Miyakogusa Predicted Gene
- Lj0g3v0252829.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0252829.2 tr|A0EVX4|A0EVX4_9FABA Spermidine synthase
OS=Ammopiptanthus mongolicus GN=speE PE=2
SV=1,91.48,0,Spermidine_synth,Spermidine/spermine synthases family;
S-adenosyl-L-methionine-dependent methyltrans,CUFF.16589.2
(227 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G23820.1 | Symbols: SPDS1 | spermidine synthase 1 | chr1:8420... 356 6e-99
AT1G70310.1 | Symbols: SPDS2 | spermidine synthase 2 | chr1:2648... 339 1e-93
AT5G53120.5 | Symbols: SPDS3, SPMS | spermidine synthase 3 | chr... 296 8e-81
AT5G53120.4 | Symbols: SPDS3, SPMS | spermidine synthase 3 | chr... 296 8e-81
AT5G53120.3 | Symbols: SPDS3, SPMS | spermidine synthase 3 | chr... 296 8e-81
AT5G53120.2 | Symbols: SPDS3, SPMS | spermidine synthase 3 | chr... 296 8e-81
AT5G53120.1 | Symbols: SPDS3, SPMS, ATSPDS3 | spermidine synthas... 296 8e-81
AT5G53120.6 | Symbols: SPDS3 | spermidine synthase 3 | chr5:2153... 285 2e-77
AT1G23820.2 | Symbols: SPDS1 | spermidine synthase 1 | chr1:8420... 260 4e-70
AT5G19530.2 | Symbols: ACL5 | S-adenosyl-L-methionine-dependent ... 80 9e-16
AT5G19530.1 | Symbols: ACL5 | S-adenosyl-L-methionine-dependent ... 80 1e-15
>AT1G23820.1 | Symbols: SPDS1 | spermidine synthase 1 |
chr1:8420278-8422724 FORWARD LENGTH=378
Length = 378
Score = 356 bits (914), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 170/227 (74%), Positives = 194/227 (85%), Gaps = 1/227 (0%)
Query: 1 MMTHLALCSIPNPXXXXXXXXXXXXXXREISRHSSVEKIDICEIDKMVVDVSKQFFPDVA 60
M+THL LCSIPNP RE++RH+S+E+ID+CEIDKMVVDVSKQFFPDVA
Sbjct: 153 MITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVA 212
Query: 61 VGFDDQRVTLRIGDGVAFLKEAPEGSYDAVIVDSSDPIGPAQELFEKPFFELVAKALRPG 120
+G++D RV L IGDGVAFLK A EGSYDAVIVDSSDPIGPA+ELFEKPFF+ VA+ALRPG
Sbjct: 213 IGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG 272
Query: 121 GVICTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVHTYPSGMIGFMLCSTEGPPVD 180
GV+CTQAES+WLHM IIEDIV+NCR+IFKGSVNYAWT+V TYPSG+IGFMLCSTEGP VD
Sbjct: 273 GVVCTQAESLWLHMDIIEDIVSNCREIFKGSVNYAWTSVPTYPSGVIGFMLCSTEGPDVD 332
Query: 181 FKHPVNPIDEKECQKSVRPLKFYNSEIHTAAFCLPSFAKRKIGSEAT 227
FKHP+NPIDE KS PLKFYN+EIH+AAFCLPSFAK+ I S+A
Sbjct: 333 FKHPLNPIDESS-SKSNGPLKFYNAEIHSAAFCLPSFAKKVIESKAN 378
>AT1G70310.1 | Symbols: SPDS2 | spermidine synthase 2 |
chr1:26485497-26487352 REVERSE LENGTH=340
