Miyakogusa Predicted Gene
- Lj0g3v0253409.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0253409.1 Non Chatacterized Hit- tr|J3L4R8|J3L4R8_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB01G4,53.85,0.00000000000003,GH3,GH3 auxin-responsive promoter;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.16720.1
(332 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G54510.1 | Symbols: GH3.6, DFL1 | Auxin-responsive GH3 family... 551 e-157
AT4G27260.1 | Symbols: GH3.5, WES1 | Auxin-responsive GH3 family... 550 e-157
AT2G14960.1 | Symbols: GH3.1 | Auxin-responsive GH3 family prote... 427 e-120
AT2G23170.1 | Symbols: GH3.3 | Auxin-responsive GH3 family prote... 414 e-116
AT4G37390.1 | Symbols: YDK1, GH3.2, BRU6, GH3-2, AUR3 | Auxin-re... 414 e-116
AT1G28130.1 | Symbols: GH3.17 | Auxin-responsive GH3 family prot... 388 e-108
AT1G59500.1 | Symbols: GH3.4 | Auxin-responsive GH3 family prote... 369 e-102
AT2G47750.1 | Symbols: GH3.9 | putative indole-3-acetic acid-ami... 353 7e-98
AT1G28130.2 | Symbols: GH3.17 | Auxin-responsive GH3 family prot... 334 5e-92
AT1G23160.1 | Symbols: | Auxin-responsive GH3 family protein | ... 309 2e-84
AT5G13320.1 | Symbols: PBS3, GDG1, WIN3, GH3.12 | Auxin-responsi... 308 4e-84
AT5G13370.1 | Symbols: | Auxin-responsive GH3 family protein | ... 287 9e-78
AT5G13360.3 | Symbols: | Auxin-responsive GH3 family protein | ... 278 5e-75
AT5G13360.2 | Symbols: | Auxin-responsive GH3 family protein | ... 277 7e-75
AT5G13360.1 | Symbols: | Auxin-responsive GH3 family protein | ... 277 7e-75
AT5G13350.1 | Symbols: | Auxin-responsive GH3 family protein | ... 277 8e-75
AT1G48660.1 | Symbols: | Auxin-responsive GH3 family protein | ... 276 1e-74
AT5G51470.1 | Symbols: | Auxin-responsive GH3 family protein | ... 272 2e-73
AT5G13380.1 | Symbols: | Auxin-responsive GH3 family protein | ... 262 3e-70
AT1G48670.1 | Symbols: | auxin-responsive GH3 family protein | ... 218 3e-57
AT2G46370.4 | Symbols: JAR1 | Auxin-responsive GH3 family protei... 198 3e-51
AT2G46370.2 | Symbols: JAR1, FIN219 | Auxin-responsive GH3 famil... 198 4e-51
AT2G46370.1 | Symbols: JAR1, FIN219 | Auxin-responsive GH3 famil... 198 4e-51
AT2G46370.3 | Symbols: JAR1, FIN219 | Auxin-responsive GH3 famil... 198 4e-51
AT4G03400.1 | Symbols: DFL2, GH3-10 | Auxin-responsive GH3 famil... 198 4e-51
AT1G48690.1 | Symbols: | Auxin-responsive GH3 family protein | ... 73 3e-13
>AT5G54510.1 | Symbols: GH3.6, DFL1 | Auxin-responsive GH3 family
protein | chr5:22131321-22133564 REVERSE LENGTH=612
Length = 612
Score = 551 bits (1420), Expect = e-157, Method: Compositional matrix adjust.
Identities = 261/312 (83%), Positives = 288/312 (92%), Gaps = 1/312 (0%)
Query: 6 SSGTSGGERKLMPTIEDELGRRTLLYSLLMPVMSQFVPDLEKGKGMYLLFIKSEAKTPGG 65
SSGTSGGERKLMPTIE+EL RR+LLYSLLMPVM QFVP L+KGKGMY LFIKSE+KTPGG
Sbjct: 109 SSGTSGGERKLMPTIEEELDRRSLLYSLLMPVMDQFVPGLDKGKGMYFLFIKSESKTPGG 168
Query: 66 IVARPVLTSYYKSSHFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEVFRV 125
+ ARPVLTSYYKSSHF++RPYDPYTNYTSPN+T+LC DSYQSMYSQ+LCGLCQ+KEV RV
Sbjct: 169 LPARPVLTSYYKSSHFKNRPYDPYTNYTSPNQTILCSDSYQSMYSQMLCGLCQHKEVLRV 228
Query: 126 GAVFASGFIRAIRFLEKHWPLLCNDIRTGTINPTIITDASVREAVSKIVKPDPKLADFIE 185
GAVFASGFIRAI+FLEKHWP L DIRTGT++ + ITD+SVREAV +I+KPDPKLADF+E
Sbjct: 229 GAVFASGFIRAIKFLEKHWPELARDIRTGTLS-SEITDSSVREAVGEILKPDPKLADFVE 287
Query: 186 AECSKRSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDHYSNGLPLVCTMYASSECYFGV 245
+EC K SWQGIITRLWPNTKYVDVIVTGTMSQYIP LD+YSNGLPLVCTMYASSECYFGV
Sbjct: 288 SECRKTSWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGV 347
Query: 246 NLNPLCKPSEVSYTLIPTMCYFEFLPVNRTNGVTDSIQTPRSLNEKEQQELVELVDVKLG 305
NL PLCKPSEVSYTLIP M YFEFLPV+R +GVT SI P++L EKEQQELV+LVDVKLG
Sbjct: 348 NLRPLCKPSEVSYTLIPNMAYFEFLPVHRNSGVTSSISLPKALTEKEQQELVDLVDVKLG 407
Query: 306 EEYELVVTTYAG 317
+EYELVVTTYAG
Sbjct: 408 QEYELVVTTYAG 419
>AT4G27260.1 | Symbols: GH3.5, WES1 | Auxin-responsive GH3 family
protein | chr4:13653704-13655892 FORWARD LENGTH=612
Length = 612
Score = 550 bits (1417), Expect = e-157, Method: Compositional matrix adjust.
Identities = 262/312 (83%), Positives = 288/312 (92%), Gaps = 1/312 (0%)
Query: 6 SSGTSGGERKLMPTIEDELGRRTLLYSLLMPVMSQFVPDLEKGKGMYLLFIKSEAKTPGG 65
SSGTSGGERKLMPTIE+EL RR+LLYSLLMPVMSQFVP LE GKGMY LFIKSE+KTPGG
Sbjct: 109 SSGTSGGERKLMPTIEEELDRRSLLYSLLMPVMSQFVPGLENGKGMYFLFIKSESKTPGG 168
Query: 66 IVARPVLTSYYKSSHFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEVFRV 125
+ ARPVLTSYYKSSHF++RPYDPYTNYTSPNET+LC DSYQSMYSQ+LCGLCQ++EV RV
Sbjct: 169 LPARPVLTSYYKSSHFKERPYDPYTNYTSPNETILCSDSYQSMYSQMLCGLCQHQEVLRV 228
Query: 126 GAVFASGFIRAIRFLEKHWPLLCNDIRTGTINPTIITDASVREAVSKIVKPDPKLADFIE 185
GAVFASGFIRAI+FLEKHW L DIRTGT++ ++ITD SVREAV+KI+KP PKLADF+E
Sbjct: 229 GAVFASGFIRAIKFLEKHWIELVRDIRTGTLS-SLITDPSVREAVAKILKPSPKLADFVE 287
Query: 186 AECSKRSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDHYSNGLPLVCTMYASSECYFGV 245
EC K SWQGIITRLWPNTKYVDVIVTGTMSQYIP LD+YSNGLPLVCTMYASSECYFGV
Sbjct: 288 FECKKSSWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGV 347
Query: 246 NLNPLCKPSEVSYTLIPTMCYFEFLPVNRTNGVTDSIQTPRSLNEKEQQELVELVDVKLG 305
NL PLCKPSEVSYTLIP+M YFEFLPV+R NGVT+SI P++L EKEQQELV+LVDVKLG
Sbjct: 348 NLRPLCKPSEVSYTLIPSMAYFEFLPVHRNNGVTNSINLPKALTEKEQQELVDLVDVKLG 407
Query: 306 EEYELVVTTYAG 317
+EYELVVTTYAG
Sbjct: 408 QEYELVVTTYAG 419
>AT2G14960.1 | Symbols: GH3.1 | Auxin-responsive GH3 family protein
| chr2:6451659-6453670 REVERSE LENGTH=590
Length = 590
Score = 427 bits (1097), Expect = e-120, Method: Compositional matrix adjust.
