Miyakogusa Predicted Gene

Lj0g3v0252529.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0252529.1 tr|E1VJ34|E1VJ34_9GAMM Esterase A OS=gamma
proteobacterium HdN1 GN=HDN1F_12430 PE=4
SV=1,34.88,9e-17,Beta-lactamase,Beta-lactamase-related; no
description,Beta-lactamase/transpeptidase-like;
beta-lacta,CUFF.16568.1
         (375 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G24810.2 | Symbols:  | ABC1 family protein | chr5:8516902-852...   404   e-113
AT5G24810.1 | Symbols:  | ABC1 family protein | chr5:8516902-852...   404   e-113

>AT5G24810.2 | Symbols:  | ABC1 family protein | chr5:8516902-8522616
            REVERSE LENGTH=1040
          Length = 1040

 Score =  404 bits (1037), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 208/389 (53%), Positives = 254/389 (65%), Gaps = 40/389 (10%)

Query: 7    ENPLLMLDWDECLKRICMSVPETEPGKEQIYHYLSFGWLCGGIIEHASGKKFQEILEEAI 66
            ENPLL+ DWDECLKRI  S PETEPG +Q YHYL+FGWLCGGI+E+ASGKK QEILEE+I
Sbjct: 672  ENPLLICDWDECLKRIANSSPETEPGSQQSYHYLTFGWLCGGILEYASGKKLQEILEESI 731

Query: 67   VRPLHIEGELYIGIPPGVEARLAALTVDTDDLSKLSAIPTRPDLPSTFQPQQIARSATTL 126
            V+PL+I+GELYIGIPPGVE+RLA LT DTD++SKLS+I ++P+LPSTFQP +I + AT L
Sbjct: 732  VKPLNIDGELYIGIPPGVESRLATLTFDTDEMSKLSSIASQPELPSTFQPDKIIQMATNL 791

Query: 127  PAVFNTLHVRRAIIPAANGHLSXXXXXXXXXXXXDGGKIPPPHSSDSKPVLGSHPHIPKL 186
            P +FNTL+VRRAIIPAANGH S            DGG +PPPHSS S+P LGSH H+PK 
Sbjct: 792  PVLFNTLNVRRAIIPAANGHCSARALARYYATLADGGLVPPPHSSLSQPPLGSHTHVPKF 851

Query: 187  SS--------------------QKAPQNRKCFRRKEATLPSMSNTRSYEKVSSSENFEVS 226
            +S                     K  Q RK +  K+    S S   + E ++   +   S
Sbjct: 852  TSLKDTTKKKKGKEMAATEKGKSKDHQERKLYDEKQFMSASSSRESNTESLARLVDTNSS 911

Query: 227  EGRNTCRXXXXXXXXXXXXXXXXLRTCVPGKVYRNPRIIDEFLGAGECENLALPNGGFGL 286
             G+                            ++ NPRI D F+GAG+   L +P+G FGL
Sbjct: 912  AGKTEINSDDHQHDIH--------------NMFSNPRIHDAFMGAGDYSGLVVPDGKFGL 957

Query: 287  GFKRLSSNNGSSIAFGHSGMGGSTGFCDVTNRFAIAVTLNKMSFGGVSAKIVQLVCSELQ 346
            GFKR  S +GS + FGHSG+GGSTGFCD+ NRF+IAVTLNKMS GGV+A IV+LVCSEL 
Sbjct: 958  GFKRAISQDGSLVGFGHSGLGGSTGFCDINNRFSIAVTLNKMSMGGVTANIVKLVCSELN 1017

Query: 347  IPVPDDFLRFMAQQSGQDEQLSLGRPLIN 375
            IP+P DF    A   G D Q  +G PLIN
Sbjct: 1018 IPLPKDF----ATDIGADSQ--MGTPLIN 1040


>AT5G24810.1 | Symbols:  | ABC1 family protein | chr5:8516902-8522616
            REVERSE LENGTH=1009
          Length = 1009

 Score =  404 bits (1037), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 208/389 (53%), Positives = 254/389 (65%), Gaps = 40/389 (10%)

Query: 7    ENPLLMLDWDECLKRICMSVPETEPGKEQIYHYLSFGWLCGGIIEHASGKKFQEILEEAI 66
            ENPLL+ DWDECLKRI  S PETEPG +Q YHYL+FGWLCGGI+E+ASGKK QEILEE+I
Sbjct: 641  ENPLLICDWDECLKRIANSSPETEPGSQQSYHYLTFGWLCGGILEYASGKKLQEILEESI 700

Query: 67   VRPLHIEGELYIGIPPGVEARLAALTVDTDDLSKLSAIPTRPDLPSTFQPQQIARSATTL 126
            V+PL+I+GELYIGIPPGVE+RLA LT DTD++SKLS+I ++P+LPSTFQP +I + AT L
Sbjct: 701  VKPLNIDGELYIGIPPGVESRLATLTFDTDEMSKLSSIASQPELPSTFQPDKIIQMATNL 760

Query: 127  PAVFNTLHVRRAIIPAANGHLSXXXXXXXXXXXXDGGKIPPPHSSDSKPVLGSHPHIPKL 186
            P +FNTL+VRRAIIPAANGH S            DGG +PPPHSS S+P LGSH H+PK 
Sbjct: 761  PVLFNTLNVRRAIIPAANGHCSARALARYYATLADGGLVPPPHSSLSQPPLGSHTHVPKF 820

Query: 187  SS--------------------QKAPQNRKCFRRKEATLPSMSNTRSYEKVSSSENFEVS 226
            +S                     K  Q RK +  K+    S S   + E ++   +   S
Sbjct: 821  TSLKDTTKKKKGKEMAATEKGKSKDHQERKLYDEKQFMSASSSRESNTESLARLVDTNSS 880

Query: 227  EGRNTCRXXXXXXXXXXXXXXXXLRTCVPGKVYRNPRIIDEFLGAGECENLALPNGGFGL 286
             G+                            ++ NPRI D F+GAG+   L +P+G FGL
Sbjct: 881  AGKTEINSDDHQHDIH--------------NMFSNPRIHDAFMGAGDYSGLVVPDGKFGL 926

Query: 287  GFKRLSSNNGSSIAFGHSGMGGSTGFCDVTNRFAIAVTLNKMSFGGVSAKIVQLVCSELQ 346
            GFKR  S +GS + FGHSG+GGSTGFCD+ NRF+IAVTLNKMS GGV+A IV+LVCSEL 
Sbjct: 927  GFKRAISQDGSLVGFGHSGLGGSTGFCDINNRFSIAVTLNKMSMGGVTANIVKLVCSELN 986

Query: 347  IPVPDDFLRFMAQQSGQDEQLSLGRPLIN 375
            IP+P DF    A   G D Q  +G PLIN
Sbjct: 987  IPLPKDF----ATDIGADSQ--MGTPLIN 1009