Miyakogusa Predicted Gene

Lj0g3v0253389.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0253389.2 Non Chatacterized Hit- tr|I1NJ95|I1NJ95_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49713
PE,42.4,0.000000000000005,seg,NULL,CUFF.16629.2
         (115 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G55020.1 | Symbols:  | Ypt/Rab-GAP domain of gyp1p superfamil...    74   2e-14
AT2G37290.2 | Symbols:  | Ypt/Rab-GAP domain of gyp1p superfamil...    70   3e-13
AT2G37290.1 | Symbols:  | Ypt/Rab-GAP domain of gyp1p superfamil...    70   3e-13
AT2G39280.1 | Symbols:  | Ypt/Rab-GAP domain of gyp1p superfamil...    64   2e-11
AT2G39280.2 | Symbols:  | Ypt/Rab-GAP domain of gyp1p superfamil...    62   8e-11

>AT3G55020.1 | Symbols:  | Ypt/Rab-GAP domain of gyp1p superfamily
          protein | chr3:20389278-20394713 REVERSE LENGTH=777
          Length = 777

 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/65 (60%), Positives = 45/65 (69%), Gaps = 4/65 (6%)

Query: 6  NLLHNFEPKRDSYGFALRPQYAQRYREYALIYKEEEDERSDKWRSFLNQVAK----PTQP 61
          N L  FE KRD+YGF +RPQ+ QRYREYA IYKEEE+ERSD+W SFL    +    PT  
Sbjct: 19 NPLVAFEHKRDAYGFPVRPQHVQRYREYADIYKEEEEERSDRWSSFLEDHVESTELPTNG 78

Query: 62 SSPEI 66
          SS  I
Sbjct: 79 SSENI 83


>AT2G37290.2 | Symbols:  | Ypt/Rab-GAP domain of gyp1p superfamily
          protein | chr2:15656935-15661335 REVERSE LENGTH=916
          Length = 916

 Score = 69.7 bits (169), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 33/69 (47%), Positives = 50/69 (72%), Gaps = 1/69 (1%)

Query: 15 RDSYGFALRPQYAQRYREYALIYKEEEDERSDKWRSFLN-QVAKPTQPSSPEIKYTETLK 73
          RD+YGFALRPQ+ QRY+EY  IY EEE ER++KW++FL+ Q  +  +P S + ++ +T +
Sbjct: 16 RDAYGFALRPQHVQRYQEYLSIYTEEETERAEKWKNFLDRQEDRTAEPCSSDEEFQDTFQ 75

Query: 74 AESNEVKEE 82
          A+  E  E+
Sbjct: 76 ADGLESGED 84


>AT2G37290.1 | Symbols:  | Ypt/Rab-GAP domain of gyp1p superfamily
          protein | chr2:15656935-15661335 REVERSE LENGTH=882
          Length = 882

 Score = 69.7 bits (169), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 33/69 (47%), Positives = 50/69 (72%), Gaps = 1/69 (1%)

Query: 15 RDSYGFALRPQYAQRYREYALIYKEEEDERSDKWRSFLN-QVAKPTQPSSPEIKYTETLK 73
          RD+YGFALRPQ+ QRY+EY  IY EEE ER++KW++FL+ Q  +  +P S + ++ +T +
Sbjct: 16 RDAYGFALRPQHVQRYQEYLSIYTEEETERAEKWKNFLDRQEDRTAEPCSSDEEFQDTFQ 75

Query: 74 AESNEVKEE 82
          A+  E  E+
Sbjct: 76 ADGLESGED 84


>AT2G39280.1 | Symbols:  | Ypt/Rab-GAP domain of gyp1p superfamily
          protein | chr2:16402001-16406650 REVERSE LENGTH=749
          Length = 749

 Score = 63.5 bits (153), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 1/69 (1%)

Query: 14 KRDSYGFALRPQYAQRYREYALIYKEEEDERSDKWRSFLN-QVAKPTQPSSPEIKYTETL 72
          KRD+YGF++RPQ+ QRYREY  IYKEEE ERS +W +FL         P++   + T   
Sbjct: 12 KRDAYGFSVRPQHVQRYREYVNIYKEEEVERSARWSNFLEFHAESGVSPTNGSSENTHVN 71

Query: 73 KAESNEVKE 81
           +ES++ KE
Sbjct: 72 PSESDKKKE 80


>AT2G39280.2 | Symbols:  | Ypt/Rab-GAP domain of gyp1p superfamily
           protein | chr2:16402001-16406650 REVERSE LENGTH=772
          Length = 772

 Score = 62.0 bits (149), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 1/68 (1%)

Query: 15  RDSYGFALRPQYAQRYREYALIYKEEEDERSDKWRSFLN-QVAKPTQPSSPEIKYTETLK 73
           RD+YGF++RPQ+ QRYREY  IYKEEE ERS +W +FL         P++   + T    
Sbjct: 41  RDAYGFSVRPQHVQRYREYVNIYKEEEVERSARWSNFLEFHAESGVSPTNGSSENTHVNP 100

Query: 74  AESNEVKE 81
           +ES++ KE
Sbjct: 101 SESDKKKE 108