Identities = 203/312 (65%), Positives = 241/312 (77%), Gaps = 20/312 (6%)
Query: 6 SSGTSGGERKLMPTIEDELGRRTLLYSLLMPVMSQFVPDLEKGKGMYLLFIKSEAKTPGG 65
SSGTS GERKLMPTI++EL RR LLYSLLMPVM+ +VP L+KGKGMY LF+KSE KTPGG
Sbjct: 107 SSGTSAGERKLMPTIKEELDRRQLLYSLLMPVMNLYVPGLDKGKGMYFLFVKSETKTPGG 166
Query: 66 IVARPVLTSYYKSSHFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEVFRV 125
+ ARPVLTSYYKS HFR RPYDPY YTSPNE +LCPDS+QSMY+Q+LCGL V RV
Sbjct: 167 LPARPVLTSYYKSEHFRSRPYDPYNVYTSPNEAILCPDSFQSMYTQMLCGLLDRLSVLRV 226
Query: 126 GAVFASGFIRAIRFLEKHWPLLCNDIRTGTINPTIITDASVREAVSKIVKPDPKLADFIE 185
GAVFASG +RAIRFL+ HW +DI G ++ + ITD S+R+ +S I+KPDP LA+FI
Sbjct: 227 GAVFASGLLRAIRFLQLHWSRFAHDIELGCLD-SEITDPSIRQCMSGILKPDPVLAEFIR 285
Query: 186 AECSKRSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDHYSNGLPLVCTMYASSECYFGV 245
EC +W+ IITR+WPNTKY+DVIVTG M+QYIP L++YS GLP+ CTMYASSECYFG+
Sbjct: 286 RECKSDNWEKIITRIWPNTKYLDVIVTGAMAQYIPTLEYYSGGLPMACTMYASSECYFGL 345
Query: 246 NLNPLCKPSEVSYTLIPTMCYFEFLPVNRTNGVTDSIQTPRSLNEKEQQELVELVDVKLG 305
NLNP+ KPSEVSYT++P M YFEF+P+ T VELVDV +G
Sbjct: 346 NLNPMSKPSEVSYTIMPNMAYFEFIPLGGTKA-------------------VELVDVNIG 386
Query: 306 EEYELVVTTYAG 317
+EYELVVTTYAG
Sbjct: 387 KEYELVVTTYAG 398
>AT2G23170.1 | Symbols: GH3.3 | Auxin-responsive GH3 family protein
| chr2:9864125-9866502 REVERSE LENGTH=595
Length = 595
Score = 414 bits (1065), Expect = e-116, Method: Compositional matrix adjust.
Identities = 197/318 (61%), Positives = 253/318 (79%), Gaps = 17/318 (5%)
Query: 6 SSGTSGGERKLMPTIEDELGRRTLLYSLLMPVMSQFVPDLEKGKGMYLLFIKSEAKTPGG 65
SSGTS GERKLMPTI++++ RR LLYSLLMPVM+ +VP L+KGK +Y LF+K+E+KTPGG
Sbjct: 107 SSGTSAGERKLMPTIDEDMDRRQLLYSLLMPVMNLYVPGLDKGKALYFLFVKTESKTPGG 166
Query: 66 IVARPVLTSYYKSSHFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEVFRV 125
+ ARPVLTSYYKS F+ RP DPY YTSPNE +LCPDS QSMY+Q+LCGL EV R+
Sbjct: 167 LPARPVLTSYYKSEQFKRRPNDPYNVYTSPNEAILCPDSSQSMYTQMLCGLLMRHEVLRL 226
Query: 126 GAVFASGFIRAIRFLEKHWPLLCNDIRTGTINPTIITDASVREAVSKIV-KPDPKLADFI 184
GAVFASG +RAI FL+ +W L +DI TGT++ + I+D +++E++SKI+ KPD +LADFI
Sbjct: 227 GAVFASGLLRAIGFLQTNWKELADDISTGTLS-SRISDPAIKESMSKILTKPDQELADFI 285
Query: 185 EAECSK-RSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDHYSNGLPLVCTMYASSECYF 243
+ C + SW+GIIT++WPNTKY+DVIVTG M+QYIP+L++YS GLP+ CTMYASSE YF
Sbjct: 286 TSVCGQDNSWEGIITKIWPNTKYLDVIVTGAMAQYIPMLEYYSGGLPMACTMYASSESYF 345
Query: 244 GVNLNPLCKPSEVSYTLIPTMCYFEFLPVNRTNGVTDSIQTPRSLNEKEQQELVELVDVK 303
G+NL P+CKPSEVSYT++P M YFEFLP + + P E+ ELVEL DV+
Sbjct: 346 GINLKPMCKPSEVSYTIMPNMAYFEFLPHH---------EVP-----TEKSELVELADVE 391
Query: 304 LGEEYELVVTTYAGKNKF 321
+G+EYELV+TTYAG N++
Sbjct: 392 VGKEYELVITTYAGLNRY 409
>AT4G37390.1 | Symbols: YDK1, GH3.2, BRU6, GH3-2, AUR3 |
Auxin-responsive GH3 family protein |
chr4:17579722-17581768 FORWARD LENGTH=603
Length = 603
Score = 414 bits (1063), Expect = e-116, Method: Compositional matrix adjust.
Identities = 198/314 (63%), Positives = 248/314 (78%), Gaps = 11/314 (3%)
Query: 6 SSGTSGGERKLMPTIEDELGRRTLLYSLLMPVMSQFVPDLEKGKGMYLLFIKSEAKTPGG 65
SSGTS GERKLMPTIE++L RR LLYSLLMPVM+ +VP L+KGKG+Y LF+KSE+KT GG
Sbjct: 108 SSGTSAGERKLMPTIEEDLDRRQLLYSLLMPVMNLYVPGLDKGKGLYFLFVKSESKTSGG 167
Query: 66 IVARPVLTSYYKSSHFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEVFRV 125
+ ARPVLTSYYKS HF+ RPYDPY YTSPNE +LC DS QSMY+Q+LCGL EV R+
Sbjct: 168 LPARPVLTSYYKSDHFKRRPYDPYNVYTSPNEAILCSDSSQSMYAQMLCGLLMRHEVLRL 227
Query: 126 GAVFASGFIRAIRFLEKHWPLLCNDIRTGTINPTIITDASVREAVSKIV-KPDPKLADFI 184
GAVFASG +RAI FL+ +W L DI TGT++ I D +++ +SKI+ KPD +LA+F+
Sbjct: 228 GAVFASGLLRAISFLQNNWKELARDISTGTLSSRIF-DPAIKNRMSKILTKPDQELAEFL 286
Query: 185 EAECSKRSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDHYSNGLPLVCTMYASSECYFG 244
CS+ +W+GIIT++WPNTKY+DVIVTG M+QYIP L++YS GLP+ CTMYASSE YFG
Sbjct: 287 VGVCSQENWEGIITKIWPNTKYLDVIVTGAMAQYIPTLEYYSGGLPMACTMYASSESYFG 346
Query: 245 VNLNPLCKPSEVSYTLIPTMCYFEFLPVNRT-NGVTDSIQTPRSLNEKEQQELVELVDVK 303
+NL P+CKPSEVSYT++P M YFEFLP N +G ++ SL+E LVEL +V+
Sbjct: 347 INLKPMCKPSEVSYTIMPNMAYFEFLPHNHDGDGAAEA-----SLDE---TSLVELANVE 398
Query: 304 LGEEYELVVTTYAG 317
+G+EYELV+TTYAG
Sbjct: 399 VGKEYELVITTYAG 412
>AT1G28130.1 | Symbols: GH3.17 | Auxin-responsive GH3 family protein
| chr1:9825431-9827883 FORWARD LENGTH=609
Length = 609
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/320 (57%), Positives = 245/320 (76%), Gaps = 6/320 (1%)
Query: 3 LFFSSGTSGGERKLMPTIEDELGRRTLLYSLLMPVMSQFVPDLEKGKGMYLLFIKSEAKT 62
L SSGTS G+ KLMP+ +EL R+T YS+L+P+M+++V L++GKGMYLLFIK E KT
Sbjct: 96 LLTSSGTSAGKPKLMPSTAEELERKTFFYSMLVPIMNKYVDGLDEGKGMYLLFIKPEIKT 155
Query: 63 PGGIVARPVLTSYYKSSHFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEV 122
