVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFR 538
Query: 291 SMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFE 331
S + + Y+ ++D L + + A+ LI++M E
Sbjct: 539 EFKSA-GLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE 578
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 41/168 (24%)
Query: 202 VINALITMYGRCGEISIGERVFDKV----KNPDVVSWNSLISMYGNNGYGKKAIQI---- 253
+ +A+I+ GR G+++I +R+F+ V ++++LIS YG +G ++AI +
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 254 --------------------------------FENMIHQGVSPSYISFITVLCACSHAGL 281
F+ M GV P I+F ++L CS GL
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 282 VEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMP 329
E + LF+ M ++ RI + Y ++D + + ++D A +++ MP
Sbjct: 355 WEAARNLFDEMTNR-RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMP 401
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 141/336 (41%), Gaps = 66/336 (19%)
Query: 2 YHELGSLDCARKVFDETRE----RTIYIWNAFFRALAMVG-RGEELLELYRQMNWSGIPS 56
Y G + A VF+ +E + +NA A G +++ + + +M +G+
Sbjct: 278 YGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQP 337
Query: 57 DRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYA 116
DR T+ +L C S ++ + + + + E+++ TLLD K G + A
Sbjct: 338 DRITFNSLLAVC--SRGGLW--EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 393
Query: 117 NSVFRAMPAK----NSVSWSAMIGCYAKNDMPVKALELFHQM--VLEACDSIPNSVTMVS 170
+ MP K N VS+S +I +AK +AL LF +M + A D + + T++S
Sbjct: 394 FEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYN-TLLS 452
Query: 171 VXXXXXXXXXXXXXXXVHGFILRR----GLDSIMPVINALITMYGRCGEISIGERVFDKV 226
+ ILR G+ + NAL+ YG+ G+ ++VF ++
Sbjct: 453 IYTKVGRSEEALD-------ILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 227 KN----PDVVSWNSLISMYGNNGYGKKAIQIF---------------------------- 254
K P+++++++LI Y G K+A++IF
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV 565
Query: 255 -------ENMIHQGVSPSYISFITVLCACSHAGLVE 283
+ M +G+SP+ +++ +++ A + ++
Sbjct: 566 GSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMD 601
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 140/316 (44%), Gaps = 17/316 (5%)
Query: 92 GYEENIHVMTTL---LDVYAKFGCIS-YANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKA 147
G++ + H TT+ L +FG I+ + + R N+V+++ +I Y + + +A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 148 LELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALI 207
+ +F+QM C P+ VT ++ ++ + GL + +I
Sbjct: 419 MNVFNQMQEAGCK--PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 208 TMYGRCGEISIGERVF----DKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVS 263
G+ G + ++F D+ P++V++N ++ ++ + A++++ +M + G
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 264 PSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIK 323
P +++ V+ H G +EE + +F M K I P Y +VDL G+A +++A +
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 324 LIEDM---PFEPGPTVWGSLLGS-CRIHCNAELAERASAML-FELEPWNAGNYVLLADIY 378
+ M P SLL + R++ AE E ML L P + Y LL
Sbjct: 596 WYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP-SLQTYTLLLSCC 654
Query: 379 AEAKMWSDVKSVRKLM 394
+ + D+ +LM
Sbjct: 655 TDGRSKLDMGFCGQLM 670
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 154/352 (43%), Gaps = 63/352 (17%)
Query: 7 SLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLK 66
+LD RK+ + + ++ ++ +L G ++ L L+ +M GI +D TY+ ++
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 67 ACVVSEFSVYPLQKGK-EIHANILRHGYEENI----HVMTTLLDVYAKFGCISYANSVFR 121
GK + A +LR NI + L+DV+ K G + A ++
Sbjct: 289 GLC---------NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339
Query: 122 AM----PAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXX 177
M A ++++++++I + K + +A ++F MV + C+ P+ VT
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE--PDIVTY--------- 388
Query: 178 XXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVS 233
+ LI Y + + G R+F ++ + P+ ++
Sbjct: 389 --------------------------SILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 422
Query: 234 WNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESML 293
