Miyakogusa Predicted Gene
- Lj0g3v0253109.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0253109.1 Non Chatacterized Hit- tr|I1K6T2|I1K6T2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51850
PE,81.54,0,Prokaryotic type KH domain (KH-domain type II),K Homology,
prokaryotic type; no description,K homolo,gene.g19755.t1.1
(224 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 149 1e-36
AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 149 1e-36
AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 149 1e-36
AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 | chr5:249... 149 2e-36
AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 126 1e-29
AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 126 1e-29
AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 126 1e-29
AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 126 1e-29
AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 122 3e-28
AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 122 3e-28
AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 | chr3:2... 118 3e-27
AT2G31610.1 | Symbols: | Ribosomal protein S3 family protein | ... 113 8e-26
AT3G53870.1 | Symbols: | Ribosomal protein S3 family protein | ... 113 1e-25
AT5G35530.1 | Symbols: | Ribosomal protein S3 family protein | ... 112 3e-25
AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 110 1e-24
AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 110 1e-24
AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 | ... 105 2e-23
AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 | chr5:146... 105 3e-23
AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 99 2e-21
AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 98 5e-21
AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 | chr5:243... 96 2e-20
AT1G34170.1 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 96 2e-20
AT1G34170.2 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 96 2e-20
AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 95 3e-20
AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 | chr1:1... 94 7e-20
AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 | chr1:1... 92 2e-19
AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 | chr1:1... 92 3e-19
AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 | chr1:1... 92 4e-19
AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 | chr1:1... 91 5e-19
AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 91 7e-19
AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 91 7e-19
AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23... 91 8e-19
AT1G43950.1 | Symbols: ARF23 | auxin response factor 23 | chr1:1... 90 1e-18
AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 | chr1:1... 90 1e-18
AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor ... 90 1e-18
AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 fam... 90 1e-18
AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response fact... 81 5e-16
AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 | chr2:1... 76 2e-14
AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 | chr4:1... 71 5e-13
AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 | chr1:2... 57 1e-08
>AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 67/83 (80%), Positives = 72/83 (86%)
Query: 47 DAETALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVYDLPPKI 106
D E ALYRELWHACAGPLVTVPR+ +RVFYFPQGHIEQVEASTNQ AE MP+YDLP K+
Sbjct: 53 DPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKL 112
Query: 107 LCRVINVMLKAEPDTDEVFAQFV 129
LCRVINV LKAE DTDEV+AQ
Sbjct: 113 LCRVINVDLKAEADTDEVYAQIT 135
>AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 67/83 (80%), Positives = 72/83 (86%)
Query: 47 DAETALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVYDLPPKI 106
D E ALYRELWHACAGPLVTVPR+ +RVFYFPQGHIEQVEASTNQ AE MP+YDLP K+
Sbjct: 53 DPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKL 112
Query: 107 LCRVINVMLKAEPDTDEVFAQFV 129
