Miyakogusa Predicted Gene

Lj0g3v0253489.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0253489.1 Non Chatacterized Hit- tr|I1P4A2|I1P4A2_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=3
SV=1,39.23,1e-16,seg,NULL; AAA-FAMILY ATPASE,NULL; AAA
ATPASE,NULL,CUFF.16634.1
         (172 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G19740.1 | Symbols:  | P-loop containing nucleoside triphosph...   150   4e-37
AT1G50140.1 | Symbols:  | P-loop containing nucleoside triphosph...   141   3e-34
AT1G50140.2 | Symbols:  | P-loop containing nucleoside triphosph...   141   3e-34
AT1G02890.1 | Symbols:  | AAA-type ATPase family protein | chr1:...    73   1e-13
AT1G02890.2 | Symbols:  | AAA-type ATPase family protein | chr1:...    73   1e-13
AT4G02480.1 | Symbols:  | AAA-type ATPase family protein | chr4:...    70   8e-13
AT1G62130.1 | Symbols:  | AAA-type ATPase family protein | chr1:...    64   5e-11
AT4G24860.1 | Symbols:  | P-loop containing nucleoside triphosph...    63   1e-10
AT1G64110.3 | Symbols:  | P-loop containing nucleoside triphosph...    54   4e-08
AT1G64110.2 | Symbols:  | P-loop containing nucleoside triphosph...    54   4e-08
AT1G64110.1 | Symbols:  | P-loop containing nucleoside triphosph...    54   4e-08
AT4G28000.1 | Symbols:  | P-loop containing nucleoside triphosph...    49   2e-06

>AT3G19740.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr3:6855944-6862930
           REVERSE LENGTH=993
          Length = 993

 Score =  150 bits (379), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 70/115 (60%), Positives = 87/115 (75%)

Query: 57  EWLRRESPVLTRRDKFKIQILTRILPWENINVSWDTFPYPIDEHTKSLLVEFADSHLRYN 116
           E  ++ESP + RR++FK + L RI PWE I +SW+TFPY I +HTK +LVE   SH+R  
Sbjct: 144 ECKKKESPFVNRRERFKNEFLRRIQPWEKIQLSWETFPYYIHDHTKDILVECVTSHIRQK 203

Query: 117 KFASSFGTGLASSSGRILLQSIPGTELYQERLVRALAQHLQVPLLVFDRSILTPY 171
             AS +G  L SSSGRILLQS+PGTELY+ERLVRALA+ +QVPLLV D S+L PY
Sbjct: 204 NAASIYGARLDSSSGRILLQSVPGTELYRERLVRALARDVQVPLLVLDSSVLAPY 258


>AT1G50140.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:18569921-18578663
           REVERSE LENGTH=1003
          Length = 1003

 Score =  141 bits (355), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 66/112 (58%), Positives = 82/112 (73%)

Query: 60  RRESPVLTRRDKFKIQILTRILPWENINVSWDTFPYPIDEHTKSLLVEFADSHLRYNKFA 119
           R+ESP L +R++ K + L RI PWE I +SW++FPY + EHTK  LVE   SH++     
Sbjct: 133 RKESPFLNKRERLKNEFLRRIQPWETIQLSWESFPYYVHEHTKDTLVECVSSHIKQKSMT 192

Query: 120 SSFGTGLASSSGRILLQSIPGTELYQERLVRALAQHLQVPLLVFDRSILTPY 171
           S +G  L SSSGRILLQS+PGTELY+ERLVRALA+  QVPLLV D S+L PY
Sbjct: 193 SKYGARLDSSSGRILLQSVPGTELYRERLVRALARDTQVPLLVLDSSVLAPY 244


>AT1G50140.2 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:18569921-18578663
           REVERSE LENGTH=981
          Length = 981

 Score =  141 bits (355), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 66/112 (58%), Positives = 82/112 (73%)

Query: 60  RRESPVLTRRDKFKIQILTRILPWENINVSWDTFPYPIDEHTKSLLVEFADSHLRYNKFA 119
           R+ESP L +R++ K + L RI PWE I +SW++FPY + EHTK  LVE   SH++     
Sbjct: 133 RKESPFLNKRERLKNEFLRRIQPWETIQLSWESFPYYVHEHTKDTLVECVSSHIKQKSMT 192

