Miyakogusa Predicted Gene
- Lj0g3v0252279.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0252279.2 tr|B9NH20|B9NH20_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_583791 PE=4
SV=1,33.67,8e-19,coiled-coil,NULL; PPR,Pentatricopeptide repeat;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; PPR,CUFF.16544.2
(252 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 108 4e-24
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 2e-23
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 7e-21
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 2e-20
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 2e-20
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 1e-18
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 2e-18
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 2e-18
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 2e-18
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 6e-18
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 6e-18
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 8e-18
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 2e-17
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 2e-17
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 2e-17
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 86 3e-17
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 4e-17
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 4e-17
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 4e-17
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 4e-17
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 5e-17
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 5e-17
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 85 5e-17
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 5e-17
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 9e-17
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 1e-16
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 1e-16
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 1e-16
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 1e-16
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 2e-16
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 2e-16
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 83 2e-16
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 2e-16
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 2e-16
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 2e-16
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 3e-16
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 3e-16
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 82 4e-16
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 6e-16
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 6e-16
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 6e-16
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 81 6e-16
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 8e-16
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 81 8e-16
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 1e-15
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 1e-15
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-15
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-15
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-15
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 79 2e-15
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-15
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 3e-15
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 3e-15
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 3e-15
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 4e-15
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 5e-15
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 7e-15
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 9e-15
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 9e-15
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 2e-14
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 2e-14
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 76 2e-14
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 76 3e-14
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 3e-14
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 4e-14
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 4e-14
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 6e-14
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 7e-14
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 73 2e-13
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 3e-13
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 3e-13
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 3e-13
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 3e-13
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 3e-13
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 72 3e-13
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 4e-13
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-12
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 69 2e-12
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 69 2e-12
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 69 3e-12
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 5e-12
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 5e-12
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 6e-12
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 7e-12
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 7e-12
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 8e-12
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 67 1e-11
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 1e-11
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 1e-11
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 1e-11
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 67 2e-11
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 67 2e-11
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 67 2e-11
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 2e-11
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 3e-11
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 3e-11
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 3e-11
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 4e-11
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 4e-11
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 5e-11
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 7e-11
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 8e-11
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 1e-10
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 64 1e-10
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 63 1e-10
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 3e-10
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 3e-10
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 8e-10
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 9e-10
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 9e-10
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 60 2e-09
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-09
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 4e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 4e-09
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 5e-09
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 6e-09
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 6e-09
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 6e-09
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 7e-09
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 58 8e-09
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 8e-09
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 8e-09
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 8e-09
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 8e-09
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 9e-09
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-08
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 3e-08
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 4e-08
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 4e-08
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 4e-08
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 4e-08
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 4e-08
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 4e-08
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 4e-08
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 4e-08
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 4e-08
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 4e-08
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 4e-08
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 6e-08
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 7e-08
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 8e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 54 9e-08
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 9e-08
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 9e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 9e-08
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 54 1e-07
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 1e-07
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 2e-07
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 53 2e-07
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 2e-07
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 2e-07
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 2e-07
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 2e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 52 3e-07
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 52 3e-07
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 52 4e-07
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 52 4e-07
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 52 4e-07
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 52 5e-07
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 52 5e-07
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 6e-07
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 6e-07
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 6e-07
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 7e-07
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 7e-07
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 7e-07
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 7e-07
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 7e-07
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 51 8e-07
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 8e-07
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 51 9e-07
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 9e-07
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 51 9e-07
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 9e-07
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 50 1e-06
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 50 1e-06
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 50 1e-06
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 3e-06
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 49 3e-06
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 5e-06
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 6e-06
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 7e-06
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 7e-06
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 8e-06
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 8e-06
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 8e-06
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 8e-06
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 9e-06
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 104/204 (50%), Gaps = 28/204 (13%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+ P Y++LI + + G ++ A++ +M G+ P+E TY+ L+D G ++A
Sbjct: 340 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+ + EM GFSP VVTYNALI+G+C G+ +A+ +L M E GL PD VS
Sbjct: 400 YRVLREMND-------NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVS 452
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKD-----------IWWLDENTRESLMKDL----- 232
YSTV+S F R+ ++ +A +K EM EK I E R DL
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 233 -----SDVDTYTSVMNDYFAEGSI 251
D TYT+++N Y EG +
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDL 536
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 84/155 (54%), Gaps = 14/155 (9%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI PD YS+LI G +Q R EA DL+ EM+R G+ PDE+TY+ L++ + G+ K
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGM-AEMGLPPDA 186
A LH+EM++K G P VVTY+ LI+G R EA +L + E +P D
Sbjct: 539 ALQLHNEMVEK-------GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSD- 590
Query: 187 VSYSTVIS-----WFHRNRELGKAYELKVEMDEKD 216
V+Y T+I F L K + +K M E D
Sbjct: 591 VTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEAD 625
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 112/254 (44%), Gaps = 46/254 (18%)
Query: 18 KASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGY 77
+A ++ +M+ G+TP+V TY +L G+ P+ Y
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV----RGLCPNERTY 383
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
+ L+ G Q+G ++EA + REM +G P TY+ L++ +TG+ A + ++M +
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443
Query: 138 KSLT-DFVT---------------------------GFSPFVVTYNALIHGYCFLGRFVE 169
K L+ D V+ G P +TY++LI G+C R E
Sbjct: 444 KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503
Query: 170 AMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLM 229
A + M +GLPPD +Y+ +I+ + +L KA +L EM EK +
Sbjct: 504 ACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV------------ 551
Query: 230 KDLSDVDTYTSVMN 243
L DV TY+ ++N
Sbjct: 552 --LPDVVTYSVLIN 563
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 7/147 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ P+ Y+ +I GL ++GR+ E + EM R G DE TY+ L+ G F +
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A +H EM++ G +P V+TY +LIH C G AM L M GL P+
Sbjct: 329 ALVMHAEMLRH-------GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER 381
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDE 214
+Y+T++ F + + +AY + EM++
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMND 408
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 86/163 (52%), Gaps = 9/163 (5%)
Query: 69 GILPDNNGYSALILGLYQQGR-LSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G +P Y+A++ + R +S A ++F+EM+ S V P+ +TY++L+ G
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L D+M K G P VVTYN LI GYC L + + +LR MA GL P+ +
Sbjct: 224 ALTLFDKMETK-------GCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLI 276
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMK 230
SY+ VI+ R + + + EM+ + + LDE T +L+K
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRG-YSLDEVTYNTLIK 318
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 11/196 (5%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
++A +V +M D+G +P+V TY L +G+ PD
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE----KGLSPDVVS 452
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
YS ++ G + + EAL + REMV G+ PD TYS L+ +A L++EM+
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+ G P TY ALI+ YC G +A+ + M E G+ PD V+YS +I+
Sbjct: 513 R-------VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565
Query: 197 HRNRELGKAYELKVEM 212
++ +A L +++
Sbjct: 566 NKQSRTREAKRLLLKL 581
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 25/156 (16%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCR------- 120
+G+LPD YS LI GL +Q R EA L ++ +P + TY L++ C
Sbjct: 549 KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSV 608
Query: 121 --------LTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMG 172
+ G ++A + + M+ K+ P YN +IHG+C G +A
Sbjct: 609 VSLIKGFCMKGMMTEADQVFESMLGKN-------HKPDGTAYNIMIHGHCRAGDIRKAYT 661
Query: 173 ILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYEL 208
+ + M + G V+ ++ H+ GK EL
Sbjct: 662 LYKEMVKSGFLLHTVTVIALVKALHKE---GKVNEL 694
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 89/149 (59%), Gaps = 8/149 (5%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSG-VLPDEYTYSLLMDTCRLTGEFSKA 128
++P+N Y+ I GL + G+L +A LF +++ S +PDEYTY++L+ C + G+ +KA
Sbjct: 715 LVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKA 774
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
F L DEM K G P +VTYNALI G C LG A +L + + G+ P+A++
Sbjct: 775 FTLRDEMALK-------GIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAIT 827
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDI 217
Y+T+I ++ + +A LK +M EK +
Sbjct: 828 YNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 76/142 (53%), Gaps = 9/142 (6%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSKAFHLHDEM 135
Y++LI G ++G + EA +F + ++ D++ Y +LMD CR TG+ A +HD M
Sbjct: 299 YTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCR-TGQIRDAVRVHDNM 357
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISW 195
I+ G N+LI+GYC G+ VEA I M + L PD +Y+T++
Sbjct: 358 IE-------IGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDG 410
Query: 196 FHRNRELGKAYELKVEMDEKDI 217
+ R + +A +L +M +K++
Sbjct: 411 YCRAGYVDEALKLCDQMCQKEV 432
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 9/141 (6%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSK 127
G+ + ++LI G + G+L EA +F M + PD +TY+ L+D CR G +
Sbjct: 361 GVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCR-AGYVDE 419
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L D+M QK + P V+TYN L+ GY +G F + + + + M + G+ D +
Sbjct: 420 ALKLCDQMCQKEVV-------PTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEI 472
Query: 188 SYSTVISWFHRNRELGKAYEL 208
S ST++ + + +A +L
Sbjct: 473 SCSTLLEALFKLGDFNEAMKL 493
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 85/203 (41%), Gaps = 15/203 (7%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
D+A K+ QM V PTV TY L G+ D
Sbjct: 418 DEALKLCDQMCQKEVVPTVMTYNIL----LKGYSRIGAFHDVLSLWKMMLKRGVNADEIS 473
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
S L+ L++ G +EA+ L+ ++ G+L D T ++++ + ++A
Sbjct: 474 CSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEA-------- 525
Query: 137 QKSLTDFVTGF--SPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
K + D V F P V TY AL HGY +G EA + M G+ P Y+T+IS
Sbjct: 526 -KEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLIS 584
Query: 195 WFHRNRELGKAYELKVEMDEKDI 217
+ R L K +L +E+ + +
Sbjct: 585 GAFKYRHLNKVADLVIELRARGL 607
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 22/160 (13%)
Query: 93 ALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSKAFHLHDEMIQKSLTDFVTGFSPFV 151
AL ++ +M+ V PD +T S++++ CR +G KA E T+ G V
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCR-SGNVDKAMVFAKE------TESSLGLELNV 261
Query: 152 VTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVE 211
VTYN+LI+GY +G +LR M+E G+ + V+Y+++I + + + +A +
Sbjct: 262 VTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFEL 321
Query: 212 MDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEGSI 251
+ EK + ++D Y +M+ Y G I
Sbjct: 322 LKEKKL--------------VADQHMYGVLMDGYCRTGQI 347
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI+P+ Y+ALI GL + G + A L ++ + G+ P+ TY+ L+D +G ++
Sbjct: 784 KGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAE 843
Query: 128 AFHLHDEMIQKSLT 141
A L ++MI+K L
Sbjct: 844 AMRLKEKMIEKGLV 857
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
P Y AL G Y+ G L EA + M R G+ P Y+ L ++G F K HL
Sbjct: 539 PAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTL-----ISGAF-KYRHL 592
Query: 132 HDEMIQKSLTDFVT-----GFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
+ + D V G +P V TY ALI G+C +G +A M E G+ +
Sbjct: 593 N------KVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNV 646
Query: 187 VSYSTVISWFHR 198
S + + R
Sbjct: 647 NICSKIANSLFR 658
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 81/145 (55%), Gaps = 7/145 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
GI D G+SAL+ G+ ++GR+ +A REM+R+G+ PD+ TY+++MD G+
Sbjct: 444 NGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQT 503
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
F L EM G P VVTYN L++G C LG+ A +L M +G+ PD +
Sbjct: 504 GFKLLKEMQSD-------GHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDI 556
Query: 188 SYSTVISWFHRNRELGKAYELKVEM 212
+Y+T++ HR+ K Y K E+
Sbjct: 557 TYNTLLEGHHRHANSSKRYIQKPEI 581
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 79/146 (54%), Gaps = 7/146 (4%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
PD YSALI L ++ ++ A LF EM + G++P++ ++ L+ GE L
Sbjct: 308 PDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEID----L 363
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
E QK L+ G P +V YN L++G+C G V A I+ GM GL PD ++Y+T
Sbjct: 364 MKESYQKMLS---KGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT 420
Query: 192 VISWFHRNRELGKAYELKVEMDEKDI 217
+I F R ++ A E++ EMD+ I
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGI 446
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 7/145 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ PD Y+ L+ G + G L A ++ M+R G+ PD+ TY+ L+D G+
Sbjct: 374 KGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVET 433
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + EM Q + GFS AL+ G C GR ++A LR M G+ PD V
Sbjct: 434 ALEIRKEMDQNGIELDRVGFS-------ALVCGMCKEGRVIDAERALREMLRAGIKPDDV 486
Query: 188 SYSTVISWFHRNRELGKAYELKVEM 212
+Y+ ++ F + + ++L EM
Sbjct: 487 TYTMMMDAFCKKGDAQTGFKLLKEM 511
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 82/178 (46%), Gaps = 28/178 (15%)
Query: 96 LFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYN 155
+ E++ +G + Y +++LM+ G S A + DE+ ++SL P VV++N
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSL-------QPTVVSFN 279
Query: 156 ALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEK 215
LI+GYC +G E + M + PD +YS +I+ + ++ A+ L EM ++
Sbjct: 280 TLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKR 339
Query: 216 --------------------DIWWLDENTRESLMKDLS-DVDTYTSVMNDYFAEGSIL 252
+I + E+ ++ L K L D+ Y +++N + G ++
Sbjct: 340 GLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLV 397
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 97/182 (53%), Gaps = 21/182 (11%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ D Y++L+ GL GR S+A L R+MV ++P+ T++ ++D G+FS+
Sbjct: 203 DGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSE 262
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L++EM ++ + P V TYN+LI+G C GR EA +L M G PD V
Sbjct: 263 AMKLYEEMTRRCV-------DPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVV 315
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFA 247
+Y+T+I+ F +++ + + +L EM ++ + + D TY +++ YF
Sbjct: 316 TYNTLINGFCKSKRVDEGTKLFREMAQRGL--------------VGDTITYNTIIQGYFQ 361
Query: 248 EG 249
G
Sbjct: 362 AG 363
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 79/146 (54%), Gaps = 7/146 (4%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF 129
I+P+ ++A+I ++G+ SEA+ L+ EM R V PD +TY+ L++ + G +A
Sbjct: 240 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 299
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
+ D M+ K G P VVTYN LI+G+C R E + R MA+ GL D ++Y
Sbjct: 300 QMLDLMVTK-------GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITY 352
Query: 190 STVISWFHRNRELGKAYELKVEMDEK 215
+T+I + + A E+ MD +
Sbjct: 353 NTIIQGYFQAGRPDAAQEIFSRMDSR 378
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 100/239 (41%), Gaps = 29/239 (12%)
Query: 1 MAFTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXX 60
+ FT+ I + K +A K+Y +M V P V TY +L
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 61 XXXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCR 120
+G LPD Y+ LI G + R+ E LFREM + G++ D TY+ ++
Sbjct: 305 MVT----KGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF 360
Query: 121 LTGEFSKAFHLHDEM---------------------IQKSLTDF----VTGFSPFVVTYN 155
G A + M ++K+L F + + TYN
Sbjct: 361 QAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN 420
Query: 156 ALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDE 214
+IHG C +G +A + R ++ GL PD VSY+T+IS F R R+ K+ L +M E
Sbjct: 421 IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 479
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 23/184 (12%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMD-TCRLTGEFSK 127
G PD S+LI G Q R+ +A+DL +M G PD Y+ ++D +C++ G +
Sbjct: 134 GYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKI-GLVND 192
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L D M + G VTYN+L+ G C GR+ +A ++R M + P+ +
Sbjct: 193 AVELFDRMERD-------GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFA 247
+++ VI F + + +A +L EM + + DV TY S++N
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD--------------PDVFTYNSLINGLCM 291
Query: 248 EGSI 251
G +
Sbjct: 292 HGRV 295
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 28/200 (14%)
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFH 130
LP +S ++ + + + LF M G+ D Y+Y+++++ F A
Sbjct: 66 LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 125
Query: 131 LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYS 190
+ +M++ G+ P VVT ++LI+G+C R +A+ ++ M EMG PD V Y+
Sbjct: 126 VVGKMMK-------FGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYN 178
Query: 191 TVISWFHRNRELGKAYELKVEMDEKDI------------------WWLDENT--RESLMK 230
T+I + + A EL M+ + W D R+ +M+
Sbjct: 179 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 238
Query: 231 DL-SDVDTYTSVMNDYFAEG 249
D+ +V T+T+V++ + EG
Sbjct: 239 DIVPNVITFTAVIDVFVKEG 258
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
P+ YS L+ GL R+ +AL LF M +S + D TY++++ G A+ L
Sbjct: 379 PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDL 438
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPP 184
+ K G P VV+Y +I G+C ++ ++ + R M E GL P
Sbjct: 439 FRSLSCK-------GLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 87/150 (58%), Gaps = 7/150 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GIL D Y+ L+ GL++ ++ +A ++FREM G+ PD ++Y +L++ G K
Sbjct: 586 QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQK 645
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + DEM+++ LT P V+ YN L+ G+C G +A +L M+ GL P+AV
Sbjct: 646 ASSIFDEMVEEGLT-------PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDI 217
+Y T+I + ++ +L +A+ L EM K +
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 87/201 (43%), Gaps = 11/201 (5%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
D A + +MI SG P V Y TL +GI PD
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKE----QGIAPDIFC 489
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y++LI+GL + R+ EA EMV +G+ P+ +TY + EF+ A EM
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+ G P V LI+ YC G+ +EA R M + G+ DA +Y+ +++
Sbjct: 550 E-------CGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602
Query: 197 HRNRELGKAYELKVEMDEKDI 217
+N ++ A E+ EM K I
Sbjct: 603 FKNDKVDDAEEIFREMRGKGI 623
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 100/235 (42%), Gaps = 25/235 (10%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
D+A +M+++G+ P TY G+LP+
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC----GVLPNKVL 559
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
+ LI ++G++ EA +R MV G+L D TY++LM+ + A + EM
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
K G +P V +Y LI+G+ LG +A I M E GL P+ + Y+ ++ F
Sbjct: 620 GK-------GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF 672
Query: 197 HRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEGSI 251
R+ E+ KA EL +DE + L N TY ++++ Y G +
Sbjct: 673 CRSGEIEKAKEL---LDEMSVKGLHPNAV-----------TYCTIIDGYCKSGDL 713
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G++P Y++LI G ++ + + +L EM + ++ YTY ++ +G+ A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+++ EMI +G P VV Y LI + RF +AM +L+ M E G+ PD
Sbjct: 437 YNIVKEMI-------ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489
Query: 189 YSTVISWFHRNRELGKAYELKVEMDE 214
Y+++I + + + +A VEM E
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVE 515
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 96/256 (37%), Gaps = 32/256 (12%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
+KA ++ MI SG+ P Y +L I+
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK----RNIVISPYT 419
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y ++ G+ G L A ++ +EM+ SG P+ Y+ L+ T F A + EM
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
++ G +P + YN+LI G R EA L M E GL P+A +Y IS +
Sbjct: 480 EQ-------GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Query: 197 HRNRELGKAYELKVEMDEKDIW--------WLDENTRESLMKD-------------LSDV 235
E A + EM E + ++E ++ + + L D
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA 592
Query: 236 DTYTSVMNDYFAEGSI 251
TYT +MN F +
Sbjct: 593 KTYTVLMNGLFKNDKV 608
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G++P Y LI GL + RL +A L EM GV D +TYSLL+D
Sbjct: 271 KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADA 330
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L EM+ + P++ Y+ I G +A + GM GL P A
Sbjct: 331 AKGLVHEMVSHGIN-----IKPYM--YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQ 383
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDI 217
+Y+++I + R + + + YEL VEM +++I
Sbjct: 384 AYASLIEGYCREKNVRQGYELLVEMKKRNI 413
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 36/235 (15%)
Query: 18 KASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGY 77
KAS ++ +M++ G+TP V Y L +G+ P+ Y
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV----KGLHPNAVTY 700
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
+I G + G L+EA LF EM G++PD + Y+ L+D C L+D ++
Sbjct: 701 CTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC---------CRLND--VE 749
Query: 138 KSLTDFVT---GFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGL----PPDAVSYS 190
+++T F T G + +NALI+ G+ +L + + P+ V+Y+
Sbjct: 750 RAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYN 809
Query: 191 TVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDY 245
+I + + L A EL +M ++ + V TYTS++N Y
Sbjct: 810 IMIDYLCKEGNLEAAKELFHQMQNANL--------------MPTVITYTSLLNGY 850
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF 129
++P Y++L+ G + GR +E +F E + +G+ PD YS++++ G +KA
Sbjct: 836 LMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKAL 895
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
L D+M K+ D G + T AL+ G+ +G A ++ M + PD+ +
Sbjct: 896 VLVDQMFAKNAVD--DGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATV 953
Query: 190 STVIS 194
+I+
Sbjct: 954 IELIN 958
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 7/110 (6%)
Query: 107 PDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGR 166
P++ TY++++D G A L +M +L P V+TY +L++GY +GR
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLM-------PTVITYTSLLNGYDKMGR 855
Query: 167 FVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKD 216
E + G+ PD + YS +I+ F + KA L +M K+
Sbjct: 856 RAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKN 905
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 83/150 (55%), Gaps = 7/150 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI PD Y++LI GL GR S+A + M + + PD +T++ L+D C G S+
Sbjct: 215 DGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSE 274
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A ++EMI++SL P +VTY+ LI+G C R EA + M G PD V
Sbjct: 275 AEEFYEEMIRRSL-------DPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVV 327
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDI 217
+YS +I+ + +++++ +L EM ++ +
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFS 126
+G PD YS LI G + ++ + LF EM + GV+ + TY++L+ CR G+ +
Sbjct: 320 KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCR-AGKLN 378
Query: 127 KAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
A + M+ G P ++TYN L+HG C G+ +A+ IL M + G+ D
Sbjct: 379 VAEEIFRRMV-------FCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADI 431
Query: 187 VSYSTVISWFHRNRELGKAYELKVEMDEK----DIW 218
V+Y+ +I + E+ A+++ ++ + DIW
Sbjct: 432 VTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIW 467
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 11/203 (5%)
Query: 15 KPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDN 74
+ D+A +++ M+ G P V TY L G++ +
Sbjct: 306 RLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ----RGVVRNT 361
Query: 75 NGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDE 134
Y+ LI G + G+L+ A ++FR MV GV P+ TY++L+ G+ KA + +
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421
Query: 135 MIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
M QK+ G +VTYN +I G C G +A I + GL PD +Y+T++
Sbjct: 422 M-QKN------GMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMML 474
Query: 195 WFHRNRELGKAYELKVEMDEKDI 217
++ +A L +M E I
Sbjct: 475 GLYKKGLRREADALFRKMKEDGI 497
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 24/183 (13%)
Query: 71 LPDNNGYSALILGLYQQ-GRLSEALDLFREMVRSGVLPDEYTY-SLLMDTCRLTGEFSKA 128
+P N ++L + + +LS AL +M++ G P T+ SLL CR A
Sbjct: 112 IPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCR-GDRVYDA 170
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
++ D+M+ G+ P VV YN +I G C + A+ +L M + G+ PD V+
Sbjct: 171 LYMFDQMVG-------MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVT 223
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAE 248
Y+++IS + A + M +++I+ DV T+ ++++ E
Sbjct: 224 YNSLISGLCSSGRWSDATRMVSCMTKREIY--------------PDVFTFNALIDACVKE 269
Query: 249 GSI 251
G +
Sbjct: 270 GRV 272
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 10/164 (6%)
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSKAF 129
LP +S L+ + + + + L+ +M G+ + T ++L++ CR + + S A
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCS-QLSLAL 136
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
+MI+ G P +VT+ +L++G+C R +A+ + M MG P+ V Y
Sbjct: 137 SFLGKMIK-------LGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIY 189
Query: 190 STVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLS 233
+T+I +++++ A +L M EKD D T SL+ L
Sbjct: 190 NTIIDGLCKSKQVDNALDLLNRM-EKDGIGPDVVTYNSLISGLC 232
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 108/249 (43%), Gaps = 25/249 (10%)
Query: 3 FTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXX 62
+ S IGL+ K +A + + +MI G+ P Y TL
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 63 XXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLT 122
I PD Y+A+I G Q G + EA LF EM G+ PD T++ L++
Sbjct: 379 S----RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKA 434
Query: 123 GEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGL 182
G AF +H+ MIQ G SP VVTY LI G C G A +L M ++GL
Sbjct: 435 GHMKDAFRVHNHMIQ-------AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 183 PPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVM 242
P+ +Y+++++ ++ + +A +L E + + +D TYT++M
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN--------------ADTVTYTTLM 533
Query: 243 NDYFAEGSI 251
+ Y G +
Sbjct: 534 DAYCKSGEM 542
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 12/212 (5%)
Query: 19 ASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYS 78
A +V+ MI +G +P V TY TL G+ P+ Y+
Sbjct: 440 AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI----GLQPNIFTYN 495
Query: 79 ALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQK 138
+++ GL + G + EA+ L E +G+ D TY+ LMD +GE KA + EM+ K
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 139 SLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHR 198
G P +VT+N L++G+C G + +L M G+ P+A ++++++ +
Sbjct: 556 -------GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 199 NRELGKAYELKVEMDEKDIWWLDENTRESLMK 230
L A + +M + + D T E+L+K
Sbjct: 609 RNNLKAATAIYKDMCSRGV-GPDGKTYENLVK 639
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 78/145 (53%), Gaps = 7/145 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ P++ Y ++I L + +L+EA + F EM+R G+LPD Y+ L+D G+
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A EM + +T P V+TY A+I G+C +G VEA + M GL PD+V
Sbjct: 370 ASKFFYEMHSRDIT-------PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 422
Query: 188 SYSTVISWFHRNRELGKAYELKVEM 212
+++ +I+ + + + A+ + M
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHM 447
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 23/185 (12%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSK 127
G+ + Y+ +I + Q GR+ EA L M G PD +YS +++ CR GE K
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRF-GELDK 299
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
+ L + M +K G P Y ++I C + + EA M G+ PD V
Sbjct: 300 VWKLIEVMKRK-------GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFA 247
Y+T+I F + ++ A + EM +DI DV TYT++++ +
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDI--------------TPDVLTYTAIISGFCQ 398
Query: 248 EGSIL 252
G ++
Sbjct: 399 IGDMV 403
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 23/164 (14%)
Query: 89 RLSEALDLFREMVRSGVLPDEYTYSLLMD-TCRLTGEFSKAFHLHDEMIQKSLTDFVTGF 147
+ + A+ +FRE GV + +Y++++ C+L G +A HL M K G+
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQL-GRIKEAHHLLLLMELK-------GY 277
Query: 148 SPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYE 207
+P V++Y+ +++GYC G + ++ M GL P++ Y ++I R +L +A E
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 208 LKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEGSI 251
EM + I L D YT++++ + G I
Sbjct: 338 AFSEMIRQGI--------------LPDTVVYTTLIDGFCKRGDI 367
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 70/169 (41%), Gaps = 11/169 (6%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
DKA ++ +M+ G+ PT+ T+ L +GI P+
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA----KGIAPNATT 598
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
+++L+ + L A ++++M GV PD TY L+ +A+ L EM
Sbjct: 599 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 658
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPD 185
K GFS V TY+ LI G+ +F+EA + M GL D
Sbjct: 659 GK-------GFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 108/249 (43%), Gaps = 25/249 (10%)
Query: 3 FTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXX 62
+ S IGL+ K +A + + +MI G+ P Y TL
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 63 XXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLT 122
I PD Y+A+I G Q G + EA LF EM G+ PD T++ L++
Sbjct: 379 S----RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKA 434
Query: 123 GEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGL 182
G AF +H+ MIQ G SP VVTY LI G C G A +L M ++GL
Sbjct: 435 GHMKDAFRVHNHMIQ-------AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 183 PPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVM 242
P+ +Y+++++ ++ + +A +L E + + +D TYT++M
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN--------------ADTVTYTTLM 533
Query: 243 NDYFAEGSI 251
+ Y G +
Sbjct: 534 DAYCKSGEM 542
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 12/212 (5%)
Query: 19 ASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYS 78
A +V+ MI +G +P V TY TL G+ P+ Y+
Sbjct: 440 AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI----GLQPNIFTYN 495
Query: 79 ALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQK 138
+++ GL + G + EA+ L E +G+ D TY+ LMD +GE KA + EM+ K
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 139 SLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHR 198
G P +VT+N L++G+C G + +L M G+ P+A ++++++ +
Sbjct: 556 -------GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 199 NRELGKAYELKVEMDEKDIWWLDENTRESLMK 230
L A + +M + + D T E+L+K
Sbjct: 609 RNNLKAATAIYKDMCSRGV-GPDGKTYENLVK 639
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 78/145 (53%), Gaps = 7/145 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ P++ Y ++I L + +L+EA + F EM+R G+LPD Y+ L+D G+
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A EM + +T P V+TY A+I G+C +G VEA + M GL PD+V
Sbjct: 370 ASKFFYEMHSRDIT-------PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 422
Query: 188 SYSTVISWFHRNRELGKAYELKVEM 212
+++ +I+ + + + A+ + M
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHM 447
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 23/185 (12%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSK 127
G+ + Y+ +I + Q GR+ EA L M G PD +YS +++ CR GE K
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRF-GELDK 299
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
+ L + M +K G P Y ++I C + + EA M G+ PD V
Sbjct: 300 VWKLIEVMKRK-------GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFA 247
Y+T+I F + ++ A + EM +DI DV TYT++++ +
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDI--------------TPDVLTYTAIISGFCQ 398
Query: 248 EGSIL 252
G ++
Sbjct: 399 IGDMV 403
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 23/164 (14%)
Query: 89 RLSEALDLFREMVRSGVLPDEYTYSLLMD-TCRLTGEFSKAFHLHDEMIQKSLTDFVTGF 147
+ + A+ +FRE GV + +Y++++ C+L G +A HL M K G+
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQL-GRIKEAHHLLLLMELK-------GY 277
Query: 148 SPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYE 207
+P V++Y+ +++GYC G + ++ M GL P++ Y ++I R +L +A E
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 208 LKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEGSI 251
EM + I L D YT++++ + G I
Sbjct: 338 AFSEMIRQGI--------------LPDTVVYTTLIDGFCKRGDI 367
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 70/169 (41%), Gaps = 11/169 (6%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
DKA ++ +M+ G+ PT+ T+ L +GI P+
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA----KGIAPNATT 598
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
+++L+ + L A ++++M GV PD TY L+ +A+ L EM
Sbjct: 599 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 658
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPD 185
K GFS V TY+ LI G+ +F+EA + M GL D
Sbjct: 659 GK-------GFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 25/233 (10%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
D ASK+ QM + G P + TY L G+ PD
Sbjct: 397 DIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLID----RGVSPDAAI 452
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ L+ GL + GR A LF EM+ +LPD Y Y+ L+D +G+F +A + +
Sbjct: 453 YNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSV 512
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+K G VV +NA+I G+C G EA+ + M E L PD +YST+I +
Sbjct: 513 EK-------GVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGY 565
Query: 197 HRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEG 249
+ +++ A ++ ++++N K +V TYTS++N + +G
Sbjct: 566 VKQQDMATAIKI--------FRYMEKN------KCKPNVVTYTSLINGFCCQG 604
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G++P+N Y+ LI + A L +M G PD TY +L+ ++G
Sbjct: 374 KGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDD 433
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A ++ ++I + G SP YN L+ G C GRF+ A + M + + PDA
Sbjct: 434 AVNMKVKLIDR-------GVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAY 486
Query: 188 SYSTVISWFHRN---RELGKAYELKVE 211
Y+T+I F R+ E K + L VE
Sbjct: 487 VYATLIDGFIRSGDFDEARKVFSLSVE 513
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 7/126 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ D ++A+I G + G L EAL M ++PD++TYS ++D + +
Sbjct: 514 KGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMAT 573
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + M + P VVTY +LI+G+C G F A + M L P+ V
Sbjct: 574 AIKIFRYMEKNKC-------KPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVV 626
Query: 188 SYSTVI 193
+Y+T+I
Sbjct: 627 TYTTLI 632
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 11/217 (5%)
Query: 1 MAFTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXX 60
+ + + IG + +K ++A+KV QM G+ P + TY TL
Sbjct: 304 VTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRD 363
Query: 61 XXXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCR 120
G+ P Y+ L+ G ++G S A + +EM G+ P + TY++L+DT
Sbjct: 364 LKS----RGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFA 419
Query: 121 LTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEM 180
+ KA L M + G P V TY+ LIHG+C G+ EA + + M E
Sbjct: 420 RSDNMEKAIQLRLSMEE-------LGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK 472
Query: 181 GLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDI 217
P+ V Y+T+I + + +A +L EM+EK++
Sbjct: 473 NCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 108/232 (46%), Gaps = 49/232 (21%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G++ + Y+ LI GL++ G + +++ +M GV P+ YTY+ +M+ G A
Sbjct: 228 GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDA 287
Query: 129 FHLHDEMIQKSLT-DFVT---------------------------GFSPFVVTYNALIHG 160
F + DEM ++ ++ + VT G +P ++TYN LI G
Sbjct: 288 FQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDG 347
Query: 161 YCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEK----- 215
+C +G+ +A+ + R + GL P V+Y+ ++S F R + A ++ EM+E+
Sbjct: 348 FCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPS 407
Query: 216 --------DIWWLDENTRESLMKDLS--------DVDTYTSVMNDYFAEGSI 251
D + +N +++ LS DV TY+ +++ + +G +
Sbjct: 408 KVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQM 459
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 22/181 (12%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G +P +N ++ L+ + ++ F E +S V+ D Y++ +L+ C GE K+
Sbjct: 124 GFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN-KSKVVLDVYSFGILIKGCCEAGEIEKS 182
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
F L E LT+F GFSP VV Y LI G C G +A + M ++GL + +
Sbjct: 183 FDLLIE-----LTEF--GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERT 235
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAE 248
Y+ +I+ +N + +E+ +M E ++ ++ TY VMN +
Sbjct: 236 YTVLINGLFKNGVKKQGFEMYEKMQEDGVF--------------PNLYTYNCVMNQLCKD 281
Query: 249 G 249