+N+L+ + +G A ++F+ M+ +GV PS +++ +L G + + +FE M
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM- 481
Query: 294 SKYRIHPGMEHYACMVDLLGRANRLDEAIKL---IEDMPFEPGPTVWGSLLG 342
K R+ G+ Y ++ + A+++D+A L + D +P + ++G
Sbjct: 482 QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIG 533
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 67/121 (55%), Gaps = 5/121 (4%)
Query: 229 PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKIL 288
PDVV++++LI ++ G +A +++ MI +G++P I++ +++ + E +
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 289 FESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFE---PGPTVWGSL-LGSC 344
F+ M+SK P + Y+ +++ +A R+D+ ++L ++ + P + +L LG C
Sbjct: 373 FDLMVSK-GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 431
Query: 345 R 345
+
Sbjct: 432 Q 432
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 145/340 (42%), Gaps = 22/340 (6%)
Query: 2 YHELGSLDCARKVFDETR----ERTIYIWNAFFRALAMVGRGEELLELYRQM-NWSGIPS 56
Y + LD A KVF+E R + L + R +E ++L+ +M + P+
Sbjct: 263 YCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPT 322
Query: 57 DRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYA 116
R TYT ++K+ SE L KE+ G + NIH T L+D A
Sbjct: 323 VR-TYTVLIKSLCGSERKSEALNLVKEMEET----GIKPNIHTYTVLIDSLCSQCKFEKA 377
Query: 117 NSVFRAMPAK----NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVX 172
+ M K N ++++A+I Y K M A+++ M E+ PN+ T +
Sbjct: 378 RELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM--ESRKLSPNTRTYNELI 435
Query: 173 XXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVF----DKVKN 228
++ + R+ L ++ N+LI R G R+ D+
Sbjct: 436 KGYCKSNVHKAMGVLNKMLERKVLPDVV-TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 229 PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKIL 288
PD ++ S+I + ++A +F+++ +GV+P+ + + ++ AG V+E ++
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 289 FESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 328
E MLSK + P + ++ L +L EA L E M
Sbjct: 555 LEKMLSKNCL-PNSLTFNALIHGLCADGKLKEATLLEEKM 593
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 149/369 (40%), Gaps = 51/369 (13%)
Query: 5 LGSLDCARKVFDETRER----TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 60
G +D ++V+ E E IY +N +G EE + ++ +G+ D FT
Sbjct: 196 FGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFT 255
Query: 61 YT-----YVLKACVVSEFSVY---PLQ--KGKEIHANILRHGY------EENIHVMTTLL 104
YT Y + + S F V+ PL+ + E+ L HG +E + + +
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMK 315
Query: 105 D-----------VYAKFGC----ISYANSVFRAMP----AKNSVSWSAMIGCYAKNDMPV 145
D V K C S A ++ + M N +++ +I
Sbjct: 316 DDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFE 375
Query: 146 KALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINA 205
KA EL QM+ + +PN +T ++ V + R L N
Sbjct: 376 KARELLGQMLEKGL--MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNE 433
Query: 206 LITMYGRCG---EISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGV 262
LI Y + + + ++ ++ PDVV++NSLI +G A ++ M +G+
Sbjct: 434 LIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493
Query: 263 SP---SYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLD 319
P +Y S I LC VEE LF+S+ K ++P + Y ++D +A ++D
Sbjct: 494 VPDQWTYTSMIDSLCKSKR---VEEACDLFDSLEQK-GVNPNVVMYTALIDGYCKAGKVD 549
Query: 320 EAIKLIEDM 328
EA ++E M
Sbjct: 550 EAHLMLEKM 558
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 119/279 (42%), Gaps = 15/279 (5%)
Query: 23 IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGK 82
+ + AL G E + M GI + TY + + V+ L
Sbjct: 363 VVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTL----ICGLLRVHRLDDAL 418
Query: 83 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK----NSVSWSAMIGCY 138
E+ N+ G + + +D Y K G A F M K N V+ +A +
Sbjct: 419 ELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSL 478
Query: 139 AKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDS 198
AK +A ++F+ L+ +P+SVT + + ++ G +
Sbjct: 479 AKAGRDREAKQIFYG--LKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEP 536
Query: 199 IMPVINALITMYGRCGEISIGERVFDKVK----NPDVVSWNSLISMYGNNGYGKKAIQIF 254