Query: 120 SSFGTGLASSSGRILLQSIPGTELYQERLVRALAQHLQVPLLVFDRSILTPY 171
           S +G  L SSSGRILLQS+PGTELY+ERLVRALA+  QVPLLV D S+L PY
Sbjct: 193 SKYGARLDSSSGRILLQSVPGTELYRERLVRALARDTQVPLLVLDSSVLAPY 244


>AT1G02890.1 | Symbols:  | AAA-type ATPase family protein |
           chr1:645372-651797 REVERSE LENGTH=1246
          Length = 1246

 Score = 72.8 bits (177), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/114 (35%), Positives = 66/114 (57%), Gaps = 1/114 (0%)

Query: 57  EWLRRESPVLTRRDKFKIQILTRILPWENINVSWDTFPYPIDEHTKSLLVEFADSHLRYN 116
           E+ R  + VLTRR   K  +   IL  ++I VS++ FPY +   TK +L+    +H++Y 
Sbjct: 405 EYERPSASVLTRRQAHKDSLRGGILNPQDIEVSFENFPYFLSGTTKDVLMISTYAHIKYG 464

Query: 117 KFASSFGTGLASSSGRILLQSIPGTELYQERLVRALAQHLQVPLLVFDRSILTP 170
           K  + + + L ++  RILL    G+E+YQE L +ALA+     L++ D S+L P
Sbjct: 465 KEYAEYASDLPTACPRILLSGPSGSEIYQEMLAKALAKQCGAKLMIVD-SLLLP 517


>AT1G02890.2 | Symbols:  | AAA-type ATPase family protein |
           chr1:645372-651797 REVERSE LENGTH=1218
          Length = 1218

 Score = 72.8 bits (177), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/114 (35%), Positives = 66/114 (57%), Gaps = 1/114 (0%)

Query: 57  EWLRRESPVLTRRDKFKIQILTRILPWENINVSWDTFPYPIDEHTKSLLVEFADSHLRYN 116
           E+ R  + VLTRR   K  +   IL  ++I VS++ FPY +   TK +L+    +H++Y 
Sbjct: 405 EYERPSASVLTRRQAHKDSLRGGILNPQDIEVSFENFPYFLSGTTKDVLMISTYAHIKYG 464

Query: 117 KFASSFGTGLASSSGRILLQSIPGTELYQERLVRALAQHLQVPLLVFDRSILTP 170
           K  + + + L ++  RILL    G+E+YQE L +ALA+     L++ D S+L P
Sbjct: 465 KEYAEYASDLPTACPRILLSGPSGSEIYQEMLAKALAKQCGAKLMIVD-SLLLP 517


>AT4G02480.1 | Symbols:  | AAA-type ATPase family protein |
           chr4:1082082-1088680 REVERSE LENGTH=1265
          Length = 1265

 Score = 70.1 bits (170), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 4/117 (3%)

Query: 57  EWLRR---ESPVLTRRDKFKIQILTRILPWENINVSWDTFPYPIDEHTKSLLVEFADSHL 113
           E+LR     S + TRR  FK  +   +L  +NI++S++ FPY +   TK +L+     H+
Sbjct: 424 EFLREFDLSSTISTRRQAFKDSLRGGVLNAQNIDISFENFPYYLSATTKGVLMISMYVHM 483

Query: 114 RYNKFASSFGTGLASSSGRILLQSIPGTELYQERLVRALAQHLQVPLLVFDRSILTP 170
                 ++F T L ++  RILL    G+E+YQE L +ALA+     L++ D S+L P
Sbjct: 484 NGGSKYANFATDLTTACPRILLSGPSGSEIYQEMLAKALAKQFGAKLMIVD-SLLLP 539


>AT1G62130.1 | Symbols:  | AAA-type ATPase family protein |
           chr1:22962365-22968920 REVERSE LENGTH=1043
          Length = 1043

 Score = 63.9 bits (154), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 1/95 (1%)

Query: 71  KFKIQILTRILPWENINVSWDTFPYPIDEHTKSLLVEFADSHL-RYNKFASSFGTGLASS 129
           KF+  I   I+  + +  S++ FPY + EHTK +L+  +D HL + N   + + + L   
Sbjct: 295 KFREYIRAGIVDGKRLEFSFENFPYYLSEHTKYVLLAVSDMHLNKMNIGYAPYASDLTIL 354

