Miyakogusa Predicted Gene

Lj0g3v0252829.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0252829.1 Non Chatacterized Hit- tr|B7FHY4|B7FHY4_MEDTR
Putative uncharacterized protein (Fragment)
OS=Medicag,81.31,0,S-adenosyl-L-methionine-dependent
methyltransferases,NULL; Spermine_synth,Spermidine/spermine
syntha,CUFF.16589.1
         (207 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G23820.1 | Symbols: SPDS1 | spermidine synthase 1 | chr1:8420...   282   1e-76
AT1G23820.2 | Symbols: SPDS1 | spermidine synthase 1 | chr1:8420...   281   2e-76
AT1G70310.1 | Symbols: SPDS2 | spermidine synthase 2 | chr1:2648...   280   4e-76
AT5G53120.5 | Symbols: SPDS3, SPMS | spermidine synthase 3 | chr...   241   2e-64
AT5G53120.4 | Symbols: SPDS3, SPMS | spermidine synthase 3 | chr...   241   2e-64
AT5G53120.3 | Symbols: SPDS3, SPMS | spermidine synthase 3 | chr...   241   2e-64
AT5G53120.2 | Symbols: SPDS3, SPMS | spermidine synthase 3 | chr...   241   2e-64
AT5G53120.1 | Symbols: SPDS3, SPMS, ATSPDS3 | spermidine synthas...   241   2e-64
AT5G53120.6 | Symbols: SPDS3 | spermidine synthase 3 | chr5:2153...   228   3e-60
AT5G19530.2 | Symbols: ACL5 | S-adenosyl-L-methionine-dependent ...    99   2e-21
AT5G19530.1 | Symbols: ACL5 | S-adenosyl-L-methionine-dependent ...    99   2e-21

>AT1G23820.1 | Symbols: SPDS1 | spermidine synthase 1 |
           chr1:8420278-8422724 FORWARD LENGTH=378
          Length = 378

 Score =  282 bits (722), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 138/198 (69%), Positives = 161/198 (81%), Gaps = 9/198 (4%)

Query: 14  LKRQKDDEENGVSIGNHSDGNG--------LSSVIPGWFSEISPMWPGEAHSLKVEKILF 65
           LKR +++++NG +    ++ NG         S+VIPGWFSE+SPMWPGEAHSLKVEK+LF
Sbjct: 55  LKRPREEDDNGGAATMETE-NGDQKKEPACFSTVIPGWFSEMSPMWPGEAHSLKVEKVLF 113

Query: 66  QGKSDYQKVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMMTHLALCSIPNPXXXXXXXX 125
           QGKSDYQ V+VFQS+TYGKVLVLDGVIQLTERDECAYQEM+THL LCSIPNP        
Sbjct: 114 QGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGG 173

Query: 126 XXXXXXREISRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFDDQRVTLRIGDGVAFLKE 185
                 RE++RH+S+E+ID+CEIDKMVVDVSKQFFPDVA+G++D RV L IGDGVAFLK 
Sbjct: 174 GDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKN 233

Query: 186 APEGSYDAVIVDSSDPIG 203
           A EGSYDAVIVDSSDPIG
Sbjct: 234 AAEGSYDAVIVDSSDPIG 251


>AT1G23820.2 | Symbols: SPDS1 | spermidine synthase 1 |
           chr1:8420278-8422480 FORWARD LENGTH=327
          Length = 327

 Score =  281 bits (720), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 138/198 (69%), Positives = 161/198 (81%), Gaps = 9/198 (4%)

Query: 14  LKRQKDDEENGVSIGNHSDGNG--------LSSVIPGWFSEISPMWPGEAHSLKVEKILF 65
           LKR +++++NG +    ++ NG         S+VIPGWFSE+SPMWPGEAHSLKVEK+LF
Sbjct: 55  LKRPREEDDNGGAATMETE-NGDQKKEPACFSTVIPGWFSEMSPMWPGEAHSLKVEKVLF 113

Query: 66  QGKSDYQKVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMMTHLALCSIPNPXXXXXXXX 125
           QGKSDYQ V+VFQS+TYGKVLVLDGVIQLTERDECAYQEM+THL LCSIPNP        
Sbjct: 114 QGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGG 173

Query: 126 XXXXXXREISRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFDDQRVTLRIGDGVAFLKE 185
                 RE++RH+S+E+ID+CEIDKMVVDVSKQFFPDVA+G++D RV L IGDGVAFLK 
Sbjct: 174 GDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKN 233

Query: 186 APEGSYDAVIVDSSDPIG 203
           A EGSYDAVIVDSSDPIG
Sbjct: 234 AAEGSYDAVIVDSSDPIG 251


>AT1G70310.1 | Symbols: SPDS2 | spermidine synthase 2 |
           chr1:26485497-26487352 REVERSE LENGTH=340
          Length = 340