+ V+N+LI + + ++F ++K P VV++N+L++ G NG ++AI++F
Sbjct: 537 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 596
Query: 255 ENMIHQGVSPSYISFITVL-CACSHAGLVEEGKILFESM 292
E M+ +G P+ I+F T+ C C + + K+LF+ M
Sbjct: 597 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 635
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 138/364 (37%), Gaps = 43/364 (11%)
Query: 8 LDCARKVFDETRER----TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY-- 61
+D A K+F +E T+ +N L G+ +E +EL+ M G P + T+
Sbjct: 554 VDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNT 613
Query: 62 -----------TYVLK--------ACVVSEFS----VYPLQKGKEI-HANILRHGYEENI 97
T LK CV F+ ++ L K ++ A H ++ +
Sbjct: 614 LFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLV 673
Query: 98 H----VMTTLLDVYAKFGCISYA-----NSVFRAMPAKNSVSWSAMIGCYAKNDMPVKAL 148
+ + TLL K I A N ++ ++ W +IG A+
Sbjct: 674 YPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAV 733
Query: 149 ELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALIT 208
++V +S+ + + F G+ +P N LI
Sbjct: 734 SFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIG 793
Query: 209 MYGRCGEISIGERVFDKVKN----PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSP 264
I I + VF +VK+ PDV ++N L+ YG +G + ++++ M
Sbjct: 794 GLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEA 853
Query: 265 SYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKL 324
+ I+ V+ AG V++ L+ ++S P Y ++D L ++ RL EA +L
Sbjct: 854 NTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQL 913
Query: 325 IEDM 328
E M
Sbjct: 914 FEGM 917
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 135/338 (39%), Gaps = 29/338 (8%)
Query: 8 LDCARKVFDETR------ERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 61
LDCA++VF++ + +R YI + + + + + +M G D T+
Sbjct: 309 LDCAKEVFEKMKTGRHKPDRVTYI--TLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTF 366
Query: 62 TYVLKA-CVVSEFSVYPLQKGKEIHA-NILR-HGYEENIHVMTTLLDVYAKFGCISYANS 118
T ++ A C F G+ +++R G N+H TL+ + + A
Sbjct: 367 TILVDALCKAGNF-------GEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 419
Query: 119 VFRAMPA----KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXX 174
+F M + + ++ I Y K+ V ALE F +M + PN V +
Sbjct: 420 LFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI--APNIVACNASLYS 477
Query: 175 XXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PD 230
+ + GL N ++ Y + GEI ++ ++ PD
Sbjct: 478 LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537
Query: 231 VVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFE 290
V+ NSLI+ +A ++F M + P+ +++ T+L G ++E LFE
Sbjct: 538 VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFE 597
Query: 291 SMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 328
M+ K P + + D L + + + A+K++ M
Sbjct: 598 GMVQK-GCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/275 (18%), Positives = 113/275 (41%), Gaps = 12/275 (4%)
Query: 78 LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA----KNSVSWSA 133
++ +++ + G ++ LLD Y K G I +++ M N+++ +
Sbjct: 801 IEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNI 860
Query: 134 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR 193
+I K AL+L++ ++ + D P + T + + +L
Sbjct: 861 VISGLVKAGNVDDALDLYYDLMSDR-DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLD 919
Query: 194 RGLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLISMYGNNGYGKK 249
G + N LI +G+ GE +F ++ PD+ +++ L+ G +
Sbjct: 920 YGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDE 979
Query: 250 AIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMV 309
+ F+ + G++P + + ++ + +EE +LF M + I P + Y ++
Sbjct: 980 GLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI 1039
Query: 310 DLLGRANRLDEAIKL---IEDMPFEPGPTVWGSLL 341
LG A ++EA K+ I+ EP + +L+
Sbjct: 1040 LNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1074
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 134/321 (41%), Gaps = 46/321 (14%)
Query: 20 ERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA-CVVSEFSVYPL 78
E + I+N L ++ +L+ +M GI D FTY ++ C +S
Sbjct: 247 EADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWS---- 302