G
Sbjct: 282 G 282
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 13/133 (9%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTY-SLLMDTCRLTGEFSK 127
G++PD + YS LI G +G+++EA LF+ MV P+E Y ++++ C+ G +
Sbjct: 438 GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCK-EGSSYR 496
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L EM +K L +P V +Y +I C + EA ++ M + G+ P
Sbjct: 497 ALKLLKEMEEKEL-------APNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS-- 547
Query: 188 SYSTVISWFHRNR 200
++++S R +
Sbjct: 548 --TSILSLISRAK 558
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 7/148 (4%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF 129
++ D + LI G + G + ++ DL E+ G P+ Y+ L+D C GE KA
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
L EM + G TY LI+G G + + M E G+ P+ +Y
Sbjct: 219 DLFFEMGK-------LGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTY 271
Query: 190 STVISWFHRNRELGKAYELKVEMDEKDI 217
+ V++ ++ A+++ EM E+ +
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGV 299
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 79/154 (51%), Gaps = 16/154 (10%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFS--- 126
I PD Y+ L+ G + G LS A +++ EM+R G+ PD Y Y T R GE
Sbjct: 440 IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAY-----TTRAVGELRLGD 494
Query: 127 --KAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPP 184
KAF LH+EM+ TD +P + YN I G C +G V+A+ R + +GL P
Sbjct: 495 SDKAFRLHEEMVA---TDH---HAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVP 548
Query: 185 DAVSYSTVISWFHRNRELGKAYELKVEMDEKDIW 218
D V+Y+TVI + N + A L EM K ++
Sbjct: 549 DHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLY 582
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 14/167 (8%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G++PD+ Y+ +I G + G+ A +L+ EM+R + P TY +L+ G +A
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQA 604
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
F EM ++ G P V+T+NAL++G C G EA L M E G+PP+ S
Sbjct: 605 FQYSTEMKKR-------GVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYS 657
Query: 189 YSTVISW---FHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDL 232
Y+ +IS F + E+ K Y+ EM +K+I D T +L K L
Sbjct: 658 YTMLISKNCDFEKWEEVVKLYK---EMLDKEIEP-DGYTHRALFKHL 700
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 108/259 (41%), Gaps = 42/259 (16%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
+KAS VY MI+ G+ PTV T+ T+ I
Sbjct: 220 NKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKR----RNIEFSEVT 275
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ LI G + G++ EA +M RSG Y+++ L++ G F A+ + DEM+
Sbjct: 276 YNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEML 335
Query: 137 QK--------------SLTDF----------VTGFSPFVVTYNALIHGYCFLGRFVEAMG 172
+L DF + +P VV+YN L+HGY +G+FVEA
Sbjct: 336 NAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASL 395
Query: 173 ILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDL 232
+ + + P V+Y+T+I + L A LK EM + I+
Sbjct: 396 LFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIF-------------- 441
Query: 233 SDVDTYTSVMNDYFAEGSI 251
DV TYT+++ + G++
Sbjct: 442 PDVITYTTLVKGFVKNGNL 460
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 11/149 (7%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
GI P + Y+ I L GR+ +A RE++ S PD +Y+ LM G+F +A
Sbjct: 338 GIYPTTSTYNIYICALCDFGRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMGKFVEA 393
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L D++ + P +VTYN LI G C G A + M + PD ++
Sbjct: 394 SLLFDDLRAGDI-------HPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVIT 446
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDI 217
Y+T++ F +N L A E+ EM K I
Sbjct: 447 YTTLVKGFVKNGNLSMATEVYDEMLRKGI 475
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 95/179 (53%), Gaps = 21/179 (11%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ P+ YS+LI L GR S+A L +M+ + P+ T+S L+D G+ K
Sbjct: 282 KGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVK 341
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L++EMI++S+ P + TY++LI+G+C L R EA +L M P+ V
Sbjct: 342 AEKLYEEMIKRSI-------DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVV 394
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYF 246
+Y+T+I+ F + + + K EL EM ++ + + + TYT++++ +F
Sbjct: 395 TYNTLINGFCKAKRVDKGMELFREMSQRGL--------------VGNTVTYTTLIHGFF 439
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 7/149 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD ++L+ G R+S+A+ L +MV G PD T++ L+ L + S+A
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L D M+Q+ G P +VTY A+++G C G A+ +L M + + V
Sbjct: 203 VALIDRMVQR-------GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDI 217
YSTVI + R A L EM+ K +
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGV 284
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 23/179 (12%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFS 126
G PD Y A++ GL ++G AL+L +M + + + YS ++D+ C+ E
Sbjct: 212 RGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE-D 270
Query: 127 KAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
A +L EM K G P V+TY++LI C GR+ +A +L M E + P+
Sbjct: 271 DALNLFTEMENK-------GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 323
Query: 187 VSYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDY 245
V++S +I F + +L KA +L EM ++ I D N + TY+S++N +
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSI---DPN-----------IFTYSSLINGF 368
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 11/176 (6%)
Query: 18 KASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGY 77
KA K+Y +MI + P + TY +L + LP+ Y
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIR----KDCLPNVVTY 396
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
+ LI G + R+ + ++LFREM + G++ + TY+ L+ G F + +M+
Sbjct: 397 NTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH-----GFFQARDCDNAQMVF 451
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVI 193
K + G P ++TYN L+ G C G+ +AM + + + PD +Y+ +I
Sbjct: 452 KQMVS--VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 505
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 13/206 (6%)
Query: 1 MAFTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXX 60
+ ++S I + ++ + AS++ MI+ + P + T+ L
Sbjct: 289 ITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEE 348
Query: 61 XXXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCR 120
I P+ YS+LI G RL EA + M+R LP+ TY+ L++
Sbjct: 349 MIK----RSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFC 404
Query: 121 LTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVE-AMGILRGMAE 179
K L EM Q+ G VTY LIHG+ F R + A + + M
Sbjct: 405 KAKRVDKGMELFREMSQR-------GLVGNTVTYTTLIHGF-FQARDCDNAQMVFKQMVS 456
Query: 180 MGLPPDAVSYSTVISWFHRNRELGKA 205
+G+ P+ ++Y+ ++ +N +L KA
Sbjct: 457 VGVHPNILTYNILLDGLCKNGKLAKA 482
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSKAFHLHDEM 135
+S L+ + + + + +M G+ + YTY++L++ CR + L M
Sbjct: 81 FSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMM 140
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISW 195
G+ P +VT N+L++G+C R +A+ ++ M EMG PD V+++T+I
Sbjct: 141 --------KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHG 192
Query: 196 FHRNRELGKAYELKVEMDEK 215
+ + +A L M ++
Sbjct: 193 LFLHNKASEAVALIDRMVQR 212
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G++ + Y+ LI G +Q A +F++MV GV P+ TY++L+D G+ +K
Sbjct: 422 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 481
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGR 166
A + E +Q+S + P + TYN +I G C G+
Sbjct: 482 AMVVF-EYLQRSTME------PDIYTYNIMIEGMCKAGK 513
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Query: 99 EMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALI 158
+M++ G PD T + L++ S A L D+M++ G+ P VT+ LI
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVE-------MGYKPDTVTFTTLI 190
Query: 159 HGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDI 217
HG + EA+ ++ M + G PD V+Y V++ + + A L +M+ I
Sbjct: 191 HGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKI 249
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 82/155 (52%), Gaps = 11/155 (7%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+ I P+ YSAL+ + G++ EA +LF EMVR + PD TYS L++ L +
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 313
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + D M+ K G VV+YN LI+G+C R + M + R M++ GL + V
Sbjct: 314 ANQMFDLMVSK-------GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 188 SYSTVISWFHRNRELGKAYELKVEMD----EKDIW 218
+Y+T+I F + ++ KA E +MD DIW
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW 401
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 21/184 (11%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI P+ Y+AL+ GL R S+A L +M++ + P+ TYS L+D G+ +
Sbjct: 219 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L +EM++ S+ P +VTY++LI+G C R EA + M G D V
Sbjct: 279 AKELFEEMVRMSI-------DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVV 331
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFA 247
SY+T+I+ F + + + +L EM ++ + +S+ TY +++ +F
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGL--------------VSNTVTYNTLIQGFFQ 377
Query: 248 EGSI 251
G +
Sbjct: 378 AGDV 381
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 76/144 (52%), Gaps = 7/144 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD +L+ G ++ R+S+A+ L +MV G PD Y+ ++D+ T + A
Sbjct: 150 GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 209
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
F E+ +K G P VVTY AL++G C R+ +A +L M + + P+ ++
Sbjct: 210 FDFFKEIERK-------GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 189 YSTVISWFHRNRELGKAYELKVEM 212
YS ++ F +N ++ +A EL EM
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEM 286
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 12/187 (6%)
Query: 8 GLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXX 67
GL H + D+A++++ M+ G V +Y TL
Sbjct: 304 GLCLHD-RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ---- 358
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G++ + Y+ LI G +Q G + +A + F +M G+ PD +TY++L+ GE K
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + ++M QK D +VTY +I G C G+ EA + ++ GL PD V
Sbjct: 419 ALVIFEDM-QKREMDL------DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIV 471
Query: 188 SYSTVIS 194
+Y+T++S
Sbjct: 472 TYTTMMS 478
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 21/182 (11%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G L D Y+ LI G + R+ + + LFREM + G++ + TY+ L+ G+ K
Sbjct: 324 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 383
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A +M DF G SP + TYN L+ G C G +A+ I M + + D V
Sbjct: 384 AQEFFSQM------DFF-GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFA 247
+Y+TVI + ++ +A+ L + K + D+ TYT++M+
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLK--------------PDIVTYTTMMSGLCT 482
Query: 248 EG 249
+G
Sbjct: 483 KG 484
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 82/172 (47%), Gaps = 21/172 (12%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
P ++ L+ + + + + L ++M G+ D YT++++++ + S A +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
+M++ G+ P VT +L++G+C R +A+ ++ M E+G PD V+Y+
Sbjct: 143 LGKMLK-------LGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNA 195
Query: 192 VISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMN 243
+I + + + A++ E++ K I +V TYT+++N
Sbjct: 196 IIDSLCKTKRVNDAFDFFKEIERKGIR--------------PNVVTYTALVN 233
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 79/147 (53%), Gaps = 7/147 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G++P+ Y+ L+LG Q G+L+ A +LF+EMV GV P TY +L+D GE +K
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 473
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + ++M QKS G YN +IHG C + +A + +++ G+ PD V
Sbjct: 474 ALEIFEKM-QKSRMTLGIGI------YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 526
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDE 214
+Y+ +I + L +A L +M E
Sbjct: 527 TYNVMIGGLCKKGSLSEADMLFRKMKE 553
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 79/145 (54%), Gaps = 7/145 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
I+PD +SALI ++G+L EA +L+ EM+ G+ PD TY+ L+D +
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + D M+ K G P +VTY+ LI+ YC R + M + R ++ GL P+ +
Sbjct: 369 ANQMFDLMVSK-------GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTI 421
Query: 188 SYSTVISWFHRNRELGKAYELKVEM 212
+Y+T++ F ++ +L A EL EM
Sbjct: 422 TYNTLVLGFCQSGKLNAAKELFQEM 446
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 92/214 (42%), Gaps = 11/214 (5%)
Query: 1 MAFTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXX 60
+ ++S IG + + K D +K+ +MI + P V T+ L
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 61 XXXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCR 120
GI PD Y++LI G ++ L EA +F MV G PD TYS+L+++
Sbjct: 341 MIT----RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYC 396
Query: 121 LTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEM 180
L E+ K G P +TYN L+ G+C G+ A + + M
Sbjct: 397 KAKRVDDGMRLFREISSK-------GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR 449
Query: 181 GLPPDAVSYSTVISWFHRNRELGKAYELKVEMDE 214
G+PP V+Y ++ N EL KA E+ +M +
Sbjct: 450 GVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 483
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 84/183 (45%), Gaps = 21/183 (11%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD Y ++ L + G + ALDLFR+M + YS+++D+ G F A
Sbjct: 205 GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA 264
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L +EM K G VVTY++LI G C G++ + +LR M + PD V+
Sbjct: 265 LSLFNEMEMK-------GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 317
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAE 248
+S +I F + +L +A EL EM + I D TY S+++ + E
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIA--------------PDTITYNSLIDGFCKE 363
Query: 249 GSI 251
+
Sbjct: 364 NCL 366
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 13/218 (5%)
Query: 1 MAFTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXX 60
+ F++ I + K +A ++Y +MI G+ P TY +L
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 375
Query: 61 XXXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTY-SLLMDTC 119
+G PD YS LI + R+ + + LFRE+ G++P+ TY +L++ C
Sbjct: 376 MVS----KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 431
Query: 120 RLTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAE 179
+ +G+ + A L EM+ + G P VVTY L+ G C G +A+ I M +
Sbjct: 432 Q-SGKLNAAKELFQEMVSR-------GVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 483
Query: 180 MGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDI 217
+ Y+ +I ++ A+ L + +K +
Sbjct: 484 SRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV 521
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 104 GVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCF 163
G PD T+S L++ L G S+A L D M++ P +VT + LI+G C
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ-------RPDLVTVSTLINGLCL 187
Query: 164 LGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDI 217
GR EA+ ++ M E G PD V+Y V++ ++ A +L +M+E++I
Sbjct: 188 KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNI 241
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 92/179 (51%), Gaps = 21/179 (11%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI PD YS+LI L GR S+A L +M+ + P+ T++ L+D G+ +
Sbjct: 269 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIE 328
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L DEMIQ+S+ P +VTYN+LI+G+C R EA I M PD V
Sbjct: 329 AEKLFDEMIQRSI-------DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 381
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYF 246
+Y+T+I+ F + +++ EL +M + + + + TYT++++ +F
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGL--------------VGNTVTYTTLIHGFF 426
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 13/225 (5%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
D+A +++ M+ P V TY TL G++ +
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR----RGLVGNTVT 417
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ LI G +Q A +F++MV GV P+ TY+ L+D G+ KA + E +
Sbjct: 418 YTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF-EYL 476
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
QKS P + TYN + G C G+ + + ++ G+ PD ++Y+T+IS F
Sbjct: 477 QKS------KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGF 530
Query: 197 HRNRELGKAYELKVEMDEKDIWWLDENTRESLMK-DLSDVDTYTS 240
+ +AY L ++M E D D T +L++ L D D S
Sbjct: 531 CKKGLKEEAYTLFIKMKE-DGPLPDSGTYNTLIRAHLRDGDKAAS 574
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 21/169 (12%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
YS +I L + + +AL+LF EM G+ PD +TYS L+ G +S A L +M+
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
++ + +P VVT+N+LI + G+ +EA + M + + P+ V+Y+++I+ F
Sbjct: 303 ERKI-------NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Query: 197 HRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDY 245
+ L +A ++ M KD L DV TY +++N +
Sbjct: 356 CMHDRLDEAQQIFTLMVSKDC--------------LPDVVTYNTLINGF 390
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
++L+ G R+SEA+ L +MV G PD T++ L+ + S+A L + M+
Sbjct: 139 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMV- 197
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFH 197
V G P +VTY A+I+G C G A+ +L M + + D V YSTVI
Sbjct: 198 ------VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLC 251
Query: 198 RNRELGKAYELKVEMDEKDI 217
+ R + A L EMD K I
Sbjct: 252 KYRHVDDALNLFTEMDNKGI 271
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 28/177 (15%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD ++ L+ GL+Q + SEA+ L MV G PD TY +++ GE A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 129 FHLHDEM----IQKSLTDFVT------------------------GFSPFVVTYNALIHG 160
+L ++M I+ + + T G P V TY++LI
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 161 YCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDI 217
C GR+ +A +L M E + P+ V+++++I F + +L +A +L EM ++ I
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 7/145 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ P+ Y+ L+ GL + G+L +A+ +F + +S + PD YTY+++ + G+
Sbjct: 444 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED 503
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
+ L + K G P V+ YN +I G+C G EA + M E G PD+
Sbjct: 504 GWDLFCSLSLK-------GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSG 556
Query: 188 SYSTVISWFHRNRELGKAYELKVEM 212
+Y+T+I R+ + + EL EM
Sbjct: 557 TYNTLIRAHLRDGDKAASAELIKEM 581
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 42/159 (26%)
Query: 89 RLSEALDLFREMVRS-----------------------------------GVLPDEYTYS 113
+L EA+DLF EMV+S GV + YTY+
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 114 LLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGI 173
++++ + S A + +M++ G+ P +VT N+L++G+C R EA+ +
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMK-------LGYGPSIVTLNSLLNGFCHGNRISEAVAL 157
Query: 174 LRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEM 212
+ M EMG PD V+++T++ ++ + +A L M
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM 196
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 14/200 (7%)
Query: 16 PDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNN 75
P+KA K+ +M + GV P + TY TL G+ P+
Sbjct: 219 PEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMER----SGVAPNIV 274
Query: 76 GYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSKAFHLHDE 134
Y++ I G ++GR+ EA LFRE ++ V + TY+ L+D CR+ + +A L +
Sbjct: 275 TYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCRM-NDIDEALRLREV 332
Query: 135 MIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
M + GFSP VVTYN+++ C GR EA +L M+ + PD ++ +T+I+
Sbjct: 333 MESR-------GFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLIN 385
Query: 195 WFHRNRELGKAYELKVEMDE 214
+ + ++ A ++K +M E
Sbjct: 386 AYCKIEDMVSAVKVKKKMIE 405
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 7/146 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+ P + L+ L +Q +F++MV+ GV+ + + Y++L+ C +G+ KA
Sbjct: 163 GLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKA 222
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L EM +K G P + TYN LI YC EA+ + M G+ P+ V+
Sbjct: 223 EKLLSEMEEK-------GVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVT 275
Query: 189 YSTVISWFHRNRELGKAYELKVEMDE 214
Y++ I F R + +A L E+ +
Sbjct: 276 YNSFIHGFSREGRMREATRLFREIKD 301
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 9/151 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFS 126
G P Y++++ L + GR+ EA L EM + PD T + L++ C++ S
Sbjct: 336 RGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVS 395
Query: 127 KAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
A + +MI+ +G + +Y ALIHG+C + A L M E G P
Sbjct: 396 -AVKVKKKMIE-------SGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGY 447
Query: 187 VSYSTVISWFHRNRELGKAYELKVEMDEKDI 217
+YS ++ F+ + + +L E +++ +
Sbjct: 448 ATYSWLVDGFYNQNKQDEITKLLEEFEKRGL 478
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 83/150 (55%), Gaps = 7/150 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI P+ YS+LI L GR S+A L +M+ + PD +T+S L+D G+ +
Sbjct: 285 KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE 344
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L+DEM+++S+ P +VTY++LI+G+C R EA + M PD V
Sbjct: 345 AEKLYDEMVKRSI-------DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 397
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDI 217
+Y+T+I F + + + + E+ EM ++ +
Sbjct: 398 TYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 77/147 (52%), Gaps = 7/147 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G++ + Y+ LI GL+Q G A ++F+EMV GV P+ TY+ L+D G+ K
Sbjct: 425 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 484
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + E +Q+S + P + TYN +I G C G+ + + ++ G+ PD V
Sbjct: 485 AMVVF-EYLQRSKME------PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 537
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDE 214
+Y+T+IS F R +A L EM E
Sbjct: 538 AYNTMISGFCRKGSKEEADALFKEMKE 564
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 21/184 (11%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G P+ ++ LI GL+ + SEA+ L MV G PD TY ++++ G+ A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
F+L ++M Q L P V+ YN +I G C +A+ + + M G+ P+ V+
Sbjct: 241 FNLLNKMEQGKL-------EPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAE 248
YS++IS A L +M E+ I DV T++++++ + E
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKIN--------------PDVFTFSALIDAFVKE 339
Query: 249 GSIL 252
G ++
Sbjct: 340 GKLV 343
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 7/146 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
GI ++ YS LI ++ +L AL + +M++ G P+ T S L++ + S+A
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L D+M FVTG+ P VT+N LIHG + EAM ++ M G PD V+
Sbjct: 171 VALVDQM-------FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVT 223
Query: 189 YSTVISWFHRNRELGKAYELKVEMDE 214
Y V++ + + A+ L +M++
Sbjct: 224 YGVVVNGLCKRGDTDLAFNLLNKMEQ 249
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 7/149 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G P+ S+L+ G R+SEA+ L +M +G P+ T++ L+ L + S+A
Sbjct: 146 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 205
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L D M+ K G P +VTY +++G C G A +L M + L P +
Sbjct: 206 MALIDRMVAK-------GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDI 217
Y+T+I + + + A L EM+ K I
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGI 287
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 77/143 (53%), Gaps = 7/143 (4%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF 129
I PD +SALI ++G+L EA +L +EM++ G+ PD TY+ L+D + KA
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
H+ D M+ K G P + T+N LI+GYC + + + R M+ G+ D V+Y
Sbjct: 373 HMLDLMVSK-------GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY 425
Query: 190 STVISWFHRNRELGKAYELKVEM 212
+T+I F +L A EL EM
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEM 448
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 75/147 (51%), Gaps = 7/147 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD +S LI GL +GR+SEAL+L MV G P T + L++ L G+ S A
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L D M++ TGF P VTY ++ C G+ AM +LR M E + DAV
Sbjct: 197 VLLIDRMVE-------TGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEK 215
YS +I ++ L A+ L EM+ K
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 88/183 (48%), Gaps = 21/183 (11%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G P+ Y ++ + + G+ + A++L R+M + D YS+++D G A
Sbjct: 207 GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNA 266
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
F+L +EM + GF ++ Y LI G+C+ GR+ + +LR M + + PD V+
Sbjct: 267 FNLFNEM-------EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAE 248
+S +I F + +L +A EL EM ++ I D TYTS+++ + E
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGIS--------------PDTVTYTSLIDGFCKE 365
Query: 249 GSI 251
+
Sbjct: 366 NQL 368
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 7/129 (5%)
Query: 89 RLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVTGFS 148
+LS A ++++ G PD T+S L++ L G S+A L D M++ G
Sbjct: 122 KLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE-------MGHK 174
Query: 149 PFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYEL 208
P ++T NAL++G C G+ +A+ ++ M E G P+ V+Y V+ ++ + A EL
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 209 KVEMDEKDI 217
+M+E+ I
Sbjct: 235 LRKMEERKI 243
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 7/132 (5%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ LI G GR + L R+M++ + PD +S L+D G+ +A LH EMI
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI 344
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
Q+ G SP VTY +LI G+C + +A +L M G P+ +++ +I+ +
Sbjct: 345 QR-------GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397
Query: 197 HRNRELGKAYEL 208
+ + EL
Sbjct: 398 CKANLIDDGLEL 409
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 85/198 (42%), Gaps = 11/198 (5%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
DKA+ + M+ G P + T+ L G++ D
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL----RGVVADTVT 424
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ LI G + G+L A +LF+EMV V PD +Y +L+D GE KA + E I
Sbjct: 425 YNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF-EKI 483
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+KS + G YN +IHG C + +A + + G+ PD +Y+ +I
Sbjct: 484 EKSKMELDIGI------YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGL 537
Query: 197 HRNRELGKAYELKVEMDE 214
+ L +A L +M+E
Sbjct: 538 CKKGSLSEADLLFRKMEE 555
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
Query: 93 ALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVV 152
LDL ++M G+ + YT S++++ C + S AF ++I+ G+ P V
Sbjct: 91 VLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIK-------LGYEPDTV 143
Query: 153 TYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEM 212
T++ LI+G C GR EA+ ++ M EMG P ++ + +++ N ++ A L M
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203
Query: 213 DE 214
E
Sbjct: 204 VE 205
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 10/157 (6%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G+ PDN YS LI GL+ ++ EA+ + + R+G+LPD YTYS+++D C +
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
DEM+ K++ P V YN LI YC GR A+ + M G+ P++
Sbjct: 629 GQEFFDEMMSKNV-------QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENT 224
+Y+++I + + E K+ +E + L+ N
Sbjct: 682 TYTSLIKGMSI---ISRVEEAKLLFEEMRMEGLEPNV 715
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 86/163 (52%), Gaps = 8/163 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ PD ++ I + G++ EA+ LF +M +GV P+ T++ ++D + G + +
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
AF ++M+++ G P ++TY+ L+ G R +A +L+ M + G PP+ +
Sbjct: 314 AFMFKEKMVER-------GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVI 366
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMK 230
Y+ +I F L KA E+K M K + L +T +L+K
Sbjct: 367 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGL-SLTSSTYNTLIK 408
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 3 FTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXX 62
FT+ I K ++A K++ +M ++GV P V T+ T+
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322
Query: 63 XXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLT 122
G+ P YS L+ GL + R+ +A + +EM + G P+ Y+ L+D+
Sbjct: 323 E----RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
Query: 123 GEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGL 182
G +KA + D M+ K G S TYN LI GYC G+ A +L+ M +G
Sbjct: 379 GSLNKAIEIKDLMVSK-------GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 431
Query: 183 PPDAVSYSTVISWF 196
+ S+++VI
Sbjct: 432 NVNQGSFTSVICLL 445
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 8/166 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G + D Y+ LI G + +L EA EMV+ G+ PD YTYS+L+ + +
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A D+ + G P V TY+ +I G C R E M + P+ V
Sbjct: 594 AIQFWDDCKR-------NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTV 646
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLS 233
Y+ +I + R+ L A EL+ +M K I + T SL+K +S
Sbjct: 647 VYNHLIRAYCRSGRLSMALELREDMKHKGISP-NSATYTSLIKGMS 691
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 8/148 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ P + L+ L + + + F ++V GV PD Y ++ ++ G+ +
Sbjct: 220 KGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEE 278
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L +M + G +P VVT+N +I G GR+ EA M E G+ P +
Sbjct: 279 AVKLFSKMEE-------AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLI 331
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEK 215
+YS ++ R + +G AY + EM +K
Sbjct: 332 TYSILVKGLTRAKRIGDAYFVLKEMTKK 359
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
EG+ P+ Y+ALI G + G++ + L REM V P++ TY++++ G ++
Sbjct: 709 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 768
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEA 170
A L +EM +K G P +TY I+GY G +EA
Sbjct: 769 ASRLLNEMREK-------GIVPDSITYKEFIYGYLKQGGVLEA 804
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 10/157 (6%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G+ PDN YS LI GL+ ++ EA+ + + R+G+LPD YTYS+++D C +
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
DEM+ K++ P V YN LI YC GR A+ + M G+ P++
Sbjct: 629 GQEFFDEMMSKNV-------QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENT 224
+Y+++I + + E K+ +E + L+ N
Sbjct: 682 TYTSLIKGMSI---ISRVEEAKLLFEEMRMEGLEPNV 715
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 86/163 (52%), Gaps = 8/163 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ PD ++ I + G++ EA+ LF +M +GV P+ T++ ++D + G + +
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
AF ++M+++ G P ++TY+ L+ G R +A +L+ M + G PP+ +
Sbjct: 314 AFMFKEKMVER-------GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVI 366
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMK 230
Y+ +I F L KA E+K M K + L +T +L+K
Sbjct: 367 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGL-SLTSSTYNTLIK 408
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 3 FTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXX 62
FT+ I K ++A K++ +M ++GV P V T+ T+
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322
Query: 63 XXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLT 122
G+ P YS L+ GL + R+ +A + +EM + G P+ Y+ L+D+
Sbjct: 323 E----RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
Query: 123 GEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGL 182
G +KA + D M+ K G S TYN LI GYC G+ A +L+ M +G
Sbjct: 379 GSLNKAIEIKDLMVSK-------GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 431
Query: 183 PPDAVSYSTVISWF 196
+ S+++VI
Sbjct: 432 NVNQGSFTSVICLL 445
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 8/166 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G + D Y+ LI G + +L EA EMV+ G+ PD YTYS+L+ + +
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A D+ + G P V TY+ +I G C R E M + P+ V
Sbjct: 594 AIQFWDDCKR-------NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTV 646
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLS 233
Y+ +I + R+ L A EL+ +M K I + T SL+K +S
Sbjct: 647 VYNHLIRAYCRSGRLSMALELREDMKHKGISP-NSATYTSLIKGMS 691
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 8/148 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ P + L+ L + + + F ++V GV PD Y ++ ++ G+ +
Sbjct: 220 KGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEE 278
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L +M + G +P VVT+N +I G GR+ EA M E G+ P +
Sbjct: 279 AVKLFSKMEE-------AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLI 331
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEK 215
+YS ++ R + +G AY + EM +K
Sbjct: 332 TYSILVKGLTRAKRIGDAYFVLKEMTKK 359
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
EG+ P+ Y+ALI G + G++ + L REM V P++ TY++++ G ++
Sbjct: 709 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 768
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEA 170
A L +EM +K G P +TY I+GY G +EA
Sbjct: 769 ASRLLNEMREK-------GIVPDSITYKEFIYGYLKQGGVLEA 804
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+ P+ YS L+ ++G + +A+ + +M R G++P+EYTY+ L+D G S A
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 421
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
F L +EM+Q G VVTY ALI G C R EA + M G+ P+ S
Sbjct: 422 FRLGNEMLQ-------VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS 474
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDI 217
Y+ +I F + + + +A EL E+ + I
Sbjct: 475 YNALIHGFVKAKNMDRALELLNELKGRGI 503
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 12/222 (5%)
Query: 15 KPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDN 74
K D + + MI +G PTV TY + G++PD
Sbjct: 242 KTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF----RGLVPDT 297
Query: 75 NGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDE 134
Y+++I G + GRL + + F EM PD TY+ L++ G+ + E
Sbjct: 298 VTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYRE 357
Query: 135 MIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
M G P VV+Y+ L+ +C G +A+ M +GL P+ +Y+++I
Sbjct: 358 MKG-------NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Query: 195 WFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVD 236
+ L A+ L EM + + W + T +L+ L D +
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEW-NVVTYTALIDGLCDAE 451
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 97/236 (41%), Gaps = 26/236 (11%)
Query: 18 KASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGY 77
+A +++ +M +GV P + +Y L GI PD Y
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG----RGIKPDLLLY 510
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
I GL ++ A + EM G+ + Y+ LMD +G ++ HL DEM
Sbjct: 511 GTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM-- 568
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMA-EMGLPPDAVSYSTVISWF 196
K L VT VVT+ LI G C +A+ ++ + GL +A ++ +I
Sbjct: 569 KELDIEVT-----VVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGL 623
Query: 197 HRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEGSIL 252
++ ++ A L +M +K + + D YTS+M+ F +G++L
Sbjct: 624 CKDNQVEAATTLFEQMVQKGL--------------VPDRTAYTSLMDGNFKQGNVL 665
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+ + ++A+I GL + ++ A LF +MV+ G++PD Y+ LMD G +A
Sbjct: 608 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 667
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L D+M + G ++ Y +L+ G + +A L M G+ PD V
Sbjct: 668 LALRDKMAE-------IGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV- 719
Query: 189 YSTVISWFHRNRELG---KAYELK 209
IS ++ ELG +A EL+
Sbjct: 720 --LCISVLKKHYELGCIDEAVELQ 741
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 78/205 (38%), Gaps = 63/205 (30%)
Query: 71 LPDNNGYSALILGLYQQGRLSEALD----------------------------------- 95
+P + AL L G L EA+
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 96 LFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLT-DFVT------GFS 148
F++M+ +G P +TY++++D G+ A L +EM + L D VT GF
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308
Query: 149 ---------------------PFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
P V+TYNALI+ +C G+ + R M GL P+ V
Sbjct: 309 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 368
Query: 188 SYSTVISWFHRNRELGKAYELKVEM 212
SYST++ F + + +A + V+M
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDM 393
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 82/164 (50%), Gaps = 8/164 (4%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
P++ YS LI GL + GRL EA L +M G P TY++L+ G KAF+L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
DEMI + G P V TY LI G C G+ EA G+ R M + + P ++Y+
Sbjct: 324 FDEMIPR-------GCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNA 376
Query: 192 VISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDV 235
+I+ + ++ + A+EL M EK + T LM+ L V
Sbjct: 377 LINGYCKDGRVVPAFELLTVM-EKRACKPNVRTFNELMEGLCRV 419
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 89/182 (48%), Gaps = 21/182 (11%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G P+ + Y+ LI GL + G++ EA + R+MV+ + P TY+ L++ G
Sbjct: 330 RGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVP 389
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
AF L M +++ P V T+N L+ G C +G+ +A+ +L+ M + GL PD V
Sbjct: 390 AFELLTVMEKRAC-------KPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIV 442
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFA 247
SY+ +I R + AY+L M+ DI D T+T+++N +
Sbjct: 443 SYNVLIDGLCREGHMNTAYKLLSSMNCFDIE--------------PDCLTFTAIINAFCK 488
Query: 248 EG 249
+G
Sbjct: 489 QG 490
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 80/152 (52%), Gaps = 9/152 (5%)
Query: 80 LILGLYQQG-RLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQK 138
+IL + +G ++ E L + ++ + G++P TY+ L+D +G+ + +F + + M
Sbjct: 551 VILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELM--- 607
Query: 139 SLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHR 198
++G P V Y +I+G C GR EA +L M + G+ P+ V+Y+ ++ +
Sbjct: 608 ----KLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVN 663
Query: 199 NRELGKAYELKVEMDEKDIWWLDENTRESLMK 230
N +L +A E M E+ + L++ SL++
Sbjct: 664 NGKLDRALETVRAMVERG-YELNDRIYSSLLQ 694
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G++P Y+ L+ GL + G ++ + + M SG LP+ Y Y+++++ G +A
Sbjct: 576 GLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEA 635
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
E + ++ D +G SP VTY ++ GY G+ A+ +R M E G +
Sbjct: 636 -----EKLLSAMQD--SGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRI 688
Query: 189 YSTVISWF 196
YS+++ F
Sbjct: 689 YSSLLQGF 696
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 31/199 (15%)
Query: 77 YSALILGLYQQGRLSEALDLF-REMVRSGVLPDEYT-YSLLMDTCRLTGEFSKAFHLHDE 134
Y ++ L + G +EA ++F ++++ G + D + SLL+ CR +L D
Sbjct: 198 YRTIVNALCKNG-YTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCR-------GLNLRDA 249
Query: 135 MIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
+ + +P V+Y+ LIHG C +GR EA G+ M E G P +Y+ +I
Sbjct: 250 LKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIK 309
Query: 195 WFHRNRELGKAYELKVEMDEK-------------DIWWLDENTRES------LMKD--LS 233
+ KA+ L EM + D D E+ ++KD
Sbjct: 310 ALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFP 369
Query: 234 DVDTYTSVMNDYFAEGSIL 252
V TY +++N Y +G ++
Sbjct: 370 SVITYNALINGYCKDGRVV 388
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 11/217 (5%)
Query: 1 MAFTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXX 60
+ FTS I + ++A + QM++ G+ P V Y T+
Sbjct: 143 VTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQ 202
Query: 61 XXXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCR 120
GI PD Y++L+ GL GR +A L R M + + PD T++ L+D
Sbjct: 203 MENY----GIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 121 LTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEM 180
G+F A L++EMI+ S+ +P + TY +LI+G+C G EA + M
Sbjct: 259 KEGKFLDAEELYNEMIRMSI-------APNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311
Query: 181 GLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDI 217
G PD V+Y+++I+ F + +++ A ++ EM +K +
Sbjct: 312 GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 21/183 (11%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD +++LI G R+ EA+ + +MV G+ PD Y+ ++D+ G + A
Sbjct: 137 GFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYA 196
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L D+M G P VV Y +L++G C GR+ +A +LRGM + + PD ++
Sbjct: 197 LSLFDQMEN-------YGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAE 248
++ +I F + + A EL EM I ++ TYTS++N + E
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIA--------------PNIFTYTSLINGFCME 295
Query: 249 GSI 251
G +
Sbjct: 296 GCV 298
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 78/189 (41%), Gaps = 42/189 (22%)
Query: 89 RLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEM-IQKSLTDFVT-- 145
+ +EALDLF MV S LP ++ L++ +F +L D + I D T
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 146 -------------------------GFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEM 180
GF P +VT+ +LI+G+C R EAM ++ M EM
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 181 GLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTS 240
G+ PD V Y+T+I +N + A L +M+ I DV YTS
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIR--------------PDVVMYTS 217
Query: 241 VMNDYFAEG 249
++N G
Sbjct: 218 LVNGLCNSG 226
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 39/185 (21%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ + Y+ LI G Q G+ + A ++F MV GV P+ TY++L+ G+ K
Sbjct: 346 KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKK 405
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGIL------------- 174
A + ++M ++ + G +P + TYN L+HG C+ G+ +A+ +
Sbjct: 406 ALMIFEDMQKREMD----GVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGII 461
Query: 175 ------RGMAEMG-----------LP-----PDAVSYSTVISWFHRNRELGKAYELKVEM 212
+GM + G LP P+ V+Y+T+IS R +A+ L +M
Sbjct: 462 TYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Query: 213 DEKDI 217
E +
Sbjct: 522 KEDGV 526
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 14/202 (6%)
Query: 19 ASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYS 78
A ++Y +MI + P + TY +L +G PD Y+
Sbjct: 266 AEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMET----KGCFPDVVAYT 321
Query: 79 ALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQK 138
+LI G + ++ +A+ +F EM + G+ + TY+ L+ G+ + A + M+ +
Sbjct: 322 SLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR 381
Query: 139 SLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEM---GLPPDAVSYSTVISW 195
G P + TYN L+H C+ G+ +A+ I M + G+ P+ +Y+ ++
Sbjct: 382 -------GVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHG 434
Query: 196 FHRNRELGKAYELKVEMDEKDI 217
N +L KA + +M ++++
Sbjct: 435 LCYNGKLEKALMVFEDMRKREM 456
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 11/203 (5%)
Query: 3 FTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXX 62
+ + I + ++ + A ++ +M + G+ P V TY +L
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 63 XXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLT 122
I P+ +SALI ++G+L EA L+ EM++ + PD +TYS L++ +
Sbjct: 319 E----RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 374
Query: 123 GEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGL 182
+A H+ + MI K P VVTYN LI G+C R E M + R M++ GL
Sbjct: 375 DRLDEAKHMFELMISKDCF-------PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427
Query: 183 PPDAVSYSTVISWFHRNRELGKA 205
+ V+Y+T+I F + RE A
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNA 450
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 7/145 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+LPD YS L+ GL G++ AL +F + RS + PD YTY+++++ G+
Sbjct: 460 DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
+ L + K G P VVTY ++ G+C G EA + R M E G PD+
Sbjct: 520 GWDLFCSLSLK-------GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSG 572
Query: 188 SYSTVISWFHRNRELGKAYELKVEM 212
+Y+T+I R+ + + EL EM
Sbjct: 573 TYNTLIRAHLRDGDKAASAELIREM 597
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 42/205 (20%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD+ ++ LI GL++ R SEA+ L MV G PD TY ++++ G+ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 129 FHLHDEMIQ--------------------KSLTDFVT--------GFSPFVVTYNALIHG 160
L +M Q K++ D + G P VVTYN+LI
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 161 YCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDIWWL 220
C GR+ +A +L M E + P+ V++S +I F + +L +A +L EM ++ I
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID-- 358
Query: 221 DENTRESLMKDLSDVDTYTSVMNDY 245
D+ TY+S++N +
Sbjct: 359 ------------PDIFTYSSLINGF 371
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 88/199 (44%), Gaps = 11/199 (5%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
D+A ++ MI P V TY TL G++ +
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ----RGLVGNTVT 433
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ LI G +Q A +F++MV GVLPD TYS+L+D G+ A + E +
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVF-EYL 492
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
Q+S P + TYN +I G C G+ + + ++ G+ P+ V+Y+T++S F
Sbjct: 493 QRS------KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 546
Query: 197 HRNRELGKAYELKVEMDEK 215
R +A L EM E+
Sbjct: 547 CRKGLKEEADALFREMKEE 565
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 7/149 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD ++L+ G R+S+A+ L +MV G PD +T++ L+ S+A