 Score =  280 bits (717), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 141/211 (66%), Positives = 167/211 (79%), Gaps = 8/211 (3%)

Query: 1   MAAETKSVVVESTLKRQKDDEE--NGVSIGNHSDG------NGLSSVIPGWFSEISPMWP 52
           M++  ++ V +  +KR ++ EE  NG ++   + G      + +SS+IPGWFSEISPMWP
Sbjct: 1   MSSTQEASVTDLPVKRPREAEEDNNGGAMETENGGGEIKEPSCMSSIIPGWFSEISPMWP 60

Query: 53  GEAHSLKVEKILFQGKSDYQKVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMMTHLALC 112
           GEAHSLKVEKILFQGKSDYQ V+VFQS+TYGKVLVLDGVIQLTERDECAYQEM+THL LC
Sbjct: 61  GEAHSLKVEKILFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLC 120

Query: 113 SIPNPXXXXXXXXXXXXXXREISRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFDDQRV 172
           SI NP              RE++RHSSVE+IDICEIDKMVVDV+KQ+FP+VAVG++D RV
Sbjct: 121 SISNPKKVLVIGGGDGGVLREVARHSSVEQIDICEIDKMVVDVAKQYFPNVAVGYEDPRV 180

Query: 173 TLRIGDGVAFLKEAPEGSYDAVIVDSSDPIG 203
            L IGDGVAFLK A EG+YDAVIVDSSDPIG
Sbjct: 181 NLIIGDGVAFLKNAAEGTYDAVIVDSSDPIG 211


>AT5G53120.5 | Symbols: SPDS3, SPMS | spermidine synthase 3 |
           chr5:21535429-21537653 FORWARD LENGTH=359
          Length = 359

 Score =  241 bits (615), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 116/187 (62%), Positives = 140/187 (74%), Gaps = 15/187 (8%)

Query: 32  DGNGLSSVIPGWFSEI---------------SPMWPGEAHSLKVEKILFQGKSDYQKVMV 76
           D    S+V+ GWFSE                +PMWPGEAHSLKVEK+LF+ KSD+Q+V+V
Sbjct: 44  DAKCHSTVVSGWFSEPHPRSGKKGGKAVYFNNPMWPGEAHSLKVEKVLFKDKSDFQEVLV 103

Query: 77  FQSSTYGKVLVLDGVIQLTERDECAYQEMMTHLALCSIPNPXXXXXXXXXXXXXXREISR 136
           F+S+TYGKVLVLDG++QLTE+DECAYQEM+ HL LCSI +P              REISR
Sbjct: 104 FESATYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSISSPKNVLVVGGGDGGVLREISR 163

Query: 137 HSSVEKIDICEIDKMVVDVSKQFFPDVAVGFDDQRVTLRIGDGVAFLKEAPEGSYDAVIV 196
           HSSVE IDICEIDKMV+DVSK+FFP++AVGFDD RV L IGD   FL+++PEG YDA+IV
Sbjct: 164 HSSVEVIDICEIDKMVIDVSKKFFPELAVGFDDPRVQLHIGDAAEFLRKSPEGKYDAIIV 223

Query: 197 DSSDPIG 203
           DSSDP+G
Sbjct: 224 DSSDPVG 230


>AT5G53120.4 | Symbols: SPDS3, SPMS | spermidine synthase 3 |
           chr5:21535429-21537653 FORWARD LENGTH=359
          Length = 359

 Score =  241 bits (615), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 116/187 (62%), Positives = 140/187 (74%), Gaps = 15/187 (8%)

Query: 32  DGNGLSSVIPGWFSEI---------------SPMWPGEAHSLKVEKILFQGKSDYQKVMV 76
           D    S+V+ GWFSE                +PMWPGEAHSLKVEK+LF+ KSD+Q+V+V
Sbjct: 44  DAKCHSTVVSGWFSEPHPRSGKKGGKAVYFNNPMWPGEAHSLKVEKVLFKDKSDFQEVLV 103

Query: 77  FQSSTYGKVLVLDGVIQLTERDECAYQEMMTHLALCSIPNPXXXXXXXXXXXXXXREISR 136
           F+S+TYGKVLVLDG++QLTE+DECAYQEM+ HL LCSI +P              REISR
Sbjct: 104 FESATYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSISSPKNVLVVGGGDGGVLREISR 163

Query: 137 HSSVEKIDICEIDKMVVDVSKQFFPDVAVGFDDQRVTLRIGDGVAFLKEAPEGSYDAVIV 196
           HSSVE IDICEIDKMV+DVSK+FFP++AVGFDD RV L IGD   FL+++PEG YDA+IV
Sbjct: 164 HSSVEVIDICEIDKMVIDVSKKFFPELAVGFDDPRVQLHIGDAAEFLRKSPEGKYDAIIV 223