Query: 79 QKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK-----NSVSWSA 133
+ +++L ++ L+D + K G + A ++ M + V+++
Sbjct: 303 -DASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNT 361
Query: 134 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR 193
+I + K + +E+F +M + N+VT ++ +HGF
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGL--VGNTVTYTTL---------------IHGFFQA 404
Query: 194 RGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQI 253
R D+ V +++ D V +PD++++N L+ NNG + A+ +
Sbjct: 405 RDCDNAQMVFKQMVS---------------DGV-HPDIMTYNILLDGLCNNGNVETALVV 448
Query: 254 FENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 313
FE M + + +++ T++ A AG VE+G LF S LS + P + Y M+
Sbjct: 449 FEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCS-LSLKGVKPNVVTYTTMMSGFC 507
Query: 314 RANRLDEAIKLIEDMPFEPGP 334
R +EA L +M E GP
Sbjct: 508 RKGLKEEADALFVEMK-EDGP 527
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/316 (19%), Positives = 146/316 (46%), Gaps = 16/316 (5%)
Query: 22 TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYT-YVLKACVVSEFSVYPLQK 80
+I ++ A+A + + + ++ L QM GI + +TY+ ++ C S+ S+
Sbjct: 74 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAIL 133
Query: 81 GKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP----AKNSVSWSAMIG 136
GK +++ GY +I + +LL+ + IS A ++ M ++V+++ ++
Sbjct: 134 GK-----MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH 188
Query: 137 CYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGL 196
+++ +A+ L +MV++ C P+ VT +V + + + +
Sbjct: 189 GLFQHNKASEAVALVERMVVKGCQ--PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKI 246
Query: 197 DSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLISMYGNNGYGKKAIQ 252
++ + + N +I + + +F+K++ PDV ++N LIS N G A +
Sbjct: 247 EADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASR 306
Query: 253 IFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLL 312
+ +M+ + ++P + F ++ A G + E + L++ M+ P + Y ++
Sbjct: 307 LLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGF 366
Query: 313 GRANRLDEAIKLIEDM 328
+ R++E +++ +M
Sbjct: 367 CKYKRVEEGMEVFREM 382
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/404 (20%), Positives = 158/404 (39%), Gaps = 102/404 (25%)
Query: 2 YHELGSLDCARKVFDETRER----TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSD 57
Y +LG D A ++FDE ++ T I+ VG+ E+ L+L+ +M +G
Sbjct: 243 YEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPT 302
Query: 58 RFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYAN 117
+TYT ++K + + + ++LR G ++ + L+++ K G +
Sbjct: 303 VYTYTELIKGL----GKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELT 358
Query: 118 SVF------RAMPA-----------------------------KNSVS-----WSAMIGC 137
+VF R P +SVS +S +I
Sbjct: 359 NVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDG 418
Query: 138 YAKNDMPVKALELFHQMVLEACDSIPNS-VTMVSVXXXXXXXXXXXXXXXVHGFILRRGL 196
Y K + KAL L +M + P + ++++ L+
Sbjct: 419 YCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKE----LKENF 474
Query: 197 DSIMPVINA-LITMYGRCGEISIGERVFDKVKN----PDVVSWNSLISM----------- 240
++ + A +I +G+CG++S +F+++KN PDV ++N+L+S
Sbjct: 475 GNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEAN 534
Query: 241 ------------------------YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCAC 276
+ G ++AI++FE + H G+ P +++ T+L
Sbjct: 535 SLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCF 594
Query: 277 SHAGLVEEGKILFESMLSKYRIHPGMEH----YACMVDLLGRAN 316
+HAG+ EE + M K G E+ Y+ ++D +G +
Sbjct: 595 AHAGMFEEAARMMREMKDK-----GFEYDAITYSSILDAVGNVD 633
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 12/204 (5%)
Query: 132 SAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFI 191
S ++ + M KAL +F+Q C P S T SV V+ +
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCK--PTSSTYNSVILMLMQEGQHEKVHEVYTEM 223
Query: 192 LRRG---LDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLISMYGNN 244
G D+I +ALI+ Y + G R+FD++K+ P + +L+ +Y
Sbjct: 224 CNEGDCFPDTI--TYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKV 281