Length = 340
Score = 339 bits (869), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 165/228 (72%), Positives = 189/228 (82%), Gaps = 1/228 (0%)
Query: 1 MMTHLALCSIPNPXXXXXXXXXXXXXXREISRHSSVEKIDICEIDKMVVDVSKQFFPDVA 60
M+THL LCSI NP RE++RHSSVE+IDICEIDKMVVDV+KQ+FP+VA
Sbjct: 113 MITHLPLCSISNPKKVLVIGGGDGGVLREVARHSSVEQIDICEIDKMVVDVAKQYFPNVA 172
Query: 61 VGFDDQRVTLRIGDGVAFLKEAPEGSYDAVIVDSSDPIGPAQELFEKPFFELVAKALRPG 120
VG++D RV L IGDGVAFLK A EG+YDAVIVDSSDPIGPA+ELFEKPFFE V +ALRPG
Sbjct: 173 VGYEDPRVNLIIGDGVAFLKNAAEGTYDAVIVDSSDPIGPAKELFEKPFFESVNRALRPG 232
Query: 121 GVICTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVHTYPSGMIGFMLCSTEGPPVD 180
GV+CTQAES+WLHM IIEDIV+NCR IFKGSVNYAWT+V TYPSG+IGFMLCS+EGP VD
Sbjct: 233 GVVCTQAESLWLHMDIIEDIVSNCRDIFKGSVNYAWTSVPTYPSGVIGFMLCSSEGPQVD 292
Query: 181 FKHPVNPIDEKECQ-KSVRPLKFYNSEIHTAAFCLPSFAKRKIGSEAT 227
FK PV+ ID E KS PLK+YN+EIH+AAFCLPSFAK+ I S+A
Sbjct: 293 FKKPVSLIDTDESSIKSHCPLKYYNAEIHSAAFCLPSFAKKVIDSKAN 340
>AT5G53120.5 | Symbols: SPDS3, SPMS | spermidine synthase 3 |
chr5:21535429-21537653 FORWARD LENGTH=359
Length = 359
Score = 296 bits (758), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 140/225 (62%), Positives = 176/225 (78%), Gaps = 2/225 (0%)
Query: 1 MMTHLALCSIPNPXXXXXXXXXXXXXXREISRHSSVEKIDICEIDKMVVDVSKQFFPDVA 60
M+ HL LCSI +P REISRHSSVE IDICEIDKMV+DVSK+FFP++A
Sbjct: 132 MIAHLPLCSISSPKNVLVVGGGDGGVLREISRHSSVEVIDICEIDKMVIDVSKKFFPELA 191
Query: 61 VGFDDQRVTLRIGDGVAFLKEAPEGSYDAVIVDSSDPIGPAQELFEKPFFELVAKALRPG 120
VGFDD RV L IGD FL+++PEG YDA+IVDSSDP+GPA L EKPFFE +A+AL+PG
Sbjct: 192 VGFDDPRVQLHIGDAAEFLRKSPEGKYDAIIVDSSDPVGPALALVEKPFFETLARALKPG 251
Query: 121 GVICTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVHTYPSGMIGFMLCSTEGPPVD 180
GV+C AES+WLH H+IED+++ CRQ FK SV+YAW++V TYPSG+IGF+LCSTEGP VD
Sbjct: 252 GVLCNMAESMWLHTHLIEDMISICRQTFK-SVHYAWSSVPTYPSGVIGFVLCSTEGPAVD 310
Query: 181 FKHPVNPIDEKE-CQKSVRPLKFYNSEIHTAAFCLPSFAKRKIGS 224
FK+P+NPI++ + R LKFYNS++H AAF LP+F +R++ S
Sbjct: 311 FKNPINPIEKLDGAMTHKRELKFYNSDMHRAAFALPTFLRREVAS 355
>AT5G53120.4 | Symbols: SPDS3, SPMS | spermidine synthase 3 |
chr5:21535429-21537653 FORWARD LENGTH=359
Length = 359
Score = 296 bits (758), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 140/225 (62%), Positives = 176/225 (78%), Gaps = 2/225 (0%)
Query: 1 MMTHLALCSIPNPXXXXXXXXXXXXXXREISRHSSVEKIDICEIDKMVVDVSKQFFPDVA 60
M+ HL LCSI +P REISRHSSVE IDICEIDKMV+DVSK+FFP++A