P G++ARPVLTSYYKS HFR+RP++ Y YTSP++T+LC DS QSMY QLLCGL Q V
Sbjct: 156 PSGLMARPVLTSYYKSQHFRNRPFNKYNVYTSPDQTILCQDSKQSMYCQLLCGLVQRSHV 215
Query: 123 FRVGAVFASGFIRAIRFLEKHWPLLCNDIRTGTINPTIITDASVREAVSKIVK-PDPKLA 181
RVGAVFAS F+RA++FLE H+ LC DIRTGT+ + ITD+S R++V I+ P+ +LA
Sbjct: 216 LRVGAVFASAFLRAVKFLEDHYKELCADIRTGTVT-SWITDSSCRDSVLSILNGPNQELA 274
Query: 182 DFIEAECSKRSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDHYSNGLPLVCTMYASSEC 241
D IE+EC+++SW+GI+ R+WP KYV+VIVTG+M+QYIP L+ YS GLPLV TMYASSEC
Sbjct: 275 DEIESECAEKSWEGILRRIWPKAKYVEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSEC 334
Query: 242 YFGVNLNPLCKPSEVSYTLIPTMCYFEFLPVNRTN----GVTDSIQTPRSLNEKEQQELV 297
YFG+NLNPLC P++VSYTL+P M YFEFLPV+ + T + ++ +V
Sbjct: 335 YFGINLNPLCDPADVSYTLLPNMAYFEFLPVDDKSHEEIHFATHSNTDDDDDALKEDLIV 394
Query: 298 ELVDVKLGEEYELVVTTYAG 317
LV+V++G+ YE+V+TT+ G
Sbjct: 395 NLVNVEVGQYYEIVITTFTG 414
>AT1G59500.1 | Symbols: GH3.4 | Auxin-responsive GH3 family protein
| chr1:21854493-21856614 REVERSE LENGTH=597
Length = 597
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/315 (57%), Positives = 232/315 (73%), Gaps = 19/315 (6%)
Query: 6 SSGTSGGERKLMPTIEDELGRRTLLYSLLMPVMSQFVPDLEKGKGMYLLFIKSEAKTPGG 65
SSGTS GERKLMPTIE+++ RR LL +LLMPVM+ +VP L+KGKG+Y LF+KSE+ T GG
Sbjct: 108 SSGTSAGERKLMPTIEEDINRRQLLGNLLMPVMNLYVPGLDKGKGLYFLFVKSESTTSGG 167
Query: 66 IVARPVLTSYYKSSHFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEVFRV 125
+ ARP LTSYYKS +FR D + YTSP E +LC DS QSMY+Q+LCGL EV R+
Sbjct: 168 LPARPALTSYYKSDYFRTSDSD--SVYTSPKEAILCCDSSQSMYTQMLCGLLMRHEVNRL 225
Query: 126 GAVFASGFIRAIRFLEKHWPLLCNDIRTGTINPTIITDASVREAVSKIV-KPDPKLADFI 184
GAVF SG +RAI FL+ +W L DI TGT++ I D +++ +S I+ KPD +LA+F+
Sbjct: 226 GAVFPSGLLRAISFLQNNWKELSQDISTGTLSSKIF-DHAIKTRMSNILNKPDQELAEFL 284
Query: 185 EAECSKRSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDHYSNGLPLVCTMYASSECYFG 244
CS+ +W+GIIT++WPNTKY+DVIVTG M++YIP+L++YS GLP+ +YASSE YFG
Sbjct: 285 IGVCSQENWEGIITKIWPNTKYLDVIVTGAMAEYIPMLEYYSGGLPMASMIYASSESYFG 344
Query: 245 VNLNPLCKPSEVSYTLIPTMCYFEFLPVNR--TNGVTDSIQTPRSLNEKEQQELVELVDV 302
+NLNP+CKPSEVSYT+ P M YFEFLP N GV E LVEL DV
Sbjct: 345 INLNPMCKPSEVSYTIFPNMAYFEFLPHNHDGDGGV-------------EATSLVELADV 391
Query: 303 KLGEEYELVVTTYAG 317
++G+EYELV+TTYAG
Sbjct: 392 EVGKEYELVITTYAG 406
>AT2G47750.1 | Symbols: GH3.9 | putative indole-3-acetic acid-amido
synthetase GH3.9 | chr2:19560307-19562974 REVERSE
LENGTH=585
Length = 585
Score = 353 bits (907), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 173/317 (54%), Positives = 235/317 (74%), Gaps = 12/317 (3%)
Query: 6 SSGTSGGERKLMPTIEDELGRRTLLYSLLMPVMSQFVPDLEKGKGMYLLFIKSEAKTPGG 65
SSGTS GE KLMPTI ++L RRT LY+L++P++++++ L+KGK MYL F+K+E TP G
Sbjct: 95 SSGTSAGEPKLMPTIPEDLDRRTFLYNLIIPIVNKYITGLDKGKAMYLNFVKAETSTPCG 154
Query: 66 IVARPVLTSYYKSSHFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEVFRV 125
+ R VLTSYYKS HF+ RPYDP+ + TSP +T+LC DS QSMY QLL GL +V R+
Sbjct: 155 LPIRAVLTSYYKSKHFQCRPYDPFNDLTSPIQTILCEDSNQSMYCQLLAGLIHRHKVMRL 214
Query: 126 GAVFASGFIRAIRFLEKHWPLLCNDIRTGTINPTIITDASVREAVS-KIVKPDPKLADFI 184
GAVFAS F+RAI +LEK W LC DIRTG++NP +ITD + A+S ++ P+P+LA I
Sbjct: 215 GAVFASAFLRAISYLEKKWSQLCEDIRTGSLNP-MITDPGCQMAMSCLLMSPNPELASEI 273
Query: 185 EAECSKRSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDHYSNG-LPLVCTMYASSECYF 243
E C + SW+GI+ +LWP K+++ +VTG+M+QYIP L+ +S G +PLVC MYASSE YF
Sbjct: 274 EEICGRSSWKGILCQLWPKAKFIEAVVTGSMAQYIPALEFFSQGKIPLVCPMYASSETYF 333
Query: 244 GVNLNPLCKPSEVSYTLIPTMCYFEFLPVNRTNGVTDSIQTPRSLNEKEQ---QELVELV 300
GVN+ PL KPS+V +TL+P MCYFEF+P+ + ++ L++ EQ ++V+LV
Sbjct: 334 GVNVEPLSKPSDVVFTLLPNMCYFEFIPLGKNGTLS------FDLDDDEQVPCDKVVDLV 387
Query: 301 DVKLGEEYELVVTTYAG 317
+VKLG YELVVTT+AG
Sbjct: 388 NVKLGRYYELVVTTFAG 404
>AT1G28130.2 | Symbols: GH3.17 | Auxin-responsive GH3 family protein
| chr1:9826379-9827883 FORWARD LENGTH=466
Length = 466
Score = 334 bits (856), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 160/276 (57%), Positives = 210/276 (76%), Gaps = 6/276 (2%)
Query: 51 MYLLFIKSEAKTPGGIVARPVLTSYYKSSHFRDRPYDPYTNYTSPNETVLCPDSYQSMYS 110
MYLLFIK E KTP G++ARPVLTSYYKS HFR+RP++ Y YTSP++T+LC DS QSMY
Sbjct: 1 MYLLFIKPEIKTPSGLMARPVLTSYYKSQHFRNRPFNKYNVYTSPDQTILCQDSKQSMYC 60
Query: 111 QLLCGLCQNKEVFRVGAVFASGFIRAIRFLEKHWPLLCNDIRTGTINPTIITDASVREAV 170
QLLCGL Q V RVGAVFAS F+RA++FLE H+ LC DIRTGT+ + ITD+S R++V
Sbjct: 61 QLLCGLVQRSHVLRVGAVFASAFLRAVKFLEDHYKELCADIRTGTVT-SWITDSSCRDSV 119
Query: 171 SKIVK-PDPKLADFIEAECSKRSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDHYSNGL 229
I+ P+ +LAD IE+EC+++SW+GI+ R+WP KYV+VIVTG+M+QYIP L+ YS GL
Sbjct: 120 LSILNGPNQELADEIESECAEKSWEGILRRIWPKAKYVEVIVTGSMAQYIPTLEFYSGGL 179