Query: 245 GYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 304
G +KA+ +FE M G SP+ ++ ++ AG V+E ++ ML + + P +
Sbjct: 282 GKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDML-RDGLTPDVVF 340
Query: 305 YACMVDLLGRANRLDEAIKLIEDM 328
++++LG+ R++E + +M
Sbjct: 341 LNNLMNILGKVGRVEELTNVFSEM 364
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 112/252 (44%), Gaps = 15/252 (5%)
Query: 127 NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXX 186
+++++SA+I Y K A+ LF +M + C P ++
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMK-DNCMQ-PTEKIYTTLLGIYFKVGKVEKALD 289
Query: 187 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVF-DKVKN---PDVVSWNSLISMYG 242
+ + R G + LI G+ G + + D +++ PDVV N+L+++ G
Sbjct: 290 LFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILG 349
Query: 243 NNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHA-GLVEEGKILFESMLSKYRIHPG 301
G ++ +F M +P+ +S+ TV+ A + V E F+ M + + P
Sbjct: 350 KVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKAD-SVSPS 408
Query: 302 MEHYACMVDLLGRANRLDEAIKLIEDMP---FEPGPTVWGSLLGSCRIHCNAELAERASA 358
Y+ ++D + NR+++A+ L+E+M F P P + SL+ + A+ E A+
Sbjct: 409 EFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINAL---GKAKRYEAANE 465
Query: 359 MLFELEPWNAGN 370
+ EL+ N GN
Sbjct: 466 LFKELKE-NFGN 476
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 178/413 (43%), Gaps = 28/413 (6%)
Query: 8 LDCARKVFDETRER----TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTY 63
LD A +F E + +I +N A+A + + + ++ L +M I D ++Y
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 64 VLKA-CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYA----NS 118
++ C S+ + GK +++ GYE +I +++LL+ Y IS A +
Sbjct: 121 LINCFCRRSQLPLALAVLGK-----MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQ 175
Query: 119 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 178
+F N+V+++ +I ++ +A+ L +MV C P+ T +V
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQ--PDLFTYGTVVNGLCKR 233
Query: 179 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSW 234
+ + + +++ + + +I ++ +F ++ N P+VV++
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 235 NSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLS 294
NSLI N G A ++ +MI + ++P+ ++F ++ A G + E + L++ M+
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI- 352
Query: 295 KYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFE---PGPTVWGSLLGSCRIHCNAE 351
K I P + Y+ +++ +RLDEA + E M + P + +L+ + C A+
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI---KGFCKAK 409
Query: 352 LAERASAMLFELEPWN-AGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVP 403
E + E+ GN V + D +K+ K V VP
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 142/334 (42%), Gaps = 20/334 (5%)
Query: 20 ERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA-CVVSEFSVYPL 78
E + I+ AL + L L+ +M+ GI + TY +++ C +S
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS---- 307
Query: 79 QKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK----NSVSWSAM 134
+ ++++ N+ + L+D + K G + A ++ M + + ++S++
Sbjct: 308 -DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 135 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 194
I + +D +A +F M+ + C PN VT ++ + + +R
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDC--FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR 424
Query: 195 GLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLISMYGNNGYGKKA 250
GL N LI + G+ + +++F K+ + PD+++++ L+ G +KA
Sbjct: 425 GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 484
Query: 251 IQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVD 310
+ +FE + + P ++ ++ AG VE+G LF S LS + P + Y M+
Sbjct: 485 LVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS-LSLKGVKPNVIIYTTMIS 543
Query: 311 LLGRANRLDEAIKLIEDMPFE---PGPTVWGSLL 341
R +EA L +M + P + +L+
Sbjct: 544 GFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/361 (20%), Positives = 139/361 (38%), Gaps = 81/361 (22%)
Query: 11 ARKVFDETRERTI----YIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLK 66
A +F+E R+ I +NA + G ++ + +M G+ D TY+ ++