Sbjct: 132 MIAHLPLCSISSPKNVLVVGGGDGGVLREISRHSSVEVIDICEIDKMVIDVSKKFFPELA 191
Query: 61 VGFDDQRVTLRIGDGVAFLKEAPEGSYDAVIVDSSDPIGPAQELFEKPFFELVAKALRPG 120
VGFDD RV L IGD FL+++PEG YDA+IVDSSDP+GPA L EKPFFE +A+AL+PG
Sbjct: 192 VGFDDPRVQLHIGDAAEFLRKSPEGKYDAIIVDSSDPVGPALALVEKPFFETLARALKPG 251
Query: 121 GVICTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVHTYPSGMIGFMLCSTEGPPVD 180
GV+C AES+WLH H+IED+++ CRQ FK SV+YAW++V TYPSG+IGF+LCSTEGP VD
Sbjct: 252 GVLCNMAESMWLHTHLIEDMISICRQTFK-SVHYAWSSVPTYPSGVIGFVLCSTEGPAVD 310
Query: 181 FKHPVNPIDEKE-CQKSVRPLKFYNSEIHTAAFCLPSFAKRKIGS 224
FK+P+NPI++ + R LKFYNS++H AAF LP+F +R++ S
Sbjct: 311 FKNPINPIEKLDGAMTHKRELKFYNSDMHRAAFALPTFLRREVAS 355
>AT5G53120.3 | Symbols: SPDS3, SPMS | spermidine synthase 3 |
chr5:21535429-21537653 FORWARD LENGTH=359
Length = 359
Score = 296 bits (758), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 140/225 (62%), Positives = 176/225 (78%), Gaps = 2/225 (0%)
Query: 1 MMTHLALCSIPNPXXXXXXXXXXXXXXREISRHSSVEKIDICEIDKMVVDVSKQFFPDVA 60
M+ HL LCSI +P REISRHSSVE IDICEIDKMV+DVSK+FFP++A
Sbjct: 132 MIAHLPLCSISSPKNVLVVGGGDGGVLREISRHSSVEVIDICEIDKMVIDVSKKFFPELA 191
Query: 61 VGFDDQRVTLRIGDGVAFLKEAPEGSYDAVIVDSSDPIGPAQELFEKPFFELVAKALRPG 120
VGFDD RV L IGD FL+++PEG YDA+IVDSSDP+GPA L EKPFFE +A+AL+PG
Sbjct: 192 VGFDDPRVQLHIGDAAEFLRKSPEGKYDAIIVDSSDPVGPALALVEKPFFETLARALKPG 251
Query: 121 GVICTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVHTYPSGMIGFMLCSTEGPPVD 180
GV+C AES+WLH H+IED+++ CRQ FK SV+YAW++V TYPSG+IGF+LCSTEGP VD
Sbjct: 252 GVLCNMAESMWLHTHLIEDMISICRQTFK-SVHYAWSSVPTYPSGVIGFVLCSTEGPAVD 310
Query: 181 FKHPVNPIDEKE-CQKSVRPLKFYNSEIHTAAFCLPSFAKRKIGS 224
FK+P+NPI++ + R LKFYNS++H AAF LP+F +R++ S
Sbjct: 311 FKNPINPIEKLDGAMTHKRELKFYNSDMHRAAFALPTFLRREVAS 355
>AT5G53120.2 | Symbols: SPDS3, SPMS | spermidine synthase 3 |
chr5:21535429-21537653 FORWARD LENGTH=359
Length = 359
Score = 296 bits (758), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 140/225 (62%), Positives = 176/225 (78%), Gaps = 2/225 (0%)
Query: 1 MMTHLALCSIPNPXXXXXXXXXXXXXXREISRHSSVEKIDICEIDKMVVDVSKQFFPDVA 60
M+ HL LCSI +P REISRHSSVE IDICEIDKMV+DVSK+FFP++A
Sbjct: 132 MIAHLPLCSISSPKNVLVVGGGDGGVLREISRHSSVEVIDICEIDKMVIDVSKKFFPELA 191
Query: 61 VGFDDQRVTLRIGDGVAFLKEAPEGSYDAVIVDSSDPIGPAQELFEKPFFELVAKALRPG 120
VGFDD RV L IGD FL+++PEG YDA+IVDSSDP+GPA L EKPFFE +A+AL+PG