Sbjct: 146 GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEA 205
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L D M+ V G P +VTY +++G C G A+ +L+ M + + P V
Sbjct: 206 VALVDRMV-------VKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDI 217
Y+T+I + + A L EMD K I
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGI 287
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 71/133 (53%), Gaps = 9/133 (6%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSKAFHLHDEM 135
+S L+ + + + + L +M G+ + YTYS+L++ CR + + S A + +M
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRS-QLSLALAVLAKM 142
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISW 195
++ G+ P +VT N+L++G+C R +A+ ++ M EMG PD+ +++T+I
Sbjct: 143 MK-------LGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHG 195
Query: 196 FHRNRELGKAYEL 208
R+ +A L
Sbjct: 196 LFRHNRASEAVAL 208
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 7/126 (5%)
Query: 89 RLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVTGFS 148
+L +A++LF +MV+S P +S L+ +F L ++M G S
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN-------LGIS 113
Query: 149 PFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYEL 208
+ TY+ LI+ +C + A+ +L M ++G PD V+ +++++ F + A L
Sbjct: 114 HNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSL 173
Query: 209 KVEMDE 214
+M E
Sbjct: 174 VGQMVE 179
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 83/143 (58%), Gaps = 7/143 (4%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF 129
I+P+ ++ L+ ++G+L EA +L++EM+ G+ P+ TY+ LMD + S+A
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
++ D M++ SP +VT+ +LI GYC + R + M + R +++ GL +AV+Y
Sbjct: 354 NMLDLMVRNKC-------SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTY 406
Query: 190 STVISWFHRNRELGKAYELKVEM 212
S ++ F ++ ++ A EL EM
Sbjct: 407 SILVQGFCQSGKIKLAEELFQEM 429
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 80/174 (45%), Gaps = 30/174 (17%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G++ + YS L+ G Q G++ A +LF+EMV GVLPD TY +L+D G+ K
Sbjct: 397 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 456
Query: 128 AFHLHDEMIQKSLTDF-----------------------------VTGFSPFVVTYNALI 158
A + +++ QKS D G P V+TY +I
Sbjct: 457 ALEIFEDL-QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Query: 159 HGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEM 212
G C G EA +LR M E G P+ +Y+T+I R+ +L + +L EM
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 7/150 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G PD Y++++ G+ + G S ALDL R+M V D +TYS ++D+ G
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L EM K G VVTYN+L+ G C G++ + +L+ M + P+ +
Sbjct: 247 AISLFKEMETK-------GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 299
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDI 217
+++ ++ F + +L +A EL EM + I
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGI 329
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 7/129 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI Y++L+ GL + G+ ++ L ++MV ++P+ T+++L+D G+ +
Sbjct: 257 KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE 316
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L+ EMI + G SP ++TYN L+ GYC R EA +L M PD V
Sbjct: 317 ANELYKEMITR-------GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 188 SYSTVISWF 196
+++++I +
Sbjct: 370 TFTSLIKGY 378
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 7/125 (5%)
Query: 93 ALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVV 152
A + ++++ G PD T++ L+ L G+ S+A L D M++ G P VV
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE-------NGCQPDVV 194
Query: 153 TYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEM 212
TYN++++G C G A+ +LR M E + D +YST+I R+ + A L EM
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254
Query: 213 DEKDI 217
+ K I
Sbjct: 255 ETKGI 259
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 11/194 (5%)
Query: 15 KPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDN 74
K +A+++Y +MI G++P + TY TL PD
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS----PDI 368
Query: 75 NGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDE 134
+++LI G R+ + + +FR + + G++ + TYS+L+ +G+ A L E
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428
Query: 135 MIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
M+ G P V+TY L+ G C G+ +A+ I + + + V Y+T+I
Sbjct: 429 MVSH-------GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 195 WFHRNRELGKAYEL 208
+ ++ A+ L
Sbjct: 482 GMCKGGKVEDAWNL 495
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 89/182 (48%), Gaps = 23/182 (12%)
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSKAF 129
LP +S + + + + LD +++ +G+ + YT +++++ CR + A+
Sbjct: 85 LPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCC-KTCFAY 143
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
+ ++++ G+ P T+N LI G G+ EA+ ++ M E G PD V+Y
Sbjct: 144 SVLGKVMK-------LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTY 196
Query: 190 STVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEG 249
+++++ R+ + A +L +M+E+++ +DV TY+++++ +G
Sbjct: 197 NSIVNGICRSGDTSLALDLLRKMEERNVK--------------ADVFTYSTIIDSLCRDG 242
Query: 250 SI 251
I
Sbjct: 243 CI 244
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI PD YS +I + GR ++A L R+M+ + PD T+S L++ G+ S+
Sbjct: 105 KGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSE 164
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A ++ +M+++ G P +TYN++I G+C R +A +L MA PD V
Sbjct: 165 AEEIYGDMLRR-------GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVV 217
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDI 217
++ST+I+ + + + + E+ EM + I
Sbjct: 218 TFSTLINGYCKAKRVDNGMEIFCEMHRRGI 247
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 7/139 (5%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF 129
I PD +SALI L ++G++SEA +++ +M+R G+ P TY+ ++D + A
Sbjct: 142 INPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAK 201
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
+ D M KS SP VVT++ LI+GYC R M I M G+ + V+Y
Sbjct: 202 RMLDSMASKSC-------SPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTY 254
Query: 190 STVISWFHRNRELGKAYEL 208
+T+I F + +L A +L
Sbjct: 255 TTLIHGFCQVGDLDAAQDL 273
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 25/183 (13%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD ++ L+ GL +GR+ +AL L MV G P Y +++ G+ A
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+L +M + T VV YNA+I C G + A + M + G+ PD ++
Sbjct: 61 LNLLSKMEE-------THIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVIT 113
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAE 248
YS +I F R+ A +L +M E+ I DV T+++++N E
Sbjct: 114 YSGMIDSFCRSGRWTDAEQLLRDMIERQIN--------------PDVVTFSALINALVKE 159
Query: 249 GSI 251
G +
Sbjct: 160 GKV 162
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 21/182 (11%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI P+ YS+LI L GR S+A L +M+ + P+ T++ L+D G+F +
Sbjct: 289 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 348
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L+D+MI++S+ P + TYN+L++G+C R +A + M PD V
Sbjct: 349 AEKLYDDMIKRSI-------DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 401
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFA 247
+Y+T+I F +++ + EL EM + + + D TYT+++ F
Sbjct: 402 TYNTLIKGFCKSKRVEDGTELFREMSHRGL--------------VGDTVTYTTLIQGLFH 447
Query: 248 EG 249
+G
Sbjct: 448 DG 449
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 91/225 (40%), Gaps = 34/225 (15%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
DKA +++ M+ P V TY TL G++ D
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSH----RGLVGDTVT 437
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ LI GL+ G A +F++MV GV PD TYS+L+D G+ KA + D M
Sbjct: 438 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM- 496
Query: 137 QKSLTDF-----------------------------VTGFSPFVVTYNALIHGYCFLGRF 167
QKS + G P VVTYN +I G C
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 168 VEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEM 212
EA +L+ M E G P++ +Y+T+I R+ + + EL EM
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 11/218 (5%)
Query: 1 MAFTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXX 60
+ FT+ I +F K +A + +M+ G P + TY +
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNK 250
Query: 61 XXXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCR 120
++ ++ +I L + + +AL+LF+EM G+ P+ TYS L+
Sbjct: 251 MEAAKIEADVVI----FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 121 LTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEM 180
G +S A L +MI+K + +P +VT+NALI + G+FVEA + M +
Sbjct: 307 SYGRWSDASQLLSDMIEKKI-------NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 181 GLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDIW 218
+ PD +Y+++++ F + L KA ++ M KD +
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 397
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
S+L+ G R+S+A+ L +MV G PD T++ L+ L + S+A L D M+Q
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFH 197
+ G P +VTY +++G C G A+ +L M + D V ++T+I
Sbjct: 219 R-------GCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLC 271
Query: 198 RNRELGKAYELKVEMDEKDI 217
+ R + A L EM+ K I
Sbjct: 272 KYRHVDDALNLFKEMETKGI 291
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 28/177 (15%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD ++ LI GL+ + SEA+ L MV+ G P+ TY ++++ G+ A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 129 FHLHDEM----IQKSLTDFVT------------------------GFSPFVVTYNALIHG 160
+L ++M I+ + F T G P VVTY++LI
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 161 YCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDI 217
C GR+ +A +L M E + P+ V+++ +I F + + +A +L +M ++ I
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 90/232 (38%), Gaps = 46/232 (19%)
Query: 18 KASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGY 77
+A K+Y MI + P + TY +L + PD Y
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS----KDCFPDVVTY 403
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
+ LI G + R+ + +LFREM G++ D TY+ L+ G+ A + +M+
Sbjct: 404 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 463
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGI-------------------LRGMA 178
G P ++TY+ L+ G C G+ +A+ + + GM
Sbjct: 464 D-------GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 516
Query: 179 EM----------------GLPPDAVSYSTVISWFHRNRELGKAYELKVEMDE 214
+ G+ P+ V+Y+T+IS R L +AY L +M E
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 76/146 (52%), Gaps = 9/146 (6%)
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSKAF 129
LP ++ L+ + + + + L +M R ++ YTY++L++ CR + + S A
Sbjct: 82 LPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRS-QISLAL 140
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
L +M++ G+ P +VT ++L++GYC R +A+ ++ M EMG PD +++
Sbjct: 141 ALLGKMMK-------LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITF 193
Query: 190 STVISWFHRNRELGKAYELKVEMDEK 215
+T+I + + +A L M ++
Sbjct: 194 TTLIHGLFLHNKASEAVALVDRMVQR 219
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 91/182 (50%), Gaps = 21/182 (11%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI P+ YS+LI L GR S+A L +M+ + P+ T++ L+D G+F +
Sbjct: 214 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 273
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A LHD+MI++S+ P + TYN+LI+G+C R +A + M PD
Sbjct: 274 AEKLHDDMIKRSI-------DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLD 326
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFA 247
+Y+T+I F +++ + EL EM + + + D TYT+++ F
Sbjct: 327 TYNTLIKGFCKSKRVEDGTELFREMSHRGL--------------VGDTVTYTTLIQGLFH 372
Query: 248 EG 249
+G
Sbjct: 373 DG 374
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 92/225 (40%), Gaps = 34/225 (15%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
DKA +++ M+ P +DTY TL G++ D
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH----RGLVGDTVT 362
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ LI GL+ G A +F++MV GV PD TYS+L+D G+ KA + D M
Sbjct: 363 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM- 421
Query: 137 QKSLTDF-----------------------------VTGFSPFVVTYNALIHGYCFLGRF 167
QKS + G P VVTYN +I G C
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481
Query: 168 VEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEM 212
EA +L+ M E G PD+ +Y+T+I R+ + + EL EM
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 84/154 (54%), Gaps = 8/154 (5%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
++ +I L + + +AL+LF+EM G+ P+ TYS L+ G +S A L +MI
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+K + +P +VT+NALI + G+FVEA + M + + PD +Y+++I+ F
Sbjct: 248 EKKI-------NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 197 HRNRELGKAYELKVEMDEKDIWWLDENTRESLMK 230
+ L KA ++ M KD + D +T +L+K
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFP-DLDTYNTLIK 333
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 42/205 (20%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD ++ LI GL+ + SEA+ L MV+ G P+ TY ++++ G+ A
Sbjct: 110 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 169
Query: 129 FHLHDEM----IQKSLTDFVT------------------------GFSPFVVTYNALIHG 160
F+L ++M I+ + F T G P VVTY++LI
Sbjct: 170 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229
Query: 161 YCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDIWWL 220
C GR+ +A +L M E + P+ V+++ +I F + + +A +L +M ++ I
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID-- 287
Query: 221 DENTRESLMKDLSDVDTYTSVMNDY 245
D+ TY S++N +
Sbjct: 288 ------------PDIFTYNSLINGF 300
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 77/146 (52%), Gaps = 9/146 (6%)
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSKAF 129
LP ++ L+ + + + + L +M R G+ + YTY++L++ CR + + S A
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS-QISLAL 65
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
L +M++ G+ P +VT ++L++GYC R +A+ ++ M EMG PD +++
Sbjct: 66 ALLGKMMK-------LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITF 118
Query: 190 STVISWFHRNRELGKAYELKVEMDEK 215
+T+I + + +A L M ++
Sbjct: 119 TTLIHGLFLHNKASEAVALVDRMVQR 144
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 42/178 (23%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
PD + Y+ LI G + R+ + +LFREM G++ D TY+ L+ G+ A +
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGI------------------ 173
+M+ G P ++TY+ L+ G C G+ +A+ +
Sbjct: 383 FKQMVSD-------GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 435
Query: 174 -LRGMAEM----------------GLPPDAVSYSTVISWFHRNRELGKAYELKVEMDE 214
+ GM + G+ P+ V+Y+T+IS R L +AY L +M E
Sbjct: 436 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 493
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 7/141 (4%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ LI ++ ++S AL L +M++ G P T S L++ S A L D+M+
Sbjct: 48 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 107
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+ G+ P +T+ LIHG + EA+ ++ M + G P+ V+Y V++
Sbjct: 108 E-------MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 160
Query: 197 HRNRELGKAYELKVEMDEKDI 217
+ ++ A+ L +M+ I
Sbjct: 161 CKRGDIDLAFNLLNKMEAAKI 181
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 18 KASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGY 77
+A ++ QM++ G+TP V T+ TL +G+ D Y
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVG----KGLHIDVVTY 264
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
++ G+ + G AL+L +M + + PD YS ++D G S A +L EM++
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFH 197
K G +P V TYN +I G+C GR+ +A +LR M E + PD ++++ +IS
Sbjct: 325 K-------GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377
Query: 198 RNRELGKAYELKVEMDEKDIW 218
+ +L +A +L EM + I+
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIF 398
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 79/169 (46%), Gaps = 24/169 (14%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI P+ Y+ +I G GR S+A L R+M+ + PD T++ L+ G+ +
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 128 AFHLHDEMIQKSL-TDFVT------GF-----------------SPFVVTYNALIHGYCF 163
A L DEM+ + + D VT GF SP VVT+N +I YC
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCR 444
Query: 164 LGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEM 212
R E M +LR ++ GL + +Y+T+I F L A +L EM
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 27/149 (18%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD ++ L+ GL + R+SEAL LF MV +G F +A
Sbjct: 171 GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG--------------------FLEA 210
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L D+M++ G +P V+T+N LI+G C GR +EA ++ M GL D V+
Sbjct: 211 VALFDQMVE-------IGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDI 217
Y T+++ + + A L +M+E I
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHI 292
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 7/129 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G++ + Y+ LI G + L+ A DLF+EM+ GV PD T ++L+ + +
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L E+IQ S D T V YN +IHG C + EA + + G+ PD
Sbjct: 521 ALELF-EVIQMSKIDLDT------VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 188 SYSTVISWF 196
+Y+ +IS F
Sbjct: 574 TYNVMISGF 582
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 26/164 (15%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTY-SLLMDTCRLTGEFSKA 128
I PD ++ALI ++G+L EA L EM+ + PD TY S++ C+ F A
Sbjct: 362 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK-HNRFDDA 420
Query: 129 FHLHDEMIQKSLTDFVT------------------------GFSPFVVTYNALIHGYCFL 164
H+ D M + F T G TYN LIHG+C +
Sbjct: 421 KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Query: 165 GRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYEL 208
A + + M G+ PD ++ + ++ F N +L +A EL
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 21/182 (11%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI P+ Y++LI L GR S+A L M+ + P+ T++ L+D G+ +
Sbjct: 287 KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVE 346
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A LH+EMIQ+S+ P +TYN LI+G+C R EA + + M P+
Sbjct: 347 AEKLHEEMIQRSI-------DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ 399
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFA 247
+Y+T+I+ F + + + EL EM ++ + + + TYT+++ +F
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREMSQRGL--------------VGNTVTYTTIIQGFFQ 445
Query: 248 EG 249
G
Sbjct: 446 AG 447
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 85/177 (48%), Gaps = 28/177 (15%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD ++ LI GL+ + SEA+ L +MV+ G PD TY +++ G+ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 129 FHLHDEM----IQKSLTDFVT------------------------GFSPFVVTYNALIHG 160
+L ++M I+ ++ F T G P VVTYN+LI+
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 161 YCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDI 217
C GR+ +A +L M E + P+ V+++ +I F + +L +A +L EM ++ I
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 28/205 (13%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD S+L+ G R+S+A+ L +MV G PD +T++ L+ L + S+A
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L D+M+Q+ G P +VTY +++G C G A+ +L M + + V
Sbjct: 208 VALVDQMVQR-------GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDI------------------WWLDENTRESLM- 229
++T+I + R + A +L EM+ K I W D + S M
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 230 --KDLSDVDTYTSVMNDYFAEGSIL 252
K +V T+ ++++ +F EG ++
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLV 345
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 111/274 (40%), Gaps = 47/274 (17%)
Query: 1 MAFTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXX 60
+ F + I F K +A K++ +MI + P TY L
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 61 XXXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCR 120
+ LP+ Y+ LI G + R+ + ++LFREM + G++ + TY+ ++
Sbjct: 389 MVS----KDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFF 444
Query: 121 LTGEFSKAFHLHDEMIQKSL-TDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILR---- 175
G+ A + +M+ + TD ++TY+ L+HG C G+ A+ I +
Sbjct: 445 QAGDCDSAQMVFKQMVSNRVPTD--------IMTYSILLHGLCSYGKLDTALVIFKYLQK 496
Query: 176 ---------------GMAEMG-------------LPPDAVSYSTVISWFHRNRELGKAYE 207
GM + G + PD V+Y+T+IS R L +A +
Sbjct: 497 SEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADD 556
Query: 208 LKVEMDEKDIWWLDENTRESLMK-DLSDVDTYTS 240
L +M E D + T +L++ +L D D S
Sbjct: 557 LFRKMKE-DGTLPNSGTYNTLIRANLRDCDRAAS 589
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSKAFHLHDEM 135
++ L+ + + + + L +M G+ D YTYS+ ++ CR + + S A + +M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRS-QLSLALAVLAKM 144
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISW 195
++ G+ P +VT ++L++GYC R +A+ ++ M EMG PD +++T+I
Sbjct: 145 MK-------LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 196 FHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEGSI 251
+ + +A L +M ++ D+ TY +V+N G I
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQ--------------PDLVTYGTVVNGLCKRGDI 239
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 88/222 (39%), Gaps = 31/222 (13%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
D+A +++ M+ P + TY TL G++ +
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ----RGLVGNTVT 435
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ +I G +Q G A +F++MV + V D TYS+L+ G+ A + + +
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIF-KYL 494
Query: 137 QKS---LTDFV-----------------------TGFSPFVVTYNALIHGYCFLGRFVEA 170
QKS L F+ P VVTYN +I G C EA
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEA 554
Query: 171 MGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEM 212
+ R M E G P++ +Y+T+I R+ + + EL EM
Sbjct: 555 DDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEM 596
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 11 FHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGI 70
F K +KA +++ +M +TPTV T+ +L G+
Sbjct: 497 FREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAES----GL 552
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFH 130
LPD++ ++++ILG ++GR+ +A + + E ++ PD YT ++L++ G KA +
Sbjct: 553 LPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALN 612
Query: 131 LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYS 190
+ +I++ D VTYN +I +C + EA +L M E GL PD +Y+
Sbjct: 613 FFNTLIEEREVD--------TVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYN 664
Query: 191 TVISWFHRNRELGKAYEL 208
+ IS + +L + EL
Sbjct: 665 SFISLLMEDGKLSETDEL 682
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTY-SLLMDTCRLTGEFSKA 128
I P + +++LI GL G+ A++ F E+ SG+LPD+ T+ S+++ C+ G KA
Sbjct: 517 ITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCK-EGRVEKA 575
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
F ++E I+ S F P T N L++G C G +A+ + E D V+
Sbjct: 576 FEFYNESIKHS-------FKPDNYTCNILLNGLCKEGMTEKALNFFNTLIE-EREVDTVT 627
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDI 217
Y+T+IS F ++++L +AY+L EM+EK +
Sbjct: 628 YNTMISAFCKDKKLKEAYDLLSEMEEKGL 656
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 37/206 (17%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTY-SLLMDTCRLTGEFSKAFH 130
PDN Y+ ++ + ++GRLS+ +L +M ++G++P+ TY +L+ C+L G +AF
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKL-GSLKEAFQ 296
Query: 131 LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYS 190
+ + M Q T P + TYN LI+G C G E + ++ M + L PD V+Y+
Sbjct: 297 IVELMKQ-------TNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYN 349
Query: 191 TVISWFHRNRELGKAYELKVEMDEKD---------------IWWLDENTRESLMKDLS-- 233
T+I ELG + E + M++ + W E RE++ + +
Sbjct: 350 TLIDGCF---ELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKEL 406
Query: 234 --------DVDTYTSVMNDYFAEGSI 251
D+ TY +++ Y G +
Sbjct: 407 VDMHGFSPDIVTYHTLIKAYLKVGDL 432
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G++P+ Y+ L+ G + G L EA + M ++ VLPD TY++L++ G +
Sbjct: 270 GLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREG 329
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCF-LGRFVEAMGILRGMAEMGLPPDAV 187
L D M KSL P VVTYN LI G CF LG +EA ++ M G+ + V
Sbjct: 330 LELMDAM--KSLK-----LQPDVVTYNTLIDG-CFELGLSLEARKLMEQMENDGVKANQV 381
Query: 188 SYSTVISWFHR 198
+++ + W +
Sbjct: 382 THNISLKWLCK 392
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 29/169 (17%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
+LPD Y+ LI GL G + E L+L M + PD TY+ L+D C G +A
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364
Query: 129 FHLHDEM---------------------------IQKSLTDFVT--GFSPFVVTYNALIH 159
L ++M + + + + V GFSP +VTY+ LI
Sbjct: 365 RKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIK 424
Query: 160 GYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYEL 208
Y +G A+ ++R M + G+ + ++ +T++ + R+L +A+ L
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL 473
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 11/133 (8%)
Query: 86 QQGRLSEALDLFREMVRSGVLPDEYT-YSLLMDTCRLTGEFS--KAFHLHDEMIQKSLTD 142
+G+ AL +F++M+R + P+ T +LL+ R FS A + D+M++
Sbjct: 143 HEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVK----- 197
Query: 143 FVTGFSPFVVTYNALIHGYCFLGRFVEAMGIL-RGMAEMGLPPDAVSYSTVISWFHRNRE 201
G S V T+N L++GYC G+ +A+G+L R ++E + PD V+Y+T++ +
Sbjct: 198 --IGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGR 255
Query: 202 LGKAYELKVEMDE 214
L EL ++M +
Sbjct: 256 LSDLKELLLDMKK 268
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI + + ++ L ++ +L EA +L + G + DE TY L+ + K
Sbjct: 445 KGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEK 504
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + DEM + +T P V T+N+LI G C G+ AM +AE GL PD
Sbjct: 505 ALEMWDEMKKVKIT-------PTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDS 557
Query: 188 SYSTVISWFHRNRELGKAYE 207
+++++I + + + KA+E
Sbjct: 558 TFNSIILGYCKEGRVEKAFE 577
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 87/177 (49%), Gaps = 23/177 (12%)
Query: 78 SALILGLYQ---QGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDE 134
+ L++GL + +S A ++F +MV+ GV + T+++L++ L G+ A
Sbjct: 170 NTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALG---- 225
Query: 135 MIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
M+++ +++F +P VTYN ++ GR + +L M + GL P+ V+Y+ ++
Sbjct: 226 MLERMVSEF--KVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVY 283
Query: 195 WFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEGSI 251
+ + L +A+++ M + ++ L D+ TY ++N GS+
Sbjct: 284 GYCKLGSLKEAFQIVELMKQTNV--------------LPDLCTYNILINGLCNAGSM 326
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 93/184 (50%), Gaps = 21/184 (11%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI D Y+ LI GL GR ++A L R+MV+ + P+ ++ L+DT G +
Sbjct: 213 KGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE 272
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A +L+ EMI++S+ P V TYN+LI+G+C G +A + M G PD V
Sbjct: 273 ARNLYKEMIRRSVV-------PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVV 325
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFA 247
+Y+T+I+ F +++ + +L EM + + + D TY ++++ Y
Sbjct: 326 TYNTLITGFCKSKRVEDGMKLFCEMTYQGL--------------VGDAFTYNTLIHGYCQ 371
Query: 248 EGSI 251
G +
Sbjct: 372 AGKL 375
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 86/189 (45%), Gaps = 11/189 (5%)
Query: 26 MIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYSALILGLY 85
M+ G P V TY TL +G++ D Y+ LI G
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY----QGLVGDAFTYNTLIHGYC 370
Query: 86 QQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVT 145
Q G+L+ A +F MV GV PD TY++L+D G+ KA + +++ QKS D
Sbjct: 371 QAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL-QKSEMDVD- 428
Query: 146 GFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKA 205
++TYN +I G C + EA + R + G+ PDA++Y T+IS R +A
Sbjct: 429 -----IITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREA 483
Query: 206 YELKVEMDE 214
+L M E
Sbjct: 484 DKLCRRMKE 492
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
P+ ++ALI ++G L EA +L++EM+R V+P+ +TY+ L++ + G A ++
Sbjct: 252 PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYM 311
Query: 132 HDEMIQK-------SLTDFVTGFSPF---------------------VVTYNALIHGYCF 163
D M+ K + +TGF TYN LIHGYC
Sbjct: 312 FDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ 371
Query: 164 LGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYEL-----KVEMD 213
G+ A + M + G+ PD V+Y+ ++ N ++ KA + K EMD
Sbjct: 372 AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 426
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 11/200 (5%)
Query: 18 KASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGY 77
+A +Y +MI V P V TY +L +G PD Y
Sbjct: 272 EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS----KGCFPDVVTY 327
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
+ LI G + R+ + + LF EM G++ D +TY+ L+ G+ + A + + M+
Sbjct: 328 NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD 387
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFH 197
G SP +VTYN L+ C G+ +A+ ++ + + + D ++Y+ +I
Sbjct: 388 -------CGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 440
Query: 198 RNRELGKAYELKVEMDEKDI 217
R +L +A+ L + K +
Sbjct: 441 RTDKLKEAWCLFRSLTRKGV 460
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 83/170 (48%), Gaps = 10/170 (5%)
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSKAF 129
+P ++ ++ + + + + L+ +M G+ D Y++++L+ CR +
Sbjct: 76 IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALA 135
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
L M GF P +VT +L++G+C RF EA+ ++ M G P+ V Y
Sbjct: 136 LLGKMM--------KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIY 187
Query: 190 STVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYT 239
+TVI+ +NR+L A E+ M++K I D T +L+ LS+ +T
Sbjct: 188 NTVINGLCKNRDLNNALEVFYCMEKKGIRA-DAVTYNTLISGLSNSGRWT 236
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 102/243 (41%), Gaps = 27/243 (11%)
Query: 11 FHWLKPDKASKVYCQMIDSGVTPT-VDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEG 69
H +K D A ++C+M+ S P+ VD + L G
Sbjct: 55 LHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENL-----G 109
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF 129
I D ++ LI + RLS AL L +M++ G P T L++ F +A
Sbjct: 110 ISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAV 169
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
L D S+ F GF P VV YN +I+G C A+ + M + G+ DAV+Y
Sbjct: 170 SLVD-----SMDGF--GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTY 222
Query: 190 STVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEG 249
+T+IS + A L +M ++ I D N V +T++++ + EG
Sbjct: 223 NTLISGLSNSGRWTDAARLLRDMVKRKI---DPN-----------VIFFTALIDTFVKEG 268
Query: 250 SIL 252
++L
Sbjct: 269 NLL 271
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 11/203 (5%)
Query: 3 FTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXX 62
+++ I + + D A ++ +M + GV P V TY +L
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL----ISCLCNYERWSDASRLL 318
Query: 63 XXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLT 122
I P+ ++ALI ++G+L EA L+ EM++ + PD +TYS L++ +
Sbjct: 319 SDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 378
Query: 123 GEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGL 182
+A H+ + MI K P VVTYN LI+G+C R E + + R M++ GL
Sbjct: 379 DRLDEAKHMFELMISKDCF-------PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL 431
Query: 183 PPDAVSYSTVISWFHRNRELGKA 205
+ V+Y+T+I F + R+ A
Sbjct: 432 VGNTVTYTTLIHGFFQARDCDNA 454
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 92/179 (51%), Gaps = 21/179 (11%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ P+ YS+LI L R S+A L +M+ + P+ T++ L+D G+ +
Sbjct: 289 KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVE 348
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L+DEMI++S+ P + TY++LI+G+C R EA + M P+ V
Sbjct: 349 AEKLYDEMIKRSI-------DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 401
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYF 246
+Y+T+I+ F + + + + EL EM ++ + + + TYT++++ +F
Sbjct: 402 TYNTLINGFCKAKRIDEGVELFREMSQRGL--------------VGNTVTYTTLIHGFF 446
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 79/182 (43%), Gaps = 11/182 (6%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
D+A ++ MI P V TY TL G++ +
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ----RGLVGNTVT 437
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ LI G +Q A +F++MV GV P+ TY+ L+D G+ KA + E +
Sbjct: 438 YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF-EYL 496
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
Q+S P + TYN +I G C G+ + + ++ G+ PD + Y+T+IS F
Sbjct: 497 QRS------KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGF 550
Query: 197 HR 198
R
Sbjct: 551 CR 552
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 11/218 (5%)
Query: 1 MAFTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXX 60
+ FT+ I +F K +A + +M+ G P + TY +
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK 250
Query: 61 XXXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCR 120
++ YS +I L + +AL+LF EM GV P+ TYS L+
Sbjct: 251 MEAAKIEANVVI----YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 121 LTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEM 180
+S A L +MI++ + +P VVT+NALI + G+ VEA + M +
Sbjct: 307 NYERWSDASRLLSDMIERKI-------NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
Query: 181 GLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDIW 218
+ PD +YS++I+ F + L +A + M KD +
Sbjct: 360 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 42/205 (20%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD ++ LI GL+ + SEA+ L MV+ G P+ TY ++++ G+ A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 129 FHLHDEM----IQKSLTDFVT------------------------GFSPFVVTYNALIHG 160
F+L ++M I+ ++ + T G P V+TY++LI
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 161 YCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDIWWL 220
C R+ +A +L M E + P+ V+++ +I F + +L +A +L EM ++ I
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSID-- 362
Query: 221 DENTRESLMKDLSDVDTYTSVMNDY 245
D+ TY+S++N +
Sbjct: 363 ------------PDIFTYSSLINGF 375
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 13/206 (6%)
Query: 1 MAFTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXX 60
+ ++S I + ++ + AS++ MI+ + P V T+ L
Sbjct: 296 ITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDE 355
Query: 61 XXXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCR 120
I PD YS+LI G RL EA +F M+ P+ TY+ L++
Sbjct: 356 MIK----RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411
Query: 121 LTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVE-AMGILRGMAE 179
+ L EM Q+ G VTY LIHG+ F R + A + + M
Sbjct: 412 KAKRIDEGVELFREMSQR-------GLVGNTVTYTTLIHGF-FQARDCDNAQMVFKQMVS 463
Query: 180 MGLPPDAVSYSTVISWFHRNRELGKA 205
G+ P+ ++Y+T++ +N +L KA
Sbjct: 464 DGVHPNIMTYNTLLDGLCKNGKLEKA 489
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 77/146 (52%), Gaps = 9/146 (6%)
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSKAF 129
LP ++ L+ + + + + L +M R G+ + YTY++L++ CR + + S A
Sbjct: 82 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS-QISLAL 140
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
L +M++ G+ P +VT ++L++GYC R +A+ ++ M EMG PD +++
Sbjct: 141 ALLGKMMK-------LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITF 193
Query: 190 STVISWFHRNRELGKAYELKVEMDEK 215
+T+I + + +A L M ++
Sbjct: 194 TTLIHGLFLHNKASEAVALVDRMVQR 219
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ P+ Y+ L+ GL + G+L +A+ +F + RS + P YTY+++++ G+
Sbjct: 464 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
+ L + K G P V+ YN +I G+C G EA + R M E G PD+
Sbjct: 524 GWDLFCSLSLK-------GVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 11/200 (5%)
Query: 18 KASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGY 77
+A K+Y +MI + P + TY +L + P+ Y
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS----KDCFPNVVTY 403
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
+ LI G + R+ E ++LFREM + G++ + TY+ L + G F + +M+
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL-----IHGFFQARDCDNAQMVF 458
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFH 197
K + G P ++TYN L+ G C G+ +AM + + + P +Y+ +I
Sbjct: 459 KQMVS--DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 516
Query: 198 RNRELGKAYELKVEMDEKDI 217
+ ++ ++L + K +
Sbjct: 517 KAGKVEDGWDLFCSLSLKGV 536
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 7/141 (4%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ LI ++ ++S AL L +M++ G P T S L++ S A L D+M+
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+ G+ P +T+ LIHG + EA+ ++ M + G P+ V+Y V++
Sbjct: 183 E-------MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 197 HRNRELGKAYELKVEMDEKDI 217
+ ++ A+ L +M+ I
Sbjct: 236 CKRGDIDLAFNLLNKMEAAKI 256
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 18 KASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGY 77
+A ++ QM++ G+TP V T+ TL +G+ D Y
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVG----KGLHIDVVTY 264
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
++ G+ + G AL+L +M + + PD YS ++D G S A +L EM++
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFH 197
K G +P V TYN +I G+C GR+ +A +LR M E + PD ++++ +IS
Sbjct: 325 K-------GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377
Query: 198 RNRELGKAYELKVEMDEKDIW 218
+ +L +A +L EM + I+
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIF 398
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 79/169 (46%), Gaps = 24/169 (14%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI P+ Y+ +I G GR S+A L R+M+ + PD T++ L+ G+ +
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 128 AFHLHDEMIQKSL-TDFVT------GF-----------------SPFVVTYNALIHGYCF 163
A L DEM+ + + D VT GF SP VVT+N +I YC
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCR 444
Query: 164 LGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEM 212
R E M +LR ++ GL + +Y+T+I F L A +L EM
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 27/149 (18%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD ++ L+ GL + R+SEAL LF MV +G F +A
Sbjct: 171 GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG--------------------FLEA 210
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L D+M++ G +P V+T+N LI+G C GR +EA ++ M GL D V+
Sbjct: 211 VALFDQMVE-------IGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDI 217
Y T+++ + + A L +M+E I
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHI 292
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G++ + Y+ LI G + L+ A DLF+EM+ GV PD T ++L+ + +A
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L E+IQ S D T V YN +IHG C + EA + + G+ PD +
Sbjct: 522 LELF-EVIQMSKIDLDT------VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQT 574
Query: 189 YSTVISWF 196
Y+ +IS F
Sbjct: 575 YNVMISGF 582
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 84/215 (39%), Gaps = 30/215 (13%)
Query: 19 ASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYS 78
A ++ +M++ G+ P V TY + I PD ++
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE----INPDVLTFN 370
Query: 79 ALILGLYQQGRLSEALDLFREMVRSGVLPDEYTY-SLLMDTCRLTGEFSKAFHLHDEMIQ 137
ALI ++G+L EA L EM+ + PD TY S++ C+ F A H+ D M
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK-HNRFDDAKHMFDLMAS 429
Query: 138 KSLTDFVT------------------------GFSPFVVTYNALIHGYCFLGRFVEAMGI 173
+ F T G TYN LIHG+C + A +
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 174 LRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYEL 208
+ M G+ PD ++ + ++ F N +L +A EL
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 92/179 (51%), Gaps = 21/179 (11%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI PD YS+LI L GR S+A L +M+ + P+ T+S L+D G+ +
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 346
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L+DEMI++S+ P + TY++LI+G+C R EA + M P+ V
Sbjct: 347 AEKLYDEMIKRSI-------DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 399
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYF 246
+YST+I F + + + + EL EM ++ + + + TYT++++ +F
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQRGL--------------VGNTVTYTTLIHGFF 444
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 76/149 (51%), Gaps = 7/149 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD S+L+ G R+S+A+ L +MV G PD +T++ L+ L + S+A
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L D+M+Q+ G P +VTY +++G C G A+ +L+ M + + D V
Sbjct: 208 VALVDQMVQR-------GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDI 217
Y+T+I + + + A L EMD K I
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 46/203 (22%)
Query: 3 FTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXX 62
++S I + ++ + AS++ MI+ + P V T
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT------------------------- 330
Query: 63 XXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLT 122
+SALI ++G+L EA L+ EM++ + PD +TYS L++ +
Sbjct: 331 --------------FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 123 GEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGL 182
+A H+ + MI K P VVTY+ LI G+C R E M + R M++ GL
Sbjct: 377 DRLDEAKHMFELMISKDCF-------PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL 429
Query: 183 PPDAVSYSTVISWFHRNRELGKA 205
+ V+Y+T+I F + R+ A
Sbjct: 430 VGNTVTYTTLIHGFFQARDCDNA 452
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 78/144 (54%), Gaps = 7/144 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+ P+ Y+ L+ GL + G+L++A+ +F + RS + PD YTY+++++ G+
Sbjct: 463 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDG 522
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+ L + K G SP V+ YN +I G+C G EA +L+ M E G P++ +
Sbjct: 523 WELFCNLSLK-------GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGT 575
Query: 189 YSTVISWFHRNRELGKAYELKVEM 212
Y+T+I R+ + + EL EM
Sbjct: 576 YNTLIRARLRDGDREASAELIKEM 599
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 11/198 (5%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
D+A ++ MI P V TY TL G++ +
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQ----RGLVGNTVT 435
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ LI G +Q A +F++MV GV P+ TY++L+D G+ +KA + E +
Sbjct: 436 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF-EYL 494
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
Q+S + P + TYN +I G C G+ + + ++ G+ P+ ++Y+T+IS F
Sbjct: 495 QRSTME------PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGF 548
Query: 197 HRNRELGKAYELKVEMDE 214
R +A L +M E
Sbjct: 549 CRKGSKEEADSLLKKMKE 566
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 11/200 (5%)
Query: 18 KASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGY 77
+A K+Y +MI + P + TY +L + P+ Y
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS----KDCFPNVVTY 401
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
S LI G + R+ E ++LFREM + G++ + TY+ L + G F + +M+
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL-----IHGFFQARDCDNAQMVF 456
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFH 197
K + G P ++TYN L+ G C G+ +AM + + + PD +Y+ +I
Sbjct: 457 KQMVS--VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514
Query: 198 RNRELGKAYELKVEMDEKDI 217
+ ++ +EL + K +
Sbjct: 515 KAGKVEDGWELFCNLSLKGV 534
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 21/184 (11%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD ++ LI GL+ + SEA+ L +MV+ G PD TY +++ G+ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L +M + + VV YN +I G C +A+ + M G+ PD +
Sbjct: 243 LSLLKKMEKGKI-------EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFT 295
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAE 248
YS++IS A L +M E+ I +V T++++++ + E
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDMIERKIN--------------PNVVTFSALIDAFVKE 341
Query: 249 GSIL 252
G ++
Sbjct: 342 GKLV 345
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSKAFHLHDEM 135
++ L+ + + + + L +M G+ D YTYS+ ++ CR + + S A + +M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRS-QLSLALAVLAKM 144
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISW 195
++ G+ P +VT ++L++GYC R +A+ ++ M EMG PD +++T+I
Sbjct: 145 MK-------LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 196 FHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEGSI 251
+ + +A L +M ++ D+ TY +V+N G I
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQ--------------PDLVTYGTVVNGLCKRGDI 239
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G+ + Y++LI GL QQG L EAL LF + G++P E TY +L+D G F
Sbjct: 684 RGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLD 743
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L D M+ K G P ++ YN+++ GYC LG+ +AM ++ + PDA
Sbjct: 744 AEKLLDSMVSK-------GLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAF 796
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDI 217
+ S++I + + ++ +A + E +K+I
Sbjct: 797 TVSSMIKGYCKKGDMEEALSVFTEFKDKNI 826
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 12/150 (8%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
EG+ P+ Y+A+I GL + G+L EA LF ++ G+ DE+ Y L+D G ++
Sbjct: 306 EGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNR 365
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
AF + +M Q+ G P ++TYN +I+G C GR EA + +G+ D +
Sbjct: 366 AFSMLGDMEQR-------GIQPSILTYNTVINGLCMAGRVSEADEVSKGVV-----GDVI 413
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDI 217
+YST++ + + + + E++ E I
Sbjct: 414 TYSTLLDSYIKVQNIDAVLEIRRRFLEAKI 443
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 111/254 (43%), Gaps = 28/254 (11%)
Query: 15 KPDKASKVYCQMIDSGV-TPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPD 73
KP+ A + +DSGV P + TY TL EG D
Sbjct: 186 KPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLED----EGFEFD 241