Sbjct: 323 AEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLID 382
Query: 67 A-----------CVVSEFSVYPLQKGKEIHANIL-----RHGYEENIHVM---------- 100
A V+ E +Q + + +L R +++ V+
Sbjct: 383 AYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKP 442
Query: 101 -----TTLLDVYAKFGCISYANSVFRAMPAK----NSVSWSAMIGCYAKNDMPVKALELF 151
++D + KF C+ +A + F M ++ + V+W+ +I C+ K+ + A E+F
Sbjct: 443 DRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMF 502
Query: 152 HQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYG 211
M C +P + T N +I YG
Sbjct: 503 EAMERRGC--LPCATT-----------------------------------YNIMINSYG 525
Query: 212 RCGEISIGERVFDKVKN----PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYI 267
+R+ K+K+ P+VV+ +L+ +YG +G AI+ E M G+ PS
Sbjct: 526 DQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSST 585
Query: 268 SFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIED 327
+ ++ A + GL E+ F M S + P + +++ G R EA +++
Sbjct: 586 MYNALINAYAQRGLSEQAVNAFRVMTSD-GLKPSLLALNSLINAFGEDRRDAEAFAVLQY 644
Query: 328 M 328
M
Sbjct: 645 M 645
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 138/336 (41%), Gaps = 56/336 (16%)
Query: 32 ALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRH 91
ALA GR E L+ ++ SGI Y +LK V + PL+ + + + + +
Sbjct: 313 ALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTG----PLKDAESMVSEMEKR 368
Query: 92 GYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA----KNSVSWSAMIGCYAKNDMPVKA 147
G + H + L+D Y G A V + M A NS +S ++ + K
Sbjct: 369 GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKT 428
Query: 148 LELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALI 207
++ +M SI G+ N +I
Sbjct: 429 FQVLKEM-----KSI--------------------------------GVKPDRQFYNVVI 451
Query: 208 TMYGRCGEISIGERVFDKVKN----PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVS 263
+G+ + FD++ + PD V+WN+LI + +G A ++FE M +G
Sbjct: 452 DTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCL 511
Query: 264 PSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIK 323
P ++ ++ + ++ K L M S+ I P + + +VD+ G++ R ++AI+
Sbjct: 512 PCATTYNIMINSYGDQERWDDMKRLLGKMKSQ-GILPNVVTHTTLVDVYGKSGRFNDAIE 570
Query: 324 LIEDMP---FEPGPTVWGSLLGSCRIHCNAELAERA 356
+E+M +P T++ +L+ + + L+E+A
Sbjct: 571 CLEEMKSVGLKPSSTMYNALINA---YAQRGLSEQA 603
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 145/346 (41%), Gaps = 18/346 (5%)
Query: 22 TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKG 81
+ I+N L LE++ M GI +D TY ++ S
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSG----RWTDA 238
Query: 82 KEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK----NSVSWSAMIGC 137
+ ++++ + N+ T L+D + K G + A ++++ M + N +++++I
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 138 YAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD 197
+ + A +F MV + C P+ VT ++ + + +GL
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGC--FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356
Query: 198 SIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLISMYGNNGYGKKAIQI 253
N LI Y + G++++ ++VF+++ + PD+V++N L+ NNG +KA+ +
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 416
Query: 254 FENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 313
E++ + I++ ++ ++E LF S L++ + P Y M+ L
Sbjct: 417 VEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRS-LTRKGVKPDAIAYITMISGLC 475
Query: 314 RANRLDEAIKLIEDMP---FEPGPTVWGSLLGSCRIHCNAELAERA 356
R EA KL M F P ++ L +AEL + A
Sbjct: 476 RKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAELIKAA 521
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/337 (19%), Positives = 137/337 (40%), Gaps = 21/337 (6%)
Query: 22 TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKG 81
+I + R +E + L M+ G + Y V+ + L
Sbjct: 148 SIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR----DLNNA 203
Query: 82 KEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK----NSVSWSAMIGC 137
E+ + + G + TL+ + G + A + R M + N + ++A+I
Sbjct: 204 LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 263
Query: 138 YAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD 197