Query: 197 DSSDPIG 203
           DSSDP+G
Sbjct: 224 DSSDPVG 230


>AT5G53120.3 | Symbols: SPDS3, SPMS | spermidine synthase 3 |
           chr5:21535429-21537653 FORWARD LENGTH=359
          Length = 359

 Score =  241 bits (615), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 116/187 (62%), Positives = 140/187 (74%), Gaps = 15/187 (8%)

Query: 32  DGNGLSSVIPGWFSEI---------------SPMWPGEAHSLKVEKILFQGKSDYQKVMV 76
           D    S+V+ GWFSE                +PMWPGEAHSLKVEK+LF+ KSD+Q+V+V
Sbjct: 44  DAKCHSTVVSGWFSEPHPRSGKKGGKAVYFNNPMWPGEAHSLKVEKVLFKDKSDFQEVLV 103

Query: 77  FQSSTYGKVLVLDGVIQLTERDECAYQEMMTHLALCSIPNPXXXXXXXXXXXXXXREISR 136
           F+S+TYGKVLVLDG++QLTE+DECAYQEM+ HL LCSI +P              REISR
Sbjct: 104 FESATYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSISSPKNVLVVGGGDGGVLREISR 163

Query: 137 HSSVEKIDICEIDKMVVDVSKQFFPDVAVGFDDQRVTLRIGDGVAFLKEAPEGSYDAVIV 196
           HSSVE IDICEIDKMV+DVSK+FFP++AVGFDD RV L IGD   FL+++PEG YDA+IV
Sbjct: 164 HSSVEVIDICEIDKMVIDVSKKFFPELAVGFDDPRVQLHIGDAAEFLRKSPEGKYDAIIV 223

Query: 197 DSSDPIG 203
           DSSDP+G
Sbjct: 224 DSSDPVG 230


>AT5G53120.2 | Symbols: SPDS3, SPMS | spermidine synthase 3 |
           chr5:21535429-21537653 FORWARD LENGTH=359
          Length = 359

 Score =  241 bits (615), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 116/187 (62%), Positives = 140/187 (74%), Gaps = 15/187 (8%)

Query: 32  DGNGLSSVIPGWFSEI---------------SPMWPGEAHSLKVEKILFQGKSDYQKVMV 76
           D    S+V+ GWFSE                +PMWPGEAHSLKVEK+LF+ KSD+Q+V+V
Sbjct: 44  DAKCHSTVVSGWFSEPHPRSGKKGGKAVYFNNPMWPGEAHSLKVEKVLFKDKSDFQEVLV 103

Query: 77  FQSSTYGKVLVLDGVIQLTERDECAYQEMMTHLALCSIPNPXXXXXXXXXXXXXXREISR 136
           F+S+TYGKVLVLDG++QLTE+DECAYQEM+ HL LCSI +P              REISR
Sbjct: 104 FESATYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSISSPKNVLVVGGGDGGVLREISR 163

Query: 137 HSSVEKIDICEIDKMVVDVSKQFFPDVAVGFDDQRVTLRIGDGVAFLKEAPEGSYDAVIV 196
           HSSVE IDICEIDKMV+DVSK+FFP++AVGFDD RV L IGD   FL+++PEG YDA+IV
Sbjct: 164 HSSVEVIDICEIDKMVIDVSKKFFPELAVGFDDPRVQLHIGDAAEFLRKSPEGKYDAIIV 223

Query: 197 DSSDPIG 203
           DSSDP+G
Sbjct: 224 DSSDPVG 230


>AT5G53120.1 | Symbols: SPDS3, SPMS, ATSPDS3 | spermidine synthase 3
           | chr5:21535429-21537653 FORWARD LENGTH=359
          Length = 359

 Score =  241 bits (615), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 116/187 (62%), Positives = 140/187 (74%), Gaps = 15/187 (8%)

Query: 32  DGNGLSSVIPGWFSEI---------------SPMWPGEAHSLKVEKILFQGKSDYQKVMV 76
           D    S+V+ GWFSE                +PMWPGEAHSLKVEK+LF+ KSD+Q+V+V
Sbjct: 44  DAKCHSTVVSGWFSEPHPRSGKKGGKAVYFNNPMWPGEAHSLKVEKVLFKDKSDFQEVLV 103

Query: 77  FQSSTYGKVLVLDGVIQLTERDECAYQEMMTHLALCSIPNPXXXXXXXXXXXXXXREISR 136
           F+S+TYGKVLVLDG++QLTE+DECAYQEM+ HL LCSI +P              REISR
Sbjct: 104 FESATYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSISSPKNVLVVGGGDGGVLREISR 163