Query: 230 PLVCTMYASSECYFGVNLNPLCKPSEVSYTLIPTMCYFEFLPVNRTN----GVTDSIQTP 285
PLV TMYASSECYFG+NLNPLC P++VSYTL+P M YFEFLPV+ + T
Sbjct: 180 PLVSTMYASSECYFGINLNPLCDPADVSYTLLPNMAYFEFLPVDDKSHEEIHFATHSNTD 239
Query: 286 RSLNEKEQQELVELVDVKLGEEYELVVTTYAGKNKF 321
+ ++ +V LV+V++G+ YE+V+TT+ G ++
Sbjct: 240 DDDDALKEDLIVNLVNVEVGQYYEIVITTFTGLYRY 275
>AT1G23160.1 | Symbols: | Auxin-responsive GH3 family protein |
chr1:8209232-8211325 FORWARD LENGTH=578
Length = 578
Score = 309 bits (792), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/315 (48%), Positives = 214/315 (67%), Gaps = 20/315 (6%)
Query: 5 FSSGTSGGERKLMPTIEDELGRRTLLYSLLMPVMSQFVPDLEKGKGMYLLFIKSEAKTPG 64
S+GTSGG +K+MP E L T +Y L M ++S V D+EKGK M F K E+ TP
Sbjct: 97 LSTGTSGGAQKMMPWNEKYLDNLTFMYDLRMHIISNNVKDVEKGKAMMFYFTKLESITPS 156
Query: 65 GIVARPVLTSYYKSSHFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEVFR 124
G+ AR +SY KS++F++RP + Y +YTSP+E LCPD+ Q++Y LLCGL Q EV R
Sbjct: 157 GLPARVASSSYLKSNYFKNRPSNWYYSYTSPDEVTLCPDNKQNLYCHLLCGLVQRNEVTR 216
Query: 125 VGAVFASGFIRAIRFLEKHWPLLCNDIRTGTINPTIITDASVREAVSKIV-KPDPKLADF 183
+G++FAS +RAI+FLE W LC++IR+G ++ ITD R++VS ++ P P+ AD
Sbjct: 217 MGSIFASVMVRAIKFLEDSWEELCSNIRSGQLSE-WITDIGCRDSVSLVLGGPHPEAADT 275
Query: 184 IEAECSKRSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDHYSNG-LPLVCTMYASSECY 242
IE C+++ W+GIITRLWP KY++ IVTG+M QY+P L++YSN LPL+ T+YASSE
Sbjct: 276 IEQICNQKCWKGIITRLWPKAKYIETIVTGSMVQYVPTLNYYSNNMLPLISTIYASSETQ 335
Query: 243 FGVNLNPLCKPSEVSYTLIPTMCYFEFLPVNRTNGVTDSIQTPRSLNEKEQQELVELVDV 302
FG+NLNP+CKP +VSYT +P + YFEF+PV + ++ ++V+L DV
Sbjct: 336 FGLNLNPMCKPEDVSYTFMPNVSYFEFIPV-----------------DGDKNDVVDLADV 378
Query: 303 KLGEEYELVVTTYAG 317
KLG YE VVT ++G
Sbjct: 379 KLGCCYEAVVTNFSG 393
>AT5G13320.1 | Symbols: PBS3, GDG1, WIN3, GH3.12 | Auxin-responsive
GH3 family protein | chr5:4268902-4270896 FORWARD
LENGTH=575
Length = 575
Score = 308 bits (789), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 149/316 (47%), Positives = 212/316 (67%), Gaps = 18/316 (5%)
Query: 3 LFFSSGTSGGERKLMPTIEDELGRRTLLYSLLMPVMSQFVPDLEKGKGMYLLFIKSEAKT 62
SSGTSGG +K+MP L T +Y L M V+++ V +E+GKGM LF K E+ T
Sbjct: 92 FLLSSGTSGGAQKMMPWNNKYLDNLTFIYDLRMQVITKHVKGVEEGKGMMFLFTKQESMT 151
Query: 63 PGGIVARPVLTSYYKSSHFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEV 122
P G+ AR +SY+KS +F++RP + Y +YTSP+E +LCP++ +S+Y LLCGL Q EV
Sbjct: 152 PSGLPARVATSSYFKSDYFKNRPSNWYYSYTSPDEVILCPNNTESLYCHLLCGLVQRDEV 211
Query: 123 FRVGAVFASGFIRAIRFLEKHWPLLCNDIRTGTINPTIITDASVREAVSKIV-KPDPKLA 181
R G++FAS +RAI L+ W LC++IR+G ++ +TD + +VS ++ P P+LA
Sbjct: 212 VRTGSIFASVMVRAIEVLKNSWEELCSNIRSGHLS-NWVTDLGCQNSVSLVLGGPRPELA 270
Query: 182 DFIEAECSKRSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDHYSNGLPLVCTMYASSEC 241
D IE C++ SW+GI+ RLWPNTKY++ +VTG+M QY+P+L++Y N LPLV T Y SSE
Sbjct: 271 DTIEEICNQNSWKGIVKRLWPNTKYIETVVTGSMGQYVPMLNYYCNDLPLVSTTYGSSET 330
Query: 242 YFGVNLNPLCKPSEVSYTLIPTMCYFEFLPVNRTNGVTDSIQTPRSLNEKEQQELVELVD 301
FG+NL+PLCKP +VSYT +P M YFEF+P ++ ++ ++V+L D
Sbjct: 331 TFGINLDPLCKPEDVSYTFMPNMSYFEFIP----------------MDGGDKNDVVDLED 374
Query: 302 VKLGEEYELVVTTYAG 317
VKLG YE VVT +AG
Sbjct: 375 VKLGCTYEPVVTNFAG 390
>AT5G13370.1 | Symbols: | Auxin-responsive GH3 family protein |
chr5:4286996-4289424 FORWARD LENGTH=595
Length = 595
Score = 287 bits (734), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 148/318 (46%), Positives = 204/318 (64%), Gaps = 12/318 (3%)
Query: 2 ILFFSSGTSGGERKLMPTIEDELGRRTLLYSLLMPVMSQFVPDLEKGKGMYLLFIKSEAK 61
+L SSGTSGG KL+P ++L +R SL P++ + + L +GK + F+ E+K
Sbjct: 93 VLLTSSGTSGGVPKLIPLTTEDLEQRISFSSLYAPLLYKHIDGLSEGKSLIFYFVTRESK 152
Query: 62 TPGGIVARPVLTSYYKS-SHFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNK 120
T G++ R ++TS+ KS +D SP+ C D+ QSMY QLLCGL +
Sbjct: 153 TANGLMVRTMVTSFLKSIKQTNSFLWDSLQ--VSPHAITTCADTTQSMYCQLLCGLLERD 210
Query: 121 EVFRVGAVFASGFIRAIRFLEKHWPLLCNDIRTGTINPTIITDASVREAVSK-IVKPDPK 179
V R+GA FAS F++ I+FLE HWP LC++IRTG ++ ITDA+ + K + P+P+
Sbjct: 211 NVARLGAPFASSFLKVIKFLEDHWPELCSNIRTGRLS-DWITDATCTSGIGKFLTAPNPE 269
Query: 180 LADFIEAECSKRSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDHYSNGLPLVCTMYASS 239
LA IE ECSK SW+ I+ RLWP K ++ I+TGTM+QYIP+L+ YS GLPL + Y SS
Sbjct: 270 LASLIEQECSKTSWEAILKRLWPKAKCIESIITGTMAQYIPLLEFYSGGLPLTSSFYGSS 329
Query: 240 ECYFGVNLNPLCKPSEVSYTLIPTMCYFEFLPVNRTNGVTDSIQTPRSLNEKEQQELVEL 299
EC+ GVN NPLCKPS+VSYT+IP M YFEFL V + + T E+ +V+L
Sbjct: 330 ECFMGVNFNPLCKPSDVSYTIIPCMGYFEFLEVEKDHQEAGHDPT-------EKPVVVDL 382
Query: 300 VDVKLGEEYELVVTTYAG 317
VDVK+G +YE VVTT++G
Sbjct: 383 VDVKIGHDYEPVVTTFSG 400
>AT5G13360.3 | Symbols: | Auxin-responsive GH3 family protein |