Query: 74 NNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHD 133
YS I G ++ G L +AL REMV G+ D +YS+L+D G +A L
Sbjct: 242 CVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLG 301
Query: 134 EMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVI 193
+MI++ G P ++TY A+I G C +G+ EA + + +G+ D Y T+I
Sbjct: 302 KMIKE-------GVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLI 354
Query: 194 SWFHRNRELGKAYELKVEMDEKDIW--WLDENT---------RESLMKDLS-----DVDT 237
R L +A+ + +M+++ I L NT R S ++S DV T
Sbjct: 355 DGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVIT 414
Query: 238 YTSVMNDYFAEGSI 251
Y+++++ Y +I
Sbjct: 415 YSTLLDSYIKVQNI 428
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 11/195 (5%)
Query: 18 KASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGY 77
+A +V QMI +P TY TL +GILPD +
Sbjct: 348 EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTS----KGILPDVCTF 403
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
++LI GL A++LF EM G PDE+TY++L+D+ G+ +A ++ +M
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM-- 461
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFH 197
++G + V+TYN LI G+C + EA I M G+ ++V+Y+T+I
Sbjct: 462 -----ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516
Query: 198 RNRELGKAYELKVEM 212
++R + A +L +M
Sbjct: 517 KSRRVEDAAQLMDQM 531
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 84/160 (52%), Gaps = 9/160 (5%)
Query: 74 NNGYSALILGLYQQGRLSEALDLFREMV-RSGVLPDEYTYSLLMDTCRLTGEFSKAFHLH 132
N + ++ G ++GR+ +AL+ +EM + G PD+YT++ L++ G A +
Sbjct: 259 NVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIM 318
Query: 133 DEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTV 192
D M+Q+ G+ P V TYN++I G C LG EA+ +L M P+ V+Y+T+
Sbjct: 319 DVMLQE-------GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTL 371
Query: 193 ISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDL 232
IS + ++ +A EL + K I D T SL++ L
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILP-DVCTFNSLIQGL 410
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTY-SLLMDTCRLTGEFS 126
+G PD ++ L+ GL + G + A+++ M++ G PD YTY S++ C+L GE
Sbjct: 289 DGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL-GEVK 347
Query: 127 KAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
+A + D+MI + SP VTYN LI C + EA + R + G+ PD
Sbjct: 348 EAVEVLDQMITRDC-------SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDV 400
Query: 187 VSYSTVISWFHRNRELGKAYELKVEMDEK 215
+++++I R A EL EM K
Sbjct: 401 CTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 87/203 (42%), Gaps = 13/203 (6%)
Query: 15 KPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDN 74
K D+A + QM SG +V TY TL G+ ++
Sbjct: 450 KLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEV----HGVSRNS 505
Query: 75 NGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTY-SLLMDTCRLTGEFSKAFHLHD 133
Y+ LI GL + R+ +A L +M+ G PD+YTY SLL CR G+ KA +
Sbjct: 506 VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCR-GGDIKKAADIVQ 564
Query: 134 EMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVI 193
M G P +VTY LI G C GR A +LR + G+ +Y+ VI
Sbjct: 565 AMTS-------NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVI 617
Query: 194 SWFHRNRELGKAYELKVEMDEKD 216
R R+ +A L EM E++
Sbjct: 618 QGLFRKRKTTEAINLFREMLEQN 640
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
P+ Y+ LI L ++ ++ EA +L R + G+LPD T++ L+ LT A L
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
+EM K G P TYN LI C G+ EA+ +L+ M G ++Y+T
Sbjct: 423 FEEMRSK-------GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475
Query: 192 VISWFHRNRELGKAYELKVEMDEKDIWWLDENT 224
+I F + + +A E+ DE ++ + N+
Sbjct: 476 LIDGFCKANKTREAEEI---FDEMEVHGVSRNS 505
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 81/177 (45%), Gaps = 29/177 (16%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
GI PD + ++ LI L + +L A+ + +M G++PDE T++ +M G+ A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 129 FHLHDEMIQ-----------------------KSLTDFVT------GFSPFVVTYNALIH 159
+ ++M++ + +F+ GF P T+N L++
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 160 GYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKD 216
G C G A+ I+ M + G PD +Y++VIS + E+ +A E+ +M +D
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD 360
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 8/147 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+ P+ Y+ LI L G+ SEA++LF++M SG+ PD+ Y++L+ + +
Sbjct: 254 DNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDE 313
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L + M++ G P V+TYNALI G+C +AMG+L M E L PD +
Sbjct: 314 ASGLLEHMLE-------NGLMPNVITYNALIKGFC-KKNVHKAMGLLSKMLEQNLVPDLI 365
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDE 214
+Y+T+I+ + L AY L M+E
Sbjct: 366 TYNTLIAGQCSSGNLDSAYRLLSLMEE 392
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 78/186 (41%), Gaps = 14/186 (7%)
Query: 1 MAFTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXX 60
+++T I +F K D+A + +M D P V TY L
Sbjct: 226 VSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQ 285
Query: 61 XXXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-C 119
GI PD+ Y+ LI L EA L M+ +G++P+ TY+ L+ C
Sbjct: 286 MSE----SGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFC 341
Query: 120 RLTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAE 179
+ KA L +M++++L P ++TYN LI G C G A +L M E
Sbjct: 342 K--KNVHKAMGLLSKMLEQNLV-------PDLITYNTLIAGQCSSGNLDSAYRLLSLMEE 392
Query: 180 MGLPPD 185
GL P+
Sbjct: 393 SGLVPN 398
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 7/85 (8%)
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
L+ EM++ D V SP + T+N L++GYC LG VEA + + + G PD +Y
Sbjct: 141 RLYTEMLE----DLV---SPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTY 193
Query: 190 STVISWFHRNRELGKAYELKVEMDE 214
++ I+ R +E+ A+++ EM +
Sbjct: 194 TSFITGHCRRKEVDAAFKVFKEMTQ 218
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 78/140 (55%), Gaps = 7/140 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G PD Y+ L+ G+ ++GRL EA+ +M SG P+ T+++++ + TG +
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L +M++K GFSP VVT+N LI+ C G A+ IL M + G P+++
Sbjct: 328 AEKLLADMLRK-------GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSL 380
Query: 188 SYSTVISWFHRNRELGKAYE 207
SY+ ++ F + +++ +A E
Sbjct: 381 SYNPLLHGFCKEKKMDRAIE 400
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 24/183 (13%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G +PD + LI G + G+ +A + + SG +PD TY++++ GE + A
Sbjct: 132 GNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNA 191
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+ D M SP VVTYN ++ C G+ +AM +L M + PD ++
Sbjct: 192 LSVLDRM----------SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVIT 241
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAE 248
Y+ +I R+ +G A +L EM ++ DV TY ++N E
Sbjct: 242 YTILIEATCRDSGVGHAMKLLDEMRDRGCT--------------PDVVTYNVLVNGICKE 287
Query: 249 GSI 251
G +
Sbjct: 288 GRL 290
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 96/229 (41%), Gaps = 37/229 (16%)
Query: 15 KPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDN 74
K KA+K+ + SG P V TY + + PD
Sbjct: 152 KTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS-------VSPDV 204
Query: 75 NGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMD-TCRLTGEFSKAFHLHD 133
Y+ ++ L G+L +A+++ M++ PD TY++L++ TCR +G A L D
Sbjct: 205 VTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSG-VGHAMKLLD 263
Query: 134 EMIQKSLT-DFVT---------------------------GFSPFVVTYNALIHGYCFLG 165
EM + T D VT G P V+T+N ++ C G
Sbjct: 264 EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG 323
Query: 166 RFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDE 214
R+++A +L M G P V+++ +I++ R LG+A ++ +M +
Sbjct: 324 RWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ 372
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G P ++ LI L ++G L A+D+ +M + G P+ +Y+ L+ + +
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDR 397
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + M+ + G P +VTYN ++ C G+ +A+ IL ++ G P +
Sbjct: 398 AIEYLERMVSR-------GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLI 450
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFA 247
+Y+TVI + + GKA +L EM KD+ D TY+S++
Sbjct: 451 TYNTVIDGLAKAGKTGKAIKLLDEMRAKDLK--------------PDTITYSSLVGGLSR 496
Query: 248 EGSI 251
EG +
Sbjct: 497 EGKV 500
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G PD Y+ ++ L + G++ +A+++ ++ G P TY+ ++D G+ K
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L DEM K L P +TY++L+ G G+ EA+ MG+ P+AV
Sbjct: 468 AIKLLDEMRAKDL-------KPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAV 520
Query: 188 SYSTVISWFHRNRELGKAYELKVEM 212
++++++ ++R+ +A + V M
Sbjct: 521 TFNSIMLGLCKSRQTDRAIDFLVFM 545
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 69/139 (49%), Gaps = 7/139 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G P++ Y+ L+ G ++ ++ A++ MV G PD TY+ ++ G+ A
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+ +++ K G SP ++TYN +I G G+ +A+ +L M L PD ++
Sbjct: 434 VEILNQLSSK-------GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTIT 486
Query: 189 YSTVISWFHRNRELGKAYE 207
YS+++ R ++ +A +
Sbjct: 487 YSSLVGGLSREGKVDEAIK 505
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 13/169 (7%)
Query: 15 KPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDN 74
K + A ++ Q+ G +P + TY T+ + + PD
Sbjct: 429 KVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA----KDLKPDT 484
Query: 75 NGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTY-SLLMDTCRLTGEFSKAFHLHD 133
YS+L+ GL ++G++ EA+ F E R G+ P+ T+ S+++ C+ + + +A
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK-SRQTDRAIDFLV 543
Query: 134 EMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGL 182
MI + G P +Y LI G + G EA+ +L + GL
Sbjct: 544 FMINR-------GCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 76/147 (51%), Gaps = 7/147 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
GI P Y+ LI GL + G L EMV++G PD Y++++ ++GE KA
Sbjct: 319 GIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKA 378
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+ EM V G P V TYN++I G C G F EA +L+ M G P+ V
Sbjct: 379 KEMFREMT-------VKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVV 431
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEK 215
YST++S+ + +L +A ++ EM +K
Sbjct: 432 YSTLVSYLRKAGKLSEARKVIREMVKK 458
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 25/182 (13%)
Query: 72 PDNNGYSALILGL--YQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF 129
P + Y+A++ L +Q +L E + +++M+ G PD TY++L+ T G+ +
Sbjct: 217 PFKHSYNAILNSLLGVKQYKLIEWV--YKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFD 274
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
L DEM + GFSP TYN L+H + + A+ L M E+G+ P + Y
Sbjct: 275 RLFDEMARD-------GFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHY 327
Query: 190 STVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEG 249
+T+I R L E ++LDE + DV YT ++ Y G
Sbjct: 328 TTLIDGLSRAGNL-----------EACKYFLDEMVKAGCR---PDVVCYTVMITGYVVSG 373
Query: 250 SI 251
+
Sbjct: 374 EL 375
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 11/217 (5%)
Query: 1 MAFTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXX 60
+ FTS + HW + + A ++ Q++ G P V TY TL
Sbjct: 154 VTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQ 213
Query: 61 XXXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCR 120
G P+ Y+AL+ GL + GR +A L R+M++ + P+ T++ L+D
Sbjct: 214 MGT----NGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 121 LTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEM 180
G+ +A L++ MIQ S+ P V TY +LI+G C G EA + M
Sbjct: 270 KVGKLMEAKELYNVMIQMSV-------YPDVFTYGSLINGLCMYGLLDEARQMFYLMERN 322
Query: 181 GLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDI 217
G P+ V Y+T+I F +++ + ++ EM +K +
Sbjct: 323 GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 21/175 (12%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD +++L+ G R+ +A+ LF +++ G P+ TY+ L+ + A
Sbjct: 148 GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHA 207
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L ++M G P VVTYNAL+ G C +GR+ +A +LR M + + P+ ++
Sbjct: 208 VELFNQM-------GTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMN 243
++ +I F + +L +A EL M + ++ DV TY S++N
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVY--------------PDVFTYGSLIN 301
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 7/147 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G++ + Y+ LI G GR A ++F +M PD TY++L+D G+ K
Sbjct: 357 KGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEK 416
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + + M ++ + +VTY +I G C LG+ +A + + G+ P+ +
Sbjct: 417 ALMIFEYMRKREM-------DINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVI 469
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDE 214
+Y+T+IS F R + +A L +M E
Sbjct: 470 TYTTMISGFCRRGLIHEADSLFKKMKE 496
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 7/142 (4%)
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFH 130
LP ++ L+ + + R + LF +M G+ P T +++M L+ + +A
Sbjct: 80 LPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASC 139
Query: 131 LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYS 190
+M++ GF P +VT+ +L++GYC R +A+ + + MG P+ V+Y+
Sbjct: 140 FLGKMMK-------LGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYT 192
Query: 191 TVISWFHRNRELGKAYELKVEM 212
T+I +NR L A EL +M
Sbjct: 193 TLIRCLCKNRHLNHAVELFNQM 214
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 66/149 (44%), Gaps = 12/149 (8%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF 129
+ PD Y +LI GL G L EA +F M R+G P+E Y+ L+ +
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
+ EM QK G +TY LI GYC +GR A + M+ PPD +Y
Sbjct: 349 KIFYEMSQK-------GVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTY 401
Query: 190 STVISWFHRNRELGKA-----YELKVEMD 213
+ ++ N ++ KA Y K EMD
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMD 430
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMD-TCRLTGEFSKAFH 130
PD Y+ L+ GL G++ +AL +F M + + + TY++++ C+L G+ AF
Sbjct: 396 PDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKL-GKVEDAFD 454
Query: 131 LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYS 190
L + K G P V+TY +I G+C G EA + + M E G P+ Y
Sbjct: 455 LFCSLFSK-------GMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 22/179 (12%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
P Y+ LI L R SEAL+L +EM +G+ P+ +TY++L+D+ +F KA L
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
+M++K G P V+TYNALI+GYC G +A+ ++ M L P+ +Y+
Sbjct: 381 LGQMLEK-------GLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNE 433
Query: 192 VISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEGS 250
+I + ++ + KA + +M E+ + L DV TY S+++ G+
Sbjct: 434 LIKGYCKS-NVHKAMGVLNKMLERKV--------------LPDVVTYNSLIDGQCRSGN 477
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 25/235 (10%)
Query: 18 KASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGY 77
KA V +M++ V P V TY +L G++PD Y
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND----RGLVPDQWTY 500
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
+++I L + R+ EA DLF + + GV P+ Y+ L+D G+ +A + ++M+
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS 560
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFH 197
K+ P +T+NALIHG C G+ EA + M ++GL P + + +I
Sbjct: 561 KNCL-------PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLL 613
Query: 198 RNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEGSIL 252
++ + AY +M L T+ D TYT+ + Y EG +L
Sbjct: 614 KDGDFDHAYSRFQQM-------LSSGTK-------PDAHTYTTFIQTYCREGRLL 654
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 105/228 (46%), Gaps = 28/228 (12%)
Query: 25 QMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYSALILGL 84
+M ++G+ P + TY L +G++P+ Y+ALI G
Sbjct: 348 EMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLE----KGLMPNVITYNALINGY 403
Query: 85 YQQGRLSEALDLFREMVRSGVLPDEYTYS-LLMDTCRLTGEFSKAFHLHDEMIQKSLTDF 143
++G + +A+D+ M + P+ TY+ L+ C+ KA + ++M+++ +
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK--SNVHKAMGVLNKMLERKVL-- 459
Query: 144 VTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELG 203
P VVTYN+LI G C G F A +L M + GL PD +Y+++I +++ +
Sbjct: 460 -----PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Query: 204 KAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEGSI 251
+A +L +++K + +V YT++++ Y G +
Sbjct: 515 EACDLFDSLEQKGVN--------------PNVVMYTALIDGYCKAGKV 548
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+ LP++ ++ALI GL G+L EA L +MV+ G+ P T ++L+ G+F
Sbjct: 561 KNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDH 620
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A+ +M+ +G P TY I YC GR ++A ++ M E G+ PD
Sbjct: 621 AYSRFQQMLS-------SGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLF 673
Query: 188 SYSTVISWF 196
+YS++I +
Sbjct: 674 TYSSLIKGY 682
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 94/235 (40%), Gaps = 25/235 (10%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
D+ +VY +M++ V P + TY + G+ PD
Sbjct: 200 DEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEA----GLDPDFFT 255
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y++LI+G Q+ L A +F EM G +E Y+ L+ + +A L +M
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMK 315
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
P V TY LI C R EA+ +++ M E G+ P+ +Y+ +I
Sbjct: 316 DDECF-------PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSL 368
Query: 197 HRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEGSI 251
+ KA EL +M EK + + +V TY +++N Y G I
Sbjct: 369 CSQCKFEKARELLGQMLEKGL--------------MPNVITYNALINGYCKRGMI 409
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 74 NNGYSALILGLY--------QQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEF 125
NNGY ++ + G LDL R+M + E Y L++
Sbjct: 135 NNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERF--ELKYKLIIGCYNTLLNS 192
Query: 126 SKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPD 185
F L DEM Q + P + TYN +++GYC LG EA + + E GL PD
Sbjct: 193 LARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPD 252
Query: 186 AVSYSTVISWFHRNRELGKAYELKVEMDEK 215
+Y+++I + + ++L A+++ EM K
Sbjct: 253 FFTYTSLIMGYCQRKDLDSAFKVFNEMPLK 282
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFH 130
LPD Y L+ GL ++ R+ EA+ L EM G P Y++L+D G+ ++
Sbjct: 219 LPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTK 278
Query: 131 LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYS 190
L D M F+ G P VTYN LIHG C G+ +A+ +L M P+ V+Y
Sbjct: 279 LVDNM-------FLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYG 331
Query: 191 TVISWFHRNRELGKAYELKVEMDEK 215
T+I+ + R A L M+E+
Sbjct: 332 TLINGLVKQRRATDAVRLLSSMEER 356
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 69/126 (54%), Gaps = 7/126 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G P+ YS L+ GL ++G+ +EA ++ M+ SG LP+ YTYS LM TG +
Sbjct: 391 KGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEE 450
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + EM + TG S Y+ LI G C +GR EAM + M +G+ PD V
Sbjct: 451 AVQVWKEMDK-------TGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTV 503
Query: 188 SYSTVI 193
+YS++I
Sbjct: 504 AYSSII 509
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 7/144 (4%)
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFH 130
+P++ Y LI GL +Q R ++A+ L M G +++ YS+L+ G+ +A
Sbjct: 324 IPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMS 383
Query: 131 LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYS 190
L +M +K G P +V Y+ L+ G C G+ EA IL M G P+A +YS
Sbjct: 384 LWRKMAEK-------GCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYS 436
Query: 191 TVISWFHRNRELGKAYELKVEMDE 214
+++ F + +A ++ EMD+
Sbjct: 437 SLMKGFFKTGLCEEAVQVWKEMDK 460
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 76/180 (42%), Gaps = 8/180 (4%)
Query: 15 KPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDN 74
KP++A ++ +MI SG P TY +L G +
Sbjct: 412 KPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKT----GCSRNK 467
Query: 75 NGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDE 134
YS LI GL GR+ EA+ ++ +M+ G+ PD YS ++ G A L+ E
Sbjct: 468 FCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHE 527
Query: 135 MIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
M L P VVTYN L+ G C A+ +L M + G PD ++ +T ++
Sbjct: 528 M----LCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLN 583
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 83/210 (39%), Gaps = 42/210 (20%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
EG P Y+ LI GL ++G L+ L M G +P+E TY+ L+ L G+ K
Sbjct: 251 EGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDK 310
Query: 128 AFHLHDEMI--------------------QKSLTDFV--------TGFSPFVVTYNALIH 159
A L + M+ Q+ TD V G+ Y+ LI
Sbjct: 311 AVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLIS 370
Query: 160 GYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDIWW 219
G G+ EAM + R MAE G P+ V YS ++ R + +A E+ M
Sbjct: 371 GLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGC-- 428
Query: 220 LDENTRESLMKDLSDVDTYTSVMNDYFAEG 249
L + TY+S+M +F G
Sbjct: 429 ------------LPNAYTYSSLMKGFFKTG 446
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 7/134 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
GI PD Y++LI L+ G + + +M+R G+ PD T+S L+D G+ +A
Sbjct: 214 GIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEA 273
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
++EMIQ+S+ +P +VTYN+LI+G C G EA +L + G P+AV+
Sbjct: 274 KKQYNEMIQRSV-------NPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVT 326
Query: 189 YSTVISWFHRNREL 202
Y+T+I+ + + + +
Sbjct: 327 YNTLINGYCKAKRV 340
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 95/209 (45%), Gaps = 12/209 (5%)
Query: 8 GLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXX 67
GL H L D+A KV ++ G P TY TL
Sbjct: 298 GLCIHGL-LDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSR---- 352
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ D Y+ L G Q G+ S A + MV GV PD YT+++L+D G+ K
Sbjct: 353 DGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGK 412
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + E +QKS T V G ++TYN +I G C + +A + +A G+ PD +
Sbjct: 413 AL-VRLEDLQKSKT--VVG----IITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVI 465
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKD 216
+Y T++ R R +A+EL +M ++D
Sbjct: 466 TYITMMIGLRRKRLWREAHELYRKMQKED 494
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 23/181 (12%)
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSKAF 129
LP +S L++ + + + + LFR + G+ D Y+++ L+D CR S A
Sbjct: 76 LPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCR-CARLSLAL 134
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
+M++ GF P +VT+ +L++G+C + RF EAM ++ + +G P+ V Y
Sbjct: 135 SCLGKMMK-------LGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIY 187
Query: 190 STVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEG 249
+T+I ++ A ++ M + I DV TY S++ F G
Sbjct: 188 NTIIDSLCEKGQVNTALDVLKHMKKMGIR--------------PDVVTYNSLITRLFHSG 233
Query: 250 S 250
+
Sbjct: 234 T 234
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 13/206 (6%)
Query: 1 MAFTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXX 60
+ + S I +FH ++++ M+ G++P V T+ L
Sbjct: 220 VTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSAL----IDVYGKEGQLLEAKK 275
Query: 61 XXXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCR 120
+ P+ Y++LI GL G L EA + +V G P+ TY+ L++
Sbjct: 276 QYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLING-- 333
Query: 121 LTGEFSKAFHLHDEMIQKSLTDFVT-GFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAE 179
+ KA + D M K L G TYN L GYC G+F A +L M
Sbjct: 334 ----YCKAKRVDDGM--KILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVS 387
Query: 180 MGLPPDAVSYSTVISWFHRNRELGKA 205
G+ PD +++ ++ + ++GKA
Sbjct: 388 CGVHPDMYTFNILLDGLCDHGKIGKA 413
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 78/142 (54%), Gaps = 10/142 (7%)
Query: 73 DNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLH 132
D Y++LI GL + G + +A LF +M+R G P + ++L++ +G +A
Sbjct: 563 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQ 622
Query: 133 DEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTV 192
EM+ + G +P +VT+N+LI+G C GR + + + R + G+PPD V+++T+
Sbjct: 623 KEMVLR-------GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTL 675
Query: 193 ISWFHRNRELGKAYELKVEMDE 214
+SW + G Y+ + +DE
Sbjct: 676 MSWLCKG---GFVYDACLLLDE 694
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 93/184 (50%), Gaps = 23/184 (12%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSK 127
GI+PD Y++LI G +++G + AL++ +M G P+ Y+Y++L+D C+L G+ +
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKL-GKIDE 442
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A+++ +EM G P V +N LI +C R EA+ I R M G PD
Sbjct: 443 AYNVLNEM-------SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVY 495
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFA 247
+++++IS E+ A +W L + E + +++ TY +++N +
Sbjct: 496 TFNSLISGLCEVDEIKHA-----------LWLLRDMISEGV---VANTVTYNTLINAFLR 541
Query: 248 EGSI 251
G I
Sbjct: 542 RGEI 545
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 7/141 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ P+ G++ LI ++ R+ EA+++FREM R G PD YT++ L+ E
Sbjct: 453 DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKH 512
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L +MI + G VTYN LI+ + G EA ++ M G P D +
Sbjct: 513 ALWLLRDMISE-------GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEI 565
Query: 188 SYSTVISWFHRNRELGKAYEL 208
+Y+++I R E+ KA L
Sbjct: 566 TYNSLIKGLCRAGEVDKARSL 586
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 98/246 (39%), Gaps = 64/246 (26%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G +PD ++ +ILGL + R++EA + M+ G PD+ TY LM+ G A
Sbjct: 282 GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA 341
Query: 129 ---------------------FHLHDEM--IQKSLTDFVT--GFSPFVVTYNALIHGY-- 161
F H + + L+D VT G P V TYN+LI+GY
Sbjct: 342 KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401
Query: 162 ---------------------------------CFLGRFVEAMGILRGMAEMGLPPDAVS 188
C LG+ EA +L M+ GL P+ V
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTS---VMNDY 245
++ +IS F + + +A E+ EM K D T SL+ L +VD ++ D
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKP-DVYTFNSLISGLCEVDEIKHALWLLRDM 520
Query: 246 FAEGSI 251
+EG +
Sbjct: 521 ISEGVV 526
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 27/173 (15%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYS-LLMDTCRLTGEFSK 127
G +P++ Y LI L + R++EAL L EM G +PD T++ +++ C+ ++
Sbjct: 247 GCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFD-RINE 305
Query: 128 AFHLHDEMIQKSLT--DFVTGF----------------------SPFVVTYNALIHGYCF 163
A + + M+ + D G+ P +V +N LIHG+
Sbjct: 306 AAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVT 365
Query: 164 LGRFVEAMGILRGMA-EMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEK 215
GR +A +L M G+ PD +Y+++I + + +G A E+ +M K
Sbjct: 366 HGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 78/180 (43%), Gaps = 25/180 (13%)
Query: 90 LSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVTGFSP 149
+ AL L R+M + G +P+ Y L+ + ++A L +EM F+ G P
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM-------FLMGCVP 285
Query: 150 FVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELK 209
T+N +I G C R EA ++ M G PD ++Y +++ + + A +L
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345
Query: 210 VEMDEKDIWWLDE-----------NTRESLMKDL-------SDVDTYTSVMNDYFAEGSI 251
+ + +I + + ++++ D+ DV TY S++ Y+ EG +
Sbjct: 346 YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLV 405
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 16/184 (8%)
Query: 30 GVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYSALILGLYQQGR 89
G+ PT+ TY TL +G PD Y+ ++ + +GR
Sbjct: 255 GIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKS----KGFQPDMQTYNPILSWMCNEGR 310
Query: 90 LSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVTGFSP 149
SE L REM G++PD +Y++L+ C G+ AF DEM+++ G P
Sbjct: 311 ASEVL---REMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQ-------GMVP 360
Query: 150 FVVTYNALIHGYCFLGRFVEAMGIL-RGMAEMGLPPDAVSYSTVISWFHRNRELGKAYEL 208
TYN LIHG F+ +EA IL R + E G+ D+V+Y+ +I+ + ++ + KA+ L
Sbjct: 361 TFYTYNTLIHGL-FMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFAL 419
Query: 209 KVEM 212
EM
Sbjct: 420 HDEM 423
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 77/145 (53%), Gaps = 7/145 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI P Y++LI L ++ + EA +LF ++V G+ PD + LMD G +
Sbjct: 426 DGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDR 485
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
AF L EM S+ +P VTYN L+ G C G+F EA ++ M G+ PD +
Sbjct: 486 AFSLLKEMDMMSI-------NPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHI 538
Query: 188 SYSTVISWFHRNRELGKAYELKVEM 212
SY+T+IS + + + A+ ++ EM
Sbjct: 539 SYNTLISGYSKKGDTKHAFMVRDEM 563
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 28/178 (15%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G++P Y+ LI GL+ + ++ A L RE+ G++ D TY++L++ G+ K
Sbjct: 356 QGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKK 415
Query: 128 AFHLHDEMIQKSL--TDFV--------------------------TGFSPFVVTYNALIH 159
AF LHDEM+ + T F G P +V N L+
Sbjct: 416 AFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMD 475
Query: 160 GYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDI 217
G+C +G A +L+ M M + PD V+Y+ ++ + +A EL EM + I
Sbjct: 476 GHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGI 533
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF 129
I PD+ Y+ L+ GL +G+ EA +L EM R G+ PD +Y+ L+ G+ AF
Sbjct: 498 INPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAF 557
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
+ DEM+ GF+P ++TYNAL+ G A +LR M G+ P+ S+
Sbjct: 558 MVRDEMLS-------LGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSF 610
Query: 190 STVI 193
+VI
Sbjct: 611 CSVI 614
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 12/223 (5%)
Query: 18 KASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGY 77
KA ++ +M+ G+ PT TY +L +G+ PD
Sbjct: 415 KAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVG----KGMKPDLVMM 470
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
+ L+ G G + A L +EM + PD+ TY+ LM G+F +A L EM +
Sbjct: 471 NTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKR 530
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFH 197
+ G P ++YN LI GY G A + M +G P ++Y+ ++
Sbjct: 531 R-------GIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLS 583
Query: 198 RNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTS 240
+N+E A EL EM + I ++++ S+++ +S++D S
Sbjct: 584 KNQEGELAEELLREMKSEGIVP-NDSSFCSVIEAMSNLDAKKS 625
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 7/140 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G++PD+ Y+ LI G G L A EMV+ G++P YTY+ L+ + + A
Sbjct: 322 GLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAA 381
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L E+ +K G VTYN LI+GYC G +A + M G+ P +
Sbjct: 382 EILIREIREK-------GIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFT 434
Query: 189 YSTVISWFHRNRELGKAYEL 208
Y+++I R + +A EL
Sbjct: 435 YTSLIYVLCRKNKTREADEL 454
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 10/147 (6%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G P + ++ L + R+ A + +M R + + YT++++++ G+ K
Sbjct: 184 KGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKK 243
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A M V G P +VTYN L+ G+ GR A I+ M G PD
Sbjct: 244 AKGFLGIM-------EVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQ 296
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDE 214
+Y+ ++SW G+A E+ EM E
Sbjct: 297 TYNPILSWMCNE---GRASEVLREMKE 320
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 68/181 (37%), Gaps = 24/181 (13%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
GI P Y+ L+ G +GR+ A + EM G PD TY+ ++ G S+
Sbjct: 255 GIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEV 314
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
E+ G P V+YN LI G G A M + G+ P +
Sbjct: 315 LREMKEI----------GLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYT 364
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAE 248
Y+T+I ++ A L E+ EK I D TY ++N Y
Sbjct: 365 YNTLIHGLFMENKIEAAEILIREIREKGIVL--------------DSVTYNILINGYCQH 410
Query: 249 G 249
G
Sbjct: 411 G 411
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 85/183 (46%), Gaps = 11/183 (6%)
Query: 26 MIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYSALILGLY 85
M+ SG P V Y TL +G+ D Y+ L+ GL
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEK----KGLGADVVTYNTLLTGLC 222
Query: 86 QQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVT 145
GR S+A + R+M++ + PD T++ L+D G +A L+ EMIQ S+
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV----- 277
Query: 146 GFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKA 205
P VTYN++I+G C GR +A MA G P+ V+Y+T+IS F + R + +
Sbjct: 278 --DPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEG 335
Query: 206 YEL 208
+L
Sbjct: 336 MKL 338
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G P + +L+ G R+ +A L MV+SG P+ Y+ L+D GE + A
Sbjct: 136 GYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIA 195
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L +EM +K G VVTYN L+ G C+ GR+ +A +LR M + + PD V+
Sbjct: 196 LELLNEMEKK-------GLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAE 248
++ +I F + L +A EL EM + + D ++V TY S++N
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSV-------------DPNNV-TYNSIINGLCMH 294
Query: 249 GSI 251
G +
Sbjct: 295 GRL 297
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 7/134 (5%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
P+N Y+++I GL GRL +A F M G P+ TY+ L+ F K F +
Sbjct: 279 PNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISG------FCK-FRM 331
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
DE ++ GF+ + TYN LIHGYC +G+ A+ I M + PD +++
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391
Query: 192 VISWFHRNRELGKA 205
++ N E+ A
Sbjct: 392 LLHGLCVNGEIESA 405
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 87/210 (41%), Gaps = 12/210 (5%)
Query: 8 GLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXX 67
GL H D A K + M G P V TY TL
Sbjct: 290 GLCMHGRLYD-AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC---- 344
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
EG D Y+ LI G Q G+L ALD+F MV V PD T+ +L+ + GE
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A D+M + ++ G +V YN +IHG C + +A + + G+ PDA
Sbjct: 405 ALVKFDDMRE---SEKYIG----IVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDAR 457
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDI 217
+Y+ +I +N +A EL M E+ I
Sbjct: 458 TYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSKAF 129
LP ++ L+ R + ++M G+ D Y++++L+ CR + S A
Sbjct: 68 LPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCS-RLSFAL 126
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
+ +M++ G+ P +VT+ +L+HG+C + R +A ++ M + G P+ V Y
Sbjct: 127 SVLGKMMK-------LGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVY 179
Query: 190 STVISWFHRNRELGKAYELKVEMDEKDI 217
+T+I +N EL A EL EM++K +
Sbjct: 180 NTLIDGLCKNGELNIALELLNEMEKKGL 207
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 7/148 (4%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF 129
I P+ +S LI ++G+L EA +L +EM+ G+ PD TY+ L+D KA
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
+ D M+ K G P + T+N LI+GYC R + + + R M+ G+ D V+Y
Sbjct: 389 QMVDLMVSK-------GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 441
Query: 190 STVISWFHRNRELGKAYELKVEMDEKDI 217
+T+I F +L A EL EM + +
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKV 469
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 7/149 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G P+ +S LI GL +GR+SEAL+L MV G PD T + L++ L+G+ ++A
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L D+M++ G P VTY +++ C G+ AM +LR M E + DAV
Sbjct: 213 MLLIDKMVE-------YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDI 217
YS +I ++ L A+ L EM+ K I
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGI 294
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 21/183 (11%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G P+ Y ++ + + G+ + A++L R+M + D YS+++D G A
Sbjct: 223 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 282
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
F+L +EM K G + ++TYN LI G+C GR+ + +LR M + + P+ V+
Sbjct: 283 FNLFNEMEMK-------GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAE 248
+S +I F + +L +A EL EM + I D TYTS+++ + E
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIA--------------PDTITYTSLIDGFCKE 381
Query: 249 GSI 251
+
Sbjct: 382 NHL 384
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
S +I + +L A ++++ G P+ T+S L++ L G S+A L D M++
Sbjct: 127 SIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 186
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFH 197
G P ++T N L++G C G+ EAM ++ M E G P+AV+Y V++
Sbjct: 187 -------MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMC 239
Query: 198 RNRELGKAYELKVEMDEKDI 217
++ + A EL +M+E++I
Sbjct: 240 KSGQTALAMELLRKMEERNI 259
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 103/247 (41%), Gaps = 35/247 (14%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
DKA+++ M+ G P + T+ L G++ D
Sbjct: 385 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSL----RGVVADTVT 440
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ LI G + G+L+ A +LF+EMV V P+ TY +L+D GE KA + E I
Sbjct: 441 YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF-EKI 499
Query: 137 QKSLTDF-----------------------------VTGFSPFVVTYNALIHGYCFLGRF 167
+KS + + G P V TYN +I G C G
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559
Query: 168 VEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRES 227
EA + R M E G PD +Y+ +I + + K+ +L +E ++ + +D +T +
Sbjct: 560 SEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKL-IEELKRCGFSVDASTIKM 618
Query: 228 LMKDLSD 234
++ LSD
Sbjct: 619 VIDMLSD 625
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 13/195 (6%)
Query: 15 KPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDN 74
K +A +++ +MI G+ P TY +L +G P+
Sbjct: 348 KLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVS----KGCDPNI 403
Query: 75 NGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSKAFHLHD 133
++ LI G + R+ + L+LFR+M GV+ D TY+ L+ C L G+ + A L
Sbjct: 404 RTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL-GKLNVAKELFQ 462
Query: 134 EMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVI 193
EM+ + + P +VTY L+ G C G +A+ I + + + D Y+ +I
Sbjct: 463 EMVSRKV-------PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIII 515
Query: 194 SWFHRNRELGKAYEL 208
++ A++L
Sbjct: 516 HGMCNASKVDDAWDL 530
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 80/147 (54%), Gaps = 7/147 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GILP+ + Y+ LI GL + RL +AL+LF M GV P YTY + +D +G+
Sbjct: 392 QGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVS 451
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A ++M K G +P +V NA ++ GR EA I G+ ++GL PD+V
Sbjct: 452 ALETFEKMKTK-------GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSV 504
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDE 214
+Y+ ++ + + E+ +A +L EM E
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMME 531
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
P Y LI GL + GRL EA LF M+ G P+ Y++L++ GE A L
Sbjct: 889 PTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACAL 948
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
M+++ G P + TY+ L+ C +GR E + + + E GL PD V Y+
Sbjct: 949 FKRMVKE-------GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNL 1001
Query: 192 VISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDL 232
+I+ ++ L +A L EM D T SL+ +L
Sbjct: 1002 IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNL 1042
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 80/176 (45%), Gaps = 12/176 (6%)
Query: 15 KPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDN 74
+ D A ++ +M+ GV P + TY L G+ PD
Sbjct: 941 EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKE----SGLNPDV 996
Query: 75 NGYSALILGLYQQGRLSEALDLFREMVRS-GVLPDEYTYSLLMDTCRLTGEFSKAFHLHD 133
Y+ +I GL + RL EAL LF EM S G+ PD YTY+ L+ + G +A +++
Sbjct: 997 VCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYN 1056
Query: 134 EMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
E IQ++ G P V T+NALI GY G+ A + + M G P+ +Y
Sbjct: 1057 E-IQRA------GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 73/144 (50%), Gaps = 7/144 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G++PD+ Y+ ++ + G + EA+ L EM+ +G PD + L++T +A
Sbjct: 498 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+ + M + L P VVTYN L+ G G+ EA+ + GM + G PP+ ++
Sbjct: 558 WKMFMRMKEMKL-------KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTIT 610
Query: 189 YSTVISWFHRNRELGKAYELKVEM 212
++T+ +N E+ A ++ +M
Sbjct: 611 FNTLFDCLCKNDEVTLALKMLFKM 634
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 7/148 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI P+ +A + L + GR EA +F + G++PD TY+++M GE +
Sbjct: 462 KGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDE 521
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L EM++ G P V+ N+LI+ R EA + M EM L P V
Sbjct: 522 AIKLLSEMME-------NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEK 215
+Y+T+++ +N ++ +A EL M +K
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQK 602
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G P+ Y+ LI G + G A LF+ MV+ GV PD TYS+L+D + G +
Sbjct: 921 GCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGM-AEMGLPPDAV 187
H E+ + +G +P VV YN +I+G R EA+ + M G+ PD
Sbjct: 981 LHYFKELKE-------SGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLY 1033
Query: 188 SYSTVI 193
+Y+++I
Sbjct: 1034 TYNSLI 1039
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
EG P YS+L++GL ++ + + L +EM G+ P+ YT+++ + G+ ++
Sbjct: 217 EGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINE 276
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A+ + M + G P VVTY LI C + A + M PD V
Sbjct: 277 AYEILKRMDDE-------GCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRV 329
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKD 216
+Y T++ F NR+L + EM EKD
Sbjct: 330 TYITLLDRFSDNRDLDSVKQFWSEM-EKD 357
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 6/141 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
EG+ PD YS L+ L GR+ E L F+E+ SG+ PD Y+L+++ + +
Sbjct: 955 EGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEE 1014
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L +EM G +P + TYN+LI G EA I + GL P+
Sbjct: 1015 ALVLFNEMKTSR------GITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVF 1068
Query: 188 SYSTVISWFHRNRELGKAYEL 208
+++ +I + + + AY +
Sbjct: 1069 TFNALIRGYSLSGKPEHAYAV 1089
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 70/169 (41%), Gaps = 29/169 (17%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+ P Y+ LI GL + + A D+F ++ +G +PD TY+ L+D +G+ +
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839
Query: 129 FHLHDEM-IQKSLTDFVT----------------------------GFSPFVVTYNALIH 159
F L+ EM + + +T FSP TY LI
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 899
Query: 160 GYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYEL 208
G GR EA + GM + G P+ Y+ +I+ F + E A L
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACAL 948
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ L+ GL + G++ EA++LF MV+ G P+ T++ L D E + A + +M+
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 635
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
G P V TYN +I G G+ EAM M ++ + PD V+ T++
Sbjct: 636 D-------MGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGV 687
Query: 197 HRNRELGKAYEL 208
+ + AY++
Sbjct: 688 VKASLIEDAYKI 699
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 87/219 (39%), Gaps = 32/219 (14%)
Query: 18 KASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGY 77
+A +VY +MI G P++ TY +L G+ P+ +
Sbjct: 206 EAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETL----GLKPNVYTF 261
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMD---TCRLTGEFSKAF----- 129
+ I L + G+++EA ++ + M G PD TY++L+D T R + F
Sbjct: 262 TICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKT 321
Query: 130 --HLHDEMIQKSLTDFVT------------------GFSPFVVTYNALIHGYCFLGRFVE 169
H D + +L D + G P VVT+ L+ C G F E
Sbjct: 322 GRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGE 381
Query: 170 AMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYEL 208
A L M + G+ P+ +Y+T+I R L A EL
Sbjct: 382 AFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEL 420
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF 129
I D N Y + L +G L +A R+M G + + Y+Y+ L+ + ++A
Sbjct: 149 IKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAM 208
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
++ MI + GF P + TY++L+ G MG+L+ M +GL P+ ++
Sbjct: 209 EVYRRMI-------LEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTF 261
Query: 190 STVISWFHRNRELGKAYELKVEMDEK 215
+ I R ++ +AYE+ MD++
Sbjct: 262 TICIRVLGRAGKINEAYEILKRMDDE 287
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 7/140 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G + + Y+ LI L + +EA++++R M+ G P TYS LM +
Sbjct: 183 GFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSV 242
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L EM G P V T+ I G+ EA IL+ M + G PD V+
Sbjct: 243 MGLLKEM-------ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVT 295
Query: 189 YSTVISWFHRNRELGKAYEL 208