LCRVINV LKAE DTDEV+AQ
Sbjct: 113 LCRVINVDLKAEADTDEVYAQIT 135
>AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 67/83 (80%), Positives = 72/83 (86%)
Query: 47 DAETALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVYDLPPKI 106
D E ALYRELWHACAGPLVTVPR+ +RVFYFPQGHIEQVEASTNQ AE MP+YDLP K+
Sbjct: 53 DPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKL 112
Query: 107 LCRVINVMLKAEPDTDEVFAQFV 129
LCRVINV LKAE DTDEV+AQ
Sbjct: 113 LCRVINVDLKAEADTDEVYAQIT 135
>AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 |
chr5:24910859-24914873 FORWARD LENGTH=853
Length = 853
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 67/83 (80%), Positives = 72/83 (86%)
Query: 47 DAETALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVYDLPPKI 106
D E ALYRELWHACAGPLVTVPR+ +RVFYFPQGHIEQVEASTNQ AE MP+YDLP K+
Sbjct: 53 DPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKL 112
Query: 107 LCRVINVMLKAEPDTDEVFAQFV 129
LCRVINV LKAE DTDEV+AQ
Sbjct: 113 LCRVINVDLKAEADTDEVYAQIT 135
>AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=660
Length = 660
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 67/79 (84%)
Query: 51 ALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVYDLPPKILCRV 110
AL RELWHACAGPLVT+PREGERV+YFP+GH+EQ+EAS +Q E MP ++LP KILC+V
Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKV 77
Query: 111 INVMLKAEPDTDEVFAQFV 129
IN+ +AEP+TDEV+AQ
Sbjct: 78 INIQRRAEPETDEVYAQIT 96
>AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 67/79 (84%)
Query: 51 ALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVYDLPPKILCRV 110
AL RELWHACAGPLVT+PREGERV+YFP+GH+EQ+EAS +Q E MP ++LP KILC+V
Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKV 77
Query: 111 INVMLKAEPDTDEVFAQFV 129
IN+ +AEP+TDEV+AQ
Sbjct: 78 INIQRRAEPETDEVYAQIT 96
>AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=662
Length = 662
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 67/79 (84%)
Query: 51 ALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVYDLPPKILCRV 110
AL RELWHACAGPLVT+PREGERV+YFP+GH+EQ+EAS +Q E MP ++LP KILC+V
Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKV 77
Query: 111 INVMLKAEPDTDEVFAQFV 129
IN+ +AEP+TDEV+AQ
Sbjct: 78 INIQRRAEPETDEVYAQIT 96
>AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 67/79 (84%)
Query: 51 ALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVYDLPPKILCRV 110
AL RELWHACAGPLVT+PREGERV+YFP+GH+EQ+EAS +Q E MP ++LP KILC+V
Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKV 77
Query: 111 INVMLKAEPDTDEVFAQFV 129
IN+ +AEP+TDEV+AQ
Sbjct: 78 INIQRRAEPETDEVYAQIT 96
>AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 |
chr2:19104993-19108029 FORWARD LENGTH=601
Length = 601
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 52 LYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQ-VAELHMPVYDLPPKILCRV 110
LY ELW ACAGPLV VPR GERVFYFPQGH+EQ+ ASTNQ V + +PV++LPPKILCRV
Sbjct: 18 LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPPKILCRV 77
Query: 111 INVMLKAEPDTDEVFAQFV 129
++V LKAE +TDEV+AQ
Sbjct: 78 LSVTLKAEHETDEVYAQIT 96
>AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105112-19108029 FORWARD LENGTH=622
Length = 622
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/78 (71%), Positives = 66/78 (84%), Gaps = 1/78 (1%)
Query: 52 LYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQ-VAELHMPVYDLPPKILCRV 110
LY ELW ACAGPLV VPR GERVFYFPQGH+EQ+ ASTNQ V + +PV++LPPKILCRV
Sbjct: 39 LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPPKILCRV 98
Query: 111 INVMLKAEPDTDEVFAQF 128
++V LKAE +TDEV+AQ
Sbjct: 99 LSVTLKAEHETDEVYAQI 116
>AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 |
chr3:22888171-22891179 FORWARD LENGTH=602
Length = 602
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Query: 45 TRDAETALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQ-VAELHMPVYDLP 103
+R + LY ELW CAGPLV VPR ERVFYFPQGH+EQ+ ASTNQ + +PV+DLP
Sbjct: 15 SRSYQDQLYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVFDLP 74
Query: 104 PKILCRVINVMLKAEPDTDEVFAQFV 129