chr5:4283488-4286120 FORWARD LENGTH=672
Length = 672
Score = 278 bits (710), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 147/320 (45%), Positives = 202/320 (63%), Gaps = 17/320 (5%)
Query: 2 ILFFSSGTSGGERKLMPTIEDELGRRTLLYSLLMPVMSQFVPDLEKGKGMYLLFIKSEAK 61
+L SSGTSGG KL+P +EL +R SL P++ +++ + + K L F+ E++
Sbjct: 171 VLLTSSGTSGGVPKLIPLTTEELEQRISFASLYRPLLYKYIEGIRERKSFMLYFVTRESE 230
Query: 62 TPGGIVARPVLTSYYKSSHFRDRPYDPY---TNYTSPNETVLCPDSYQSMYSQLLCGLCQ 118
T GI+ R ++T KS P + + + SP+ C D+ QSMY QLLCGL Q
Sbjct: 231 TASGILVRTMITCVLKSV----TPANSFIWDQSQISPHAITTCSDTTQSMYCQLLCGLLQ 286
Query: 119 NKEVFRVGAVFASGFIRAIRFLEKHWPLLCNDIRTGTINPTIITDASVREAVSK-IVKPD 177
V R+GA FAS F++ I+FLE HWP C++IRTG ++ ITD + K + P+
Sbjct: 287 RDNVGRLGAPFASSFLKIIKFLEDHWPEFCSNIRTGCLS-DWITDPQCVSGIGKFLTAPN 345
Query: 178 PKLADFIEAECSKRSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDHYSNGLPLVCTMYA 237
P+LA IE ECS+ SW+ I+ RLWP K ++ IVTGTM+QY P+L+ YS GLP++ T Y
Sbjct: 346 PELASLIEQECSQTSWEAIVKRLWPKAKCIEAIVTGTMAQYNPLLEFYSGGLPVISTFYG 405
Query: 238 SSECYFGVNLNPLCKPSEVSYTLIPTMCYFEFLPVNRTNGVTDSIQTPRSLNEKEQQELV 297
SSEC+FG+NLNPL KP+EVSYT+IP M YFEFL V + +S P E +V
Sbjct: 406 SSECFFGLNLNPLSKPNEVSYTIIPCMAYFEFLEVEKD---YESGHDP-----AENPVVV 457
Query: 298 ELVDVKLGEEYELVVTTYAG 317
+LVDVK+G +YE VVTT+AG
Sbjct: 458 DLVDVKIGHDYEPVVTTFAG 477
>AT5G13360.2 | Symbols: | Auxin-responsive GH3 family protein |
chr5:4283805-4286120 FORWARD LENGTH=594
Length = 594
Score = 277 bits (709), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 147/320 (45%), Positives = 202/320 (63%), Gaps = 17/320 (5%)
Query: 2 ILFFSSGTSGGERKLMPTIEDELGRRTLLYSLLMPVMSQFVPDLEKGKGMYLLFIKSEAK 61
+L SSGTSGG KL+P +EL +R SL P++ +++ + + K L F+ E++
Sbjct: 93 VLLTSSGTSGGVPKLIPLTTEELEQRISFASLYRPLLYKYIEGIRERKSFMLYFVTRESE 152
Query: 62 TPGGIVARPVLTSYYKSSHFRDRPYDPY---TNYTSPNETVLCPDSYQSMYSQLLCGLCQ 118
T GI+ R ++T KS P + + + SP+ C D+ QSMY QLLCGL Q
Sbjct: 153 TASGILVRTMITCVLKSV----TPANSFIWDQSQISPHAITTCSDTTQSMYCQLLCGLLQ 208
Query: 119 NKEVFRVGAVFASGFIRAIRFLEKHWPLLCNDIRTGTINPTIITDASVREAVSK-IVKPD 177
V R+GA FAS F++ I+FLE HWP C++IRTG ++ ITD + K + P+
Sbjct: 209 RDNVGRLGAPFASSFLKIIKFLEDHWPEFCSNIRTGCLS-DWITDPQCVSGIGKFLTAPN 267
Query: 178 PKLADFIEAECSKRSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDHYSNGLPLVCTMYA 237
P+LA IE ECS+ SW+ I+ RLWP K ++ IVTGTM+QY P+L+ YS GLP++ T Y
Sbjct: 268 PELASLIEQECSQTSWEAIVKRLWPKAKCIEAIVTGTMAQYNPLLEFYSGGLPVISTFYG 327
Query: 238 SSECYFGVNLNPLCKPSEVSYTLIPTMCYFEFLPVNRTNGVTDSIQTPRSLNEKEQQELV 297
SSEC+FG+NLNPL KP+EVSYT+IP M YFEFL V + +S P E +V
Sbjct: 328 SSECFFGLNLNPLSKPNEVSYTIIPCMAYFEFLEVEKD---YESGHDP-----AENPVVV 379
Query: 298 ELVDVKLGEEYELVVTTYAG 317
+LVDVK+G +YE VVTT+AG
Sbjct: 380 DLVDVKIGHDYEPVVTTFAG 399
>AT5G13360.1 | Symbols: | Auxin-responsive GH3 family protein |
chr5:4283805-4286120 FORWARD LENGTH=594
Length = 594
Score = 277 bits (709), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 147/320 (45%), Positives = 202/320 (63%), Gaps = 17/320 (5%)
Query: 2 ILFFSSGTSGGERKLMPTIEDELGRRTLLYSLLMPVMSQFVPDLEKGKGMYLLFIKSEAK 61
+L SSGTSGG KL+P +EL +R SL P++ +++ + + K L F+ E++
Sbjct: 93 VLLTSSGTSGGVPKLIPLTTEELEQRISFASLYRPLLYKYIEGIRERKSFMLYFVTRESE 152
Query: 62 TPGGIVARPVLTSYYKSSHFRDRPYDPY---TNYTSPNETVLCPDSYQSMYSQLLCGLCQ 118
T GI+ R ++T KS P + + + SP+ C D+ QSMY QLLCGL Q
Sbjct: 153 TASGILVRTMITCVLKSV----TPANSFIWDQSQISPHAITTCSDTTQSMYCQLLCGLLQ 208
Query: 119 NKEVFRVGAVFASGFIRAIRFLEKHWPLLCNDIRTGTINPTIITDASVREAVSK-IVKPD 177
V R+GA FAS F++ I+FLE HWP C++IRTG ++ ITD + K + P+
Sbjct: 209 RDNVGRLGAPFASSFLKIIKFLEDHWPEFCSNIRTGCLS-DWITDPQCVSGIGKFLTAPN 267
Query: 178 PKLADFIEAECSKRSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDHYSNGLPLVCTMYA 237
P+LA IE ECS+ SW+ I+ RLWP K ++ IVTGTM+QY P+L+ YS GLP++ T Y
Sbjct: 268 PELASLIEQECSQTSWEAIVKRLWPKAKCIEAIVTGTMAQYNPLLEFYSGGLPVISTFYG 327
Query: 238 SSECYFGVNLNPLCKPSEVSYTLIPTMCYFEFLPVNRTNGVTDSIQTPRSLNEKEQQELV 297
SSEC+FG+NLNPL KP+EVSYT+IP M YFEFL V + +S P E +V
Sbjct: 328 SSECFFGLNLNPLSKPNEVSYTIIPCMAYFEFLEVEKD---YESGHDP-----AENPVVV 379
Query: 298 ELVDVKLGEEYELVVTTYAG 317
+LVDVK+G +YE VVTT+AG
Sbjct: 380 DLVDVKIGHDYEPVVTTFAG 399
>AT5G13350.1 | Symbols: | Auxin-responsive GH3 family protein |
chr5:4279884-4282287 FORWARD LENGTH=587
Length = 587
Score = 277 bits (708), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 146/322 (45%), Positives = 201/322 (62%), Gaps = 20/322 (6%)
Query: 2 ILFFSSGTSGGERKLMPTIEDELGRRTLLYSLLMPVMSQFVPDLEKGKGMYLLFIKSEAK 61
+L SSGT+ G + L+P ++ +R + SL ++ ++V + +GK + F+ E +
Sbjct: 93 LLVMSSGTTAGIQNLIPLTTEDGEQRIMFGSLYRSLLYKYVEGIREGKSLTFYFVNPERE 152
Query: 62 TPGGIVARPVLTSYYKS-----SHFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGL 116