Query: 130 SGRILLQSIPGTELYQERLVRALAQHLQVPLLVFD 164
           + RILL    G+E+YQE L +ALA      LL+FD
Sbjct: 355 NPRILLSGPAGSEIYQEILAKALANSFNAKLLIFD 389


>AT4G24860.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr4:12801580-12808190
           REVERSE LENGTH=1122
          Length = 1122

 Score = 62.8 bits (151), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 1/81 (1%)

Query: 84  ENINVSWDTFPYPIDEHTKSLLVEFADSHLRYNKFASSFGTGLASSSGRILLQSIPGTEL 143
           EN+ VS+  FPY + E+TK+ L+  +  HL+  ++   F + +   + RILL    G+E+
Sbjct: 300 ENMEVSFKNFPYYLSEYTKAALLYASYIHLKKKEYVQ-FVSDMTPMNPRILLSGPAGSEI 358

Query: 144 YQERLVRALAQHLQVPLLVFD 164
           YQE L +ALA+ L+  LL+FD
Sbjct: 359 YQETLAKALARDLEAKLLIFD 379


>AT1G64110.3 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:23796887-23801255
           REVERSE LENGTH=827
          Length = 827

 Score = 54.3 bits (129), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 70  DKFKIQILTRILPWENINVSWDTFPYPIDEHTKSLLVEFADSHLRYNKFASSFGTGLASS 129
           DK + +IL +++      +++D FPY + E T+ LL   A  HL++  F +S  T   S 
Sbjct: 46  DKMEKEILRQVVDGRESKITFDEFPYYLSEQTRVLLTSAAYVHLKH--FDASKYTRNLSP 103

Query: 130 SGRILLQSIPGTELYQERLVRALAQHLQVPLLVFD 164
           + R +L S P  ELYQ+ L +ALA      LL+ D
Sbjct: 104 ASRAILLSGPA-ELYQQMLAKALAHFFDAKLLLLD 137


>AT1G64110.2 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:23796887-23801255
           REVERSE LENGTH=829
          Length = 829

 Score = 54.3 bits (129), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 70  DKFKIQILTRILPWENINVSWDTFPYPIDEHTKSLLVEFADSHLRYNKFASSFGTGLASS 129
           DK + +IL +++      +++D FPY + E T+ LL   A  HL++  F +S  T   S 
Sbjct: 46  DKMEKEILRQVVDGRESKITFDEFPYYLSEQTRVLLTSAAYVHLKH--FDASKYTRNLSP 103

Query: 130 SGRILLQSIPGTELYQERLVRALAQHLQVPLLVFD 164
           + R +L S P  ELYQ+ L +ALA      LL+ D
Sbjct: 104 ASRAILLSGPA-ELYQQMLAKALAHFFDAKLLLLD 137


>AT1G64110.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:23796887-23801240
           REVERSE LENGTH=824
          Length = 824

 Score = 54.3 bits (129), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 70  DKFKIQILTRILPWENINVSWDTFPYPIDEHTKSLLVEFADSHLRYNKFASSFGTGLASS 129
           DK + +IL +++      +++D FPY + E T+ LL   A  HL++  F +S  T   S 
Sbjct: 41  DKMEKEILRQVVDGRESKITFDEFPYYLSEQTRVLLTSAAYVHLKH--FDASKYTRNLSP 98

Query: 130 SGRILLQSIPGTELYQERLVRALAQHLQVPLLVFD 164
           + R +L S P  ELYQ+ L +ALA      LL+ D
Sbjct: 99  ASRAILLSGPA-ELYQQMLAKALAHFFDAKLLLLD 132


>AT4G28000.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr4:13925456-13929280
           FORWARD LENGTH=830
          Length = 830

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 70  DKFKIQILTRILPWENINVSWDTFPYPIDEHTKSLLVEFADSHLRYNKFASSFGTGLASS 129
           +K + +++ +I+     +V++D FPY + E T+ LL   A  HL+ +   S     LA  
Sbjct: 44  EKIEQELVRQIVDGRESSVTFDEFPYYLSEKTRLLLTSAAYVHLKQSDI-SKHTRNLAPG 102

Query: 130 SGRILLQSIPGTELYQERLVRALAQHLQVPLLVFD 164
           S  ILL S P  E YQ+ L +ALA + +  LL+ D
Sbjct: 103 SKAILL-SGPA-EFYQQMLAKALAHYFESKLLLLD 135