Miyakogusa Predicted Gene

Lj0g3v0253379.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0253379.1 Non Chatacterized Hit- tr|K4ARJ2|K4ARJ2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,97.73,0.000000000000001,coiled-coil,NULL;
seg,NULL,gene.g19775.t1.1
         (168 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G37290.2 | Symbols:  | Ypt/Rab-GAP domain of gyp1p superfamil...   173   5e-44
AT2G37290.1 | Symbols:  | Ypt/Rab-GAP domain of gyp1p superfamil...   173   6e-44
AT3G55020.1 | Symbols:  | Ypt/Rab-GAP domain of gyp1p superfamil...   134   3e-32
AT2G39280.2 | Symbols:  | Ypt/Rab-GAP domain of gyp1p superfamil...   132   9e-32
AT2G39280.1 | Symbols:  | Ypt/Rab-GAP domain of gyp1p superfamil...   132   1e-31

>AT2G37290.2 | Symbols:  | Ypt/Rab-GAP domain of gyp1p superfamily
           protein | chr2:15656935-15661335 REVERSE LENGTH=916
          Length = 916

 Score =  173 bits (439), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 96/174 (55%), Positives = 119/174 (68%), Gaps = 11/174 (6%)

Query: 1   MEMVKEDNRLQLSARXXXXXXXXXXXXXXXXDKKEQEAAMLQVLMRLEQDQKVTEDARRR 60
           MEMVKEDNRL+LSAR                DKKEQE AMLQVLM++EQDQK+TEDAR  
Sbjct: 726 MEMVKEDNRLELSARIEQLERDVRELKQVLSDKKEQETAMLQVLMKVEQDQKLTEDARIN 785

Query: 61  AEHELAAQKYEVHVLQDKYEKAMASIAEMQKRVVMAESMLEATLSYESGQSKAL-SSPRA 119
           AE + AAQ+Y VHVLQ+K EK +  +A+M+K++V AE+ LEATL YESGQ+KAL SSPR 
Sbjct: 786 AEQDAAAQRYAVHVLQEKNEKLVTQLAQMEKKLVTAETTLEATLQYESGQNKALSSSPRF 845

Query: 120 ------GPSRKIGLLSFGLGWRDRNKGK----PNAEESNESLPDSVTPRKESNN 163
                  P +K G LSFGLGWRDRNK K     N + ++ +  ++ +P KES N
Sbjct: 846 TRTTTESPKKKTGFLSFGLGWRDRNKAKQTEESNVDNTSNAASEAKSPSKESVN 899


>AT2G37290.1 | Symbols:  | Ypt/Rab-GAP domain of gyp1p superfamily
           protein | chr2:15656935-15661335 REVERSE LENGTH=882
          Length = 882

 Score =  173 bits (438), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 96/174 (55%), Positives = 119/174 (68%), Gaps = 11/174 (6%)

Query: 1   MEMVKEDNRLQLSARXXXXXXXXXXXXXXXXDKKEQEAAMLQVLMRLEQDQKVTEDARRR 60
           MEMVKEDNRL+LSAR                DKKEQE AMLQVLM++EQDQK+TEDAR  
Sbjct: 692 MEMVKEDNRLELSARIEQLERDVRELKQVLSDKKEQETAMLQVLMKVEQDQKLTEDARIN 751

Query: 61  AEHELAAQKYEVHVLQDKYEKAMASIAEMQKRVVMAESMLEATLSYESGQSKAL-SSPRA 119
           AE + AAQ+Y VHVLQ+K EK +  +A+M+K++V AE+ LEATL YESGQ+KAL SSPR 
Sbjct: 752 AEQDAAAQRYAVHVLQEKNEKLVTQLAQMEKKLVTAETTLEATLQYESGQNKALSSSPRF 811