T GI+ R ++T KS S DR SP+E C D+ QSMY QLLCGL
Sbjct: 153 TASGILIRTMITCILKSVNKTNSSLWDRLQ------ISPHEISTCEDTTQSMYCQLLCGL 206
Query: 117 CQNKEVFRVGAVFASGFIRAIRFLEKHWPLLCNDIRTGTINPTIITDASVREAVSK-IVK 175
Q V R+GA FAS FIR I++LE HW LC++IRTG ++ ITD +SK +
Sbjct: 207 LQRDNVARLGAPFASVFIRVIKYLEGHWQELCSNIRTGRLS-DWITDPQCVSGISKFLTA 265
Query: 176 PDPKLADFIEAECSKRSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDHYSNGLPLVCTM 235
P+P LA IE ECSK SW+ I+ RLWP K V+ +VTG+M+QYIP+L+ Y GLPL+ +
Sbjct: 266 PNPDLASLIEQECSKTSWEAIVKRLWPKAKCVEAVVTGSMAQYIPLLEFYGGGLPLISSW 325
Query: 236 YASSECYFGVNLNPLCKPSEVSYTLIPTMCYFEFLPVNRTNGVTDSIQTPRSLNEKEQQE 295
Y SSEC+ GVN+NPLCKPS+VSYT+IP+M YFEFL V + Q L+ E
Sbjct: 326 YGSSECFMGVNVNPLCKPSDVSYTIIPSMAYFEFLEVKKD-------QQEAGLDPIENHV 378
Query: 296 LVELVDVKLGEEYELVVTTYAG 317
+V+LVDVK+G +YE VVTT++G
Sbjct: 379 VVDLVDVKIGHDYEPVVTTFSG 400
>AT1G48660.1 | Symbols: | Auxin-responsive GH3 family protein |
chr1:17995948-17997972 REVERSE LENGTH=573
Length = 573
Score = 276 bits (707), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 144/318 (45%), Positives = 202/318 (63%), Gaps = 18/318 (5%)
Query: 6 SSGTSGGERKLMPTIEDELGRRTLLYSLLMPVMSQFVPDLEKGKGMYLLFIKSEAKTPGG 65
S+GTSGG K+ P + + L ++ + S D EKGK M L+ + E+KTP G
Sbjct: 90 STGTSGGIHKIFPVNDKYIENLGYLLAVSSLITSNDKVD-EKGKKMAFLYNRLESKTPSG 148
Query: 66 IVARPVLTSYYKSSHFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEVFRV 125
+ TSY+ S +F++R + YTSP++ +LCPD+ QS+Y LLCGL Q ++V V
Sbjct: 149 LALSSSFTSYFMSDYFKNRSSKCNSEYTSPDQVILCPDNNQSVYCHLLCGLSQREKVVGV 208
Query: 126 GAVFASGFIRAIRFLEKHWPLLCNDIRTGTINPTIITDASVREAVSKIVK-PDPKLADFI 184
A FA I+AI L+ +W L ++IR+G ++ ITD + AVS I+ PDP+LAD I
Sbjct: 209 SATFAHALIKAINALQIYWKELSSNIRSGHVSE-WITDLDCKNAVSAILGGPDPELADVI 267
Query: 185 EAECSKRSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDHYSNGLPLVCTMYASSECYFG 244
E ECS +SW+GIITRLWP K+++ IVTG M+QYIP LD YSN LP+V +Y SSE FG
Sbjct: 268 EQECSHKSWEGIITRLWPKAKFIECIVTGQMAQYIPTLDFYSNKLPIVSMVYGSSESIFG 327
Query: 245 VNLNPLCKPSEVSYTLIPTMCYFEFLPVNRTNGVTDSIQTPRSLNEKEQQELVELVDVKL 304
VN++PL KP +VSYT +P + YFEFLP++ +E++ +V+LV VKL
Sbjct: 328 VNVDPLSKPQDVSYTFLPNISYFEFLPID---------------HEEDMNTIVDLVGVKL 372
Query: 305 GEEYELVVTTYAGKNKFL 322
G YE VVT+Y G +++L
Sbjct: 373 GCYYETVVTSYFGLHRYL 390
>AT5G51470.1 | Symbols: | Auxin-responsive GH3 family protein |
chr5:20907287-20909340 FORWARD LENGTH=581
Length = 581
Score = 272 bits (695), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 139/320 (43%), Positives = 203/320 (63%), Gaps = 18/320 (5%)
Query: 3 LFFSSGTSGGERKLMPTIEDELGRRTLLYSLLMPVMSQFVPDLEKGKGMYLLFIKSEAKT 62
SSGTSGG++K+ P L ++ V+S+ + LE GKGM F SE T
Sbjct: 93 FLLSSGTSGGKQKMFPRNNKYLENIKFIFYYRSLVISKHIDGLEHGKGMVFNFCTSENTT 152
Query: 63 PGGIVARPVLTSYYKSSHFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEV 122
P G+ + TS++KS +F++RP + +YTSP+E +LC D+ Q++Y LLCGL Q +V
Sbjct: 153 PSGLPSSAASTSFFKSDYFKNRPSYWHWSYTSPDEVILCSDTKQTLYCHLLCGLVQRDDV 212
Query: 123 FRVGAVFASGFIRAIRFLEKHWPLLCNDIRTGTINPTIITDASVREAVSKIV-KPDPKLA 181
+VGA F + +RAI LE W +C +IR G ++ ITD S R++VSKI+ +P+P+LA
Sbjct: 213 VKVGAAFVTILVRAINLLENSWKEICTNIRFGHLSE-WITDISCRDSVSKILGEPNPELA 271
Query: 182 DFIEAECSKRSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDHYSNGLPLVCTMYASSEC 241
D IE EC+ +SW+GI+ RLWP K+++ I TG M+Q+IP L+ YSN LP + + Y SSE
Sbjct: 272 DLIENECNNKSWEGIVPRLWPKAKFIECIATGQMAQHIPTLEFYSNKLPSISSSYVSSET 331
Query: 242 YFGVNLNPLCKPSEVSYTLIPTMCYFEFLPVNRTNGVTDSIQTPRSLNEKEQQELVELVD 301
FG+N++PLCKP VSYT +P + YFEFL V + ++ E+V+LVD
Sbjct: 332 MFGINMSPLCKPENVSYTFLPNLSYFEFLLV----------------DAGDKTEIVDLVD 375
Query: 302 VKLGEEYELVVTTYAGKNKF 321
VKLG YE +VT ++G +++
Sbjct: 376 VKLGCYYEPLVTNHSGLHRY 395
>AT5G13380.1 | Symbols: | Auxin-responsive GH3 family protein |
chr5:4289912-4292355 FORWARD LENGTH=624
Length = 624
Score = 262 bits (669), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 140/322 (43%), Positives = 203/322 (63%), Gaps = 21/322 (6%)
Query: 2 ILFFSSGTSGGERKLMPTIEDELGRRTLLYSLLMPVMSQFVPDLEKGKGMYLLFIKSEAK 61
+L ++GTSGG KL+P +EL +R L L +P++ + + L +GK + F+ E++
Sbjct: 123 LLLATTGTSGGIPKLIPLTAEELEQRILFGFLYVPLVFKHIEGLTQGKSLMFYFVTRESE 182
Query: 62 TPGGIVARPVLTSYYKS-----SHFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGL 116
T G++ R ++T KS S DR SP+ +C D+ Q MY QLLCGL
Sbjct: 183 TVSGLMVRFMITCVLKSVNPTNSFLWDRVQ------ISPHAIAICEDTNQGMYCQLLCGL 236
Query: 117 CQNKEVFRVGAVFASGFIRAIRFLEKHWPLLCNDIRTGTINPTIITDASVREAVSK-IVK 175
Q + V R+GA +AS F++ I+FLE HWP LC++IRTG ++ ITDA + +
Sbjct: 237 LQREHVARLGAPYASSFLKVIKFLEDHWPELCSNIRTGRLS-DWITDAQCVSGIGNFLTA 295
Query: 176 PDPKLADFIEAECSKRSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDHYSNGLPLVCTM 235
PDP LA+ IE ECSK SW+ I++R+WP K ++ ++TGTM+QYIP+L+ Y GLPLV +
Sbjct: 296 PDPDLANLIEQECSKTSWEAILSRIWPKAKCIEAVITGTMAQYIPLLEFYGGGLPLVSSW 355
Query: 236 YASSECYFGVNLNPLCKPSEVSYTLIPTMCYFEFLPVNRTNGVTDSIQTPRSLNEKEQQE 295
Y SSEC+ G+NLNPL KPS+VSYT+IP+M YFEF+ V + +
Sbjct: 356 YGSSECFIGINLNPLSKPSDVSYTIIPSMGYFEFIEVVKDRQEAGHVPA--------DPV 407
Query: 296 LVELVDVKLGEEYELVVTTYAG 317
+V+LVDVK+G +YEL+VTT++G
Sbjct: 408 VVDLVDVKIGHDYELLVTTFSG 429
>AT1G48670.1 | Symbols: | auxin-responsive GH3 family protein |
chr1:17998946-18001200 REVERSE LENGTH=525
Length = 525
Score = 218 bits (556), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 134/321 (41%), Positives = 173/321 (53%), Gaps = 73/321 (22%)
Query: 6 SSGTSGGERKLMPTIE---DELGRRTLLYSLLMPVMSQFVPDLEKGKGMYLLFIKSEAKT 62
S+GTSGG++K+ P + ++LG L SL M F E+GK M K + T
Sbjct: 91 STGTSGGKQKVFPVNDKYIEKLGYVIALRSLAMS--KHFDSGGEQGKAMEFHCTKPPSAT 148
Query: 63 PGGIVARPVLTSYYKSSHFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEV 122
P G+ P D EV
Sbjct: 149 PSGL------------------PRD---------------------------------EV 157
Query: 123 FRVGAVFASGFIRAIRFLEKHWPLLCNDIRTGTINPTIITDASVREAVSKIVK-PDPKLA 181
RVGA FA +RAI FLEKHW LC++IR+G ++ ITD R AVS I++ PD LA
Sbjct: 158 VRVGAAFAFVLVRAIDFLEKHWKELCSNIRSGHVS-EWITDLEGRNAVSTILRGPDSILA 216
Query: 182 DFIEAECSKRSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDHYSNGLPLVCTMYASSEC 241
D IE ECS +SW+GIITRLWP KY+D I+TG MSQYIP+L+ YSN LP+V T Y SSE
Sbjct: 217 DVIEQECSHKSWEGIITRLWPKAKYIDCIITGQMSQYIPMLEFYSNKLPIVSTTYGSSES 276
Query: 242 YFGVNLNPLCKPSEVSYTLIPTMCYFEFLPVNRTNGVTDSIQTPRSLNEKEQQELVELVD 301
FG+N++PLCKP + SYT P + YFEFLPV+ ++ + +V+LVD
Sbjct: 277 TFGMNVDPLCKPQDTSYTCAPNISYFEFLPVD---------------HKGDMASIVDLVD 321
Query: 302 VKLGEEYELVVTTYAGKNKFL 322
VKLG YE VVT Y G +++L
Sbjct: 322 VKLGCYYEPVVTNYFGLHRYL 342
>AT2G46370.4 | Symbols: JAR1 | Auxin-responsive GH3 family protein |
chr2:19034233-19036369 FORWARD LENGTH=586
Length = 586
Score = 198 bits (504), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/315 (36%), Positives = 173/315 (54%), Gaps = 18/315 (5%)
Query: 5 FSSGTSGGERKLMPTIEDELGRRTL-LYSLLMPVMSQFVPDLEKGKGMYLLFIKSEAKTP 63
SSGTS G K +P DEL TL L+ ++ P + GK + +F + +
Sbjct: 110 LSSGTSQGRPKFIP-FTDELMENTLQLFRTAFAFRNRDFPIDDNGKALQFIFSSKQYIST 168
Query: 64 GGIVARPVLTSYYKSSHFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEVF 123
GG+ T+ Y++ +F+ + SP+E + PD +Q++Y LL G+ +V
Sbjct: 169 GGVPVGTATTNVYRNPNFKAGMKSITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQ 228
Query: 124 RVGAVFASGFIRAIRFLEKHWPLLCNDIRTGTINPTIITDASVREAVSKIVKPDPKLADF 183
V AVFA G + A R E+ W + DI+ G ++ IT SVR A+SK++ P+P+LA+
Sbjct: 229 YVFAVFAHGLVHAFRTFEQVWEEIVTDIKDGVLS-NRITVPSVRTAMSKLLTPNPELAET 287
Query: 184 IEAEC-SKRSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDHYSNGLPLVCTMYASSECY 242
I +C S +W G+I L+PN KYV I+TG+M Y+P L HY+ LPLV Y SSE +
Sbjct: 288 IRTKCMSLSNWYGLIPALFPNAKYVYGIMTGSMEPYVPKLRHYAGDLPLVSHDYGSSEGW 347
Query: 243 FGVNLNPLCKPSEVSYTLIPTMCYFEFLPVNRTNGVTDSIQTPRSLNEKEQQELVELVDV 302
N+ P P E ++ +IP + YFEFLPV+ T + +++ V L V
Sbjct: 348 IAANVTPRLSPEEATFAVIPNLGYFEFLPVSETG--------------EGEEKPVGLTQV 393
Query: 303 KLGEEYELVVTTYAG 317
K+GEEYE+V+T YAG
Sbjct: 394 KIGEEYEVVITNYAG 408
>AT2G46370.2 | Symbols: JAR1, FIN219 | Auxin-responsive GH3 family
protein | chr2:19034342-19036369 FORWARD LENGTH=575
Length = 575
Score = 198 bits (504), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 116/315 (36%), Positives = 173/315 (54%), Gaps = 18/315 (5%)
Query: 5 FSSGTSGGERKLMPTIEDELGRRTL-LYSLLMPVMSQFVPDLEKGKGMYLLFIKSEAKTP 63
SSGTS G K +P DEL TL L+ ++ P + GK + +F + +
Sbjct: 99 LSSGTSQGRPKFIP-FTDELMENTLQLFRTAFAFRNRDFPIDDNGKALQFIFSSKQYIST 157
Query: 64 GGIVARPVLTSYYKSSHFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEVF 123
GG+ T+ Y++ +F+ + SP+E + PD +Q++Y LL G+ +V
Sbjct: 158 GGVPVGTATTNVYRNPNFKAGMKSITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQ 217
Query: 124 RVGAVFASGFIRAIRFLEKHWPLLCNDIRTGTINPTIITDASVREAVSKIVKPDPKLADF 183
V AVFA G + A R E+ W + DI+ G ++ IT SVR A+SK++ P+P+LA+
Sbjct: 218 YVFAVFAHGLVHAFRTFEQVWEEIVTDIKDGVLS-NRITVPSVRTAMSKLLTPNPELAET 276
Query: 184 IEAEC-SKRSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDHYSNGLPLVCTMYASSECY 242
I +C S +W G+I L+PN KYV I+TG+M Y+P L HY+ LPLV Y SSE +
Sbjct: 277 IRTKCMSLSNWYGLIPALFPNAKYVYGIMTGSMEPYVPKLRHYAGDLPLVSHDYGSSEGW 336
Query: 243 FGVNLNPLCKPSEVSYTLIPTMCYFEFLPVNRTNGVTDSIQTPRSLNEKEQQELVELVDV 302
N+ P P E ++ +IP + YFEFLPV+ T + +++ V L V
Sbjct: 337 IAANVTPRLSPEEATFAVIPNLGYFEFLPVSETG--------------EGEEKPVGLTQV 382
Query: 303 KLGEEYELVVTTYAG 317
K+GEEYE+V+T YAG
Sbjct: 383 KIGEEYEVVITNYAG 397
>AT2G46370.1 | Symbols: JAR1, FIN219 | Auxin-responsive GH3 family