Y+ +I R+L A E+
Sbjct: 296 YTVLIDALCTARKLDCAKEV 315
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
GI PD Y++LIL L G + EA ++ E+ R+G+ P+ +T++ L+ L+G+
Sbjct: 1026 RGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEH 1085
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNAL 157
A+ ++ M+ GFSP TY L
Sbjct: 1086 AYAVYQTMV-------TGGFSPNTGTYEQL 1108
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 10/211 (4%)
Query: 2 AFTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXX 61
++TS I + + +A V+ +M + G PT+ TY +
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 62 XXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRL 121
+GI PD Y+ LI + EA +F EM +G D+ TY+ L+D
Sbjct: 270 MKS---DGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK 326
Query: 122 TGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMG 181
+ +A + +EM+ + GFSP +VTYN+LI Y G EAM + MAE G
Sbjct: 327 SHRPKEAMKVLNEMV-------LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 182 LPPDAVSYSTVISWFHRNRELGKAYELKVEM 212
PD +Y+T++S F R ++ A + EM
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 32/228 (14%)
Query: 15 KPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDN 74
+P +A KV +M+ +G +P++ TY +L +G PD
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE----KGTKPDV 384
Query: 75 NGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDE 134
Y+ L+ G + G++ A+ +F EM +G P+ T++ + G+F++ + DE
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDE 444
Query: 135 MIQKSLT-DFVT---------------------------GFSPFVVTYNALIHGYCFLGR 166
+ L+ D VT GF P T+N LI Y G
Sbjct: 445 INVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 504
Query: 167 FVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDE 214
F +AM + R M + G+ PD +Y+TV++ R ++ ++ EM++
Sbjct: 505 FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 21/156 (13%)
Query: 96 LFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYN 155
L +M G+ PD YTY+ L+ C+ +A + +EM GFS VTYN
Sbjct: 266 LVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMK-------AAGFSYDKVTYN 318
Query: 156 ALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEK 215
AL+ Y R EAM +L M G P V+Y+++IS + R+ L +A ELK +M EK
Sbjct: 319 ALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEK 378
Query: 216 DIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEGSI 251
DV TYT++++ + G +
Sbjct: 379 GTK--------------PDVFTYTTLLSGFERAGKV 400
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 103/261 (39%), Gaps = 48/261 (18%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
++A VY +M+D+GVTP + TY T+ +G N
Sbjct: 506 EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME-----DGRCKPNEL 560
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDE----YTYSLLMDTCRLTGEFSKAF--- 129
+L Y G+ + E V SGV+ T L+ C L E +AF
Sbjct: 561 TYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL 620
Query: 130 ------------------HLHDEMIQKS--LTDFVT--GFSPFVVTYNALIHGYCFLGRF 167
+ +M+ K+ + D++ GF+P + TYN+L++ + F
Sbjct: 621 KERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADF 680
Query: 168 VEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRES 227
++ ILR + G+ PD +SY+TVI + RN + A + EM I
Sbjct: 681 GKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGI---------- 730
Query: 228 LMKDLSDVDTYTSVMNDYFAE 248
+ DV TY + + Y A+
Sbjct: 731 ----VPDVITYNTFIGSYAAD 747
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 11/153 (7%)
Query: 18 KASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGY 77
KA+ V M + G TP++ TY +L +GI PD Y
Sbjct: 647 KANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILA----KGIKPDIISY 702
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
+ +I + R+ +A +F EM SG++PD TY+ + + F +A + MI+
Sbjct: 703 NTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK 762
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEA 170
G P TYN+++ GYC L R EA
Sbjct: 763 H-------GCRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 10/136 (7%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTY-SLLMDTCRLTGEFS 126
G P Y++L+ + ++ ++ RE++ G+ PD +Y +++ CR T
Sbjct: 658 RGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNT-RMR 716
Query: 127 KAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
A + EM +G P V+TYN I Y F EA+G++R M + G P+
Sbjct: 717 DASRIFSEMRN-------SGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQ 769
Query: 187 VSYSTVISWFHR-NRE 201
+Y++++ + + NR+
Sbjct: 770 NTYNSIVDGYCKLNRK 785
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 73/141 (51%), Gaps = 8/141 (5%)
Query: 73 DNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLH 132
DN+ + +I L ++GR+S A ++F + G D Y+Y+ L+ +G + +A ++
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 133 DEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGR-FVEAMGILRGMAEMGLPPDAVSYST 191
+M + G P ++TYN +++ + +G + + ++ M G+ PDA +Y+T
Sbjct: 232 KKMEED-------GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNT 284
Query: 192 VISWFHRNRELGKAYELKVEM 212
+I+ R +A ++ EM
Sbjct: 285 LITCCKRGSLHQEAAQVFEEM 305
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 82/149 (55%), Gaps = 7/149 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G++P+ + Y++LI G G++ A+DL+++MV G+ D +TY+ ++D G + A
Sbjct: 690 GLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLA 749
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L+ E++ G P + + L++G G+F++A +L M + + P+ +
Sbjct: 750 SDLYSELLD-------LGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLL 802
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDI 217
YSTVI+ HR L +A+ L EM EK I
Sbjct: 803 YSTVIAGHHREGNLNEAFRLHDEMLEKGI 831
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMV-RSGVLPDEYTYSLLMDTCRLTGEFS 126
G PD +S + + L ALDL REM + GV + TY+ ++ G
Sbjct: 268 RGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNME 327
Query: 127 KAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
+A + DEM+ G V+ +L++GYC +A+ + M E GL PD
Sbjct: 328 EAVRVMDEMVG-------FGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDK 380
Query: 187 VSYSTVISWFHRNRELGKAYELKVEM 212
V +S ++ WF +N E+ KA E + M
Sbjct: 381 VMFSVMVEWFCKNMEMEKAIEFYMRM 406
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 6/150 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ P+N YS LI G ++ A D+ +M S +E Y+ +++ G+ SK
Sbjct: 513 KGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSK 572
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A EM+Q + + +S +YN++I G+ +G A+ R M+E G P+ V
Sbjct: 573 A----KEMLQNLIKE--KRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVV 626
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDI 217
+++++I+ F ++ + A E+ EM ++
Sbjct: 627 TFTSLINGFCKSNRMDLALEMTHEMKSMEL 656
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI D Y+ +I GL + G ++ A DL+ E++ G++PDE + +L++ G+F K
Sbjct: 724 DGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLK 783
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + +EM +K +T P V+ Y+ +I G+ G EA + M E G+ D
Sbjct: 784 ASKMLEEMKKKDVT-------PNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDT 836
Query: 188 SYSTVIS 194
++ ++S
Sbjct: 837 VFNLLVS 843
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 6/147 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+ DN L+ ++ + EA+ +FR ++ G PD +SL + T + A
Sbjct: 234 GVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMA 293
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L EM K G TY ++I + G EA+ ++ M G+P ++
Sbjct: 294 LDLLREMRGK------LGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIA 347
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEK 215
+++++ + + ELGKA +L M+E+
Sbjct: 348 ATSLVNGYCKGNELGKALDLFNRMEEE 374
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 4/137 (2%)
Query: 15 KPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDN 74
K D A +Y +M++ G++ + TY T+ GI+PD
Sbjct: 710 KMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDL----GIVPDE 765
Query: 75 NGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDE 134
+ L+ GL ++G+ +A + EM + V P+ YS ++ G ++AF LHDE
Sbjct: 766 ILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDE 825
Query: 135 MIQKSLTDFVTGFSPFV 151
M++K + T F+ V
Sbjct: 826 MLEKGIVHDDTVFNLLV 842
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 76 GYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEM 135
Y+++I G + G A++ +REM +G P+ T++ L++ + A + EM
Sbjct: 592 SYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEM 651
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISW 195
L + Y ALI G+C A + + E+GL P+ Y+++IS
Sbjct: 652 KSMELKLDLPA-------YGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISG 704
Query: 196 FHRNRELGK 204
F R LGK
Sbjct: 705 F---RNLGK 710
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
GI P+ YS+LI GL + GRL++A EM + P+ T+S L+D G+ SK
Sbjct: 77 RGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSK 136
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
++ MIQ S+ P V TY++LI+G C R EA+ +L M G P+ V
Sbjct: 137 VDSVYKMMIQMSI-------DPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVV 189
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDI 217
+YST+ + F ++ + +L +M ++ +
Sbjct: 190 TYSTLANGFFKSSRVDDGIKLLDDMPQRGV 219
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 7/134 (5%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
P+ YS+LI GL R+ EA+ + M+ G P+ TYS L + + L
Sbjct: 151 PNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKL 210
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
D+M Q+ G + V+ N LI GY G+ A+G+ M GL P+ SY+
Sbjct: 211 LDDMPQR-------GVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNI 263
Query: 192 VISWFHRNRELGKA 205
V++ N E+ KA
Sbjct: 264 VLAGLFANGEVEKA 277
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 82/191 (42%), Gaps = 12/191 (6%)
Query: 8 GLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXX 67
GL H + D+A K+ MI G TP V TY TL
Sbjct: 162 GLCMHN-RVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQ---- 216
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G+ + + LI G +Q G++ AL +F M +G++P+ +Y++++ GE K
Sbjct: 217 RGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEK 276
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + M QK+ D ++TY +IHG C EA + + + PD
Sbjct: 277 ALSRFEHM-QKTRNDL------DIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFK 329
Query: 188 SYSTVISWFHR 198
+Y+ +I+ +R
Sbjct: 330 AYTIMIAELNR 340
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 9/164 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPD-EYTYSLLMDTCRLTGEFS 126
G PD Y+ LI GL++ G++++A++++ M+RSGV PD + +L++ C +
Sbjct: 143 RGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCH-----A 197
Query: 127 KAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
+ L EM+ + + S V YNALI G+C GR +A + M+++G PD
Sbjct: 198 RKVDLAYEMVAEEIKSARVKLS--TVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDL 255
Query: 187 VSYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMK 230
V+Y+ ++++++ N L +A + EM I LD + L+K
Sbjct: 256 VTYNVLLNYYYDNNMLKRAEGVMAEMVRSGI-QLDAYSYNQLLK 298
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 85/163 (52%), Gaps = 8/163 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G++ + Y++LI ++G S A L +M G+ PD Y+ ++D +G K
Sbjct: 354 KGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDK 413
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A+ + ++MI+ +T P ++YN+LI G C GR EA+ + M PD +
Sbjct: 414 AYGVFNDMIEHEIT-------PDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDEL 466
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMK 230
++ +I R ++L AY++ +M +K + LD + ++L+K
Sbjct: 467 TFKFIIGGLIRGKKLSAAYKVWDQMMDKG-FTLDRDVSDTLIK 508
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 76/184 (41%), Gaps = 42/184 (22%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYS-LLMDTCRLT----- 122
G PD Y+ L+ Y L A + EMVRSG+ D Y+Y+ LL CR++
Sbjct: 250 GCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKC 309
Query: 123 -----------------------------GEFSKAFHLHDEMIQKSLTDFVTGFSPFVVT 153
KA+ L +EM QK G VVT
Sbjct: 310 YNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQK-------GMVMNVVT 362
Query: 154 YNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMD 213
Y +LI + G A +L M E+GL PD + Y+T++ ++ + KAY + +M
Sbjct: 363 YTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMI 422
Query: 214 EKDI 217
E +I
Sbjct: 423 EHEI 426
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 18 KASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGY 77
+A+++ +M + G+ P V T+ L +G PD +
Sbjct: 409 EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS----KGYFPDIFTF 464
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
+ LI G Q ++ AL++ M+ +GV PD YTY+ L++ T +F + M++
Sbjct: 465 NILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE 524
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFH 197
K G +P + T+N L+ C + EA+G+L M + PDAV++ T+I F
Sbjct: 525 K-------GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFC 577
Query: 198 RNRELGKAYELKVEMDE 214
+N +L AY L +M+E
Sbjct: 578 KNGDLDGAYTLFRKMEE 594
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 11/215 (5%)
Query: 3 FTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXX 62
+ S I + H + ++A ++ + + G+ P V Y TL
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMS 418
Query: 63 XXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLT 122
+G++P+ ++ L+ GL + G +S+A L + M+ G PD +T+++L+
Sbjct: 419 E----KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQ 474
Query: 123 GEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGL 182
+ A + D M+ G P V TYN+L++G C +F + M + M E G
Sbjct: 475 LKMENALEILDVMLD-------NGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527
Query: 183 PPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDI 217
P+ +++ ++ R R+L +A L EM K +
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 16/181 (8%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G +PD Y +LI GL +G + AL LF E + G+ P+ Y+ L+ G +A
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L +EM +K G P V T+N L++G C +G +A G+++ M G PD +
Sbjct: 411 AQLANEMSEK-------GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT 463
Query: 189 YSTVISWFHRNRELGKAYE-LKVEMD---EKDIWWLDENTRESLMKDLSDVDTYTSVMND 244
++ +I + ++ A E L V +D + D++ T SL+ L + VM
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMLDNGVDPDVY-----TYNSLLNGLCKTSKFEDVMET 518
Query: 245 Y 245
Y
Sbjct: 519 Y 519
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 7/122 (5%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
++ L+ L ++G + E L ++++ GVLP+ +TY+L + GE A + +I
Sbjct: 219 FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLI 278
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
++ G P V+TYN LI+G C +F EA L M GL PD+ +Y+T+I+ +
Sbjct: 279 EQ-------GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGY 331
Query: 197 HR 198
+
Sbjct: 332 CK 333
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 15/154 (9%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G PD Y+ LI GL + + EA +MV G+ PD YTY+ L+
Sbjct: 280 QGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLI----------- 328
Query: 128 AFHLHDEMIQ---KSLTDFV-TGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLP 183
A + M+Q + + D V GF P TY +LI G C G A+ + G+
Sbjct: 329 AGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388
Query: 184 PDAVSYSTVISWFHRNRELGKAYELKVEMDEKDI 217
P+ + Y+T+I + +A +L EM EK +
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 422
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 11/189 (5%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
D+A KVY +M D G+TP V ++ +G +
Sbjct: 128 DQAHKVYMRMRDRGITPDVYSFTI----RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVA 183
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y ++ G Y++ +E +LF +M+ SGV T++ L+ G+ + L D++I
Sbjct: 184 YCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI 243
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
++ G P + TYN I G C G A+ ++ + E G PD ++Y+ +I
Sbjct: 244 KR-------GVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGL 296
Query: 197 HRNRELGKA 205
+N + +A
Sbjct: 297 CKNSKFQEA 305
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ +I ++ ++ A LF+EMV + PD YTY L++D TG + + EM+
Sbjct: 605 YNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMM 664
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+ GF P + T +I+ C R EA GI+ M + GL P+AV+
Sbjct: 665 E-------NGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 10/202 (4%)
Query: 13 WLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILP 72
LK + A ++ M+D+GV P V TY +L +G P
Sbjct: 474 QLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE----KGCAP 529
Query: 73 DNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLH 132
+ ++ L+ L + +L EAL L EM V PD T+ L+D G+ A+ L
Sbjct: 530 NLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLF 589
Query: 133 DEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTV 192
+M + V+ +P TYN +IH + A + + M + L PD +Y +
Sbjct: 590 RKMEEAYK---VSSSTP---TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLM 643
Query: 193 ISWFHRNRELGKAYELKVEMDE 214
+ F + + Y+ +EM E
Sbjct: 644 VDGFCKTGNVNLGYKFLLEMME 665
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 9/142 (6%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTY-SLLMDTCRLTGEFS 126
G+LP+ Y+ I GL Q+G L A+ + ++ G PD TY +L+ C+ +F
Sbjct: 245 RGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCK-NSKFQ 303
Query: 127 KAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
+A +M+ + G P TYN LI GYC G A I+ G PD
Sbjct: 304 EAEVYLGKMVNE-------GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ 356
Query: 187 VSYSTVISWFHRNRELGKAYEL 208
+Y ++I E +A L
Sbjct: 357 FTYRSLIDGLCHEGETNRALAL 378
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 58/123 (47%), Gaps = 7/123 (5%)
Query: 86 QQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVT 145
++G++ EA+++F M P ++Y+ +M +G F +A ++ M +
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDR------- 140
Query: 146 GFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKA 205
G +P V ++ + +C R A+ +L M+ G + V+Y TV+ F+ +
Sbjct: 141 GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG 200
Query: 206 YEL 208
YEL
Sbjct: 201 YEL 203
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 114/245 (46%), Gaps = 18/245 (7%)
Query: 8 GLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXX 67
GL H K ++A +V+ +M+ SG++P TY++L
Sbjct: 314 GLCKHG-KYERAKEVFAEMLRSGLSPDSTTYRSL----LMEACKKGDVVETEKVFSDMRS 368
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFS 126
++PD +S+++ + G L +AL F + +G++PD Y++L+ CR G S
Sbjct: 369 RDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR-KGMIS 427
Query: 127 KAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
A +L +EM+Q+ G + VVTYN ++HG C EA + M E L PD+
Sbjct: 428 VAMNLRNEMLQQ-------GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480
Query: 187 VSYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMK---DLSDVDTYTSVMN 243
+ + +I + L A EL +M EK I LD T +L+ + D+DT +
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRI-RLDVVTYNTLLDGFGKVGDIDTAKEIWA 539
Query: 244 DYFAE 248
D ++
Sbjct: 540 DMVSK 544
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 19/175 (10%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ L+ G + G + A +++ +MV +LP +YS+L++ G ++AF + DEMI
Sbjct: 518 YNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMI 577
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
K++ P V+ N++I GYC G + L M G PD +SY+T+I F
Sbjct: 578 SKNI-------KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGF 630
Query: 197 HRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEGSI 251
R + KA+ L +M+E+ + DV TY S+++ + + +
Sbjct: 631 VREENMSKAFGLVKKMEEEQGGL------------VPDVFTYNSILHGFCRQNQM 673
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 5/138 (3%)
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
+++I G + G S+ +M+ G +PD +Y+ L+ SKAF L +M +
Sbjct: 589 NSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEE 648
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFH 197
+ G P V TYN+++HG+C + EA +LR M E G+ PD +Y+ +I+ F
Sbjct: 649 EQ-----GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFV 703
Query: 198 RNRELGKAYELKVEMDEK 215
L +A+ + EM ++
Sbjct: 704 SQDNLTEAFRIHDEMLQR 721
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ PD Y+ LI +G + EA +L M G P YTY+ +++ G++ +
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + EM++ +G SP TY +L+ C G VE + M + PD V
Sbjct: 324 AKEVFAEMLR-------SGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLV 376
Query: 188 SYSTVISWFHRNRELGKA 205
+S+++S F R+ L KA
Sbjct: 377 CFSSMMSLFTRSGNLDKA 394
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFS 126
+G D Y+ ++ GL ++ L EA LF EM + PD YT ++L+D C+L G
Sbjct: 439 QGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL-GNLQ 497
Query: 127 KAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
A L +M +K + VVTYN L+ G+ +G A I M + P
Sbjct: 498 NAMELFQKMKEKRI-------RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP 550
Query: 187 VSYSTVISWFHRNRELGKAYELKVEMDEKDI 217
+SYS +++ L +A+ + EM K+I
Sbjct: 551 ISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
Query: 80 LILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKS 139
++ L + G++ + ++ GV PD TY+ L+ G +AF L + M K
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGK- 299
Query: 140 LTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRN 199
GFSP V TYN +I+G C G++ A + M GL PD+ +Y +++ +
Sbjct: 300 ------GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353
Query: 200 RELGKAYELKVEMDEKDI 217
++ + ++ +M +D+
Sbjct: 354 GDVVETEKVFSDMRSRDV 371
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G++PD Y++++ G +Q ++ EA + R+M+ GV PD TY+ +++ ++A
Sbjct: 652 GLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEA 711
Query: 129 FHLHDEMIQKSLTDFVTGFSP 149
F +HDEM+Q+ GFSP
Sbjct: 712 FRIHDEMLQR-------GFSP 725
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 7/135 (5%)
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
+ALI L + G + A +++E+ RSGV + YT +++++ G+ K ++ +
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFH 197
K G P +VTYN LI Y G EA ++ M G P +Y+TVI+
Sbjct: 264 K-------GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC 316
Query: 198 RNRELGKAYELKVEM 212
++ + +A E+ EM
Sbjct: 317 KHGKYERAKEVFAEM 331
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREM--VRSGVLPDEYTY-SLLMDTCRLTGE 124
EG +PD Y+ LI G ++ +S+A L ++M + G++PD +TY S+L CR +
Sbjct: 614 EGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCR-QNQ 672
Query: 125 FSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPP 184
+A + +MI++ G +P TY +I+G+ EA I M + G P
Sbjct: 673 MKEAEVVLRKMIER-------GVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Query: 185 D 185
D
Sbjct: 726 D 726
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 76/148 (51%), Gaps = 7/148 (4%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF 129
ILP++ + AL+LGL Q+G L EA L ++ SG D Y++++D +G +A
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
L +I+ TG +P V T+N+LI+GYC EA IL + GL P VSY
Sbjct: 489 ELFKVVIE-------TGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSY 541
Query: 190 STVISWFHRNRELGKAYELKVEMDEKDI 217
+T++ + EL+ EM + I
Sbjct: 542 TTLMDAYANCGNTKSIDELRREMKAEGI 569
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 14/185 (7%)
Query: 26 MIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXX-XXXXXXXXEGILPDNNGYSALILGL 84
M+D G++P V TY L I+P S ++ GL
Sbjct: 318 MLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP----CSVMLSGL 373
Query: 85 YQQGRLSEALDLFREMVRSGVLPDEYTYSLLMD-TCRLTGEFSKAFHLHDEMIQKSLTDF 143
+ GR+ EAL LF +M G+ PD YS+++ C+L G+F A L+DEM K +
Sbjct: 374 CKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL-GKFDMALWLYDEMCDKRIL-- 430
Query: 144 VTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELG 203
P T+ AL+ G C G +EA +L + G D V Y+ VI + ++ +
Sbjct: 431 -----PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485
Query: 204 KAYEL 208
+A EL
Sbjct: 486 EALEL 490
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 78/185 (42%), Gaps = 43/185 (23%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G++P ++ LI GL G ++EAL+L +M + GV PD TY++L L G S A
Sbjct: 252 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGA 311
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLG----------------------- 165
+ + +M+ K G SP V+TY L+ G C LG
Sbjct: 312 WEVIRDMLDK-------GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 364
Query: 166 -------------RFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEM 212
R EA+ + M GL PD V+YS VI + + A L EM
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 213 DEKDI 217
+K I
Sbjct: 425 CDKRI 429
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 11/147 (7%)
Query: 73 DNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLT-GEFSKAFH 130
+ + YS ++ GL +Q +L +A+ R + P +++ +M C+L + +K+F
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 131 LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYS 190
T G P V ++N LI+G C +G EA+ + M + G+ PD+V+Y+
Sbjct: 246 C---------TVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYN 296
Query: 191 TVISWFHRNRELGKAYELKVEMDEKDI 217
+ FH + A+E+ +M +K +
Sbjct: 297 ILAKGFHLLGMISGAWEVIRDMLDKGL 323
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 7/150 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI P+ Y+ +I GR S+A L R M+ + PD T+S L++ + S+
Sbjct: 39 KGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSE 98
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A ++ EM++ S+ P +TYN++I G+C R +A +L MA G PD V
Sbjct: 99 AEEIYKEMLRWSIF-------PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVV 151
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDI 217
++ST+I+ + + + + E+ EM + I
Sbjct: 152 TFSTLINGYCKAKRVDNGMEIFCEMHRRGI 181
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 28/167 (16%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF 129
I PD +SALI ++ ++SEA ++++EM+R + P TY+ ++D A
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 130 HLHDEMIQKSLTDFVTGFSPFV----------------------------VTYNALIHGY 161
+ D M K + V FS + VTY LIHG+
Sbjct: 136 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 195
Query: 162 CFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYEL 208
C +G A +L M G+ PD +++ +++ +EL KA+ +
Sbjct: 196 CQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 242
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 7/113 (6%)
Query: 100 MVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIH 159
M +S + D + ++D G A +L EM +K G P V+TYN +I
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEK-------GIFPNVLTYNCMID 53
Query: 160 GYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEM 212
+C GR+ +A +LR M E + PD V++S +I+ F + R++ +A E+ EM
Sbjct: 54 SFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEM 106
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 74/179 (41%), Gaps = 11/179 (6%)
Query: 1 MAFTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXX 60
+ F++ I K +A ++Y +M+ + PT TY ++
Sbjct: 81 VTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSM----IDGFCKQDRVDDAKR 136
Query: 61 XXXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCR 120
+G PD +S LI G + R+ +++F EM R G++ + TY+ L+
Sbjct: 137 MLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 196
Query: 121 LTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAE 179
G+ A L +EMI G +P +T++ ++ G C +A IL + +
Sbjct: 197 QVGDLDAAQDLLNEMIS-------CGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 80/145 (55%), Gaps = 7/145 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G PD Y+ +I G ++G L A L+ EM++ G+ P+E+ Y++++ GE S
Sbjct: 312 KGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISL 371
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
++EM++ G+ +++ N +I G+C G+ EA I + M+E G+ P+A+
Sbjct: 372 VEAFYNEMLR-------NGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAI 424
Query: 188 SYSTVISWFHRNRELGKAYELKVEM 212
+Y+ +I F + ++ K +L E+
Sbjct: 425 TYNALIKGFCKENKVEKGLKLYKEL 449
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 7/145 (4%)
Query: 73 DNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLH 132
D+ LI L G +SE +L ++ ++ G+ P +Y Y+ L+ G ++ +
Sbjct: 212 DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVL 271
Query: 133 DEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTV 192
MI + F P + Y +I G C + +EA I + + + G PD V Y+T+
Sbjct: 272 HTMI--AWNHF-----PSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTM 324
Query: 193 ISWFHRNRELGKAYELKVEMDEKDI 217
I F LG A +L EM +K +
Sbjct: 325 IRGFCEKGWLGSARKLWFEMIKKGM 349
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 76/148 (51%), Gaps = 7/148 (4%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF 129
ILP++ + AL+LGL Q+G L EA L ++ SG D Y++++D +G +A
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
L +I+ TG +P V T+N+LI+GYC EA IL + GL P VSY
Sbjct: 489 ELFKVVIE-------TGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSY 541
Query: 190 STVISWFHRNRELGKAYELKVEMDEKDI 217
+T++ + EL+ EM + I
Sbjct: 542 TTLMDAYANCGNTKSIDELRREMKAEGI 569
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 14/185 (7%)
Query: 26 MIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXX-XXXXXXXXEGILPDNNGYSALILGL 84
M+D G++P V TY L I+P S ++ GL
Sbjct: 318 MLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP----CSVMLSGL 373
Query: 85 YQQGRLSEALDLFREMVRSGVLPDEYTYSLLMD-TCRLTGEFSKAFHLHDEMIQKSLTDF 143
+ GR+ EAL LF +M G+ PD YS+++ C+L G+F A L+DEM K +
Sbjct: 374 CKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL-GKFDMALWLYDEMCDKRIL-- 430
Query: 144 VTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELG 203
P T+ AL+ G C G +EA +L + G D V Y+ VI + ++ +
Sbjct: 431 -----PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485
Query: 204 KAYEL 208
+A EL
Sbjct: 486 EALEL 490
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 78/185 (42%), Gaps = 43/185 (23%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G++P ++ LI GL G ++EAL+L +M + GV PD TY++L L G S A
Sbjct: 252 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGA 311
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLG----------------------- 165
+ + +M+ K G SP V+TY L+ G C LG
Sbjct: 312 WEVIRDMLDK-------GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 364
Query: 166 -------------RFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEM 212
R EA+ + M GL PD V+YS VI + + A L EM
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 213 DEKDI 217
+K I
Sbjct: 425 CDKRI 429
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 11/147 (7%)
Query: 73 DNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLT-GEFSKAFH 130
+ + YS ++ GL +Q +L +A+ R + P +++ +M C+L + +K+F
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 131 LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYS 190
T G P V ++N LI+G C +G EA+ + M + G+ PD+V+Y+
Sbjct: 246 C---------TVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYN 296
Query: 191 TVISWFHRNRELGKAYELKVEMDEKDI 217
+ FH + A+E+ +M +K +
Sbjct: 297 ILAKGFHLLGMISGAWEVIRDMLDKGL 323
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 11/207 (5%)
Query: 2 AFTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXX 61
++ + I + + + A+ +M D G++P + T+ T
Sbjct: 427 SYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKL 486
Query: 62 XXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRL 121
G PD +S +I L + + +A D F+EM+ G+ P+E TY++L+ +C
Sbjct: 487 LV----HGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCS 542
Query: 122 TGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMG 181
TG+ ++ L +M + G SP + YNA I +C + + +A +L+ M +G
Sbjct: 543 TGDTDRSVKLFAKMKE-------NGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIG 595
Query: 182 LPPDAVSYSTVISWFHRNRELGKAYEL 208
L PD +YST+I + +A E+
Sbjct: 596 LKPDNFTYSTLIKALSESGRESEAREM 622
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G+ P NGY L+ L R SE ++M G+L Y+Y+ ++D
Sbjct: 384 RGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIEN 443
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A EM + G SP +VT+N + GY G + G+L + G PD +
Sbjct: 444 AAMFLTEMQDR-------GISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVI 496
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDEN 223
++S +I+ R +E+ A++ EM E W ++ N
Sbjct: 497 TFSLIINCLCRAKEIKDAFDCFKEMLE---WGIEPN 529
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 66/148 (44%), Gaps = 7/148 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+ P Y+A+I L + L A F++M G PD +TY++L+ G +A
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L +M Q+ G P V TY LI G+ GR EA+ L M L P+ +
Sbjct: 235 IRLVKQMEQE-------GNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEAT 287
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKD 216
T + R KA+E+ V EKD
Sbjct: 288 IRTFVHGIFRCLPPCKAFEVLVGFMEKD 315
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+L Y+A+I L + R+ A EM G+ P+ T++ + + G+ K
Sbjct: 419 DGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKK 478
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
+ ++++ V GF P V+T++ +I+ C +A + M E G+ P+ +
Sbjct: 479 VHGVLEKLL-------VHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEI 531
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDI 217
+Y+ +I + ++ +L +M E +
Sbjct: 532 TYNILIRSCCSTGDTDRSVKLFAKMKENGL 561
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 7/132 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G PD Y+ LI G+ ++G + EA+ L ++M + G P+ +TY++L+D + G +
Sbjct: 209 DGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDE 268
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A EM++ V +P T +HG +A +L G E V
Sbjct: 269 ALK-QLEMMR------VRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRV 321
Query: 188 SYSTVISWFHRN 199
Y V+ N
Sbjct: 322 GYDAVLYCLSNN 333
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 81/153 (52%), Gaps = 13/153 (8%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLT-GE-- 124
EG +P+ Y+A+I GL + G ++EA L +M +P++ TY +D LT GE
Sbjct: 711 EGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDI--LTKGEVD 768
Query: 125 FSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPP 184
KA LH+ +++ L + TYN LI G+C GR EA ++ M G+ P
Sbjct: 769 MQKAVELHNAILKGLLAN--------TATYNMLIRGFCRQGRIEEASELITRMIGDGVSP 820
Query: 185 DAVSYSTVISWFHRNRELGKAYELKVEMDEKDI 217
D ++Y+T+I+ R ++ KA EL M EK I
Sbjct: 821 DCITYTTMINELCRRNDVKKAIELWNSMTEKGI 853
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 13/204 (6%)
Query: 1 MAFTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXX 60
+ +TS +G K +KA ++Y +M G+ P++ T+ TL
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNE 532
Query: 61 XXXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCR 120
+ P+ Y+ +I G ++G +S+A + +EM G++PD Y+Y L+
Sbjct: 533 MAEW----NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC 588
Query: 121 LTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEM 180
LTG+ S+A D + K + + Y L+HG+C G+ EA+ + + M +
Sbjct: 589 LTGQASEAKVFVDGL-HKGNCELNE------ICYTGLLHGFCREGKLEEALSVCQEMVQR 641
Query: 181 GLPPDAVSYSTVI--SWFHRNREL 202
G+ D V Y +I S H++R+L
Sbjct: 642 GVDLDLVCYGVLIDGSLKHKDRKL 665
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 25 QMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYSALILGL 84
+MI+ + PTV TY +L +GI P ++ L+ GL
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG----KGIAPSIYTFTTLLSGL 517
Query: 85 YQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFV 144
++ G + +A+ LF EM V P+ TY+++++ G+ SKAF EM +K
Sbjct: 518 FRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK------ 571
Query: 145 TGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGK 204
G P +Y LIHG C G+ EA + G+ + + + Y+ ++ F R +L +
Sbjct: 572 -GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEE 630
Query: 205 AYELKVEMDEKDI 217
A + EM ++ +
Sbjct: 631 ALSVCQEMVQRGV 643
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+L + Y+ LI G +QGR+ EA +L M+ GV PD TY+ +++ + K
Sbjct: 781 KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L + M +K G P V YN LIHG C G +A + M GL P+
Sbjct: 841 AIELWNSMTEK-------GIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNK 893
Query: 188 SYSTVIS 194
+ T S
Sbjct: 894 TSRTTTS 900
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 9/150 (6%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSK 127
G+ P+ Y+ALI L + + EA LF M + G+ P++ TYS+L+D CR G+
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCR-RGKLDT 420
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A EM+ TG V YN+LI+G+C G A G + M L P V
Sbjct: 421 ALSFLGEMVD-------TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVV 473
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDI 217
+Y++++ + ++ KA L EM K I
Sbjct: 474 TYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 88/201 (43%), Gaps = 28/201 (13%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
PD Y L+ GL + L++ EM+ P E S L++ R G+ +A +L
Sbjct: 295 PDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNL 354
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
K + DF G SP + YNALI C +F EA + M ++GL P+ V+YS
Sbjct: 355 -----VKRVVDF--GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSI 407
Query: 192 VISWFHRNRELGKAYELKVEMDEKDI---------------WWLDENTRESLMKDLSD-- 234
+I F R +L A EM + + + D + E M ++ +
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467
Query: 235 ----VDTYTSVMNDYFAEGSI 251
V TYTS+M Y ++G I
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKI 488
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 72/144 (50%), Gaps = 9/144 (6%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYS-LLMDTCRLTGEFSKA 128
+LP+ SAL+ GL + A++LF +MV G+ PD Y Y+ ++ C L + S+A
Sbjct: 188 LLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELK-DLSRA 246
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
EMI TG +V YN LI G C + EA+GI + +A L PD V+
Sbjct: 247 ----KEMIAHMEA---TGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVT 299
Query: 189 YSTVISWFHRNRELGKAYELKVEM 212
Y T++ + +E E+ EM
Sbjct: 300 YCTLVYGLCKVQEFEIGLEMMDEM 323
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 43/168 (25%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGV------------------------------- 105
Y+ L+ G ++G+L EAL + +EMV+ GV
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674
Query: 106 ----LPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGY 161
PD+ Y+ ++D TG+F +AF + D MI + G P VTY A+I+G
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE-------GCVPNEVTYTAVINGL 727
Query: 162 CFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNR-ELGKAYEL 208
C G EA + M + P+ V+Y + + ++ KA EL
Sbjct: 728 CKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVEL 775
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 11/205 (5%)
Query: 11 FHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGI 70
F K D+ ++ +M+ G +P + TY L G+
Sbjct: 268 FRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREV----GV 323
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFH 130
P ++ LI GL + G+L E V+ G PD Y++++ GE KA
Sbjct: 324 EPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEE 383
Query: 131 LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYS 190
+ EM +K G P V TYN++I G+C G+F EA +L+ M G P+ V YS
Sbjct: 384 MFKEMTEK-------GQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYS 436
Query: 191 TVISWFHRNRELGKAYELKVEMDEK 215
T+++ ++ +A+E+ +M EK
Sbjct: 437 TLVNNLKNAGKVLEAHEVVKDMVEK 461
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 21/183 (11%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G PD Y+ ++ ++ G+ L EMV+ G PD YTY++L+ +
Sbjct: 251 DGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLA 310
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A +L + M + G P V+ + LI G G+ + ++G PD V
Sbjct: 311 ALNLLNHMRE-------VGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVV 363
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFA 247
Y+ +I+ + EL KA E+ EM EK L +V TY S++ +
Sbjct: 364 CYTVMITGYISGGELEKAEEMFKEMTEKG--------------QLPNVFTYNSMIRGFCM 409
Query: 248 EGS 250
G
Sbjct: 410 AGK 412
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
P + Y+A++ L + ++ +M+ G PD TY+++M G+ + + L
Sbjct: 220 PYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRL 279
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
DEM++ GFSP + TYN L+H + + A+ +L M E+G+ P + ++T
Sbjct: 280 LDEMVKD-------GFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTT 332
Query: 192 VISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEGSI 251
+I R +L E +++DE + DV YT ++ Y + G +
Sbjct: 333 LIDGLSRAGKL-----------EACKYFMDETVKVGCT---PDVVCYTVMITGYISGGEL 378
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 80/148 (54%), Gaps = 7/148 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI P+ Y++LI L GR S+A L +M+ + P+ T+S L+D G+ +
Sbjct: 284 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 343
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L+DEMI++S+ P + TY++LI+G+C R EA + M P+ V
Sbjct: 344 AEKLYDEMIKRSI-------DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 396
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEK 215
+Y+T+I F + + + + EL EM ++
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQR 424
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 88/198 (44%), Gaps = 11/198 (5%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
D+A ++ MI P V TY TL G++ +
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ----RGLVGNTVT 432
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ LI GL+Q G A +F++MV GV PD TYS+L+D G+ KA + E +
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF-EYL 491
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
QKS P + TYN +I G C G+ + + ++ G+ P+ + Y+T+IS F
Sbjct: 492 QKS------KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGF 545
Query: 197 HRNRELGKAYELKVEMDE 214
R +A L EM E
Sbjct: 546 CRKGLKEEADALFREMKE 563
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 46/194 (23%)
Query: 1 MAFTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXX 60
+ + S I + ++ + AS++ MI+ + P V T
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT----------------------- 327
Query: 61 XXXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCR 120
+SALI ++G+L EA L+ EM++ + PD +TYS L++
Sbjct: 328 ----------------FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 121 LTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEM 180
+ +A H+ + MI K P VVTYN LI G+C R E M + R M++
Sbjct: 372 MHDRLDEAKHMFELMISKDCF-------PNVVTYNTLIKGFCKAKRVEEGMELFREMSQR 424
Query: 181 GLPPDAVSYSTVIS 194
GL + V+Y+T+I
Sbjct: 425 GLVGNTVTYNTLIQ 438
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 21/178 (11%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G PD Y ++ GL ++G + AL L ++M + + D Y+ ++D +
Sbjct: 214 RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVND 273
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A +L EM K G P VVTYN+LI C GR+ +A +L M E + P+ V
Sbjct: 274 ALNLFTEMDNK-------GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 326
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDY 245
++S +I F + +L +A +L EM ++ I D+ TY+S++N +
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSID--------------PDIFTYSSLINGF 370
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 11/176 (6%)
Query: 18 KASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGY 77
+A K+Y +MI + P + TY +L + P+ Y
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS----KDCFPNVVTY 398
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
+ LI G + R+ E ++LFREM + G++ + TY+ L+ G+ A + +M+
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVI 193
G P ++TY+ L+ G C G+ +A+ + + + + PD +Y+ +I
Sbjct: 459 D-------GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 7/141 (4%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ LI ++ +L AL + +M++ G PD T S L++ S+A L D+M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM- 176
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
FV + P VT+N LIHG + EA+ ++ M G PD +Y TV++
Sbjct: 177 ------FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230
Query: 197 HRNRELGKAYELKVEMDEKDI 217
+ ++ A L +M++ I
Sbjct: 231 CKRGDIDLALSLLKKMEKGKI 251
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Query: 89 RLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVTGFS 148
+L +A+DLF EMV+S LP ++ L+ +F L + M + S
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRI-------S 112
Query: 149 PFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYEL 208
+ +YN LI+ +C + A+ +L M ++G PD V+ S++++ + + + +A L
Sbjct: 113 YDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 172
Query: 209 KVEM 212
+M
Sbjct: 173 VDQM 176
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 87/201 (43%), Gaps = 11/201 (5%)
Query: 7 IGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXX 66
IG + K D A KV Q++ PTV TY L
Sbjct: 200 IGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS--- 256
Query: 67 XEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFS 126
G+ PD Y+ +I G+ ++G + A ++ R + G PD +Y++L+ G++
Sbjct: 257 -RGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWE 315
Query: 127 KAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
+ L +M F P VVTY+ LI C G+ EAM +L+ M E GL PDA
Sbjct: 316 EGEKLMTKM-------FSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 368
Query: 187 VSYSTVISWFHRNRELGKAYE 207
SY +I+ F R L A E
Sbjct: 369 YSYDPLIAAFCREGRLDVAIE 389
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 11/192 (5%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
D+A K+ +M+ G+ P + TY T+ +G PD
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLEL----KGCEPDVIS 300
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ L+ L QG+ E L +M P+ TYS+L+ T G+ +A +L M
Sbjct: 301 YNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMK 360
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+K LT P +Y+ LI +C GR A+ L M G PD V+Y+TV++
Sbjct: 361 EKGLT-------PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATL 413
Query: 197 HRNRELGKAYEL 208
+N + +A E+
Sbjct: 414 CKNGKADQALEI 425
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ PD Y LI ++GRL A++ M+ G LPD Y+ ++ T G+ +