PKILCRV++V LKAE +TDEV+AQ
Sbjct: 75 PKILCRVLDVTLKAEHETDEVYAQIT 100
>AT2G31610.1 | Symbols: | Ribosomal protein S3 family protein |
chr2:13450384-13451669 FORWARD LENGTH=250
Length = 250
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 69/84 (82%), Gaps = 6/84 (7%)
Query: 120 DTDEVFAQFVA-DGYSGVEVRVTTMKTEIIIRATRTQAVFDGSLSYEKGKRIRELTSVVQ 178
+ +EV + +A DGYSGVEVRVT M+TEIIIRATRTQ V EKG+RIRELTS+VQ
Sbjct: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG-----EKGRRIRELTSLVQ 74
Query: 179 KRFKFPKNNVELYAEKVNNRGLCA 202
KRFKFP ++VELYAEKVNNRGLCA
Sbjct: 75 KRFKFPVDSVELYAEKVNNRGLCA 98
>AT3G53870.1 | Symbols: | Ribosomal protein S3 family protein |
chr3:19951547-19952782 FORWARD LENGTH=249
Length = 249
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 69/84 (82%), Gaps = 6/84 (7%)
Query: 120 DTDEVFAQFVA-DGYSGVEVRVTTMKTEIIIRATRTQAVFDGSLSYEKGKRIRELTSVVQ 178
+ +EV + +A DGYSGVEVRVT M+TEIIIRATRTQ V EKG+RIRELTS+VQ
Sbjct: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG-----EKGRRIRELTSLVQ 74
Query: 179 KRFKFPKNNVELYAEKVNNRGLCA 202
KRFKFP ++VELYAEKVNNRGLCA
Sbjct: 75 KRFKFPVDSVELYAEKVNNRGLCA 98
>AT5G35530.1 | Symbols: | Ribosomal protein S3 family protein |
chr5:13710355-13712192 REVERSE LENGTH=248
Length = 248
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 69/84 (82%), Gaps = 6/84 (7%)
Query: 120 DTDEVFAQFVA-DGYSGVEVRVTTMKTEIIIRATRTQAVFDGSLSYEKGKRIRELTSVVQ 178
+ +EV + +A DGYSGVEVRVT M+TEIIIRATRTQ V EKG+RIRELTS+VQ
Sbjct: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG-----EKGRRIRELTSLVQ 74
Query: 179 KRFKFPKNNVELYAEKVNNRGLCA 202
KRFKFP+++VELYAEKV NRGLCA
Sbjct: 75 KRFKFPQDSVELYAEKVANRGLCA 98
>AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=636
Length = 636
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Query: 52 LYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHM-PVYDLPPKILCRV 110
LY ELW CAGPLV VP+ ERV+YFPQGH+EQ+EAST QV M P++ LPPKILC V
Sbjct: 9 LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNV 68
Query: 111 INVMLKAEPDTDEVFAQFV 129
+NV L+AE DTDEV+AQ
Sbjct: 69 MNVSLQAEKDTDEVYAQIT 87
>AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=638
Length = 638
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Query: 52 LYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHM-PVYDLPPKILCRV 110
LY ELW CAGPLV VP+ ERV+YFPQGH+EQ+EAST QV M P++ LPPKILC V
Sbjct: 9 LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNV 68
Query: 111 INVMLKAEPDTDEVFAQFV 129
+NV L+AE DTDEV+AQ
Sbjct: 69 MNVSLQAEKDTDEVYAQIT 87
>AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 |
chr5:14630151-14634106 FORWARD LENGTH=811
Length = 811
Score = 105 bits (262), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/118 (43%), Positives = 75/118 (63%), Gaps = 1/118 (0%)
Query: 47 DAETALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVY-DLPPK 105
+ E L ELWHACAGPLV++P G RV YFPQGH EQV A+TN+ + H+P Y LPP+
Sbjct: 14 EGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQ 73
Query: 106 ILCRVINVMLKAEPDTDEVFAQFVADGYSGVEVRVTTMKTEIIIRATRTQAVFDGSLS 163
++C++ NV + A+ +TDEV+AQ + E + T + E+ I + + F +L+
Sbjct: 74 LICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPSNYFCKTLT 131
>AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 |
chr5:14630151-14633916 FORWARD LENGTH=773
Length = 773
Score = 105 bits (261), Expect = 3e-23, Method: Composition-based stats.
Identities = 51/118 (43%), Positives = 75/118 (63%), Gaps = 1/118 (0%)
Query: 47 DAETALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVY-DLPPK 105
+ E L ELWHACAGPLV++P G RV YFPQGH EQV A+TN+ + H+P Y LPP+
Sbjct: 14 EGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQ 73
Query: 106 ILCRVINVMLKAEPDTDEVFAQFVADGYSGVEVRVTTMKTEIIIRATRTQAVFDGSLS 163
++C++ NV + A+ +TDEV+AQ + E + T + E+ I + + F +L+
Sbjct: 74 LICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPSNYFCKTLT 131
>AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=933
Length = 933
Score = 99.0 bits (245), Expect = 2e-21, Method: Composition-based stats.