protein | chr2:19034342-19036369 FORWARD LENGTH=575
Length = 575
Score = 198 bits (504), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 116/315 (36%), Positives = 173/315 (54%), Gaps = 18/315 (5%)
Query: 5 FSSGTSGGERKLMPTIEDELGRRTL-LYSLLMPVMSQFVPDLEKGKGMYLLFIKSEAKTP 63
SSGTS G K +P DEL TL L+ ++ P + GK + +F + +
Sbjct: 99 LSSGTSQGRPKFIP-FTDELMENTLQLFRTAFAFRNRDFPIDDNGKALQFIFSSKQYIST 157
Query: 64 GGIVARPVLTSYYKSSHFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEVF 123
GG+ T+ Y++ +F+ + SP+E + PD +Q++Y LL G+ +V
Sbjct: 158 GGVPVGTATTNVYRNPNFKAGMKSITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQ 217
Query: 124 RVGAVFASGFIRAIRFLEKHWPLLCNDIRTGTINPTIITDASVREAVSKIVKPDPKLADF 183
V AVFA G + A R E+ W + DI+ G ++ IT SVR A+SK++ P+P+LA+
Sbjct: 218 YVFAVFAHGLVHAFRTFEQVWEEIVTDIKDGVLS-NRITVPSVRTAMSKLLTPNPELAET 276
Query: 184 IEAEC-SKRSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDHYSNGLPLVCTMYASSECY 242
I +C S +W G+I L+PN KYV I+TG+M Y+P L HY+ LPLV Y SSE +
Sbjct: 277 IRTKCMSLSNWYGLIPALFPNAKYVYGIMTGSMEPYVPKLRHYAGDLPLVSHDYGSSEGW 336
Query: 243 FGVNLNPLCKPSEVSYTLIPTMCYFEFLPVNRTNGVTDSIQTPRSLNEKEQQELVELVDV 302
N+ P P E ++ +IP + YFEFLPV+ T + +++ V L V
Sbjct: 337 IAANVTPRLSPEEATFAVIPNLGYFEFLPVSETG--------------EGEEKPVGLTQV 382
Query: 303 KLGEEYELVVTTYAG 317
K+GEEYE+V+T YAG
Sbjct: 383 KIGEEYEVVITNYAG 397
>AT2G46370.3 | Symbols: JAR1, FIN219 | Auxin-responsive GH3 family
protein | chr2:19034579-19036369 FORWARD LENGTH=496
Length = 496
Score = 198 bits (504), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 116/315 (36%), Positives = 173/315 (54%), Gaps = 18/315 (5%)
Query: 5 FSSGTSGGERKLMPTIEDELGRRTL-LYSLLMPVMSQFVPDLEKGKGMYLLFIKSEAKTP 63
SSGTS G K +P DEL TL L+ ++ P + GK + +F + +
Sbjct: 20 LSSGTSQGRPKFIP-FTDELMENTLQLFRTAFAFRNRDFPIDDNGKALQFIFSSKQYIST 78
Query: 64 GGIVARPVLTSYYKSSHFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEVF 123
GG+ T+ Y++ +F+ + SP+E + PD +Q++Y LL G+ +V
Sbjct: 79 GGVPVGTATTNVYRNPNFKAGMKSITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQ 138
Query: 124 RVGAVFASGFIRAIRFLEKHWPLLCNDIRTGTINPTIITDASVREAVSKIVKPDPKLADF 183
V AVFA G + A R E+ W + DI+ G ++ IT SVR A+SK++ P+P+LA+
Sbjct: 139 YVFAVFAHGLVHAFRTFEQVWEEIVTDIKDGVLS-NRITVPSVRTAMSKLLTPNPELAET 197
Query: 184 IEAEC-SKRSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDHYSNGLPLVCTMYASSECY 242
I +C S +W G+I L+PN KYV I+TG+M Y+P L HY+ LPLV Y SSE +
Sbjct: 198 IRTKCMSLSNWYGLIPALFPNAKYVYGIMTGSMEPYVPKLRHYAGDLPLVSHDYGSSEGW 257
Query: 243 FGVNLNPLCKPSEVSYTLIPTMCYFEFLPVNRTNGVTDSIQTPRSLNEKEQQELVELVDV 302
N+ P P E ++ +IP + YFEFLPV+ T + +++ V L V
Sbjct: 258 IAANVTPRLSPEEATFAVIPNLGYFEFLPVSETG--------------EGEEKPVGLTQV 303
Query: 303 KLGEEYELVVTTYAG 317
K+GEEYE+V+T YAG
Sbjct: 304 KIGEEYEVVITNYAG 318
>AT4G03400.1 | Symbols: DFL2, GH3-10 | Auxin-responsive GH3 family
protein | chr4:1497675-1499729 REVERSE LENGTH=591
Length = 591
Score = 198 bits (504), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 113/324 (34%), Positives = 174/324 (53%), Gaps = 9/324 (2%)
Query: 2 ILFFSSGTSGGERKLMPTIEDELGRRTLLYSLLMPVMSQFVPDLEKGKGMYLLFIKSEAK 61
+L SSGT+ G +K +P ++ L S+F P E G+ + ++ E K
Sbjct: 99 VLSLSSGTTEGRQKYVPFTRHSAQTTLQIFRLSAAYRSRFYPIREGGRILEFIYAGKEFK 158
Query: 62 TPGGIVARPVLTSYYKSSHFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKE 121
T GG+ T YY S F+ + + SP E + D Q Y LL GL + +
Sbjct: 159 TLGGLTVGTATTHYYASEEFKTKQETTKSFTCSPQEVISGGDFGQCTYCHLLLGLHYSSQ 218
Query: 122 VFRVGAVFASGFIRAIRFLEKHWPLLCNDIRTGTINPTIITDASVREAVSKIVKPDPKLA 181
V V + F+ ++A F E+ W +C DI+ G ++ + IT +R+AV +++P+P LA
Sbjct: 219 VEFVASAFSYTIVQAFSFFEEIWREICADIKEGNLS-SRITLPKMRKAVLALIRPNPSLA 277
Query: 182 DFIEAEC----SKRSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDHYSNGLPLVCTMYA 237
IE C + W G+I++LWPN K++ I+TG+M Y+ L HY+ GLPLV Y
Sbjct: 278 SHIEEICLELETNLGWFGLISKLWPNAKFISSIMTGSMLPYLNKLRHYAGGLPLVSADYG 337
Query: 238 SSECYFGVNLNPLCKPSEVSYTLIPTMCYFEFLPVNRTNGVTDSIQTPRSLNEKEQQELV 297
S+E + GVN++P P +VS+ +IPT YFEF+P+ R +D + +K V
Sbjct: 338 STESWIGVNVDPHLPPEDVSFAVIPTFSYFEFIPLYRRQNQSDICIDGDFVEDKP----V 393
Query: 298 ELVDVKLGEEYELVVTTYAGKNKF 321
L VKLG+EYELV+TT+ G ++
Sbjct: 394 PLSQVKLGQEYELVLTTFTGLYRY 417
>AT1G48690.1 | Symbols: | Auxin-responsive GH3 family protein |
chr1:18009105-18009878 REVERSE LENGTH=190
Length = 190
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 3 LFFSSGTSGGERKLMPTIEDELGRRTLLYSLLMPVMSQFVPDLEKGKGMYLLFIKSEAKT 62
F SSGTSGG++K+ P +++L +S+++ + +GK M L + +KT
Sbjct: 87 FFLSSGTSGGKQKIFPVNNKYFENMIFIHALCSSTISKYIDGIGEGKVMAFLNTRPFSKT 146
Query: 63 PGGIVARPVLTSYYKSSHFRDRPYDPYTNYTSPNETVLCPDSYQSMY 109
P G+ P+ TS+ S +F++RP Y SP+E +LC D+ Q+MY
Sbjct: 147 PSGLPVAPLSTSFAMSDYFKNRPSKC---YISPDEVILCVDNRQNMY 190