Sbjct: 362 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQ 421
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + ++ + G SP +YN + G + A+ ++ M G+ PD +
Sbjct: 422 ALEIFGKLGE-------VGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEI 474
Query: 188 SYSTVISWFHRNRELGKAYELKVEM 212
+Y+++IS R + +A+EL V+M
Sbjct: 475 TYNSMISCLCREGMVDEAFELLVDM 499
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 7/122 (5%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
PD Y+ +I L +G+L AL + +++ P TY++L++ L G +A L
Sbjct: 191 PDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKL 250
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
DEM+ + G P + TYN +I G C G A ++R + G PD +SY+
Sbjct: 251 MDEMLSR-------GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 192 VI 193
++
Sbjct: 304 LL 305
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 7/125 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G P+++ Y+ + L+ G AL + EM+ +G+ PDE TY+ ++ G +A
Sbjct: 433 GCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEA 492
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
F L +M F P VVTYN ++ G+C R +A+ +L M G P+ +
Sbjct: 493 FELLVDMRS-------CEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETT 545
Query: 189 YSTVI 193
Y+ +I
Sbjct: 546 YTVLI 550
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G LPD Y+ ++ L + G+ +AL++F ++ G P+ +Y+ + +G+ +
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A H+ EM+ G P +TYN++I C G EA +L M P V
Sbjct: 457 ALHMILEMMS-------NGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 188 SYSTVISWFHRNRELGKA 205
+Y+ V+ F + + A
Sbjct: 510 TYNIVLLGFCKAHRIEDA 527
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 7/144 (4%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
PD Y+ALI G + R+ +A + M PD TY++++ + G+ A +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
++++ + P V+TY LI G EA+ ++ M GL PD +Y+T
Sbjct: 216 LNQLLSDNC-------QPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT 268
Query: 192 VISWFHRNRELGKAYELKVEMDEK 215
+I + + +A+E+ ++ K
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELK 292
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 77/149 (51%), Gaps = 6/149 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G++ + Y+ LI GL+Q G A ++F+EMV GV PD TY++L+D G+ K
Sbjct: 10 RGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEK 69
Query: 128 AFHLHDEMIQKSLTDFVT----GFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLP 183
A L ++ F + G P VVTY +I G+C G EA + R M E G
Sbjct: 70 A--LVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPL 127
Query: 184 PDAVSYSTVISWFHRNRELGKAYELKVEM 212
PD+ +Y+T+I R+ + + EL EM
Sbjct: 128 PDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 18/158 (11%)
Query: 94 LDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVT 153
++LFREM + G++ + TY+ L+ G+ A + EM+ G P ++T
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSD-------GVPPDIMT 53
Query: 154 YNALIHGYCFLGRFVEAM---------GILRGMAEMGLPPDAVSYSTVISWFHRNRELGK 204
YN L+ G C G+ +A+ + ++ G+ P+ V+Y+T+IS F + +
Sbjct: 54 YNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEE 113
Query: 205 AYELKVEMDEKDIWWLDENTRESLMK-DLSDVDTYTSV 241
AY L +M E D D T +L++ L D D S
Sbjct: 114 AYTLFRKMKE-DGPLPDSGTYNTLIRAHLRDGDKAASA 150
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 28/178 (15%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
GI P+ Y+ IL L + ++ EA +F M + GVLP+ YTYS ++D TG +A
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA 288
Query: 129 FHLHDEMIQKSL-----------------TDFVT-----------GFSPFVVTYNALIHG 160
+ L+ E++ L + VT G P + YN LIHG
Sbjct: 289 YGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHG 348
Query: 161 YCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDIW 218
+C G +EA+G+L M + L PD +Y+ +I+ ++ +A L +M + I+
Sbjct: 349 HCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIF 406
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 21/183 (11%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+ P+ Y+ LI G + G + EA+ L EM + PD +TY++L++ + + ++A
Sbjct: 334 GVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEA 393
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L +M + + P TYN+LIHGYC +A+ + M G+ P+ ++
Sbjct: 394 NRLFQKMKNERIF-------PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIIT 446
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAE 248
+ST+I + R++ A L EM K I + DV TYT++++ +F E
Sbjct: 447 FSTLIDGYCNVRDIKAAMGLYFEMTIKGI--------------VPDVVTYTALIDAHFKE 492
Query: 249 GSI 251
++
Sbjct: 493 ANM 495
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 74/148 (50%), Gaps = 13/148 (8%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSL-LMDTCRLTG--E 124
G++PD + Y L ++QG S+ L EM G+ P+ Y Y++ ++D CR E
Sbjct: 193 RGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEE 252
Query: 125 FSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPP 184
K F E+++K G P + TY+A+I GYC G +A G+ + + L P
Sbjct: 253 AEKMF----ELMKKH------GVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLP 302
Query: 185 DAVSYSTVISWFHRNRELGKAYELKVEM 212
+ V + T++ F + REL A L V M
Sbjct: 303 NVVVFGTLVDGFCKARELVTARSLFVHM 330
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
E I P + Y++LI G ++ + +ALDL EM SGV P+ T+S L+D +
Sbjct: 403 ERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKA 462
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L+ EM + G P VVTY ALI + EA+ + M E G+ P+
Sbjct: 463 AMGLYFEMT-------IKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDH 515
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWW 219
+++ ++ F + L A + E +++ W
Sbjct: 516 TFACLVDGFWKEGRLSVAIDFYQENNQQRSCW 547
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 87/201 (43%), Gaps = 11/201 (5%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
++A + +M SGV P + T+ TL +GI+PD
Sbjct: 426 EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTI----KGIVPDVVT 481
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ALI +++ + EAL L+ +M+ +G+ P+++T++ L+D G S A + E
Sbjct: 482 YTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENN 541
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
Q+ GF+ LI G C G + A M G+ PD SY +++
Sbjct: 542 QQRSCWNHVGFT-------CLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGH 594
Query: 197 HRNRELGKAYELKVEMDEKDI 217
+ + + L+ +M + I
Sbjct: 595 LQEKRITDTMMLQCDMIKTGI 615
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 76/140 (54%), Gaps = 6/140 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G P+ +++LI GL ++G + +A ++ EMVR+G P+ YT++ L+D G KA
Sbjct: 282 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKA 341
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
F L ++++ + P V TY ++I GYC + A + M E GL P+ +
Sbjct: 342 FRLFLKLVRSD------TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNT 395
Query: 189 YSTVISWFHRNRELGKAYEL 208
Y+T+I+ + G+AYEL
Sbjct: 396 YTTLINGHCKAGSFGRAYEL 415
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 94/205 (45%), Gaps = 29/205 (14%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G++PD++ Y +++G ++ G++ EA M++ G +PD T +L++ G ++
Sbjct: 211 RGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNR 270
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A +MI GF P ++ + +LI G C G +A +L M G P+
Sbjct: 271 AIWYFRKMID-------LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVY 323
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESL------------------- 228
+++ +I + KA+ L +++ D + + +T S+
Sbjct: 324 THTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSR 383
Query: 229 MKD---LSDVDTYTSVMNDYFAEGS 250
MK+ +V+TYT+++N + GS
Sbjct: 384 MKEQGLFPNVNTYTTLINGHCKAGS 408
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 28/201 (13%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
P+ + Y+++I G ++ +L+ A LF M G+ P+ TY+ L++ G F +A+ L
Sbjct: 356 PNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYEL 415
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
+ M + GF P + TYNA I C R EA +L GL D V+Y+
Sbjct: 416 MNLMGDE-------GFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTI 468
Query: 192 VISWFHRNRELGKAYELKVEMD----EKDIW----WLDENTRESLMKD------------ 231
+I + ++ +A M+ E D+ + R+ MK+
Sbjct: 469 LIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLG 528
Query: 232 -LSDVDTYTSVMNDYFAEGSI 251
+ +TYTS+++ Y EG I
Sbjct: 529 LIPTKETYTSMISCYCKEGDI 549
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 96/243 (39%), Gaps = 32/243 (13%)
Query: 3 FTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXX 62
+TS IG K ++A ++ +M + G+ P V+TY TL
Sbjct: 361 YTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMG 420
Query: 63 XXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT---- 118
EG +P+ Y+A I L ++ R EA +L + G+ D TY++L+
Sbjct: 421 D----EGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQ 476
Query: 119 ----------CRLTGE-FSKAFHLHDEMI-----QKSLTD--------FVTGFSPFVVTY 154
CR+ F L++ +I QK + + G P TY
Sbjct: 477 NDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETY 536
Query: 155 NALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDE 214
++I YC G A+ M G PD+ +Y ++IS + + +A +L M +
Sbjct: 537 TSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMID 596
Query: 215 KDI 217
+ +
Sbjct: 597 RGL 599
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 6/138 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI P+ YS LI L G++ A +M++ G P+ YT S L+ C L G
Sbjct: 275 KGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFD 334
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L ++MI+ G P VV YN L+ G+C G V+A+ + M E+G P+
Sbjct: 335 ALDLWNQMIRG------FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIR 388
Query: 188 SYSTVISWFHRNRELGKA 205
+Y ++I+ F + L A
Sbjct: 389 TYGSLINGFAKRGSLDGA 406
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G P+ Y +LI G ++G L A+ ++ +M+ SG P+ Y+ +++ +F +A
Sbjct: 382 GCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEA 441
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMG-LPPDAV 187
L + M +++ +P V T+NA I G C GR A + R M + PP+ V
Sbjct: 442 ESLIEIMSKENC-------APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIV 494
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWW 219
+Y+ ++ + + +AY L E+ + + W
Sbjct: 495 TYNELLDGLAKANRIEEAYGLTREIFMRGVEW 526
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 12/148 (8%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G P+ Y+ L+ L + ++ A L EM G PD +Y+ ++ + G +
Sbjct: 175 DGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKE 234
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
L + F P V YNALI+G C + A ++R M E G+ P+ +
Sbjct: 235 GRELAER------------FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVI 282
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEK 215
SYST+I+ + ++ A+ +M ++
Sbjct: 283 SYSTLINVLCNSGQIELAFSFLTQMLKR 310
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 13/211 (6%)
Query: 25 QMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYSALILGL 84
+M++ G++P V +Y TL G P+ S+L+ G
Sbjct: 271 EMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLK----RGCHPNIYTLSSLVKGC 326
Query: 85 YQQGRLSEALDLFREMVRS-GVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDF 143
+ +G +ALDL+ +M+R G+ P+ Y+ L+ G KA + M +
Sbjct: 327 FLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEE------ 380
Query: 144 VTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELG 203
G SP + TY +LI+G+ G A+ I M G P+ V Y+ ++ R+ +
Sbjct: 381 -IGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFK 439
Query: 204 KAYELKVEMDEKDIWWLDENTRESLMKDLSD 234
+A L +E+ K+ T + +K L D
Sbjct: 440 EAESL-IEIMSKENCAPSVPTFNAFIKGLCD 469
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 76/193 (39%), Gaps = 12/193 (6%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
D A ++ +M+ SG P V Y + E P
Sbjct: 404 DGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSK----ENCAPSVPT 459
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDE-YTYSLLMDTCRLTGEFSKAFHLHDEM 135
++A I GL GRL A +FR+M + P TY+ L+D +A+ L E+
Sbjct: 460 FNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREI 519
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISW 195
F+ G TYN L+HG C G A+ ++ M G PD ++ + +I
Sbjct: 520 -------FMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILA 572
Query: 196 FHRNRELGKAYEL 208
+ + + +A ++
Sbjct: 573 YCKQGKAERAAQM 585
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 75/147 (51%), Gaps = 7/147 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD ++ L+ GL + R+SEAL+L MV G P T + L++ L G+ S A
Sbjct: 153 GYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDA 212
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L D M++ TGF P VTY +++ C G+ AM +LR M E + DAV
Sbjct: 213 VVLIDRMVE-------TGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEK 215
YS +I ++ L A+ L EM+ K
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIK 292
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 77/143 (53%), Gaps = 7/143 (4%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF 129
I P+ +S LI ++G+L EA L +EM++ G+ P+ TY+ L+D +A
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
+ D MI K G P ++T+N LI+GYC R + + + R M+ G+ + V+Y
Sbjct: 389 QMVDLMISK-------GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTY 441
Query: 190 STVISWFHRNRELGKAYELKVEM 212
+T++ F ++ +L A +L EM
Sbjct: 442 NTLVQGFCQSGKLEVAKKLFQEM 464
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 7/145 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G D Y+ LI G GR + L R+M++ + P+ T+S+L+D+ G+ +
Sbjct: 292 KGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLRE 351
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L EM+Q+ G +P +TYN+LI G+C R EA+ ++ M G PD +
Sbjct: 352 ADQLLKEMMQR-------GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM 404
Query: 188 SYSTVISWFHRNRELGKAYELKVEM 212
+++ +I+ + + + EL EM
Sbjct: 405 TFNILINGYCKANRIDDGLELFREM 429
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G P+ Y ++ + + G+ + A++L R+M + D YS+++D G A
Sbjct: 223 GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNA 282
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
F+L +EM + GF ++TYN LI G+C GR+ + +LR M + + P+ V+
Sbjct: 283 FNLFNEM-------EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDI 217
+S +I F + +L +A +L EM ++ I
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGI 364
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 7/148 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G++ + Y+ L+ G Q G+L A LF+EMV V PD +Y +L+D GE K
Sbjct: 432 RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + + I+KS + G Y +IHG C + +A + + G+ DA
Sbjct: 492 ALEIFGK-IEKSKMELDIGI------YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDAR 544
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEK 215
+Y+ +IS R L KA L +M E+
Sbjct: 545 AYNIMISELCRKDSLSKADILFRKMTEE 572
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 11/204 (5%)
Query: 14 LKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPD 73
+K D A ++ MI S PTV + L +GI
Sbjct: 67 IKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMES----KGIAHS 122
Query: 74 NNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHD 133
S +I + +LS A ++++ G PD ++ L++ L S+A L D
Sbjct: 123 IYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVD 182
Query: 134 EMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVI 193
M++ G P ++T N L++G C G+ +A+ ++ M E G P+ V+Y V+
Sbjct: 183 RMVE-------MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVL 235
Query: 194 SWFHRNRELGKAYELKVEMDEKDI 217
+ ++ + A EL +M+E++I
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNI 259
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 81/194 (41%), Gaps = 11/194 (5%)
Query: 15 KPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDN 74
K +A ++ +M+ G+ P TY +L +G PD
Sbjct: 348 KLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS----KGCDPDI 403
Query: 75 NGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDE 134
++ LI G + R+ + L+LFREM GV+ + TY+ L+ +G+ A L E
Sbjct: 404 MTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQE 463
Query: 135 MIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
M+ + + P +V+Y L+ G C G +A+ I + + + D Y +I
Sbjct: 464 MVSRRV-------RPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIH 516
Query: 195 WFHRNRELGKAYEL 208
++ A++L
Sbjct: 517 GMCNASKVDDAWDL 530
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 6/138 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI PD Y+ LI L GR S+A L +M+ + PD ++ L+D G+ +
Sbjct: 279 KGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVE 338
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L+DEM+ KS F P VV YN LI G+C R E M + R M++ GL + V
Sbjct: 339 AEKLYDEMV-KSKHCF-----PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 392
Query: 188 SYSTVISWFHRNRELGKA 205
+Y+T+I F + R+ A
Sbjct: 393 TYTTLIHGFFQARDCDNA 410
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 11/219 (5%)
Query: 12 HWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGIL 71
H + +A + QM++ G P T+ TL +G
Sbjct: 157 HGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV----KGCQ 212
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
PD Y A+I GL ++G AL+L +M + + D Y+ ++D AF L
Sbjct: 213 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDL 272
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
++M K G P V TYN LI C GR+ +A +L M E + PD V ++
Sbjct: 273 FNKMETK-------GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNA 325
Query: 192 VISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMK 230
+I F + +L +A +L EM + + D +L+K
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIK 364
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 7/140 (5%)
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
++L+ G R+SEA+ L +MV G PD T++ L+ + S+A L + M+
Sbjct: 149 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMV- 207
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFH 197
V G P +VTY A+I+G C G A+ +L M + + D V Y+T+I
Sbjct: 208 ------VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLC 261
Query: 198 RNRELGKAYELKVEMDEKDI 217
+ + + A++L +M+ K I
Sbjct: 262 KYKHMDDAFDLFNKMETKGI 281
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 7/147 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G++ + Y+ LI G +Q A +F++MV GV PD TY++L+D G
Sbjct: 385 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVET 444
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + + M ++ + +VTY +I C G+ + + ++ G+ P+ V
Sbjct: 445 ALVVFEYMQKRDM-------KLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVV 497
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDE 214
+Y+T++S F R +A L VEM E
Sbjct: 498 TYTTMMSGFCRKGLKEEADALFVEMKE 524
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 72/137 (52%), Gaps = 9/137 (6%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSKAFHLHDEM 135
+S L+ + + + + L +M G+ + YTYS+ ++ CR + + S A + +M
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRS-QLSLALAILGKM 136
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISW 195
++ G+ P +VT N+L++G+C R EA+ ++ M EMG PD V+++T++
Sbjct: 137 MK-------LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG 189
Query: 196 FHRNRELGKAYELKVEM 212
++ + +A L M
Sbjct: 190 LFQHNKASEAVALVERM 206
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 21/178 (11%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
PD Y+ LI G + R+ E +++FREM + G++ + TY+ L + G F
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL-----IHGFFQARDCD 408
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
+ +M+ K + G P ++TYN L+ G C G A+ + M + + D V+Y+T
Sbjct: 409 NAQMVFKQMVS--DGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTT 466
Query: 192 VISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEG 249
+I + ++ ++L + K + +V TYT++M+ + +G
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVK--------------PNVVTYTTMMSGFCRKG 510
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 29/205 (14%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
D+ S +Y +MI GV+P V L I D
Sbjct: 111 DQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRV-------ISIDTVT 163
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEM- 135
Y+ +I GL + G EA EMV+ G+LPD +Y+ L+D G F +A L DE+
Sbjct: 164 YNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS 223
Query: 136 -------------------IQKSLTDFV-TGFSPFVVTYNALIHGYCFLGRFVEAMGILR 175
I+++ D V +GF P VVT++++I+ C G+ +E +LR
Sbjct: 224 ELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLR 283
Query: 176 GMAEMGLPPDAVSYSTVI-SWFHRN 199
M EM + P+ V+Y+T++ S F N
Sbjct: 284 EMEEMSVYPNHVTYTTLVDSLFKAN 308
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 13/189 (6%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
GI D Y+ L+ GL++ G L EA F+ ++ +P+ TY+ L+D G+ S
Sbjct: 323 RGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSS 382
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + +M++KS+ P VVTY+++I+GY G EA+ +LR M + + P+
Sbjct: 383 AEFIITQMLEKSVI-------PNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGF 435
Query: 188 SYSTVISWFHRNRELGKAYELKVEMD----EKDIWWLDENTRESLMKDLSDVDTYTSVMN 243
+Y TVI + + A EL EM E++ + LD +K + + ++
Sbjct: 436 TYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNH--LKRIGRIKEVKGLVK 493
Query: 244 DYFAEGSIL 252
D ++G L
Sbjct: 494 DMVSKGVTL 502
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 27/182 (14%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
GI P+ Y+ +I GL G + E EM G+ PD++TY+ L+ G +
Sbjct: 743 GISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGS 802
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
++ EMI G P TYN LI + +G+ ++A +L+ M + G+ P+ +
Sbjct: 803 MTIYCEMI-------ADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTST 855
Query: 189 YSTVIS------------WFHRNRELGKAYELKVEMDE--------KDIWWLDENTRESL 228
Y T+IS W + L +A L EM E + I+W+ +
Sbjct: 856 YCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPG 915
Query: 229 MK 230
MK
Sbjct: 916 MK 917
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 25/199 (12%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDL-FREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G++PD+ +++LI G + + + L + +M+ GV PD + ++L+ + G S
Sbjct: 88 GVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSF 147
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L + S VTYN +I G C G EA L M +MG+ PD V
Sbjct: 148 AISLLRNRV----------ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTV 197
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDE-------------KDIWWLDENTRESLMKDL-S 233
SY+T+I F + +A L E+ E ++ ++E R+ +M
Sbjct: 198 SYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDP 257
Query: 234 DVDTYTSVMNDYFAEGSIL 252
DV T++S++N G +L
Sbjct: 258 DVVTFSSIINRLCKGGKVL 276
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 75/148 (50%), Gaps = 7/148 (4%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF 129
+ P++ Y+ L+ L++ AL L+ +MV G+ D Y++LMD G+ +A
Sbjct: 290 VYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAE 349
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
+++ + P VVTY AL+ G C G A I+ M E + P+ V+Y
Sbjct: 350 KTFKMLLEDNQV-------PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTY 402
Query: 190 STVISWFHRNRELGKAYELKVEMDEKDI 217
S++I+ + + L +A L +M+++++
Sbjct: 403 SSMINGYVKKGMLEEAVSLLRKMEDQNV 430
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+ ++P+ YS++I G ++G L EA+ L R+M V+P+ +TY ++D G+
Sbjct: 393 KSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEM 452
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L EM + G +AL++ +GR E G+++ M G+ D +
Sbjct: 453 AIELSKEM-------RLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQI 505
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWW 219
+Y+++I F + + A EM E+ + W
Sbjct: 506 NYTSLIDVFFKGGDEEAALAWAEEMQERGMPW 537
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 23/174 (13%)
Query: 18 KASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGY 77
KA Y M+++G++P V TY T+ G+ PD+ Y
Sbjct: 731 KALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKS----RGMRPDDFTY 786
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
+ALI G + G + ++ ++ EM+ G++P TY++L+ G+ +A L EM +
Sbjct: 787 NALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGK 846
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGR------------FVEAMGILRGMAE 179
+ G SP TY +I G C L EA G+L+ M E
Sbjct: 847 R-------GVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVE 893
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 7/150 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G +PD +++L+ G + + +AL + M+ +G+ P+ TY+ ++ G +
Sbjct: 707 RGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKE 766
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
EM + G P TYNALI G +G +M I M GL P
Sbjct: 767 VDKWLSEMKSR-------GMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTS 819
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDI 217
+Y+ +IS F ++ +A EL EM ++ +
Sbjct: 820 TYNVLISEFANVGKMLQARELLKEMGKRGV 849
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 7/146 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G PD+ Y LI GL + GR+ EA LF EMV P TY+ L++ + +
Sbjct: 186 RGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDE 245
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A +EM K G P V TY++L+ G C GR ++AM + M G P+ V
Sbjct: 246 AMRYLEEMKSK-------GIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMV 298
Query: 188 SYSTVISWFHRNRELGKAYELKVEMD 213
+Y+T+I+ + +++ +A EL M+
Sbjct: 299 TYTTLITGLCKEQKIQEAVELLDRMN 324
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 22/182 (12%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSKAFH 130
P Y ++ L ++ +L+ A ++ M G+ P + ++L+ CR G
Sbjct: 119 PSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLK 178
Query: 131 LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYS 190
+ EM ++ G P TY LI G C GR EA + M E P V+Y+
Sbjct: 179 IFLEMPKR-------GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYT 231
Query: 191 TVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEGS 250
++I+ ++ + +A EM K I +V TY+S+M+ +G
Sbjct: 232 SLINGLCGSKNVDEAMRYLEEMKSKGIE--------------PNVFTYSSLMDGLCKDGR 277
Query: 251 IL 252
L
Sbjct: 278 SL 279
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 82/208 (39%), Gaps = 5/208 (2%)
Query: 1 MAFTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXX 60
+ +TS I + D+A + +M G+ P V TY +L
Sbjct: 228 VTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEM 287
Query: 61 XXXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCR 120
G P+ Y+ LI GL ++ ++ EA++L M G+ PD Y ++
Sbjct: 288 MMA----RGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFC 343
Query: 121 LTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEM 180
+F +A + DEMI +T ++ V T N ++ G C A + M
Sbjct: 344 AISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSR 402
Query: 181 GLPPDAVSYSTVISWFHRNRELGKAYEL 208
G+ + + +++ + E KA +L
Sbjct: 403 GISVEVETLESLVKCLCKKGEFQKAVQL 430
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 82/145 (56%), Gaps = 14/145 (9%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMV-RSGVLPDEYTYSLLMDT-CRLTGEFSKAF 129
P++ YS L+ L+ R EA++LF +M+ + G+ PD T++++++ CR GE +A
Sbjct: 230 PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCR-AGEVERA- 287
Query: 130 HLHDEMIQKSLTDFV--TGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
K + DF+ G +P V Y+AL++G+C +G+ EA + + GL D V
Sbjct: 288 --------KKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTV 339
Query: 188 SYSTVISWFHRNRELGKAYELKVEM 212
Y+T+++ F RN E +A +L EM
Sbjct: 340 GYTTLMNCFCRNGETDEAMKLLGEM 364
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSK 127
G P+ YSAL+ G + G++ EA F E+ ++G+ D Y+ LM+ CR GE +
Sbjct: 298 GCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCR-NGETDE 356
Query: 128 AFHLHDEM-IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
A L EM + D +TYN ++ G GR EA+ +L G+ +
Sbjct: 357 AMKLLGEMKASRCRAD--------TLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNK 408
Query: 187 VSYSTVISWFHRNRELGKAYELKVEMDEKDIW 218
SY +++ N EL KA + M E+ IW
Sbjct: 409 GSYRIILNALCCNGELEKAVKFLSVMSERGIW 440
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 7/132 (5%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ ++ GL +GR EAL + + GV ++ +Y ++++ GE KA M
Sbjct: 376 YNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMS 435
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
++ G P T+N L+ C G + +L G +GL P S+ V+
Sbjct: 436 ER-------GIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESI 488
Query: 197 HRNRELGKAYEL 208
+ R+L +EL
Sbjct: 489 CKERKLVHVFEL 500
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 7/146 (4%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
PD Y+++I G + G++ EA L +M+R G+ P T+++L+D GE A +
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
+MI G P VVT+ +LI GYC +G+ + + M G+ P+A +YS
Sbjct: 335 RGKMIS-------FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 192 VISWFHRNRELGKAYELKVEMDEKDI 217
+I+ L KA EL ++ KDI
Sbjct: 388 LINALCNENRLLKARELLGQLASKDI 413
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 20/179 (11%)
Query: 73 DNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLH 132
D ++ LI GL G+ +AL+L M G PD TY+ L+ + E +KA +
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 133 DEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTV 192
++ S+ SP VVTY ++I GYC G+ EA +L M +G+ P V+++ +
Sbjct: 265 KDVKSGSVC------SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVL 318
Query: 193 ISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEGSI 251
+ + + E+ A E++ +M + DV T+TS+++ Y G +
Sbjct: 319 VDGYAKAGEMLTAEEIRGKMISFGCF--------------PDVVTFTSLIDGYCRVGQV 363
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 7/141 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G+ P+ YS LI L + RL +A +L ++ ++P + Y+ ++D G+ ++
Sbjct: 376 RGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNE 435
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + +EM +K P +T+ LI G+C GR EA+ I M +G PD +
Sbjct: 436 ANVIVEEMEKKKC-------KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKI 488
Query: 188 SYSTVISWFHRNRELGKAYEL 208
+ S+++S + +AY L
Sbjct: 489 TVSSLLSCLLKAGMAKEAYHL 509
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 10/152 (6%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVL--PDEYTYSLLMDTCRLTGEFS 126
G PD Y+ LI G + L++A ++F++ V+SG + PD TY+ ++ G+
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 127 KAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
+A L D+M++ G P VT+N L+ GY G + A I M G PD
Sbjct: 295 EASSLLDDMLR-------LGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDV 347
Query: 187 VSYSTVISWFHRNRELGKAYELKVEMDEKDIW 218
V+++++I + R ++ + + L EM+ + ++
Sbjct: 348 VTFTSLIDGYCRVGQVSQGFRLWEEMNARGMF 379
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 24/185 (12%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ P+N L+ ++G+L A L + V + L++T
Sbjct: 132 DGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFE--VEGCCMVVNSLLNTLVKLDRVED 189
Query: 128 AFHLHDEMIQ-KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
A L DE ++ +S D T+N LI G C +G+ +A+ +L M+ G PD
Sbjct: 190 AMKLFDEHLRFQSCND--------TKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDI 241
Query: 187 VSYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYF 246
V+Y+T+I F ++ EL KA E+ ++ + DV TYTS+++ Y
Sbjct: 242 VTYNTLIQGFCKSNELNKASEMFKDVKSGSVCS-------------PDVVTYTSMISGYC 288
Query: 247 AEGSI 251
G +
Sbjct: 289 KAGKM 293
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 7/146 (4%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
PD Y+++I G + G++ EA L +M+R G+ P T+++L+D GE A +
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
+MI G P VVT+ +LI GYC +G+ + + M G+ P+A +YS
Sbjct: 335 RGKMIS-------FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 192 VISWFHRNRELGKAYELKVEMDEKDI 217
+I+ L KA EL ++ KDI
Sbjct: 388 LINALCNENRLLKARELLGQLASKDI 413
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 20/179 (11%)
Query: 73 DNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLH 132
D ++ LI GL G+ +AL+L M G PD TY+ L+ + E +KA +
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 133 DEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTV 192
++ S+ SP VVTY ++I GYC G+ EA +L M +G+ P V+++ +
Sbjct: 265 KDVKSGSVC------SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVL 318
Query: 193 ISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEGSI 251
+ + + E+ A E++ +M + DV T+TS+++ Y G +
Sbjct: 319 VDGYAKAGEMLTAEEIRGKMISFGCF--------------PDVVTFTSLIDGYCRVGQV 363
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 7/141 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G+ P+ YS LI L + RL +A +L ++ ++P + Y+ ++D G+ ++
Sbjct: 376 RGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNE 435
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + +EM +K P +T+ LI G+C GR EA+ I M +G PD +
Sbjct: 436 ANVIVEEMEKKKC-------KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKI 488
Query: 188 SYSTVISWFHRNRELGKAYEL 208
+ S+++S + +AY L
Sbjct: 489 TVSSLLSCLLKAGMAKEAYHL 509
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 10/152 (6%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVL--PDEYTYSLLMDTCRLTGEFS 126
G PD Y+ LI G + L++A ++F++ V+SG + PD TY+ ++ G+
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 127 KAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
+A L D+M++ G P VT+N L+ GY G + A I M G PD
Sbjct: 295 EASSLLDDMLR-------LGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDV 347
Query: 187 VSYSTVISWFHRNRELGKAYELKVEMDEKDIW 218
V+++++I + R ++ + + L EM+ + ++
Sbjct: 348 VTFTSLIDGYCRVGQVSQGFRLWEEMNARGMF 379
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 24/185 (12%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ P+N L+ ++G+L A L + V + L++T
Sbjct: 132 DGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFE--VEGCCMVVNSLLNTLVKLDRVED 189
Query: 128 AFHLHDEMIQ-KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
A L DE ++ +S D T+N LI G C +G+ +A+ +L M+ G PD
Sbjct: 190 AMKLFDEHLRFQSCND--------TKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDI 241
Query: 187 VSYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYF 246
V+Y+T+I F ++ EL KA E+ ++ + DV TYTS+++ Y
Sbjct: 242 VTYNTLIQGFCKSNELNKASEMFKDVKSGSVCS-------------PDVVTYTSMISGYC 288
Query: 247 AEGSI 251
G +
Sbjct: 289 KAGKM 293
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 12/215 (5%)
Query: 1 MAFTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXX 60
+++ S I + + K +A + +M+ +GV P + TY L
Sbjct: 332 ISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGS 391
Query: 61 XXXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCR 120
+G +P Y+ LI + G++ + L EM R G++PD TY+ L+
Sbjct: 392 VKG----QGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLC 447
Query: 121 LTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEM 180
G A L D++ K L D VT++ L+ GYC G +A +L+ M++M
Sbjct: 448 RNGNIEAAKKLFDQLTSKGLPDL--------VTFHILMEGYCRKGESRKAAMLLKEMSKM 499
Query: 181 GLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEK 215
GL P ++Y+ V+ + + L A ++ +M+++
Sbjct: 500 GLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKE 534
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 82/141 (58%), Gaps = 10/141 (7%)
Query: 80 LILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKS 139
L++ L ++ R ++ +++EM+R + P+ +T++++++ TG+ +KA + ++M
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMK--- 250
Query: 140 LTDFVTGFSPFVVTYNALIHGYCFL---GRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
V G SP VV+YN LI GYC L G+ +A +L+ M E + P+ +++ +I F
Sbjct: 251 ----VYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGF 306
Query: 197 HRNRELGKAYELKVEMDEKDI 217
++ L + ++ EM ++D+
Sbjct: 307 WKDDNLPGSMKVFKEMLDQDV 327
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 35/208 (16%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+ + P+ Y++LI GL G++SEA+ + +MV +GV P+ TY+ L++ F K
Sbjct: 325 QDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALING------FCK 378
Query: 128 AFHLHDEMIQKSLTDFVT----GFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLP 183
++M++++L F + G P YN LI YC LG+ + + M G+
Sbjct: 379 -----NDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 184 PDAVSYSTVISWFHRNRELGKAYELKVEMDEKDI------------WWLDENTRES--LM 229
PD +Y+ +I+ RN + A +L ++ K + + +R++ L+
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLL 493
Query: 230 KDLSDVD------TYTSVMNDYFAEGSI 251
K++S + TY VM Y EG++
Sbjct: 494 KEMSKMGLKPRHLTYNIVMKGYCKEGNL 521
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 103/249 (41%), Gaps = 22/249 (8%)
Query: 3 FTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXX 62
F I + K +KA V M G +P V +Y TL
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLK 285
Query: 63 XXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLT 122
+ + P+ ++ LI G ++ L ++ +F+EM+ V P+ +Y+ L++
Sbjct: 286 EMVEND-VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNG 344
Query: 123 GEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGL 182
G+ S+A + D+M+ G P ++TYNALI+G+C EA+ + + G
Sbjct: 345 GKISEAISMRDKMVS-------AGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGA 397
Query: 183 PPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVM 242
P Y+ +I + + ++ + LK EM+ + I + DV TY ++
Sbjct: 398 VPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI--------------VPDVGTYNCLI 443
Query: 243 NDYFAEGSI 251
G+I
Sbjct: 444 AGLCRNGNI 452
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 69/155 (44%), Gaps = 32/155 (20%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFS 126
EGI+PD Y+ LI GL + G + A LF ++ G LPD T+ +LM+ CR GE
Sbjct: 430 EGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCR-KGESR 487
Query: 127 KAFHLHDEMIQ-----------------------KSLTDFVTGFSP------FVVTYNAL 157
KA L EM + K+ T+ T V +YN L
Sbjct: 488 KAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVL 547
Query: 158 IHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTV 192
+ GY G+ +A +L M E GL P+ ++Y V
Sbjct: 548 LQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 78/147 (53%), Gaps = 10/147 (6%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSG-VLPDEYTYSLLMDT-CRLTGEF 125
+G D GYSA++ L ++GR+SEA DL EM+ G PD TY+ +++ CRL GE
Sbjct: 412 KGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRL-GEV 470
Query: 126 SKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPD 185
KA L M G P V+Y AL++G C G+ +EA ++ E P+
Sbjct: 471 DKAKKLLQVM-------HTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPN 523
Query: 186 AVSYSTVISWFHRNRELGKAYELKVEM 212
+++YS ++ R +L +A ++ EM
Sbjct: 524 SITYSVIMHGLRREGKLSEACDVVREM 550
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 7/169 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
GI +S +++ + G+L +AL + M R+GV P+ + +D K
Sbjct: 236 RGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEK 295
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + M V G P VVTYN +I GYC L R EA+ +L M G PD V
Sbjct: 296 ALRFLERM-------QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKV 348
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVD 236
SY T++ + + + + + +L +M ++ D+ T +L+ L+ D
Sbjct: 349 SYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHD 397
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 20/183 (10%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G++PD Y+ LI L + EAL ++ G D+ YS ++ G S+A
Sbjct: 378 GLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEA 437
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L +EM+ K P VVTY A+++G+C LG +A +L+ M G P+ VS
Sbjct: 438 KDLINEMLSKG------HCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVS 491
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAE 248
Y+ +++ R GK+ E + M+ + W N+ TY+ +M+ E
Sbjct: 492 YTALLNGMCRT---GKSLEAREMMNMSEEHWWSPNS-----------ITYSVIMHGLRRE 537
Query: 249 GSI 251
G +
Sbjct: 538 GKL 540
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
P++ YS ++ GL ++G+LSEA D+ REMV G P +LL+ + G +A
Sbjct: 522 PNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKF 581
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
+E + K G + VV + +IHG+C A+ +L M + D +Y+T
Sbjct: 582 MEECLNK-------GCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTT 634
Query: 192 VISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEGSI 251
++ + + +A EL +M K I D + V TY +V++ Y G +
Sbjct: 635 LVDTLGKKGRIAEATELMKKMLHKGI-------------DPTPV-TYRTVIHRYCQMGKV 680
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G P+ Y+AL+ G+ + G+ EA ++ P+ TYS++M R G+ S+A
Sbjct: 484 GHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEA 543
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+ EM+ K GF P V N L+ C GR EA + G + V+
Sbjct: 544 CDVVREMVLK-------GFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVN 596
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAE 248
++TVI F +N EL A + +D D++ ++++ +DV TYT++++ +
Sbjct: 597 FTTVIHGFCQNDELDAALSV---LD--DMYLINKH---------ADVFTYTTLVDTLGKK 642
Query: 249 GSI 251
G I
Sbjct: 643 GRI 645
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 76 GYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEM 135
++ +I G Q L AL + +M D +TY+ L+DT G ++A L +M
Sbjct: 596 NFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKM 655
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGM 177
+ K G P VTY +IH YC +G+ + + IL M
Sbjct: 656 LHK-------GIDPTPVTYRTVIHRYCQMGKVDDLVAILEKM 690
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 92/182 (50%), Gaps = 18/182 (9%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREM--VRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+ PD ++ +I L + G+ S+ALDLF M R+ PD T++ +M + GE
Sbjct: 147 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIEN 206
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
+ + M+ + G P +V+YNAL+ Y G A+ +L + + G+ PD V
Sbjct: 207 CRAVFEAMVAE-------GLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVV 259
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFA 247
SY+ +++ + R+R+ GKA E+ + M + E + +++ + +D Y S N + A
Sbjct: 260 SYTCLLNSYGRSRQPGKAKEVFLMMRK-------ERRKPNVVTYNALIDAYGS--NGFLA 310
Query: 248 EG 249
E
Sbjct: 311 EA 312
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 13/137 (9%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT---CRLTGE 124
EG+ P+ Y+AL+ G AL + ++ ++G++PD +Y+ L+++ R G+
Sbjct: 217 EGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGK 276
Query: 125 FSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPP 184
+ F + + +K P VVTYNALI Y G EA+ I R M + G+ P
Sbjct: 277 AKEVFLMMRKERRK----------PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKP 326
Query: 185 DAVSYSTVISWFHRNRE 201
+ VS T+++ R+++
Sbjct: 327 NVVSVCTLLAACSRSKK 343
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 30/201 (14%)
Query: 74 NNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHD 133
N+ Y+ +I + + +A LF EM + PD TY L++ G++ A +L D
Sbjct: 11 NDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMD 70
Query: 134 EMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVI 193
+M++ ++ +P TYN LI+ G + EA+ + + M + G+ PD V+++ V+
Sbjct: 71 DMLRAAI-------APSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVL 123
Query: 194 SWFHRNRELGKA---YEL----KVEMDEKD----IWWLDE------------NTRESLMK 230
S + R+ KA +EL KV D I+ L + + RE +
Sbjct: 124 SAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAE 183
Query: 231 DLSDVDTYTSVMNDYFAEGSI 251
DV T+TS+M+ Y +G I
Sbjct: 184 CRPDVVTFTSIMHLYSVKGEI 204
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 13/201 (6%)
Query: 18 KASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGY 77
+A +++ QM G+ P V + TL GI + Y
Sbjct: 311 EAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS----RGINLNTAAY 366
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMD-TCRLTGEFSKAFHLHDEMI 136
++ I L +A+ L++ M + V D T+++L+ +CR++ ++ +A EM
Sbjct: 367 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMS-KYPEAISYLKEM- 424
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
D + V Y++++ Y G+ EA I M G PD ++Y++++ +
Sbjct: 425 ----EDLSIPLTKEV--YSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAY 478
Query: 197 HRNRELGKAYELKVEMDEKDI 217
+ + + GKA EL +EM+ I
Sbjct: 479 NASEKWGKACELFLEMEANGI 499
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G P+ Y+ALI + ++S A +LF M+ G LP+ TYS L+D G+ KA
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKA 607
Query: 129 FHLHDEMI-QKSLTDFVTGFS--------PFVVTYNALIHGYCFLGRFVEAMGILRGMAE 179
+ + M K + D F P VVTY AL+ G+C R EA +L M+
Sbjct: 608 CQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSM 667
Query: 180 MGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDE 214
G P+ + Y +I + +L +A E+K EM E
Sbjct: 668 EGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 702
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G +PD + YS ++ L ++ A LF EM R G++ D YTY++++D+ G +
Sbjct: 477 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 536
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A +EM + G +P VVTY ALIH Y + A + M G P+ V
Sbjct: 537 ARKWFNEMRE-------VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV 589
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMND 244
+YS +I + ++ KA ++ M KD+ DVD Y +D
Sbjct: 590 TYSALIDGHCKAGQVEKACQIFERMCGS--------------KDVPDVDMYFKQYDD 632
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 84/202 (41%), Gaps = 28/202 (13%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
++A K + +M + G TP V TY L EG LP+
Sbjct: 535 EQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS----EGCLPNIVT 590
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPD------EY----------TYSLLMDTCR 120
YSALI G + G++ +A +F M S +PD +Y TY L+D
Sbjct: 591 YSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFC 650
Query: 121 LTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEM 180
+ +A L D M + G P + Y+ALI G C +G+ EA + M+E
Sbjct: 651 KSHRVEEARKLLDAMSME-------GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH 703
Query: 181 GLPPDAVSYSTVI-SWFHRNRE 201
G P +YS++I +F R+
Sbjct: 704 GFPATLYTYSSLIDRYFKVKRQ 725
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
E +PD Y+ LI GL + EA+D M + LP+ TYS L+ C + +