Query: 137 HSSVEKIDICEIDKMVVDVSKQFFPDVAVGFDDQRVTLRIGDGVAFLKEAPEGSYDAVIV 196
           HSSVE IDICEIDKMV+DVSK+FFP++AVGFDD RV L IGD   FL+++PEG YDA+IV
Sbjct: 164 HSSVEVIDICEIDKMVIDVSKKFFPELAVGFDDPRVQLHIGDAAEFLRKSPEGKYDAIIV 223

Query: 197 DSSDPIG 203
           DSSDP+G
Sbjct: 224 DSSDPVG 230


>AT5G53120.6 | Symbols: SPDS3 | spermidine synthase 3 |
           chr5:21535429-21537653 FORWARD LENGTH=386
          Length = 386

 Score =  228 bits (580), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 116/214 (54%), Positives = 140/214 (65%), Gaps = 42/214 (19%)

Query: 32  DGNGLSSVIPGWFSEI---------------SPMWPGEAHSLKVEKILFQGKSDYQKVMV 76
           D    S+V+ GWFSE                +PMWPGEAHSLKVEK+LF+ KSD+Q+V+V
Sbjct: 44  DAKCHSTVVSGWFSEPHPRSGKKGGKAVYFNNPMWPGEAHSLKVEKVLFKDKSDFQEVLV 103

Query: 77  FQSSTYGKVLVLDGVIQLTERDECAYQEMMTHLALCSIPNPXXXXXXXXXXXXX------ 130
           F+S+TYGKVLVLDG++QLTE+DECAYQEM+ HL LCSI +P                   
Sbjct: 104 FESATYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSISSPKNVISHLKKFSLSGFLYLV 163

Query: 131 ---------------------XREISRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFDD 169
                                 REISRHSSVE IDICEIDKMV+DVSK+FFP++AVGFDD
Sbjct: 164 ACCNKSVNLKVLVVGGGDGGVLREISRHSSVEVIDICEIDKMVIDVSKKFFPELAVGFDD 223

Query: 170 QRVTLRIGDGVAFLKEAPEGSYDAVIVDSSDPIG 203
            RV L IGD   FL+++PEG YDA+IVDSSDP+G
Sbjct: 224 PRVQLHIGDAAEFLRKSPEGKYDAIIVDSSDPVG 257


>AT5G19530.2 | Symbols: ACL5 | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr5:6589176-6591070 REVERSE LENGTH=332
          Length = 332

 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 82/146 (56%), Gaps = 1/146 (0%)

Query: 57  SLKVEKILFQGKSDYQKVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMMTHLALCSIPN 116
           S  +  +L QG S+YQ + +  +  +GKVLV+DG +Q  ERDE  Y E + H AL   PN
Sbjct: 40  SFALNSVLHQGTSEYQDIALLDTKRFGKVLVIDGKMQSAERDEFIYHECLIHPALLFHPN 99

Query: 117 PXXXXXXXXXXXXXXREISRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFDDQRVTLRI 176
           P              REI +H+++EK+ +C+ID+ VVD  ++F    +  F ++++ L I
Sbjct: 100 PKTVFIMGGGEGSAAREILKHTTIEKVVMCDIDQEVVDFCRRFLTVNSDAFCNKKLELVI 159

Query: 177 GDGVAFLKEAPEGSYDAVIVDSSDPI 202
            D  A L E  E  +D ++ D +DP+
Sbjct: 160 KDAKAEL-EKREEKFDIIVGDLADPV 184


>AT5G19530.1 | Symbols: ACL5 | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr5:6589176-6591091 REVERSE LENGTH=339
          Length = 339

 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 82/146 (56%), Gaps = 1/146 (0%)

Query: 57  SLKVEKILFQGKSDYQKVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMMTHLALCSIPN 116
           S  +  +L QG S+YQ + +  +  +GKVLV+DG +Q  ERDE  Y E + H AL   PN
Sbjct: 47  SFALNSVLHQGTSEYQDIALLDTKRFGKVLVIDGKMQSAERDEFIYHECLIHPALLFHPN 106

Query: 117 PXXXXXXXXXXXXXXREISRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFDDQRVTLRI 176
           P              REI +H+++EK+ +C+ID+ VVD  ++F    +  F ++++ L I
Sbjct: 107 PKTVFIMGGGEGSAAREILKHTTIEKVVMCDIDQEVVDFCRRFLTVNSDAFCNKKLELVI 166

Query: 177 GDGVAFLKEAPEGSYDAVIVDSSDPI 202
            D  A L E  E  +D ++ D +DP+
Sbjct: 167 KDAKAEL-EKREEKFDIIVGDLADPV 191