Identities = 49/121 (40%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
Query: 44 PTRDAETALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVY-DL 102
P + L ELWHACAGPLV++P G RV YFPQGH EQV ASTN+ + H+P Y L
Sbjct: 12 PHEGEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSL 71
Query: 103 PPKILCRVINVMLKAEPDTDEVFAQFVADGYSGVEVRVTTMKTEIIIRATRTQAVFDGSL 162
P+++C++ NV + A+ +TDEV+AQ + E + + E+ + + + F +L
Sbjct: 72 HPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVPSRQPTNYFCKTL 131
Query: 163 S 163
+
Sbjct: 132 T 132
>AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=935
Length = 935
Score = 97.8 bits (242), Expect = 5e-21, Method: Composition-based stats.
Identities = 48/113 (42%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
Query: 52 LYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVY-DLPPKILCRV 110
L ELWHACAGPLV++P G RV YFPQGH EQV ASTN+ + H+P Y L P+++C++
Sbjct: 22 LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLICQL 81
Query: 111 INVMLKAEPDTDEVFAQFVADGYSGVEVRVTTMKTEIIIRATRTQAVFDGSLS 163
NV + A+ +TDEV+AQ + E + + E+ + + + F +L+
Sbjct: 82 HNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVPSRQPTNYFCKTLT 134
>AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 |
chr5:24308558-24312187 REVERSE LENGTH=788
Length = 788
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Query: 52 LYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVYDLPPKILCRVI 111
+Y ELWHACAGPL +P++G V YFPQGH+EQ +A + + L +P +DL P+I+CRV+
Sbjct: 62 IYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQ-DAMVSYSSPLEIPKFDLNPQIVCRVV 120
Query: 112 NVMLKAEPDTDEVFAQ 127
NV L A DTDEV+ Q
Sbjct: 121 NVQLLANKDTDEVYTQ 136
>AT1G34170.1 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12444265-12446764 REVERSE LENGTH=505
Length = 505
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 48 AETALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVYDLPPKIL 107
+T +Y +LW+ CAGPL +P+ GE+V+YFPQGHIE +E ST + P++DLP K+
Sbjct: 18 TKTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLR 77
Query: 108 CRVINVMLKAEPDTDEVFAQF-VADGYSGVEVRVTTMKTE--IIIRATRTQAVFDGSLS 163
CRV+ + K + +TDEV+AQ + + V TTM T I+ ++ D SLS
Sbjct: 78 CRVVAIDRKVDKNTDEVYAQISLMPDTTEVMTHNTTMDTRRPIVYFFSKILTASDVSLS 136
>AT1G34170.2 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12444265-12446764 REVERSE LENGTH=479
Length = 479
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 48 AETALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVYDLPPKIL 107
+T +Y +LW+ CAGPL +P+ GE+V+YFPQGHIE +E ST + P++DLP K+
Sbjct: 18 TKTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLR 77
Query: 108 CRVINVMLKAEPDTDEVFAQF-VADGYSGVEVRVTTMKTE--IIIRATRTQAVFDGSLS 163
CRV+ + K + +TDEV+AQ + + V TTM T I+ ++ D SLS
Sbjct: 78 CRVVAIDRKVDKNTDEVYAQISLMPDTTEVMTHNTTMDTRRPIVYFFSKILTASDVSLS 136
>AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12443578-12446764 REVERSE LENGTH=546
Length = 546
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 48 AETALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVYDLPPKIL 107
+T +Y +LW+ CAGPL +P+ GE+V+YFPQGHIE +E ST + P++DLP K+
Sbjct: 18 TKTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLR 77
Query: 108 CRVINVMLKAEPDTDEVFAQF-VADGYSGVEVRVTTMKTE--IIIRATRTQAVFDGSLS 163
CRV+ + K + +TDEV+AQ + + V TTM T I+ ++ D SLS
Sbjct: 78 CRVVAIDRKVDKNTDEVYAQISLMPDTTEVMTHNTTMDTRRPIVYFFSKILTASDVSLS 136
>AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 |
chr1:13108634-13111700 FORWARD LENGTH=605
Length = 605
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 56/80 (70%)