Sbjct: 296 ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGR 355
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
+ + M+ + G P +N+L+H YC G A +L+ M + G P V
Sbjct: 356 CKRVLNMMMME-------GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV 408
Query: 188 SYSTVI 193
Y+ +I
Sbjct: 409 VYNILI 414
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 103/253 (40%), Gaps = 17/253 (6%)
Query: 3 FTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXX 62
++S I F + D ASKV +M+++ P V Y +
Sbjct: 712 YSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMME 771
Query: 63 XXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLT 122
+G P+ Y+A+I G G++ L+L M GV P+ TY +L+D C
Sbjct: 772 E----KGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKN 827
Query: 123 GEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGL 182
G A +L +EM Q T + Y +I G F F+E++G+L + +
Sbjct: 828 GALDVAHNLLEEMKQ-------THWPTHTAGYRKVIEG--FNKEFIESLGLLDEIGQDDT 878
Query: 183 PPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDIWWLD-ENTRESLMKDL---SDVDTY 238
P Y +I + + L A L E+ +D +T SL++ L + V+T
Sbjct: 879 APFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETA 938
Query: 239 TSVMNDYFAEGSI 251
+ ++ +G I
Sbjct: 939 FQLFSEMTKKGVI 951
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G++ + S+ L G+ +A + REM+ G +PD TYS +++ + A
Sbjct: 443 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELA 502
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
F L +EM + G V TY ++ +C G +A M E+G P+ V+
Sbjct: 503 FLLFEEMKR-------GGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT 555
Query: 189 YSTVISWFHRNRELGKAYEL 208
Y+ +I + + +++ A EL
Sbjct: 556 YTALIHAYLKAKKVSYANEL 575
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 10/134 (7%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
P + Y+ LI + RL A + REM + + D +T + G++ +A L
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
+ F P V Y LI G C F EAM L M P+ V+YST
Sbjct: 293 VE----------TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYST 342
Query: 192 VISWFHRNRELGKA 205
++ ++LG+
Sbjct: 343 LLCGCLNKKQLGRC 356
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 92/182 (50%), Gaps = 18/182 (9%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREM--VRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+ PD ++ +I L + G+ S+ALDLF M R+ PD T++ +M + GE
Sbjct: 279 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIEN 338
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
+ + M+ + G P +V+YNAL+ Y G A+ +L + + G+ PD V
Sbjct: 339 CRAVFEAMVAE-------GLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVV 391
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFA 247
SY+ +++ + R+R+ GKA E+ + M + E + +++ + +D Y S N + A
Sbjct: 392 SYTCLLNSYGRSRQPGKAKEVFLMMRK-------ERRKPNVVTYNALIDAYGS--NGFLA 442
Query: 248 EG 249
E
Sbjct: 443 EA 444
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 13/137 (9%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT---CRLTGE 124
EG+ P+ Y+AL+ G AL + ++ ++G++PD +Y+ L+++ R G+
Sbjct: 349 EGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGK 408
Query: 125 FSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPP 184
+ F + + +K P VVTYNALI Y G EA+ I R M + G+ P
Sbjct: 409 AKEVFLMMRKERRK----------PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKP 458
Query: 185 DAVSYSTVISWFHRNRE 201
+ VS T+++ R+++
Sbjct: 459 NVVSVCTLLAACSRSKK 475
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 30/201 (14%)
Query: 74 NNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHD 133
N+ Y+ +I + + +A LF EM + PD TY L++ G++ A +L D
Sbjct: 143 NDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMD 202
Query: 134 EMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVI 193
+M++ ++ +P TYN LI+ G + EA+ + + M + G+ PD V+++ V+
Sbjct: 203 DMLRAAI-------APSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVL 255
Query: 194 SWFHRNRELGKA---YEL----KVEMDEKD----IWWLDE------------NTRESLMK 230
S + R+ KA +EL KV D I+ L + + RE +
Sbjct: 256 SAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAE 315
Query: 231 DLSDVDTYTSVMNDYFAEGSI 251
DV T+TS+M+ Y +G I
Sbjct: 316 CRPDVVTFTSIMHLYSVKGEI 336
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 13/201 (6%)
Query: 18 KASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGY 77
+A +++ QM G+ P V + TL GI + Y
Sbjct: 443 EAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS----RGINLNTAAY 498
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMD-TCRLTGEFSKAFHLHDEMI 136
++ I L +A+ L++ M + V D T+++L+ +CR++ ++ +A EM
Sbjct: 499 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMS-KYPEAISYLKEM- 556
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
D + V Y++++ Y G+ EA I M G PD ++Y++++ +
Sbjct: 557 ----EDLSIPLTKEV--YSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAY 610
Query: 197 HRNRELGKAYELKVEMDEKDI 217
+ + + GKA EL +EM+ I
Sbjct: 611 NASEKWGKACELFLEMEANGI 631
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 74/146 (50%), Gaps = 7/146 (4%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
P+ + L+ GLY++GR S+A +F +M G+ P+ TY++L+ G A L
Sbjct: 196 PNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKL 255
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
EM +G P V +NAL+ G+C LGR VEA +LR + G YS+
Sbjct: 256 FYEMQ-------TSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSS 308
Query: 192 VISWFHRNRELGKAYELKVEMDEKDI 217
+I R R +A+EL M +K+I
Sbjct: 309 LIDGLFRARRYTQAFELYANMLKKNI 334
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 32/169 (18%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA-FH 130
PD ++ LI + + G + EA ++F E+ +SG P T++ L+D +GE +A
Sbjct: 406 PDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLL 465
Query: 131 LH----------------------DEMIQ--------KSLTDFV-TGFSPFVVTYNALIH 159
LH D M++ + L F TG SP +V+YN LI+
Sbjct: 466 LHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLIN 525
Query: 160 GYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYEL 208
G+C G A+ +L + GL PD+V+Y+T+I+ HR +A++L
Sbjct: 526 GFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKL 574
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD+ ++AL+ G + GR+ EA +L R + G + YS L+D +++A
Sbjct: 263 GNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQA 322
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
F L+ M++K++ P ++ Y LI G G+ +A+ +L M G+ PD
Sbjct: 323 FELYANMLKKNI-------KPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYC 375
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKD 216
Y+ VI L + L++EM E +
Sbjct: 376 YNAVIKALCGRGLLEEGRSLQLEMSETE 403
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 7/147 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G + GYS+LI GL++ R ++A +L+ M++ + PD Y++L+ G+
Sbjct: 297 DGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIED 356
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L M K G SP YNA+I C G E + M+E PDA
Sbjct: 357 ALKLLSSMPSK-------GISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDAC 409
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDE 214
+++ +I RN + +A E+ E+++
Sbjct: 410 THTILICSMCRNGLVREAEEIFTEIEK 436
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 23/182 (12%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSK 127
G LP +A + L QGR+ AL +REM R + P+ YT +++M CR +G+ K
Sbjct: 198 GFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCR-SGKLDK 256
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
L +M + GF V+YN LI G+C G A+ + M + GL P+ V
Sbjct: 257 GIELLQDMER-------LGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVV 309
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFA 247
+++T+I F R +L +A ++ EM ++ + TY +++N Y
Sbjct: 310 TFNTLIHGFCRAMKLQEASKVFGEMKAVNVA--------------PNTVTYNTLINGYSQ 355
Query: 248 EG 249
+G
Sbjct: 356 QG 357
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 81/195 (41%), Gaps = 13/195 (6%)
Query: 1 MAFTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXX 60
+ F + I +K +ASKV+ +M V P TY TL
Sbjct: 309 VTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYED 368
Query: 61 XXXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYS-LLMDTC 119
GI D Y+ALI GL +Q + +A +E+ + ++P+ T+S L+M C
Sbjct: 369 MVC----NGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQC 424
Query: 120 RLTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAE 179
+ + F L+ MI+ +G P T+N L+ +C F A +LR M
Sbjct: 425 -VRKNADRGFELYKSMIR-------SGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVR 476
Query: 180 MGLPPDAVSYSTVIS 194
+P D+ + V +
Sbjct: 477 RSIPLDSRTVHQVCN 491
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 81/200 (40%), Gaps = 13/200 (6%)
Query: 19 ASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYS 78
A K+ M SG+ P V T+ TL + P+ Y+
Sbjct: 292 ALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAV----NVAPNTVTYN 347
Query: 79 ALILGLYQQGRLSEALDLFREMVRSGVLPDEYTY-SLLMDTCRLTGEFSKAFHLHDEMIQ 137
LI G QQG A + +MV +G+ D TY +L+ C+ + KA E+ +
Sbjct: 348 TLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCK-QAKTRKAAQFVKELDK 406
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFH 197
++L P T++ALI G C + + M G P+ +++ ++S F
Sbjct: 407 ENLV-------PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFC 459
Query: 198 RNRELGKAYELKVEMDEKDI 217
RN + A ++ EM + I
Sbjct: 460 RNEDFDGASQVLREMVRRSI 479
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 9/142 (6%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSKAFHLHDEM 135
Y+ LI G ++G LS AL L M +SG+ P+ T++ L+ CR + +A + EM
Sbjct: 276 YNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAM-KLQEASKVFGEM 334
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISW 195
+P VTYN LI+GY G A M G+ D ++Y+ +I
Sbjct: 335 K-------AVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFG 387
Query: 196 FHRNRELGKAYELKVEMDEKDI 217
+ + KA + E+D++++
Sbjct: 388 LCKQAKTRKAAQFVKELDKENL 409
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 23/182 (12%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSK 127
G LP +A + L QGR+ AL +REM R + P+ YT +++M CR +G+ K
Sbjct: 198 GFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCR-SGKLDK 256
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
L +M + GF V+YN LI G+C G A+ + M + GL P+ V
Sbjct: 257 GIELLQDMER-------LGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVV 309
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFA 247
+++T+I F R +L +A ++ EM ++ + TY +++N Y
Sbjct: 310 TFNTLIHGFCRAMKLQEASKVFGEMKAVNVA--------------PNTVTYNTLINGYSQ 355
Query: 248 EG 249
+G
Sbjct: 356 QG 357
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 81/195 (41%), Gaps = 13/195 (6%)
Query: 1 MAFTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXX 60
+ F + I +K +ASKV+ +M V P TY TL
Sbjct: 309 VTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYED 368
Query: 61 XXXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYS-LLMDTC 119
GI D Y+ALI GL +Q + +A +E+ + ++P+ T+S L+M C
Sbjct: 369 MVC----NGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQC 424
Query: 120 RLTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAE 179
+ + F L+ MI+ +G P T+N L+ +C F A +LR M
Sbjct: 425 -VRKNADRGFELYKSMIR-------SGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVR 476
Query: 180 MGLPPDAVSYSTVIS 194
+P D+ + V +
Sbjct: 477 RSIPLDSRTVHQVCN 491
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 81/200 (40%), Gaps = 13/200 (6%)
Query: 19 ASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYS 78
A K+ M SG+ P V T+ TL + P+ Y+
Sbjct: 292 ALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAV----NVAPNTVTYN 347
Query: 79 ALILGLYQQGRLSEALDLFREMVRSGVLPDEYTY-SLLMDTCRLTGEFSKAFHLHDEMIQ 137
LI G QQG A + +MV +G+ D TY +L+ C+ + KA E+ +
Sbjct: 348 TLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCK-QAKTRKAAQFVKELDK 406
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFH 197
++L P T++ALI G C + + M G P+ +++ ++S F
Sbjct: 407 ENLV-------PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFC 459
Query: 198 RNRELGKAYELKVEMDEKDI 217
RN + A ++ EM + I
Sbjct: 460 RNEDFDGASQVLREMVRRSI 479
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 9/142 (6%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSKAFHLHDEM 135
Y+ LI G ++G LS AL L M +SG+ P+ T++ L+ CR + +A + EM
Sbjct: 276 YNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAM-KLQEASKVFGEM 334
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISW 195
+P VTYN LI+GY G A M G+ D ++Y+ +I
Sbjct: 335 K-------AVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFG 387
Query: 196 FHRNRELGKAYELKVEMDEKDI 217
+ + KA + E+D++++
Sbjct: 388 LCKQAKTRKAAQFVKELDKENL 409
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 77/144 (53%), Gaps = 7/144 (4%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
PD Y+ L+ G + G +SEA +F+EM +G+ P+ YTYS+++D G+ S+A +
Sbjct: 253 PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDV 312
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
+M+ +G +P +T+N L+ + GR + + + M ++G PD ++Y+
Sbjct: 313 FADMLD-------SGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNF 365
Query: 192 VISWFHRNRELGKAYELKVEMDEK 215
+I R+ L A ++ M +K
Sbjct: 366 LIEAHCRDENLENAVKVLNTMIKK 389
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
GI P+ YS +I L + G++S A D+F +M+ SG P+ T++ LM G K
Sbjct: 285 GIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKV 344
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
++++M K L G P +TYN LI +C A+ +L M + +A +
Sbjct: 345 LQVYNQM--KKL-----GCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNAST 397
Query: 189 YSTVISWFHRNRELGKAYELKVEMDE 214
++T+ + + R++ A+ + +M E
Sbjct: 398 FNTIFRYIEKKRDVNGAHRMYSKMME 423
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 8/136 (5%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
++ LI + G SEA+ F M G +PD+ +S+++ S+A D
Sbjct: 189 FTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFD--- 245
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
SL D F P V+ Y L+ G+C G EA + + M G+ P+ +YS VI
Sbjct: 246 --SLKD---RFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDAL 300
Query: 197 HRNRELGKAYELKVEM 212
R ++ +A+++ +M
Sbjct: 301 CRCGQISRAHDVFADM 316
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFH 130
LPD YS L+ GL + GR +EA +LF EM+ + PD Y++ + G+ S AF
Sbjct: 521 LPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFR 580
Query: 131 LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYS 190
+ +M +K G + TYN+LI G + E G++ M E G+ P+ +Y+
Sbjct: 581 VLKDMEKK-------GCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYN 633
Query: 191 TVISWFHRNRELGKAYELKVEMDEKDI 217
T I + ++ A L EM +K+I
Sbjct: 634 TAIQYLCEGEKVEDATNLLDEMMQKNI 660
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 16/161 (9%)
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFH 130
LP+ + L+ L++ GR+SEA +L R+M G D T ++++D +GE KA
Sbjct: 428 LPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIE 487
Query: 131 L------HDEMIQKSLTDFVTGFS----------PFVVTYNALIHGYCFLGRFVEAMGIL 174
+ H +L + G P ++TY+ L++G C GRF EA +
Sbjct: 488 IVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLF 547
Query: 175 RGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEK 215
M L PD+V+Y+ I F + ++ A+ + +M++K
Sbjct: 548 AEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKK 588
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 9/140 (6%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMD-TCRLTGEFSKAFHLHDEM 135
Y+ + GL + G+ EA + ++M G+ P Y+Y++LMD C+L G S A + M
Sbjct: 329 YNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKL-GMLSDAKTIVGLM 387
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISW 195
+ G P VTY L+HGYC +G+ A +L+ M P+A + + ++
Sbjct: 388 KR-------NGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHS 440
Query: 196 FHRNRELGKAYELKVEMDEK 215
+ + +A EL +M+EK
Sbjct: 441 LWKMGRISEAEELLRKMNEK 460
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 21/176 (11%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ L+ ++ R+ L+++MV G+ P YT++LL+ + A L DEM
Sbjct: 115 YNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMP 174
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+K G P T+ L+ GYC G + + +L M G+ P+ V Y+T++S F
Sbjct: 175 EK-------GCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSF 227
Query: 197 HRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEGSIL 252
R E D + E RE + + D+ T+ S ++ EG +L
Sbjct: 228 CR------------EGRNDDSEKMVEKMREEGL--VPDIVTFNSRISALCKEGKVL 269
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 9/148 (6%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
GI P ++ LI L + A +LF EM G P+E+T+ +L+ G K
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L + M F G P V YN ++ +C GR ++ ++ M E GL PD V+
Sbjct: 202 LELLNAM-----ESF--GVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVT 254
Query: 189 YSTVISWFHRNRELGKAYEL--KVEMDE 214
+++ IS + ++ A + +E+DE
Sbjct: 255 FNSRISALCKEGKVLDASRIFSDMELDE 282
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 101/244 (41%), Gaps = 43/244 (17%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
DK + +M D+G P V +Y TL G+ P
Sbjct: 476 DKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMED----RGVSPKVRI 531
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ LI G +G++ +A +EM++ G+ + TY+ L+D +TG+ S+A L E+
Sbjct: 532 YNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEIS 591
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGM------------------- 177
+K G P V TYN+LI GY F G + + M
Sbjct: 592 RK-------GLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLC 644
Query: 178 ------------AEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTR 225
EM L PD + Y+ V+ + + ++ KA+ L+ +M EK I LD+ T
Sbjct: 645 TKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSI-GLDKTTY 703
Query: 226 ESLM 229
SL+
Sbjct: 704 NSLI 707
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 80/180 (44%), Gaps = 11/180 (6%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
+ A K +M GV+P+V+TY L G +P+
Sbjct: 441 ENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMED----NGTMPNVVS 496
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y LI L + +L EA + R+M GV P Y++L+D C G+ AF EM+
Sbjct: 497 YGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEML 556
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+K G +VTYN LI G G+ EA +L ++ GL PD +Y+++IS +
Sbjct: 557 KK-------GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGY 609
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 78/179 (43%), Gaps = 38/179 (21%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTC-------- 119
+G+ PD Y++LI G G + + L+ EM RSG+ P TY LL+ C
Sbjct: 593 KGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELT 652
Query: 120 -RLTGEFS----------------------KAFHLHDEMIQKSLTDFVTGFSPFVVTYNA 156
RL GE S KAF+L +MI+KS+ G TYN+
Sbjct: 653 ERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSI-----GLDK--TTYNS 705
Query: 157 LIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEK 215
LI G +G+ E ++ M + P+A +Y+ ++ ++ AY EM EK
Sbjct: 706 LILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEK 764
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 14/199 (7%)
Query: 16 PDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNN 75
P+K+ KV +M + P++ T+ TL G +PD
Sbjct: 265 PEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDL----GFVPDAF 320
Query: 76 GYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEM 135
+S L G + AL ++ V SGV + YT S+L++ G+ KA +E+
Sbjct: 321 TFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKA----EEI 376
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISW 195
+ + + G P V YN +I GYC G V A + M + G+ PD ++Y+ +I
Sbjct: 377 LGR---EMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRR 433
Query: 196 FHRNRELGKAYELKVEMDE 214
F ELG+ + E+++
Sbjct: 434 FC---ELGEMENAEKEVNK 449
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFS 126
+G++P+ Y+ +I G ++G L A M + G+ PD Y+ L+ C L GE
Sbjct: 383 KGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCEL-GEME 441
Query: 127 KAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
A ++M K G SP V TYN LI GY F + IL+ M + G P+
Sbjct: 442 NAEKEVNKMKLK-------GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNV 494
Query: 187 VSYSTVISWFHRNRELGKAYELKVEMDEKDI 217
VSY T+I+ + +L +A +K +M+++ +
Sbjct: 495 VSYGTLINCLCKGSKLLEAQIVKRDMEDRGV 525
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 21/184 (11%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ P Y+ LI G ++ + D+ +EM +G +P+ +Y L++ C G SK
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLIN-CLCKG--SK 509
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
L +++++ + D G SP V YN LI G C G+ +A + M + G+ + V
Sbjct: 510 L--LEAQIVKRDMED--RGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLV 565
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFA 247
+Y+T+I +L +A +L +E+ K + DV TY S+++ Y
Sbjct: 566 TYNTLIDGLSMTGKLSEAEDLLLEISRKGLK--------------PDVFTYNSLISGYGF 611
Query: 248 EGSI 251
G++
Sbjct: 612 AGNV 615
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ LI GL + R+++A LF EM+ +LP TY+ L+D G K+F + + M
Sbjct: 217 YNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMK 276
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+ P ++T+N L+ G G +A +L+ M ++G PDA ++S + +
Sbjct: 277 ADHI-------EPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGY 329
Query: 197 HRNRE 201
N +
Sbjct: 330 SSNEK 334
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 7/127 (5%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
P Y I + + + L+LF M + P + Y++L+D + A L
Sbjct: 177 PSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQL 236
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
DEM+ + L P ++TYN LI GYC G ++ + M + P ++++T
Sbjct: 237 FDEMLARRLL-------PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNT 289
Query: 192 VISWFHR 198
++ +
Sbjct: 290 LLKGLFK 296
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 88/184 (47%), Gaps = 21/184 (11%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G P +A++ + + G +EM++ + PD T+++L++ G F K+
Sbjct: 193 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 252
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+L +M +KS G++P +VTYN ++H YC GRF A+ +L M G+ D +
Sbjct: 253 SYLMQKM-EKS------GYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCT 305
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAE 248
Y+ +I R+ + K Y L +M ++ I + TY +++N + E
Sbjct: 306 YNMLIHDLCRSNRIAKGYLLLRDMRKRMIH--------------PNEVTYNTLINGFSNE 351
Query: 249 GSIL 252
G +L
Sbjct: 352 GKVL 355
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 25/231 (10%)
Query: 19 ASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYS 78
A ++ C++ G++P Y TL EG D+ ++
Sbjct: 497 AKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMIL----EGHTRDHFTFN 552
Query: 79 ALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQK 138
L+ L + G+++EA + R M G+LP+ ++ L++ +GE KAF + DEM +
Sbjct: 553 VLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK- 611
Query: 139 SLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHR 198
G P TY +L+ G C G EA L+ + + D V Y+T+++ +
Sbjct: 612 ------VGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCK 665
Query: 199 NRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEG 249
+ L KA L EM ++ I L D TYTS+++ +G
Sbjct: 666 SGNLAKAVSLFGEMVQRSI--------------LPDSYTYTSLISGLCRKG 702
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 28/153 (18%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEF--S 126
G+ P++ ++ALI G +G EAL +F M G+ P E +Y +L+D EF +
Sbjct: 368 GLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLA 427
Query: 127 KAFHLH-----------------DEMIQKSLTDFVT---------GFSPFVVTYNALIHG 160
+ F++ D + + D G P +VTY+ALI+G
Sbjct: 428 RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 487
Query: 161 YCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVI 193
+C +GRF A I+ + +GL P+ + YST+I
Sbjct: 488 FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 520
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 107/256 (41%), Gaps = 36/256 (14%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
+K+S + +M SG PT+ TY T+ +G+ D
Sbjct: 250 EKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS----KGVDADVCT 305
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ LI L + R+++ L R+M + + P+E TY+ L++ G+ A L +EM+
Sbjct: 306 YNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEML 365
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
G SP VT+NALI G+ G F EA+ + M GL P VSY ++
Sbjct: 366 S-------FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGL 418
Query: 197 HRNRELGKAYELKVEMDEKDIW-----------------WLDENTRESLMKDLS------ 233
+N E A + M + +LDE L+ ++S
Sbjct: 419 CKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV--VLLNEMSKDGIDP 476
Query: 234 DVDTYTSVMNDYFAEG 249
D+ TY++++N + G
Sbjct: 477 DIVTYSALINGFCKVG 492
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI PD YSALI G + GR A ++ + R G+ P+ YS L+ C G +
Sbjct: 472 DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKE 531
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A +++ MI + G + T+N L+ C G+ EA +R M G+ P+ V
Sbjct: 532 AIRIYEAMI-------LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 584
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDE 214
S+ +I+ + + E KA+ + EM +
Sbjct: 585 SFDCLINGYGNSGEGLKAFSVFDEMTK 611
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 87/188 (46%), Gaps = 12/188 (6%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI P++ Y LI GL + G + A + EM+ + P S ++ G+ +
Sbjct: 928 QGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADE 987
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L M++ L P + ++ L+H C G +EA+ + M+ GL D V
Sbjct: 988 ATLLLRFMLKMKLV-------PTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLV 1040
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTS----VMN 243
SY+ +I+ ++ A+EL EM + D + + T ++L++ L +T S ++
Sbjct: 1041 SYNVLITGLCAKGDMALAFELYEEM-KGDGFLANATTYKALIRGLLARETAFSGADIILK 1099
Query: 244 DYFAEGSI 251
D A G I
Sbjct: 1100 DLLARGFI 1107
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 9/162 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
GILPD +L+LG+ + L L + + + GV D YT+++L+ C GE +
Sbjct: 823 NGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINW 882
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
AF L M G S T +A++ RF E+ +L M++ G+ P++
Sbjct: 883 AFDLVKVMTS-------LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESR 935
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLM 229
Y +I+ R ++ A+ +K EM I N ES M
Sbjct: 936 KYIGLINGLCRVGDIKTAFVVKEEMIAHKIC--PPNVAESAM 975
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREM-VRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
ILPD+ Y++LI GL ++G+ A+ +E R VLP++ Y+ +D G++
Sbjct: 684 ILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAG 743
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+ ++M G +P +VT NA+I GY +G+ + +L M P+ +
Sbjct: 744 IYFREQMDN-------LGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTT 796
Query: 189 YSTVISWFHRNRELGKAYEL 208
Y+ ++ + + +++ ++ L
Sbjct: 797 YNILLHGYSKRKDVSTSFLL 816
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 14 LKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPD 73
++PD + +M D G+ P V +Y L G+ P
Sbjct: 428 MQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKV---GLKPS 484
Query: 74 NNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHD 133
++ Y+ALI G +A F EM + G+ P TY+ ++D R +G+ K +
Sbjct: 485 SHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWK 544
Query: 134 EMIQKSLT-----------------------DFVTGFS-----PFVVTYNALIHGYCFLG 165
M+++ + D V+ FS P V+TYN L++ Y G
Sbjct: 545 LMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGG 604
Query: 166 RFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAY 206
+ + +L+ MA + L PD+++YST+I F R R+ +A+
Sbjct: 605 QDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAF 645
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 7/136 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ + + L+ +G EAL + EM + G+ + Y+ LMD + +
Sbjct: 338 KGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEE 397
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
L EM K G P TYN L+ Y + +LR M ++GL P+
Sbjct: 398 VEGLFTEMRDK-------GLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVK 450
Query: 188 SYSTVISWFHRNRELG 203
SY+ +IS + R +++
Sbjct: 451 SYTCLISAYGRTKKMS 466
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 71/173 (41%), Gaps = 11/173 (6%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
+KA + +M G+ P+V+TY ++ E I
Sbjct: 502 EKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLR----EKIKGTRIT 557
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ L+ G +QG EA D+ E + G+ P TY++LM+ G+ +K L EM
Sbjct: 558 YNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMA 617
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
+L P +TY+ +I+ + + F A + M + G PD SY
Sbjct: 618 ALNL-------KPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSY 663
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 84/194 (43%), Gaps = 11/194 (5%)
Query: 19 ASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYS 78
AS++ ++D G P V T+ TL GI PD YS
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQ----RGIEPDLIAYS 325
Query: 79 ALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQK 138
LI G ++ G L LF + + GV D +S +D +G+ + A ++ M+ +
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 139 SLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHR 198
G SP VVTY LI G C GR EA G+ + + G+ P V+YS++I F +
Sbjct: 386 -------GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 199 NRELGKAYELKVEM 212
L + L +M
Sbjct: 439 CGNLRSGFALYEDM 452
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 11/175 (6%)
Query: 19 ASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYS 78
AS VY +M+ G++P V TY L G+ P YS
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK----RGMEPSIVTYS 430
Query: 79 ALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQK 138
+LI G + G L L+ +M++ G PD Y +L+D G A +M+ +
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ 490
Query: 139 SLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVI 193
S+ VV +N+LI G+C L RF EA+ + R M G+ PD +++TV+
Sbjct: 491 SI-------RLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ D +S+ I + G L+ A +++ M+ G+ P+ TY++L+ G +
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
AF ++ +++++ G P +VTY++LI G+C G + M +MG PPD V
Sbjct: 410 AFGMYGQILKR-------GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 188 SYSTVISWFHRNRELGKAYELKVEM 212
Y ++ + + A V+M
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKM 487
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 83/199 (41%), Gaps = 11/199 (5%)
Query: 7 IGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXX 66
I L+F + + ASK + +I+ + P + TY T+
Sbjct: 579 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPF 638
Query: 67 XEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFS 126
P+ + LI L + + A+ +F M G P+ TY LMD + +
Sbjct: 639 G----PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIE 694
Query: 127 KAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
+F L +EM +K G SP +V+Y+ +I G C GR EA I + L PD
Sbjct: 695 GSFKLFEEMQEK-------GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDV 747
Query: 187 VSYSTVISWFHRNRELGKA 205
V+Y+ +I + + L +A
Sbjct: 748 VAYAILIRGYCKVGRLVEA 766
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 13/137 (9%)
Query: 84 LYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMD---TCRLTGEFSKAFHLHDEMIQKSL 140
L++ R+ +A F ++ + PD TY+ ++ + R E + F L
Sbjct: 582 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK------- 634
Query: 141 TDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNR 200
VT F P VT LIH C A+ + MAE G P+AV+Y ++ WF ++
Sbjct: 635 ---VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSV 691
Query: 201 ELGKAYELKVEMDEKDI 217
++ +++L EM EK I
Sbjct: 692 DIEGSFKLFEEMQEKGI 708
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 7/141 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
EG+ PD Y+ LI GL + GR+ EA + MV +G PD TY+ LM+ GE
Sbjct: 294 EGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLG 353
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L +EM + G +P TYN L+HG C + M + M G+ ++
Sbjct: 354 ALSLLEEMEAR-------GCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESN 406
Query: 188 SYSTVISWFHRNRELGKAYEL 208
Y+T++ ++ ++ +AYE+
Sbjct: 407 GYATLVRSLVKSGKVAEAYEV 427
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 85/213 (39%), Gaps = 43/213 (20%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+ PD + L + GR+ EA DL +E+ PD YTY+ L+ +
Sbjct: 154 GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVV 213
Query: 129 FHLHDEM-----IQKSLTDFV------------------------TGFSPFVVTYNALIH 159
+ DEM ++ L F GF P YN ++
Sbjct: 214 YEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMK 273
Query: 160 GYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDIWW 219
G+C L + EA+G+ + M E G+ PD ++Y+T+I + G+ E ++ +
Sbjct: 274 GFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSK---AGRVEEARMYLK----TM 326
Query: 220 LDENTRESLMKDLSDVDTYTSVMNDYFAEGSIL 252
+D D TYTS+MN +G L
Sbjct: 327 VDAGYE-------PDTATYTSLMNGMCRKGESL 352
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF 129
+ PD ++ LI + L EA+ L ++ +G PD + Y+ +M + S+A
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
++ +M ++ G P +TYN LI G GR EA L+ M + G PD +Y
Sbjct: 286 GVYKKMKEE-------GVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATY 338
Query: 190 STVISWFHRNRELGKAYELKVEMDEK 215
+++++ R E A L EM+ +
Sbjct: 339 TSLMNGMCRKGESLGALSLLEEMEAR 364
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 7/148 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI + +S +I GL ++G+L+E +F M+R G P+ Y++L+D +G
Sbjct: 321 KGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVED 380
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L MI + GF P VVTY+ +++G C GR EA+ GL +++
Sbjct: 381 AIRLLHRMIDE-------GFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSM 433
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEK 215
YS++I + + +A L EM EK
Sbjct: 434 FYSSLIDGLGKAGRVDEAERLFEEMSEK 461
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 70/140 (50%), Gaps = 7/140 (5%)
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
+ALI + G + E L ++R+M +G+ P YTY+ LM+ G S F E +
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMN-----GLVSAMFVDSAERVF 245
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFH 197
+ + P +VTYN +I GYC G+ +AM LR M G D ++Y T+I +
Sbjct: 246 EVMES--GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACY 303
Query: 198 RNRELGKAYELKVEMDEKDI 217
+ + G L EMDEK I
Sbjct: 304 ADSDFGSCVALYQEMDEKGI 323
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 82/214 (38%), Gaps = 32/214 (14%)
Query: 22 VYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYSALI 81
V+ +M ++G+ PT+ TY L I PD Y+ +I
Sbjct: 209 VWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGR----IKPDIVTYNTMI 264
Query: 82 LGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLT 141
G + G+ +A++ R+M G D+ TY ++ C +F L+ EM +K +
Sbjct: 265 KGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQ 324
Query: 142 DFVTGFS----------------------------PFVVTYNALIHGYCFLGRFVEAMGI 173
FS P V Y LI GY G +A+ +
Sbjct: 325 VPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRL 384
Query: 174 LRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYE 207
L M + G PD V+YS V++ +N + +A +
Sbjct: 385 LHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALD 418
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 87/214 (40%), Gaps = 15/214 (7%)
Query: 2 AFTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXX 61
AF+ IG + K ++ V+ MI G P V Y L
Sbjct: 329 AFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 388
Query: 62 XXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRL 121
EG PD YS ++ GL + GR+ EALD F G+ + YS L+D
Sbjct: 389 ID----EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGK 444
Query: 122 TGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGM-AEM 180
G +A L +EM +K G + YNALI + + EA+ + + M E
Sbjct: 445 AGRVDEAERLFEEMSEK-------GCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE 497
Query: 181 GLPPDAVSYSTVISWF---HRNRELGKAYELKVE 211
G +Y+ ++S HRN E K +++ ++
Sbjct: 498 GCDQTVYTYTILLSGMFKEHRNEEALKLWDMMID 531
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 72/199 (36%), Gaps = 47/199 (23%)
Query: 25 QMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYSALILGL 84
+MID G P V TY + +G+ ++ YS+LI GL
Sbjct: 387 RMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRF----DGLAINSMFYSSLIDGL 442
Query: 85 YQQGRLSEALDLFREMVRSGVLPDEYTYSLLMD--------------------------- 117
+ GR+ EA LF EM G D Y Y+ L+D
Sbjct: 443 GKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQT 502
Query: 118 ----TCRLTGEFSK-----AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFV 168
T L+G F + A L D MI K G +P + AL G C G+
Sbjct: 503 VYTYTILLSGMFKEHRNEEALKLWDMMIDK-------GITPTAACFRALSTGLCLSGKVA 555
Query: 169 EAMGILRGMAEMGLPPDAV 187
A IL +A MG+ DA
Sbjct: 556 RACKILDELAPMGVILDAA 574
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 72 PDNN-GYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFH 130
P N Y+AL+ GL G L+++L +++ G+ P+ +TYS L++ +A
Sbjct: 173 PSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVK 232
Query: 131 LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYS 190
L DE+I V G P +V+YN L+ G+C GR +AM + R + G + VSY+
Sbjct: 233 LLDEII-------VKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYN 285
Query: 191 TVISWFHRNRELGKAYELKVEMDEKD 216
++ + +A L EMD D
Sbjct: 286 ILLRCLCCDGRWEEANSLLAEMDGGD 311
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G P+ + L+ L + RL +A+ + MV SG++PD Y+ L++ G A
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L ++M G+ VTYNAL+ G C LG +++ + + + GL P+A +
Sbjct: 161 MQLVEKMEDH-------GYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFT 213
Query: 189 YSTVISWFHRNRELGKAYEL 208
YS ++ ++ R +A +L
Sbjct: 214 YSFLLEAAYKERGTDEAVKL 233
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 6/141 (4%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y ++I L ++G A L EM R G PD +TYS L+ L G F+ A +
Sbjct: 426 YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEV----- 480
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
S+ + P V +NA+I G C + R AM + M E P+ +Y+ ++
Sbjct: 481 -LSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGI 539
Query: 197 HRNRELGKAYELKVEMDEKDI 217
EL A E+ E+ + +
Sbjct: 540 AHEDELELAKEVLDELRLRKV 560
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G P+ Y+ L+ G ++GR +A+ LFRE+ G + +Y++L+ G + +
Sbjct: 240 KGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEE 299
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMG--LPPD 185
A L EM +P VVTYN LI+ F GR +A+ +L+ M++
Sbjct: 300 ANSLLAEMDGGDR-------APSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVT 352
Query: 186 AVSYSTVISWFHR 198
A SY+ VI+ +
Sbjct: 353 ATSYNPVIARLCK 365
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 84/194 (43%), Gaps = 11/194 (5%)
Query: 19 ASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYS 78
AS++ ++D G P V T+ TL GI PD YS
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQ----RGIEPDLIAYS 325
Query: 79 ALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQK 138
LI G ++ G L LF + + GV D +S +D +G+ + A ++ M+ +
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 139 SLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHR 198
G SP VVTY LI G C GR EA G+ + + G+ P V+YS++I F +
Sbjct: 386 -------GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 199 NRELGKAYELKVEM 212
L + L +M
Sbjct: 439 CGNLRSGFALYEDM 452
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 28/205 (13%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ D +S+ I + G L+ A +++ M+ G+ P+ TY++L+ G +
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
AF ++ +++++ G P +VTY++LI G+C G + M +MG PPD V
Sbjct: 410 AFGMYGQILKR-------GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDI------------WWLDENTRESLMKDLS-- 233
Y ++ + + A V+M + I W N + +K
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 234 -------DVDTYTSVMNDYFAEGSI 251
DV T+T+VM EG +
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEGRL 547
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 84/216 (38%), Gaps = 46/216 (21%)
Query: 19 ASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYS 78
AS VY +M+ G++P V TY L G+ P YS
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK----RGMEPSIVTYS 430
Query: 79 ALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQK 138
+LI G + G L L+ +M++ G PD Y +L+D G A +M+ +
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ 490
Query: 139 SLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMA-------------------- 178
S+ VV +N+LI G+C L RF EA+ + R M
Sbjct: 491 SI-------RLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543
Query: 179 ---------------EMGLPPDAVSYSTVISWFHRN 199
+MGL PDA++Y T+I F ++
Sbjct: 544 EGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKH 579
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 83/199 (41%), Gaps = 11/199 (5%)
Query: 7 IGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXX 66
I L+F + + ASK + +I+ + P + TY T+
Sbjct: 608 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPF 667
Query: 67 XEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFS 126
P+ + LI L + + A+ +F M G P+ TY LMD + +
Sbjct: 668 G----PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIE 723
Query: 127 KAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
+F L +EM +K G SP +V+Y+ +I G C GR EA I + L PD
Sbjct: 724 GSFKLFEEMQEK-------GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDV 776
Query: 187 VSYSTVISWFHRNRELGKA 205
V+Y+ +I + + L +A
Sbjct: 777 VAYAILIRGYCKVGRLVEA 795
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 85/212 (40%), Gaps = 63/212 (29%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CR------- 120
GI PD ++ ++ +GRL EAL LF M + G+ PD Y L+D C+
Sbjct: 526 GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIG 585
Query: 121 -----------LTGEFSKA-------FHLHD-EMIQKSLTDFVTG-FSPFVVTYNALIHG 160
++ + + F H E K + + G P +VTYN +I G
Sbjct: 586 LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 645
Query: 161 YCFLGRFVEAM--------------------------------GILRG---MAEMGLPPD 185
YC L R EA G +R MAE G P+
Sbjct: 646 YCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPN 705
Query: 186 AVSYSTVISWFHRNRELGKAYELKVEMDEKDI 217
AV+Y ++ WF ++ ++ +++L EM EK I
Sbjct: 706 AVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 737
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 7/130 (5%)
Query: 86 QQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVT 145
+G L +A +LF+ GV+P+ +Y+LLM L + S A+ L +M+++ +
Sbjct: 167 HRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVV---- 222
Query: 146 GFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKA 205
P V +Y LI G+C G+ AM +L M G PD +SY+T+++ R +L +A
Sbjct: 223 ---PDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREA 279
Query: 206 YELKVEMDEK 215
Y+L M K
Sbjct: 280 YKLLCRMKLK 289
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 72/125 (57%), Gaps = 9/125 (7%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSKA 128
++PD + Y LI G ++G+++ A++L +M+ G +PD +Y+ L+++ CR T + +A
Sbjct: 221 VVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKT-QLREA 279
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+ L M K G +P +V YN +I G+C R ++A +L M G P++VS
Sbjct: 280 YKLLCRMKLK-------GCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVS 332
Query: 189 YSTVI 193
Y T+I
Sbjct: 333 YRTLI 337
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 9/131 (6%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSK 127
G++P+ Y+ L+ LS A LF +M+ V+PD +Y +L+ CR G+ +
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCR-KGQVNG 243
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L D+M+ K GF P ++Y L++ C + EA +L M G PD V
Sbjct: 244 AMELLDDMLNK-------GFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLV 296
Query: 188 SYSTVISWFHR 198
Y+T+I F R
Sbjct: 297 HYNTMILGFCR 307
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 18/170 (10%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G PD Y+ +ILG ++ R +A + +M+ +G P+ +Y L+ G F +
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDE 348
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
+EMI K GFSP N L+ G+C G+ EA ++ + + G +
Sbjct: 349 GKKYLEEMISK-------GFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSD 401
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDT 237
++ VI E EK +L++ +E + D VD
Sbjct: 402 TWEMVIPLICNEDE-----------SEKIKLFLEDAVKEEITGDTRIVDV 440
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+ P+ +ALI G + GRL +A + EM + + PD TY+LL+ G A
Sbjct: 435 GVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLA 494
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
F L+DEM+++ G P ++TY L+ G C+ GR +A +L + G+ D V
Sbjct: 495 FQLYDEMLRR-------GCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVP 547
Query: 189 YSTVISWFHRNRELGKAY 206
+ + + R + G+AY
Sbjct: 548 FLILAKKYTRLQRPGEAY 565
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 85 YQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFV 144
++ G + +AL++++EM + V D Y++++ +G A+ +M+++
Sbjct: 276 FKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKR------ 329
Query: 145 TGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGK 204
G +P V TYN LI C G+F EA + M G+ PD +SY +I + ++ +
Sbjct: 330 -GVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNR 388
Query: 205 AYE 207
A E
Sbjct: 389 ANE 391
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 28/173 (16%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G+ PD Y+ LI L ++G+ EA DL M GV PD+ +Y +++ + G+ ++
Sbjct: 329 RGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNR 388
Query: 128 AFHLH--------------------------DEMIQKSLTDFVT--GFSPFVVTYNALIH 159
A D S+ + + G P V T NALIH
Sbjct: 389 ANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIH 448
Query: 160 GYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEM 212