Query: 120 ------GPSRKIGLLSFGLGWRDRNKGK----PNAEESNESLPDSVTPRKESNN 163
                  P +K G LSFGLGWRDRNK K     N + ++ +  ++ +P KES N
Sbjct: 812 TRTTTESPKKKTGFLSFGLGWRDRNKAKQTEESNVDNTSNAASEAKSPSKESVN 865


>AT3G55020.1 | Symbols:  | Ypt/Rab-GAP domain of gyp1p superfamily
           protein | chr3:20389278-20394713 REVERSE LENGTH=777
          Length = 777

 Score =  134 bits (337), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 73/119 (61%), Positives = 87/119 (73%)

Query: 1   MEMVKEDNRLQLSARXXXXXXXXXXXXXXXXDKKEQEAAMLQVLMRLEQDQKVTEDARRR 60
           ME+VKEDNR QLSA+                DK+EQE AMLQVLMR+EQ+QKVTEDAR  
Sbjct: 634 MEIVKEDNRRQLSAKVEQLEQEMAEVQRLLSDKQEQEGAMLQVLMRVEQEQKVTEDARIF 693

Query: 61  AEHELAAQKYEVHVLQDKYEKAMASIAEMQKRVVMAESMLEATLSYESGQSKALSSPRA 119
           AE +  AQ+Y   VLQ+KYE+A+A++AEM+KR VMAESMLEATL Y+SGQ KA  SPR 
Sbjct: 694 AEQDAEAQRYAAQVLQEKYEEAVAALAEMEKRAVMAESMLEATLQYQSGQLKAQPSPRT 752


>AT2G39280.2 | Symbols:  | Ypt/Rab-GAP domain of gyp1p superfamily
           protein | chr2:16402001-16406650 REVERSE LENGTH=772
          Length = 772

 Score =  132 bits (333), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 70/118 (59%), Positives = 87/118 (73%)

Query: 1   MEMVKEDNRLQLSARXXXXXXXXXXXXXXXXDKKEQEAAMLQVLMRLEQDQKVTEDARRR 60
           MEMVK+DNR QL A+                DK+EQE+AM+QVLMR+EQ+ KVTEDARR 
Sbjct: 643 MEMVKQDNRRQLKAKIEQLEQGVTELRRLVSDKREQESAMIQVLMRMEQEHKVTEDARRL 702

Query: 61  AEHELAAQKYEVHVLQDKYEKAMASIAEMQKRVVMAESMLEATLSYESGQSKALSSPR 118
           AE + A Q+Y   VLQ+KYE+A+A++AEM++R VMAESMLEATL Y+SGQ KA  SPR
Sbjct: 703 AEQDAATQRYAAEVLQEKYEEAVAALAEMEERAVMAESMLEATLQYQSGQVKAQPSPR 760


>AT2G39280.1 | Symbols:  | Ypt/Rab-GAP domain of gyp1p superfamily
           protein | chr2:16402001-16406650 REVERSE LENGTH=749
          Length = 749

 Score =  132 bits (332), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 70/118 (59%), Positives = 87/118 (73%)

Query: 1   MEMVKEDNRLQLSARXXXXXXXXXXXXXXXXDKKEQEAAMLQVLMRLEQDQKVTEDARRR 60
           MEMVK+DNR QL A+                DK+EQE+AM+QVLMR+EQ+ KVTEDARR 
Sbjct: 620 MEMVKQDNRRQLKAKIEQLEQGVTELRRLVSDKREQESAMIQVLMRMEQEHKVTEDARRL 679

Query: 61  AEHELAAQKYEVHVLQDKYEKAMASIAEMQKRVVMAESMLEATLSYESGQSKALSSPR 118
           AE + A Q+Y   VLQ+KYE+A+A++AEM++R VMAESMLEATL Y+SGQ KA  SPR
Sbjct: 680 AEQDAATQRYAAEVLQEKYEEAVAALAEMEERAVMAESMLEATLQYQSGQVKAQPSPR 737