Query: 48 AETALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVYDLPPKIL 107
+++ +Y +LW CAGPL +P+ GE+V+YFPQGHIE VEAST + P+ D P K+
Sbjct: 20 SKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPICDFPSKLQ 79
Query: 108 CRVINVMLKAEPDTDEVFAQ 127
CRVI + LK E ++DE +A+
Sbjct: 80 CRVIAIQLKVENNSDETYAE 99
>AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 |
chr1:12508548-12511520 REVERSE LENGTH=593
Length = 593
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 56/81 (69%)
Query: 48 AETALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVYDLPPKIL 107
+++ +Y +LW CAGPL +P+ GE+V+YFPQGHIE VE ST + P+ DLP K+
Sbjct: 20 SKSYVYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQPICDLPSKLQ 79
Query: 108 CRVINVMLKAEPDTDEVFAQF 128
CRVI + LK E ++DE +A+
Sbjct: 80 CRVIAIHLKVENNSDETYAEI 100
>AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 |
chr1:13082819-13085830 REVERSE LENGTH=598
Length = 598
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 57/81 (70%)
Query: 48 AETALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVYDLPPKIL 107
+++ +Y +LW CAGPL +P+ GE+V+YFPQG+IE VEAST + P+ DLP K+
Sbjct: 20 SKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQPICDLPSKLQ 79
Query: 108 CRVINVMLKAEPDTDEVFAQF 128
CRVI + LK E ++DE +A+
Sbjct: 80 CRVIAIHLKVENNSDETYAKI 100
>AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 |
chr1:12556005-12559082 FORWARD LENGTH=598
Length = 598
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 57/80 (71%)
Query: 48 AETALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVYDLPPKIL 107
+++ +Y +LW CAGPL +P+ GE+++YFPQG+IE VEAST + P+ DLP K+
Sbjct: 20 SKSYMYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKPICDLPSKLQ 79
Query: 108 CRVINVMLKAEPDTDEVFAQ 127
CRVI + LK E ++DE +A+
Sbjct: 80 CRVIAIQLKVENNSDETYAE 99
>AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 |
chr1:12577722-12580824 FORWARD LENGTH=606
Length = 606
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 57/81 (70%)
Query: 48 AETALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVYDLPPKIL 107
+++ +Y +LW CAGPL +P+ GE V+YFPQG+IE V+AST + P+ DLP K+
Sbjct: 20 SKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQPICDLPSKLQ 79
Query: 108 CRVINVMLKAEPDTDEVFAQF 128
CRVI + LK E ++DE++A+
Sbjct: 80 CRVIAIHLKVENNSDEIYAEI 100
>AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1165
Length = 1165
Score = 90.5 bits (223), Expect = 7e-19, Method: Composition-based stats.
Identities = 42/85 (49%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 44 PTRDAETALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVY-DL 102
P + ELWHACAGPL+++P G V YFPQGH EQV AS + + +P Y +L
Sbjct: 13 PVEGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDF-IPSYPNL 71
Query: 103 PPKILCRVINVMLKAEPDTDEVFAQ 127
P K++C + NV L A+P+TDEV+AQ
Sbjct: 72 PSKLICMLHNVTLNADPETDEVYAQ 96
>AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1164
Length = 1164
Score = 90.5 bits (223), Expect = 7e-19, Method: Composition-based stats.
Identities = 42/85 (49%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 44 PTRDAETALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVY-DL 102
P + ELWHACAGPL+++P G V YFPQGH EQV AS + + +P Y +L
Sbjct: 13 PVEGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDF-IPSYPNL 71
Query: 103 PPKILCRVINVMLKAEPDTDEVFAQ 127
P K++C + NV L A+P+TDEV+AQ
Sbjct: 72 PSKLICMLHNVTLNADPETDEVYAQ 96
>AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23,
IAA25 | Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1150
Length = 1150
Score = 90.5 bits (223), Expect = 8e-19, Method: Composition-based stats.