Sbjct: 192 VGFDDPRVQLHIGDAAEFLRKSPEGKYDAIIVDSSDPVGPALALVEKPFFETLARALKPG 251
Query: 121 GVICTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVHTYPSGMIGFMLCSTEGPPVD 180
GV+C AES+WLH H+IED+++ CRQ FK SV+YAW++V TYPSG+IGF+LCSTEGP VD
Sbjct: 252 GVLCNMAESMWLHTHLIEDMISICRQTFK-SVHYAWSSVPTYPSGVIGFVLCSTEGPAVD 310
Query: 181 FKHPVNPIDEKE-CQKSVRPLKFYNSEIHTAAFCLPSFAKRKIGS 224
FK+P+NPI++ + R LKFYNS++H AAF LP+F +R++ S
Sbjct: 311 FKNPINPIEKLDGAMTHKRELKFYNSDMHRAAFALPTFLRREVAS 355
>AT5G53120.1 | Symbols: SPDS3, SPMS, ATSPDS3 | spermidine synthase 3
| chr5:21535429-21537653 FORWARD LENGTH=359
Length = 359
Score = 296 bits (758), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 140/225 (62%), Positives = 176/225 (78%), Gaps = 2/225 (0%)
Query: 1 MMTHLALCSIPNPXXXXXXXXXXXXXXREISRHSSVEKIDICEIDKMVVDVSKQFFPDVA 60
M+ HL LCSI +P REISRHSSVE IDICEIDKMV+DVSK+FFP++A
Sbjct: 132 MIAHLPLCSISSPKNVLVVGGGDGGVLREISRHSSVEVIDICEIDKMVIDVSKKFFPELA 191
Query: 61 VGFDDQRVTLRIGDGVAFLKEAPEGSYDAVIVDSSDPIGPAQELFEKPFFELVAKALRPG 120
VGFDD RV L IGD FL+++PEG YDA+IVDSSDP+GPA L EKPFFE +A+AL+PG
Sbjct: 192 VGFDDPRVQLHIGDAAEFLRKSPEGKYDAIIVDSSDPVGPALALVEKPFFETLARALKPG 251
Query: 121 GVICTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVHTYPSGMIGFMLCSTEGPPVD 180
GV+C AES+WLH H+IED+++ CRQ FK SV+YAW++V TYPSG+IGF+LCSTEGP VD
Sbjct: 252 GVLCNMAESMWLHTHLIEDMISICRQTFK-SVHYAWSSVPTYPSGVIGFVLCSTEGPAVD 310
Query: 181 FKHPVNPIDEKE-CQKSVRPLKFYNSEIHTAAFCLPSFAKRKIGS 224
FK+P+NPI++ + R LKFYNS++H AAF LP+F +R++ S
Sbjct: 311 FKNPINPIEKLDGAMTHKRELKFYNSDMHRAAFALPTFLRREVAS 355
>AT5G53120.6 | Symbols: SPDS3 | spermidine synthase 3 |
chr5:21535429-21537653 FORWARD LENGTH=386
Length = 386
Score = 285 bits (728), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 166/198 (83%), Gaps = 2/198 (1%)
Query: 28 REISRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFDDQRVTLRIGDGVAFLKEAPEGSY 87
REISRHSSVE IDICEIDKMV+DVSK+FFP++AVGFDD RV L IGD FL+++PEG Y
Sbjct: 186 REISRHSSVEVIDICEIDKMVIDVSKKFFPELAVGFDDPRVQLHIGDAAEFLRKSPEGKY 245
Query: 88 DAVIVDSSDPIGPAQELFEKPFFELVAKALRPGGVICTQAESIWLHMHIIEDIVANCRQI 147
DA+IVDSSDP+GPA L EKPFFE +A+AL+PGGV+C AES+WLH H+IED+++ CRQ
Sbjct: 246 DAIIVDSSDPVGPALALVEKPFFETLARALKPGGVLCNMAESMWLHTHLIEDMISICRQT 305
Query: 148 FKGSVNYAWTTVHTYPSGMIGFMLCSTEGPPVDFKHPVNPIDEKE-CQKSVRPLKFYNSE 206
FK SV+YAW++V TYPSG+IGF+LCSTEGP VDFK+P+NPI++ + R LKFYNS+
Sbjct: 306 FK-SVHYAWSSVPTYPSGVIGFVLCSTEGPAVDFKNPINPIEKLDGAMTHKRELKFYNSD 364