+ K ++A L+ +M+ + +PN T S+ + ++ +G
Sbjct: 264 FVKEGNLLEARNLYKEMIRRSV--VPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF 321
Query: 198 SIMPVINALITMYGRCGEISIGERVFDKVKNP----DVVSWNSLISMYGNNGYGKKAIQI 253
+ N LIT + + + G ++F ++ D ++N+LI Y G A ++
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 254 FENMIHQGVSPSYISFITVL-CACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLL 312
F M+ GVSP +++ +L C C++ G +E+ ++ E L K + + Y ++ L
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNN-GKIEKALVMVED-LQKSEMDVDIITYNIIIQGL 439
Query: 313 GRANRLDEAIKLIEDMP---FEPGPTVWGSLL-GSCR 345
R ++L EA L + +P + +++ G CR
Sbjct: 440 CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 476
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 12/208 (5%)
Query: 129 VSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVH 188
+S++ +I CY + +K E+ +M EA S PNS+T ++ V
Sbjct: 260 ISYTTIIRCYCQQFEFIKVYEMLSEM--EANGSPPNSITYTTIMSSLNAQKEFEEALRVA 317
Query: 189 GFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDV------VSWNSLISMYG 242
+ R G N LI R G + ERVF +V+ P++ ++NS+I+MY
Sbjct: 318 TRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVF-RVEMPELGVSINTSTYNSMIAMYC 376
Query: 243 NNGYGKKAIQIFENMIHQGV-SPSYISFITVLCACSHAG-LVEEGKILFESMLSKYRIHP 300
++ KAI++ + M + +P ++ +L +C G +VE GK+L E M++K+ +
Sbjct: 377 HHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKE-MVTKHHLSL 435
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDM 328
Y ++ L RAN + A L E+M
Sbjct: 436 DESTYTFLIQRLCRANMCEWAYCLFEEM 463
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 12/208 (5%)
Query: 129 VSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVH 188
+S++ +I CY + +K E+ +M EA S PNS+T ++ V
Sbjct: 260 ISYTTIIRCYCQQFEFIKVYEMLSEM--EANGSPPNSITYTTIMSSLNAQKEFEEALRVA 317
Query: 189 GFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDV------VSWNSLISMYG 242
+ R G N LI R G + ERVF +V+ P++ ++NS+I+MY
Sbjct: 318 TRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVF-RVEMPELGVSINTSTYNSMIAMYC 376
Query: 243 NNGYGKKAIQIFENMIHQGV-SPSYISFITVLCACSHAG-LVEEGKILFESMLSKYRIHP 300
++ KAI++ + M + +P ++ +L +C G +VE GK+L E M++K+ +
Sbjct: 377 HHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKE-MVTKHHLSL 435
Query: 301 GMEHYACMVDLLGRANRLDEAIKLIEDM 328
Y ++ L RAN + A L E+M
Sbjct: 436 DESTYTFLIQRLCRANMCEWAYCLFEEM 463
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 143/316 (45%), Gaps = 17/316 (5%)
Query: 25 IWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEI 84
I+ +LA GR E LE+ +M GIP Y+ +++A + V + KE
Sbjct: 250 IYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEA 309
Query: 85 HANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAM-PAKNSVS---WSAMIGCYAK 140
L E + V+ +Y + G + V AM A+ V+ A++ ++K
Sbjct: 310 GGKKLLKDPEMCLKVVL----MYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSK 365
Query: 141 NDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIM 200
+A++++ + E C++ VT + ++++G D +
Sbjct: 366 QRGFAEAVKVYEWAMKEECEA--GQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCV 423
Query: 201 PVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLISMYGNNGYGKKAIQIFEN 256
+ ++ MYG+ +S R+ K+K P++ +NSLI M+G ++A +I++
Sbjct: 424 VAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKE 483
Query: 257 MIHQGVSPSYISFITVLCACSHAGLVEEGKILFESM-LSKYRIHPGMEHYACMVDLLGRA 315
M V P +S+ +++ A + + +E L++ +++ +I M MV + +
Sbjct: 484 MKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMA--GIMVGVFSKT 541
Query: 316 NRLDEAIKLIEDMPFE 331
+R+DE ++L++DM E
Sbjct: 542 SRIDELMRLLQDMKVE 557
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 140/324 (43%), Gaps = 18/324 (5%)
Query: 20 ERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA-CVVSEFSVYPL 78
E + I+N +L ++ L L+++M GI + TY+ ++ C +S
Sbjct: 257 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS---- 312
Query: 79 QKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK----NSVSWSAM 134
++ ++++ N+ L+D + K G A ++ M + + +++++
Sbjct: 313 -DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 371
Query: 135 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 194