Identities = 42/85 (49%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 44 PTRDAETALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVY-DL 102
P + ELWHACAGPL+++P G V YFPQGH EQV AS + + +P Y +L
Sbjct: 13 PVEGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDF-IPSYPNL 71
Query: 103 PPKILCRVINVMLKAEPDTDEVFAQ 127
P K++C + NV L A+P+TDEV+AQ
Sbjct: 72 PSKLICMLHNVTLNADPETDEVYAQ 96
>AT1G43950.1 | Symbols: ARF23 | auxin response factor 23 |
chr1:16672582-16673952 REVERSE LENGTH=222
Length = 222
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 55/81 (67%)
Query: 48 AETALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVYDLPPKIL 107
+++ +Y +LW CAGPL +P+ GE+V+YFPQGHIE VEAST + P DLP K+
Sbjct: 20 SKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNCDLPSKLQ 79
Query: 108 CRVINVMLKAEPDTDEVFAQF 128
CRVI + LK E ++DE + +
Sbjct: 80 CRVIAIHLKVENNSDETYVEI 100
>AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 |
chr1:12927457-12930523 REVERSE LENGTH=590
Length = 590
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 56/80 (70%)
Query: 48 AETALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVYDLPPKIL 107
+++ +Y +LW CAGPL +P+ GE V+YFPQG+IE V+AST + P+ DLP K+
Sbjct: 20 SKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQPICDLPSKLQ 79
Query: 108 CRVINVMLKAEPDTDEVFAQ 127
CRVI + LK E ++DE +A+
Sbjct: 80 CRVIAIHLKVENNSDETYAE 99
>AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor B3
family protein / auxin-responsive factor AUX/IAA-related
| chr1:6887353-6891182 FORWARD LENGTH=902
Length = 902
Score = 89.7 bits (221), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/74 (54%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 55 ELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVY-DLPPKILCRVINV 113
ELWHACAGPLV +P+ G V+YF QGH EQV ST + A +P Y +LP +++C+V NV
Sbjct: 54 ELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNV 113
Query: 114 MLKAEPDTDEVFAQ 127
L A+ D+DE++AQ
Sbjct: 114 TLHADKDSDEIYAQ 127
>AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 family
protein / auxin-responsive factor AUX/IAA-related |
chr2:14325444-14328613 REVERSE LENGTH=608
Length = 608
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 49/73 (67%), Gaps = 7/73 (9%)
Query: 55 ELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVYDLPPKILCRVINVM 114
ELWHACAGPL+++P+ G V YFPQGH+E Q + +Y LPP + CR+++V
Sbjct: 54 ELWHACAGPLISLPKRGSLVLYFPQGHLE-------QAPDFSAAIYGLPPHVFCRILDVK 106
Query: 115 LKAEPDTDEVFAQ 127
L AE TDEV+AQ
Sbjct: 107 LHAETTTDEVYAQ 119
>AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response factor
19 | chr1:6628395-6632779 REVERSE LENGTH=1086
Length = 1086
Score = 81.3 bits (199), Expect = 5e-16, Method: Composition-based stats.
Identities = 39/74 (52%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Query: 55 ELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVY-DLPPKILCRVINV 113
+LWHACAGPLV++P G V YFPQGH EQV AS + + +P Y +LP K++C + +V
Sbjct: 23 QLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDF-IPNYPNLPSKLICLLHSV 81
Query: 114 MLKAEPDTDEVFAQ 127
L A+ +TDEV+AQ
Sbjct: 82 TLHADTETDEVYAQ 95
>AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 |
chr2:12114331-12116665 FORWARD LENGTH=693
Length = 693
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 48/79 (60%), Gaps = 6/79 (7%)
Query: 49 ETALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVYDLPPKILC 108
E +L +LWHACAG +V +P VFYF QGH E A + H P +PP ILC
Sbjct: 4 EKSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAP----PDFHAP--RVPPLILC 57
Query: 109 RVINVMLKAEPDTDEVFAQ 127
RV++V A+ +TDEVFA+
Sbjct: 58 RVVSVKFLADAETDEVFAK 76
>AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 |
chr4:14703369-14705564 REVERSE LENGTH=670
Length = 670
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 6/80 (7%)
Query: 49 ETALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPVYDLPPKILC 108
E L +LWHACAG +V +P +VFYFPQGH E + + V ++P+ PP +LC
Sbjct: 13 EKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAEN---AYDCVDFGNLPI---PPMVLC 66
Query: 109 RVINVMLKAEPDTDEVFAQF 128
RV+ + A+ ++DEVFA+
Sbjct: 67 RVLAIKYMADAESDEVFAKL 86
>AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 |
chr1:29272405-29275193 FORWARD LENGTH=585
Length = 585
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Query: 44 PTRDAETALYRE----LWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAELHMPV 99
P+ A +RE +W ACAG V +P RV+YFPQGH+E + + PV
Sbjct: 4 PSATAGDINHREVDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSPV 63
Query: 100 YDLPPKILCRVINVMLKAEPDTDEVFAQFV 129
C + ++ L A+P TDEVFA +
Sbjct: 64 -------PCIITSIQLLADPVTDEVFAHLI 86