Miyakogusa Predicted Gene

Lj0g3v0253859.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0253859.1 Non Chatacterized Hit- tr|B3S8W0|B3S8W0_TRIAD
Putative uncharacterized protein OS=Trichoplax
adhaere,24.84,3e-18,seg,NULL; no description,NULL;
Syntaxin-18_N,SNARE-complex protein Syntaxin-18 N-terminal; t-snare
p,CUFF.16664.1
         (309 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G51740.1 | Symbols: SYP81, ATUFE1, ATSYP81, UFE1 | syntaxin o...   410   e-115

>AT1G51740.1 | Symbols: SYP81, ATUFE1, ATSYP81, UFE1 | syntaxin of
           plants 81 | chr1:19189063-19191188 FORWARD LENGTH=310
          Length = 310

 Score =  410 bits (1054), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/310 (68%), Positives = 240/310 (77%), Gaps = 1/310 (0%)

Query: 1   MAKARDRTEDFKDAVRHSARSLGYDEAKLASIFASFIIHKPPQRSPFYKAALKTLESIGE 60
           M++ RDRTEDFKD+VR+SA S+GY+E+K+AS  ASFIIHKP +RSPF KAA KTL+SI E
Sbjct: 1   MSRFRDRTEDFKDSVRNSAVSIGYNESKVASTMASFIIHKPKERSPFTKAAFKTLDSIKE 60

Query: 61  LEQFLLKHRKDYTDLHRTTEQERDSIEQEVSAFIKTCQEQIDVLKNSINNEEETSKGWLG 120
           LE F+LKHRKDY DLHRTTEQE+DSIEQEV+AFIK C+EQID+L NSI NEE  SKGWLG
Sbjct: 61  LELFMLKHRKDYVDLHRTTEQEKDSIEQEVAAFIKACKEQIDILINSIRNEEANSKGWLG 120

Query: 121 IATAKANADTIAHKHGVVLILSERLHPVTAQFDQLRAVRFQDAINRATPRRKLNRVTRKN 180
           +     NAD+IAHKHGVVLILSE+LH VTAQFDQLRA RFQD INRA PRRK  RV ++ 
Sbjct: 121 LPADNFNADSIAHKHGVVLILSEKLHSVTAQFDQLRATRFQDIINRAMPRRKPKRVIKEA 180

Query: 181 TTETSESGDMELREPDEL-RSEPLRVQQQLLDDETRALQVELTNLLDTVQETETKMVEMS 239
           T   +  G+ E  EPDE+        QQQLLDDET+ALQVEL+NLLD  ++TETKMVEMS
Sbjct: 181 TPINTTLGNSESIEPDEIQAQPRRLQQQQLLDDETQALQVELSNLLDGARQTETKMVEMS 240

Query: 240 ALNHLMSTHVLQQAHQIEHLYEQAVEATKNVEFGNKELSQAIQRNXXXXXXXXXXXXXXX 299
           ALNHLM+THVLQQA QIE LY+QAVEATKNVE GNKELSQAIQRN               
Sbjct: 241 ALNHLMATHVLQQAQQIEFLYDQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFFFVLT 300

Query: 300 XXXXXXDWYS 309
                 DWYS
Sbjct: 301 FSVLFLDWYS 310