+ + +D KA ++F MV + C P+ VT ++ + + R
Sbjct: 372 VNGFCMHDRLDKAKQMFEFMVSKDC--FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR 429
Query: 195 GLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLISMYGNNGYGKKA 250
GL LI G+ ++VF ++ + PD+++++ L+ NNG +KA
Sbjct: 430 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 489
Query: 251 IQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVD 310
+++F+ M + + T++ AG V++G LF S LS + P + Y M+
Sbjct: 490 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS-LSLKGVKPNVVTYNTMIS 548
Query: 311 LLGRANRLDEAIKLIEDMPFEPGP 334
L L EA L++ M E GP
Sbjct: 549 GLCSKRLLQEAYALLKKMK-EDGP 571
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/395 (20%), Positives = 173/395 (43%), Gaps = 24/395 (6%)
Query: 22 TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA-CVVSEFSVYPLQK 80
+I +N A+A + + + ++ L +M I +TY ++ C S+ S+
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 143
Query: 81 GKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA----KNSVSWSAMIG 136
GK +++ GYE +I +++LL+ Y IS A ++ M ++++++ +I
Sbjct: 144 GK-----MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198
Query: 137 CYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGL 196
++ +A+ L +MV C PN VT V + + +
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQ--PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKI 256
Query: 197 DSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLISMYGNNGYGKKAIQ 252
++ + + N +I + + +F +++ P+VV+++SLIS + G A Q
Sbjct: 257 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 316
Query: 253 IFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLL 312
+ +MI + ++P+ ++F ++ A G E + L++ M+ K I P + Y +V+
Sbjct: 317 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI-KRSIDPDIFTYNSLVNGF 375
Query: 313 GRANRLDEAIKLIEDMPFE---PGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWN-A 368
+RLD+A ++ E M + P + +L+ + C ++ E + + E+
Sbjct: 376 CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI---KGFCKSKRVEDGTELFREMSHRGLV 432
Query: 369 GNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVP 403
G+ V + D + +K+ + V VP
Sbjct: 433 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 467
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/370 (19%), Positives = 154/370 (41%), Gaps = 51/370 (13%)
Query: 2 YHELGSLDCARKVFDETR----ERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSD 57
+ ++G LD F+E + E + +NA G+ LE YR+M +G+ +
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366
Query: 58 RFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYA- 116
+Y+ ++ A +Q+ + + ++ R G N + T+L+D K G +S A
Sbjct: 367 VVSYSTLVDAFCKEGM----MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 422
Query: 117 ---NSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXX 173
N + + N V+++A+I + +A ELF +M + IPN + ++
Sbjct: 423 RLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM--DTAGVIPNLASYNAL-- 478
Query: 174 XXXXXXXXXXXXXVHGFILRRGLDSIMPVINAL-------------ITMYGRCG--EISI 218
+HGF+ + +D + ++N L ++G C +I
Sbjct: 479 -------------IHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEA 525
Query: 219 GERVFDKVK----NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLC 274
+ V +++K + + + +L+ Y +G + + + + M + + ++F ++
Sbjct: 526 AKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLID 585
Query: 275 ACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM---PFE 331
LV + F + + + + + M+D L + N+++ A L E M
Sbjct: 586 GLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLV 645
Query: 332 PGPTVWGSLL 341
P T + SL+
Sbjct: 646 PDRTAYTSLM 655
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 194 RGLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLISMYGNNGYGKK 249
RGL N++I +G+ G + F+++K+ PDV+++N+LI+ + G
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350
Query: 250 AIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMV 309
++ + M G+ P+ +S+ T++ A G++++ I F + + + P Y ++
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQA-IKFYVDMRRVGLVPNEYTYTSLI 409
Query: 310 DLLGRANRLDEAIKLIEDM 328
D + L +A +L +M
Sbjct: 410 DANCKIGNLSDAFRLGNEM 428