Query: 207 IHTAAFCLPSFAKRKIGS 224
+H AAF LP+F +R++ S
Sbjct: 365 MHRAAFALPTFLRREVAS 382
>AT1G23820.2 | Symbols: SPDS1 | spermidine synthase 1 |
chr1:8420278-8422480 FORWARD LENGTH=327
Length = 327
Score = 260 bits (665), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 122/163 (74%), Positives = 140/163 (85%)
Query: 1 MMTHLALCSIPNPXXXXXXXXXXXXXXREISRHSSVEKIDICEIDKMVVDVSKQFFPDVA 60
M+THL LCSIPNP RE++RH+S+E+ID+CEIDKMVVDVSKQFFPDVA
Sbjct: 153 MITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVA 212
Query: 61 VGFDDQRVTLRIGDGVAFLKEAPEGSYDAVIVDSSDPIGPAQELFEKPFFELVAKALRPG 120
+G++D RV L IGDGVAFLK A EGSYDAVIVDSSDPIGPA+ELFEKPFF+ VA+ALRPG
Sbjct: 213 IGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG 272
Query: 121 GVICTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVHTYP 163
GV+CTQAES+WLHM IIEDIV+NCR+IFKGSVNYAWT+V TYP
Sbjct: 273 GVVCTQAESLWLHMDIIEDIVSNCREIFKGSVNYAWTSVPTYP 315
>AT5G19530.2 | Symbols: ACL5 | S-adenosyl-L-methionine-dependent
methyltransferases superfamily protein |
chr5:6589176-6591070 REVERSE LENGTH=332
Length = 332
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 6/153 (3%)
Query: 2 MTHLALCSIPNPXXXXXXXXXXXXXXREISRHSSVEKIDICEIDKMVVDVSKQFFPDVAV 61
+ H AL PNP REI +H+++EK+ +C+ID+ VVD ++F +
Sbjct: 89 LIHPALLFHPNPKTVFIMGGGEGSAAREILKHTTIEKVVMCDIDQEVVDFCRRFLTVNSD 148
Query: 62 GFDDQRVTLRIGDGVAFLKEAPEGSYDAVIVDSSDPI--GPAQELFEKPFFELVAK-ALR 118
F ++++ L I D A L E E +D ++ D +DP+ GP +L+ K F++ + K L
Sbjct: 149 AFCNKKLELVIKDAKAEL-EKREEKFDIIVGDLADPVEGGPCYQLYTKSFYQNILKPKLS 207
Query: 119 PGGVICTQA--ESIWLHMHIIEDIVANCRQIFK 149
P G+ TQA I+ H + I +Q+FK
Sbjct: 208 PNGIFVTQAGPAGIFTHKEVFTSIYNTMKQVFK 240
>AT5G19530.1 | Symbols: ACL5 | S-adenosyl-L-methionine-dependent
methyltransferases superfamily protein |
chr5:6589176-6591091 REVERSE LENGTH=339
Length = 339
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 6/153 (3%)
Query: 2 MTHLALCSIPNPXXXXXXXXXXXXXXREISRHSSVEKIDICEIDKMVVDVSKQFFPDVAV 61
+ H AL PNP REI +H+++EK+ +C+ID+ VVD ++F +
Sbjct: 96 LIHPALLFHPNPKTVFIMGGGEGSAAREILKHTTIEKVVMCDIDQEVVDFCRRFLTVNSD 155
Query: 62 GFDDQRVTLRIGDGVAFLKEAPEGSYDAVIVDSSDPI--GPAQELFEKPFFELVAK-ALR 118
F ++++ L I D A L E E +D ++ D +DP+ GP +L+ K F++ + K L
Sbjct: 156 AFCNKKLELVIKDAKAEL-EKREEKFDIIVGDLADPVEGGPCYQLYTKSFYQNILKPKLS 214
Query: 119 PGGVICTQA--ESIWLHMHIIEDIVANCRQIFK 149
P G+ TQA I+ H + I +Q+FK
Sbjct: 215 PNGIFVTQAGPAGIFTHKEVFTSIYNTMKQVFK 247