GY GR ++A + M + PD +Y+ ++ L A++L EM
Sbjct: 449 GYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEM 501
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 17/176 (9%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
+S+++ L QG+L AL L ++M+ SGV+P T++ L++ G KA L EM
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+ G SP V+YN LI G C + +A+ + M + G+ P+ V+ + ++
Sbjct: 184 E-------MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHAL 236
Query: 197 HRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEGSIL 252
+ +G + K + L+E S D+ T +M+ F G+++
Sbjct: 237 CQKGVIGN--------NNKKL--LEEILDSSQANAPLDIVICTILMDSCFKNGNVV 282
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 71/185 (38%), Gaps = 46/185 (24%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTY---------------- 112
G P+ Y+ LI GL + +AL LF M + G+ P+ T
Sbjct: 186 GPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNN 245
Query: 113 -----------------------SLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVTGFSP 149
++LMD+C G +A + EM QK++
Sbjct: 246 NKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNV-------PA 298
Query: 150 FVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELK 209
V YN +I G C G V A G + M + G+ PD +Y+T+IS + + +A +L
Sbjct: 299 DSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLH 358
Query: 210 VEMDE 214
M
Sbjct: 359 GTMQN 363
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+ + D+ Y+ +I GL G + A +MV+ GV PD +TY+ L+ G+F +
Sbjct: 294 KNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDE 353
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A LH M G +P ++Y +I G C G A L M + L P+ +
Sbjct: 354 ACDLHGTMQN-------GGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVL 406
Query: 188 SYSTVISWFHR 198
++ VI + R
Sbjct: 407 LWNVVIDGYGR 417
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 7/149 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+ P YS++I L +QGR+ EA + F +M+ SG+ PDE Y ++++T G +A
Sbjct: 577 GLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEA 636
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L +E+++ L P TY LI G+ +G + L M E GL P+ V
Sbjct: 637 NELVEEVVKHFL-------RPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVL 689
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDI 217
Y+ +I F + + ++ L M E DI
Sbjct: 690 YTALIGHFLKKGDFKFSFTLFGLMGENDI 718
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+ I+P+ ++ +I G GRL EA + M + G++P+ TY++LM + G+
Sbjct: 788 KSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIES 847
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L + T P V Y+ L+ G C R ++A+ ++ M + G+ P+
Sbjct: 848 AIDLFEG----------TNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKD 897
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIW 218
SY ++ +R +A ++ +M DIW
Sbjct: 898 SYEKLLQCLCYSRLTMEAVKVVKDMAALDIW 928
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G P Y+++I L+Q+ + + L + +PD TY ++++ + A
Sbjct: 507 GCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAA 566
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
F + D M + G P V Y+++I GR VEA M E G+ PD ++
Sbjct: 567 FAIIDAMEE-------LGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIA 619
Query: 189 YSTVISWFHRNRELGKAYEL------------------------KVEMDEKDIWWLDENT 224
Y +I+ + RN + +A EL K+ M EK +LD+
Sbjct: 620 YMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKML 679
Query: 225 RESLMKDLSDVDTYTSVMNDYFAEG 249
+ L +V YT+++ + +G
Sbjct: 680 EDGLS---PNVVLYTALIGHFLKKG 701
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 17/183 (9%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
GI+PD++ +++ L + R EA ++ SG P + SL++D F +A
Sbjct: 126 GIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEA 185
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILR---GMAEMGLPPD 185
FH +++ ++ G ++ L G C G EA+G+L GM M LP +
Sbjct: 186 FHCFEQVKER-------GSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVN 238
Query: 186 AVSYSTVISWFHRNRELGKAYELKVEMD--EKDIWWLDENTRESLMKDLSDVDTYTSVMN 243
Y ++ F + G A E + D E D +++D+ LMK+ + T M
Sbjct: 239 L--YKSLFYCFCKR---GCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMR 293
Query: 244 DYF 246
Y
Sbjct: 294 LYL 296
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 38/261 (14%)
Query: 15 KPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDN 74
+ DKA + + ++ SG P++ T L EG+ D
Sbjct: 423 RTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKT----EGLKLDV 478
Query: 75 NGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDE 134
Y+ L+ G + +L++ +L EM +G+ PD TY++L+ + + G +A + E
Sbjct: 479 VTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISE 538
Query: 135 MIQK-------SLTDFVTGFS---------------------PFVVTYNALIHGYCFLGR 166
+I++ + TD + GFS P VVT +AL+HGYC R
Sbjct: 539 LIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQR 598
Query: 167 FVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRE 226
+A+ + + + GL PD V Y+T+I + ++ KA EL M ++ + +E+T
Sbjct: 599 MEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGM-LPNESTHH 657
Query: 227 SLM-----KDLSDVDTYTSVM 242
+L+ K + +T+ S++
Sbjct: 658 ALVLGLEGKRFVNSETHASML 678
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 68/168 (40%), Gaps = 28/168 (16%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+LPD Y+ +I G GR +A F +++SG P T ++L+ C G S A
Sbjct: 403 GLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDA 462
Query: 129 FHLHDEMIQKSLT-DFVT---------------------------GFSPFVVTYNALIHG 160
+ M + L D VT G SP V TYN LIH
Sbjct: 463 ESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHS 522
Query: 161 YCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYEL 208
G EA I+ + G P ++++ VI F + + +A+ L
Sbjct: 523 MVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFIL 570
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSKAFH 130
P+ YS+ + + G + A +F+E+ G+LPD Y+ ++D C L G KAF
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNL-GRTDKAFQ 429
Query: 131 LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYS 190
+++ +G P + T LI G +A + R M GL D V+Y+
Sbjct: 430 YFGALLK-------SGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYN 482
Query: 191 TVISWFHRNRELGKAYELKVEMDEKDI 217
++ + + +L K +EL EM I
Sbjct: 483 NLMHGYGKTHQLNKVFELIDEMRSAGI 509
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 38/261 (14%)
Query: 15 KPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDN 74
+ DKA + + ++ SG P++ T L EG+ D
Sbjct: 423 RTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKT----EGLKLDV 478
Query: 75 NGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDE 134
Y+ L+ G + +L++ +L EM +G+ PD TY++L+ + + G +A + E
Sbjct: 479 VTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISE 538
Query: 135 MIQK-------SLTDFVTGFS---------------------PFVVTYNALIHGYCFLGR 166
+I++ + TD + GFS P VVT +AL+HGYC R
Sbjct: 539 LIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQR 598
Query: 167 FVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRE 226
+A+ + + + GL PD V Y+T+I + ++ KA EL M ++ + +E+T
Sbjct: 599 MEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGM-LPNESTHH 657
Query: 227 SLM-----KDLSDVDTYTSVM 242
+L+ K + +T+ S++
Sbjct: 658 ALVLGLEGKRFVNSETHASML 678
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 68/168 (40%), Gaps = 28/168 (16%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+LPD Y+ +I G GR +A F +++SG P T ++L+ C G S A
Sbjct: 403 GLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDA 462
Query: 129 FHLHDEMIQKSLT-DFVT---------------------------GFSPFVVTYNALIHG 160
+ M + L D VT G SP V TYN LIH
Sbjct: 463 ESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHS 522
Query: 161 YCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYEL 208
G EA I+ + G P ++++ VI F + + +A+ L
Sbjct: 523 MVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFIL 570
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSKAFH 130
P+ YS+ + + G + A +F+E+ G+LPD Y+ ++D C L G KAF
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNL-GRTDKAFQ 429
Query: 131 LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYS 190
+++ +G P + T LI G +A + R M GL D V+Y+
Sbjct: 430 YFGALLK-------SGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYN 482
Query: 191 TVISWFHRNRELGKAYELKVEMDEKDI 217
++ + + +L K +EL EM I
Sbjct: 483 NLMHGYGKTHQLNKVFELIDEMRSAGI 509
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 11/176 (6%)
Query: 19 ASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYS 78
A K++C+M+D G TP + TY + G PD YS
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA----GFEPDKVTYS 543
Query: 79 ALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQK 138
++ L G L EA +F EM + +PDE Y LL+D G KA+ + M+
Sbjct: 544 IVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH- 602
Query: 139 SLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
G P V T N+L+ + + + EA +L+ M +GL P +Y+ ++S
Sbjct: 603 ------AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 9/164 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD Y LI + G L A+D+++ M G+ PD +TYS++++ G A
Sbjct: 429 GCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAA 488
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L EM+ + G +P +VTYN ++ + + A+ + R M G PD V+
Sbjct: 489 HKLFCEMVDQ-------GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 541
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDL 232
YS V+ L +A + EM +K+ W+ + L+ DL
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKN--WIPDEPVYGLLVDL 583
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 79/193 (40%), Gaps = 15/193 (7%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
++A V+ QM ++G P TY TL G+ PD
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG----GLSPDTFT 471
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
YS +I L + G L A LF EMV G P+ TY+++MD + A L+ +M
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Query: 137 QKSLTDFVTGFSPFVVTYNALIH--GYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
GF P VTY+ ++ G+C G EA + M + PD Y ++
Sbjct: 532 N-------AGFEPDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Query: 195 WFHRNRELGKAYE 207
+ + + KA++
Sbjct: 583 LWGKAGNVEKAWQ 595
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 84 LYQQGRLSEALDLFREMVRS-GVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTD 142
L Q AL F + R G D +TY+ ++ +F L DEM++
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRD---- 393
Query: 143 FVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVI 193
G P VTYN LIH Y EAM + M E G PD V+Y T+I
Sbjct: 394 ---GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLI 441
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G D + Y+ ++ L + + L EMVR G P+ TY+ L+ + ++A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
++ ++M + G P VTY LI + G AM + + M GL PD +
Sbjct: 419 MNVFNQMQE-------AGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFT 471
Query: 189 YSTVISWFHRNRELGKAYELKVEM 212
YS +I+ + L A++L EM
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEM 495
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 11/176 (6%)
Query: 19 ASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYS 78
A K++C+M+D G TP + TY + G PD YS
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA----GFEPDKVTYS 543
Query: 79 ALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQK 138
++ L G L EA +F EM + +PDE Y LL+D G KA+ + M+
Sbjct: 544 IVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH- 602
Query: 139 SLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
G P V T N+L+ + + + EA +L+ M +GL P +Y+ ++S
Sbjct: 603 ------AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD Y LI + G L A+D+++ M G+ PD +TYS++++ G A
Sbjct: 429 GCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAA 488
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L EM+ + G +P +VTYN ++ + + A+ + R M G PD V+
Sbjct: 489 HKLFCEMVDQ-------GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 541
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDE 222
YS V+ L +A + EM +K+ W DE
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKN-WIPDE 574
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 79/193 (40%), Gaps = 15/193 (7%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
++A V+ QM ++G P TY TL G+ PD
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG----GLSPDTFT 471
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
YS +I L + G L A LF EMV G P+ TY+++MD + A L+ +M
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Query: 137 QKSLTDFVTGFSPFVVTYNALIH--GYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
GF P VTY+ ++ G+C G EA + M + PD Y ++
Sbjct: 532 N-------AGFEPDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Query: 195 WFHRNRELGKAYE 207
+ + + KA++
Sbjct: 583 LWGKAGNVEKAWQ 595
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 84 LYQQGRLSEALDLFREMVRS-GVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTD 142
L Q AL F + R G D +TY+ ++ +F L DEM++
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRD---- 393
Query: 143 FVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVI 193
G P VTYN LIH Y EAM + M E G PD V+Y T+I
Sbjct: 394 ---GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLI 441
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G D + Y+ ++ L + + L EMVR G P+ TY+ L+ + ++A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
++ ++M + G P VTY LI + G AM + + M GL PD +
Sbjct: 419 MNVFNQMQE-------AGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFT 471
Query: 189 YSTVISWFHRNRELGKAYELKVEM 212
YS +I+ + L A++L EM
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEM 495
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 11/176 (6%)
Query: 19 ASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYS 78
A K++C+M+D G TP + TY + G PD YS
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA----GFEPDKVTYS 543
Query: 79 ALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQK 138
++ L G L EA +F EM + +PDE Y LL+D G KA+ + M+
Sbjct: 544 IVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH- 602
Query: 139 SLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
G P V T N+L+ + + + EA +L+ M +GL P +Y+ ++S
Sbjct: 603 ------AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD Y LI + G L A+D+++ M G+ PD +TYS++++ G A
Sbjct: 429 GCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAA 488
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L EM+ + G +P +VTYN ++ + + A+ + R M G PD V+
Sbjct: 489 HKLFCEMVDQ-------GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 541
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDE 222
YS V+ L +A + EM +K+ W DE
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKN-WIPDE 574
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 79/193 (40%), Gaps = 15/193 (7%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
++A V+ QM ++G P TY TL G+ PD
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG----GLSPDTFT 471
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
YS +I L + G L A LF EMV G P+ TY+++MD + A L+ +M
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Query: 137 QKSLTDFVTGFSPFVVTYNALIH--GYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
GF P VTY+ ++ G+C G EA + M + PD Y ++
Sbjct: 532 N-------AGFEPDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Query: 195 WFHRNRELGKAYE 207
+ + + KA++
Sbjct: 583 LWGKAGNVEKAWQ 595
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 84 LYQQGRLSEALDLFREMVRS-GVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTD 142
L Q AL F + R G D +TY+ ++ +F L DEM++
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRD---- 393
Query: 143 FVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVI 193
G P VTYN LIH Y EAM + M E G PD V+Y T+I
Sbjct: 394 ---GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLI 441
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G D + Y+ ++ L + + L EMVR G P+ TY+ L+ + ++A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
++ ++M + G P VTY LI + G AM + + M GL PD +
Sbjct: 419 MNVFNQMQE-------AGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFT 471
Query: 189 YSTVISWFHRNRELGKAYELKVEM 212
YS +I+ + L A++L EM
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEM 495
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 11/176 (6%)
Query: 19 ASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYS 78
A +++C+M+ G TP + T+ + G PD YS
Sbjct: 483 AHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNA----GFQPDKVTYS 538
Query: 79 ALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQK 138
++ L G L EA +F EM R +PDE Y LL+D G KA+ + M+Q
Sbjct: 539 IVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQ- 597
Query: 139 SLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
G P V T N+L+ + + R EA +L+ M +GL P +Y+ ++S
Sbjct: 598 ------AGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 9/164 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD Y LI + G L A+D+++ M +G+ PD +TYS++++ G A
Sbjct: 424 GCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAA 483
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L EM+ + G +P +VT+N +I + + A+ + R M G PD V+
Sbjct: 484 HRLFCEMVGQ-------GCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVT 536
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDL 232
YS V+ L +A + EM K+ W+ + L+ DL
Sbjct: 537 YSIVMEVLGHCGFLEEAEGVFAEMQRKN--WVPDEPVYGLLVDL 578
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G D + Y+ ++ L + + E L EMVR G P+ TY+ L+ + +A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
++ ++M + G P VTY LI + G AM + + M E GL PD +
Sbjct: 414 MNVFNQMQE-------AGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFT 466
Query: 189 YSTVISWFHRNRELGKAYELKVEM 212
YS +I+ + L A+ L EM
Sbjct: 467 YSVIINCLGKAGHLPAAHRLFCEM 490
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 58/135 (42%), Gaps = 8/135 (5%)
Query: 84 LYQQGRLSEALDLFREMVRS-GVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTD 142
L Q + AL F + R G D +TY+ ++ +F + L DEM++
Sbjct: 333 LKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRD---- 388
Query: 143 FVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNREL 202
G P VTYN LIH Y EAM + M E G PD V+Y T+I + L
Sbjct: 389 ---GCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFL 445
Query: 203 GKAYELKVEMDEKDI 217
A ++ M E +
Sbjct: 446 DIAMDMYQRMQEAGL 460
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 77/192 (40%), Gaps = 15/192 (7%)
Query: 18 KASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGY 77
+A V+ QM ++G P TY TL G+ PD Y
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEA----GLSPDTFTY 467
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
S +I L + G L A LF EMV G P+ T+++++ + A L+ +M
Sbjct: 468 SVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQN 527
Query: 138 KSLTDFVTGFSPFVVTYNALIH--GYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISW 195
GF P VTY+ ++ G+C G EA G+ M PD Y ++
Sbjct: 528 -------AGFQPDKVTYSIVMEVLGHC--GFLEEAEGVFAEMQRKNWVPDEPVYGLLVDL 578
Query: 196 FHRNRELGKAYE 207
+ + + KA++
Sbjct: 579 WGKAGNVDKAWQ 590
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+ PD+ ++ LI G + + EA +F++M PD TY+ ++D G+ A
Sbjct: 204 GVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIA 263
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
++ M++K+ T P VV+Y L+ GYC EA+ + M GL P+AV+
Sbjct: 264 HNVLSGMLKKA-----TDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVT 318
Query: 189 YSTVI---SWFHRNREL 202
Y+T+I S HR E+
Sbjct: 319 YNTLIKGLSEAHRYDEI 335
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 29/185 (15%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRS-GVLPDEYTYSLLMDTCRLTGEFSK 127
GI P +++L+ L ++GR A DLF EM R+ GV PD YT++ L++ +
Sbjct: 168 GISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDE 227
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMG--LPPD 185
AF + +M + +P VVTYN +I G C G+ A +L GM + + P+
Sbjct: 228 AFRIFKDME-------LYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPN 280
Query: 186 AVSYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTR---------ESLMKDLSDVD 236
VSY+T++ + Y +K E+DE + + D +R +L+K LS+
Sbjct: 281 VVSYTTLV----------RGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAH 330
Query: 237 TYTSV 241
Y +
Sbjct: 331 RYDEI 335
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 9/148 (6%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
P+ Y+ L+ G + + EA+ +F +M+ G+ P+ TY+ L+ S+A H
Sbjct: 279 PNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKG------LSEA-HR 331
Query: 132 HDEM--IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
+DE+ I D T F+P T+N LI +C G AM + + M M L PD+ SY
Sbjct: 332 YDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASY 391
Query: 190 STVISWFHRNRELGKAYELKVEMDEKDI 217
S +I E +A L E+ EK++
Sbjct: 392 SVLIRTLCMRNEFDRAETLFNELFEKEV 419
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 3/200 (1%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
D+A V+ M+ G+ P TY TL PD
Sbjct: 298 DEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTT--FAPDACT 355
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
++ LI G L A+ +F+EM+ + PD +YS+L+ T + EF +A L +E+
Sbjct: 356 FNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELF 415
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+K + P YN + C G+ +A + R + + G+ D SY T+I+
Sbjct: 416 EKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV-QDPPSYKTLITGH 474
Query: 197 HRNRELGKAYELKVEMDEKD 216
R + AYEL V M ++
Sbjct: 475 CREGKFKPAYELLVLMLRRE 494
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 6/132 (4%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
+++LI G E++ LF+ M + G+ P T++ L+ G A L DEM
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+ G +P T+N LI+G+C EA I + M PD V+Y+T+I
Sbjct: 201 R------TYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGL 254
Query: 197 HRNRELGKAYEL 208
R ++ A+ +
Sbjct: 255 CRAGKVKIAHNV 266
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 92/217 (42%), Gaps = 11/217 (5%)
Query: 1 MAFTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXX 60
+ +TS I F+ + + K+Y MI+ +P + T
Sbjct: 483 IVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEE 542
Query: 61 XXXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCR 120
+PD YS LI GL + G +E +LF M G + D Y++++D
Sbjct: 543 IKARR----FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598
Query: 121 LTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEM 180
G+ +KA+ L +EM K GF P VVTY ++I G + R EA +
Sbjct: 599 KCGKVNKAYQLLEEMKTK-------GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 651
Query: 181 GLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDI 217
+ + V YS++I F + + +AY + E+ +K +
Sbjct: 652 RIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 7/132 (5%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
YS+LI G + GR+ EA + E+++ G+ P+ YT++ L+D E ++A M
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMK 719
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+ T P VTY LI+G C + +F +A + M + G+ P +SY+T+IS
Sbjct: 720 ELKCT-------PNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGL 772
Query: 197 HRNRELGKAYEL 208
+ + +A L
Sbjct: 773 AKAGNIAEAGAL 784
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 22/182 (12%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G +P Y+ ++ L + G++ EAL +F EM + P+ TY++L+D G+
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDT 395
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
AF L D M QK+ G P V T N ++ C + EA + M PD +
Sbjct: 396 AFELRDSM-QKA------GLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI 448
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFA 247
++ ++I + + AY++ +M LD + R + + YTS++ ++F
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKM-------LDSDCRTNSI-------VYTSLIKNFFN 494
Query: 248 EG 249
G
Sbjct: 495 HG 496
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 70/148 (47%), Gaps = 7/148 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G P Y ++I GL + RL EA LF E + + YS L+D G +
Sbjct: 616 KGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDE 675
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A+ + +E++QK LT P + T+N+L+ EA+ + M E+ P+ V
Sbjct: 676 AYLILEELMQKGLT-------PNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQV 728
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEK 215
+Y +I+ + R+ KA+ EM ++
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEMQKQ 756
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+ PD Y+++I L + RL EA+++F + ++ +P Y Y+ ++ G+F +A
Sbjct: 268 GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEA 327
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+ L + K G P V+ YN ++ +G+ EA+ + M + P+ +
Sbjct: 328 YSLLERQRAK-------GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLST 379
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIW 218
Y+ +I R +L A+EL+ M + ++
Sbjct: 380 YNILIDMLCRAGKLDTAFELRDSMQKAGLF 409
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 7/141 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ P+ +++L+ L + ++EAL F+ M P++ TY +L++ +F+K
Sbjct: 686 KGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNK 745
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
AF EM ++ G P ++Y +I G G EA + G PD+
Sbjct: 746 AFVFWQEMQKQ-------GMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSA 798
Query: 188 SYSTVISWFHRNRELGKAYEL 208
Y+ +I A+ L
Sbjct: 799 CYNAMIEGLSNGNRAMDAFSL 819
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 81/210 (38%), Gaps = 15/210 (7%)
Query: 2 AFTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXX 61
A+T+ IG D ++ QM + G PTV + TL
Sbjct: 170 AYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEM 229
Query: 62 XXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRL 121
I+ Y+ I + G++ A F E+ +G+ PDE TY+ ++
Sbjct: 230 KSSSLDADIVL----YNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCK 285
Query: 122 TGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMG 181
+A + + + + P YN +I GY G+F EA +L G
Sbjct: 286 ANRLDEAVEMFEHLEKNRRV-------PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 182 LPPDAVSYSTVISWFHRNRELGKAYE-LKV 210
P ++Y+ +++ R++GK E LKV
Sbjct: 339 SIPSVIAYNCILTCL---RKMGKVDEALKV 365
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
I D Y+ L + GR+ EA +L +EM G++PD Y+ L+D L G+ A
Sbjct: 383 NIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDA 442
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L DEMI G SP ++TYN L+ G G E + I M G P+AV+
Sbjct: 443 LDLIDEMIG-------NGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVT 495
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEK 215
S +I R++ +A + +++K
Sbjct: 496 NSVIIEGLCFARKVKEAEDFFSSLEQK 522
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 6/153 (3%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSK 127
G++PD Y+ +I + L +A LF +M + G+ PD TY++L+D +L E +
Sbjct: 621 GLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHE 680
Query: 128 AFHLHDEMIQKSLTDFVTGFSPF-----VVTYNALIHGYCFLGRFVEAMGILRGMAEMGL 182
+ E+ ++ ++ + FS VV Y LI C + +A + M + GL
Sbjct: 681 TCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGL 740
Query: 183 PPDAVSYSTVISWFHRNRELGKAYELKVEMDEK 215
PD V+Y+T+IS + R + A L E+ +K
Sbjct: 741 EPDMVAYTTLISSYFRKGYIDMAVTLVTELSKK 773
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 79 ALILGLYQQGRLS-EALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
+LIL Y + + EAL+ F+E + D Y++ D G +AF L EM
Sbjct: 357 SLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKD 416
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFH 197
+ G P V+ Y LI GYC G+ V+A+ ++ M G+ PD ++Y+ ++S
Sbjct: 417 R-------GIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLA 469
Query: 198 RN 199
RN
Sbjct: 470 RN 471
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
GI+PD Y+ LI G QG++ +ALDL EM+ +G+ PD TY++L+ G +
Sbjct: 418 GIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEV 477
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+++ M + G P VT + +I G CF + EA + E P + S
Sbjct: 478 LEIYERMKAE-------GPKPNAVTNSVIIEGLCFARKVKEAEDFFSSL-EQKCPENKAS 529
Query: 189 Y 189
+
Sbjct: 530 F 530
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 95/234 (40%), Gaps = 25/234 (10%)
Query: 15 KPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDN 74
+ KA +V +M++ G+ P + TY T+ ++
Sbjct: 210 RTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVT-- 267
Query: 75 NGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDE 134
Y+ ++ G G + A ++F EM+R GVLP TY+ ++ A + +E
Sbjct: 268 --YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEE 325
Query: 135 MIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
M+++ G+ P V TYN LI G G F +++ M G P+ +Y+ +I
Sbjct: 326 MVRR-------GYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIR 378
Query: 195 WFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAE 248
++ E+ KA L +M D L ++DTY +++ F
Sbjct: 379 YYSECSEVEKALGLFEKMGSGDC--------------LPNLDTYNILISGMFVR 418
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 22/164 (13%)
Query: 88 GRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVTGF 147
G+ +A+ LF M G D +++ ++D + KA+ L + + F
Sbjct: 140 GKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR--------F 191
Query: 148 SPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYE 207
S VTYN +++G+C + R +A+ +L+ M E G+ P+ +Y+T++ F R ++ A+E
Sbjct: 192 SVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWE 251
Query: 208 LKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEGSI 251
+EM ++D DV TYT+V++ + G I
Sbjct: 252 FFLEMKKRDCEI--------------DVVTYTTVVHGFGVAGEI 281
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 71/180 (39%), Gaps = 12/180 (6%)
Query: 15 KPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDN 74
KPDKA K++ M + G + ++ T+ + +
Sbjct: 141 KPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVT--- 197
Query: 75 NGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDE 134
Y+ ++ G R +AL++ +EMV G+ P+ TY+ ++ G+ A+ E
Sbjct: 198 --YNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLE 255
Query: 135 MIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
M ++ VVTY ++HG+ G A + M G+ P +Y+ +I
Sbjct: 256 MKKRDC-------EIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQ 308
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 83/177 (46%), Gaps = 21/177 (11%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
GI D Y+ L+ + GR EALD+ REM G+ D TY+ L+ G++ +
Sbjct: 439 GIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEV 498
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+ EM ++ + P ++TY+ LI GY G + EAM I R GL D V
Sbjct: 499 KKVFTEMKREHVL-------PNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVL 551
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDY 245
YS +I +N +G A L +DE T+E + +V TY S+++ +
Sbjct: 552 YSALIDALCKNGLVGSAVSL-----------IDEMTKEGISP---NVVTYNSIIDAF 594
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 7/137 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
GI D Y+AL+ G +QG+ E +F EM R VLP+ TYS L+D G + +A
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+ E KS G VV Y+ALI C G A+ ++ M + G+ P+ V+
Sbjct: 534 MEIFREF--KS-----AGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVT 586
Query: 189 YSTVISWFHRNRELGKA 205
Y+++I F R+ + ++
Sbjct: 587 YNSIIDAFGRSATMDRS 603
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 21/181 (11%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+ PD +++L+ + G A +LF EM + D ++Y+ L+D G+ A
Sbjct: 334 GVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 393
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
F + +M K + P VV+Y+ +I G+ GRF EA+ + M +G+ D VS
Sbjct: 394 FEILAQMPVKRIM-------PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAE 248
Y+T++S + KV E+ + L E + K DV TY +++ Y +
Sbjct: 447 YNTLLSIY-----------TKVGRSEEALDILREMASVGIKK---DVVTYNALLGGYGKQ 492
Query: 249 G 249
G
Sbjct: 493 G 493
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
E +LP+ YS LI G + G EA+++FRE +G+ D YS L+D G
Sbjct: 508 EHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGS 567
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGY 161
A L DEM ++ G SP VVTYN++I +
Sbjct: 568 AVSLIDEMTKE-------GISPNVVTYNSIIDAF 594
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 22/175 (12%)
Query: 76 GYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTG-EFSKAFHLHDE 134
+SALI + G EA+ +F M G+ P+ TY+ ++D C G EF + DE
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 135 MIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
M + G P +T+N+L+ G + A + M + D SY+T++
Sbjct: 330 MQR-------NGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 195 WFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEG 249
+ ++ A+E+ +M K I + +V +Y++V++ + G
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRI--------------MPNVVSYSTVIDGFAKAG 423
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 64/133 (48%), Gaps = 7/133 (5%)
Query: 73 DNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLH 132
D Y+ L + G++ EA++LFREM G+ PD Y+ L+ C L G+ S AF L
Sbjct: 395 DRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLM 454
Query: 133 DEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTV 192
EM TG +P +V YN L G G EA L+ M G+ P V+++ V
Sbjct: 455 IEMDG-------TGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMV 507
Query: 193 ISWFHRNRELGKA 205
I EL KA
Sbjct: 508 IEGLIDAGELDKA 520
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF 129
+ PD Y+ LI + G L EA +F +M+ SGV PD Y+ L+ C G +A
Sbjct: 757 VKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAK 816
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
+ D MI+ +G P VV Y ALI G C G ++A+ +++ M E G+ P S
Sbjct: 817 MIFDRMIE-------SGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASL 869
Query: 190 STV 192
S V
Sbjct: 870 SAV 872
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMD-TCRLTGEFSKA 128
I+PD Y+ L+ ++ +L REM V PD + Y++L+D C++ G+ +A
Sbjct: 729 IVPDVVTYTVLLKNKPER-------NLSREMKAFDVKPDVFYYTVLIDWQCKI-GDLGEA 780
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+ D+MI+ +G P Y ALI C +G EA I M E G+ PD V
Sbjct: 781 KRIFDQMIE-------SGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVP 833
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDI 217
Y+ +I+ RN + KA +L EM EK I
Sbjct: 834 YTALIAGCCRNGFVLKAVKLVKEMLEKGI 862
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 7/145 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
GI PD YSA+I G + + +A+D+F +M++ + S ++ G FS+A
Sbjct: 321 GIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEA 380
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+ L E + T S V YN LG+ EA+ + R M G+ PD ++
Sbjct: 381 YDLFKEFRE-------TNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVIN 433
Query: 189 YSTVISWFHRNRELGKAYELKVEMD 213
Y+T+I + A++L +EMD
Sbjct: 434 YTTLIGGCCLQGKCSDAFDLMIEMD 458
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 7/140 (5%)
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
S+++ Q G SEA DLF+E + + D Y++ D G+ +A L EM
Sbjct: 365 SSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTG 424
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFH 197
K G +P V+ Y LI G C G+ +A ++ M G PD V Y+ +
Sbjct: 425 K-------GIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLA 477
Query: 198 RNRELGKAYELKVEMDEKDI 217
N +A+E M+ + +
Sbjct: 478 TNGLAQEAFETLKMMENRGV 497
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 81/166 (48%), Gaps = 27/166 (16%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSK 127
G+ P+ + Y LI + + +A + F +V ++PD +TY+++++T CRL E +
Sbjct: 595 GVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLN-EPKQ 653
Query: 128 AFHLHDEMIQKSLTDFVTGFS---------------------PFVVTYNALIHGYCFLGR 166
A+ L ++M ++ + V +S P VV Y +I+ YC L
Sbjct: 654 AYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLND 713
Query: 167 FVEAMGILRGMAEMGLPPDAVSYSTVI-SWFHRN--RELGKAYELK 209
+ + + M + PD V+Y+ ++ + RN RE+ KA+++K
Sbjct: 714 LKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREM-KAFDVK 758
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+ PD Y+ALI + G L EA +F M+ SGV PD Y+ L+ C G KA
Sbjct: 791 GVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKA 850
Query: 129 FHLHDEMIQKSL 140
L EM++K +
Sbjct: 851 VKLVKEMLEKGI 862
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI PD Y+ LI G QG+ S+A DL EM +G PD Y++L G +
Sbjct: 425 KGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQE 484
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHG 160
AF M + G P VT+N +I G
Sbjct: 485 AFETLKMMENR-------GVKPTYVTHNMVIEG 510
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
PD Y++LI L + G + EA F+EM G+ PD TYS LM+ T A+ L
Sbjct: 510 PDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSL 569
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
+EM+ V G P +VTYN L+ GR EA+ + M + GL PD+++Y+
Sbjct: 570 FEEML-------VKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTV 622
Query: 192 V 192
+
Sbjct: 623 L 623
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 76/145 (52%), Gaps = 7/145 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G++ D Y+ + L + ++S DLF +M + G PD +TY++L+ + GE +
Sbjct: 436 KGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDE 495
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A ++ +E+ + + P +++YN+LI+ G EA + M E GL PD V
Sbjct: 496 AINIFEELER-------SDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVV 548
Query: 188 SYSTVISWFHRNRELGKAYELKVEM 212
+YST++ F + + AY L EM
Sbjct: 549 TYSTLMECFGKTERVEMAYSLFEEM 573
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G PD Y+ LI + G + EA+++F E+ RS PD +Y+ L++ G+ +
Sbjct: 471 DGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDE 530
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A EM +K G +P VVTY+ L+ + R A + M G P+ V
Sbjct: 531 AHVRFKEMQEK-------GLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIV 583
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDI 217
+Y+ ++ +N +A +L +M ++ +
Sbjct: 584 TYNILLDCLEKNGRTAEAVDLYSKMKQQGL 613
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 73 DNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLH 132
+ + Y +++ L G+ EA+++ ++ GV+ D Y+ + G+ + H+H
Sbjct: 406 ERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSA---LGKLKQISHIH 462
Query: 133 DEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTV 192
D + +K D G SP + TYN LI + +G EA+ I + PD +SY+++
Sbjct: 463 D-LFEKMKKD---GPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSL 518
Query: 193 ISWFHRNRELGKAYELKVEMDEKDI 217
I+ +N ++ +A+ EM EK +
Sbjct: 519 INCLGKNGDVDEAHVRFKEMQEKGL 543
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 7/146 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
+ PD YS LI ++G AL ++M + V D YS L++ R ++SKA
Sbjct: 185 ALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKA 244
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+ + + +G +P +V YN++I+ Y F EA +++ M E G+ P+ VS
Sbjct: 245 ISIFSRLKR-------SGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVS 297
Query: 189 YSTVISWFHRNRELGKAYELKVEMDE 214
YST++S + N + +A + EM E
Sbjct: 298 YSTLLSVYVENHKFLEALSVFAEMKE 323
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 30/178 (16%)
Query: 69 GILPDNNGYSALILGLYQQGRL-SEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
GI PD Y+++I +Y + +L EA L +EM +GVLP+ +YS L+ +F +
Sbjct: 255 GITPDLVAYNSMI-NVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLE 313
Query: 128 AFHLHDEMIQKSLT-DFVT---------------------------GFSPFVVTYNALIH 159
A + EM + + D T P VV+YN ++
Sbjct: 314 ALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILR 373
Query: 160 GYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDI 217
Y F EA+ + R M + + V+Y+T+I + + E KA L EM + I
Sbjct: 374 VYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGI 431
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 9/148 (6%)
Query: 70 ILPDNNGYSALILGLYQQGRL-SEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
I P+ Y+ IL +Y + L EA+ LFR M R + + TY+ ++ T E KA
Sbjct: 361 IEPNVVSYNT-ILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKA 419
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+L EM + G P +TY+ +I + G+ A + + + G+ D V
Sbjct: 420 TNLVQEMQSR-------GIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVL 472
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKD 216
Y T+I + R +G A L E+ D
Sbjct: 473 YQTMIVAYERVGLMGHAKRLLHELKLPD 500
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 7/140 (5%)
Query: 76 GYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEM 135
++ L+ GL + +A+ L REM R+ ++PD ++Y+ ++ E KA L +EM
Sbjct: 144 NHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM 203
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISW 195
+G S +VT+ LI +C G+ EAMG L+ M MGL D V Y+++I
Sbjct: 204 KG-------SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256
Query: 196 FHRNRELGKAYELKVEMDEK 215
F EL + L E+ E+
Sbjct: 257 FCDCGELDRGKALFDEVLER 276
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 10/139 (7%)
Query: 80 LILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKS 139
LI + G++ EA+ +EM G+ D Y+ L+ GE + L DE++++
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER- 276
Query: 140 LTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF--- 196
G SP +TYN LI G+C LG+ EA I M E G+ P+ +Y+ +I
Sbjct: 277 ------GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330
Query: 197 HRNRELGKAYELKVEMDEK 215
+ +E + L +E DE+
Sbjct: 331 GKTKEALQLLNLMIEKDEE 349
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 10/140 (7%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTY-SLLMDTCRLTGEFSKAFHLHDEM 135
Y++LI G G L LF E++ G P TY +L+ C+L G+ +A + + M
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKL-GQLKEASEIFEFM 308
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISW 195
I++ G P V TY LI G C +G+ EA+ +L M E P+AV+Y+ +I+
Sbjct: 309 IER-------GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINK 361
Query: 196 FHRNRELGKAYELKVEMDEK 215
++ + A E+ VE+ +K
Sbjct: 362 LCKDGLVADAVEI-VELMKK 380
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 7/141 (4%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ L+ L ++G L +A LF EM R PD ++++++D G+ A L M
Sbjct: 532 YNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMS 591
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+ G SP + TY+ LI+ + LG EA+ M + G PDA +V+ +
Sbjct: 592 R-------AGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYC 644
Query: 197 HRNRELGKAYELKVEMDEKDI 217
E K EL ++ +KDI
Sbjct: 645 ISQGETDKLTELVKKLVDKDI 665
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 7/141 (4%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
PD Y+ALI GL ++ RL +ALD++ +V D T ++L+++ G+ +KA L
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
++ + TY A+I G+C G A G+L M L P Y+
Sbjct: 482 WKQISDSKIVRNSD-------TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNC 534
Query: 192 VISWFHRNRELGKAYELKVEM 212
++S + L +A+ L EM
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEM 555
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 25/233 (10%)
Query: 18 KASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGY 77
+AS+++ MI+ GV P V TY L P+ Y
Sbjct: 300 EASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEE----PNAVTY 355
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
+ +I L + G +++A+++ M + PD TY++L+ G+ +A L M++
Sbjct: 356 NIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLK 415
Query: 138 -KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
S TD P V++YNALIHG C R +A+ I + E D V+ + +++
Sbjct: 416 DSSYTD------PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNST 469
Query: 197 HRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEG 249
+ ++ KA EL ++ + I + + DTYT++++ + G
Sbjct: 470 LKAGDVNKAMELWKQISDSKI--------------VRNSDTYTAMIDGFCKTG 508
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 7/139 (5%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF 129
++PD Y+ +I G + L +AL+L EM SG T+ +L+D G+ +A
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
EM G +V Y +LI G+C G + + E G P A++Y
Sbjct: 233 GFLKEMK-------FMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285
Query: 190 STVISWFHRNRELGKAYEL 208
+T+I F + +L +A E+
Sbjct: 286 NTLIRGFCKLGQLKEASEI 304
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 37/74 (50%)
Query: 146 GFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKA 205
GF+ V +N L+ G C +A+ +LR M L PD SY+TVI F +EL KA
Sbjct: 137 GFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196
Query: 206 YELKVEMDEKDIWW 219
EL EM W
Sbjct: 197 LELANEMKGSGCSW 210
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 81 ILGLY-QQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKS 139
++ LY + GRL++A +LF EM++SGV D T++ ++ TC G S+A L +M +K
Sbjct: 311 LIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEK- 369
Query: 140 LTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRN 199
G SP TYN L+ + G A+ R + ++GL PD V++ V+ +
Sbjct: 370 ------GISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQR 423
Query: 200 RELGKAYELKVEMDEKDIWWLDENTRESLMK 230
+ + + + EMD I +DE++ +M+
Sbjct: 424 KMVAEVEAVIAEMDRNSI-RIDEHSVPVIMQ 453
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 93/235 (39%), Gaps = 26/235 (11%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
D+A ++ +M+DSG P TY + G+ P+
Sbjct: 567 DEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKT----GVKPNEVV 622
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y +LI G + G + EA+ FR M GV + + L+ G +A ++D+M
Sbjct: 623 YGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKM- 681
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
D G P V N+++ LG EA I + E G D +S++T++ +
Sbjct: 682 ----KDSEGG--PDVAASNSMLSLCADLGIVSEAESIFNALREKG-TCDVISFATMMYLY 734
Query: 197 HRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEGSI 251
L +A E+ EM E + LSD ++ VM Y A+G +
Sbjct: 735 KGMGMLDEAIEVAEEMRESGL--------------LSDCTSFNQVMACYAADGQL 775
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 9/185 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G PD Y++L L + EA + EM+ SG P TY+ ++ + G S
Sbjct: 544 QGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSD 603
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L++ M + TG P V Y +LI+G+ G EA+ R M E G+ + +
Sbjct: 604 AVDLYEAMEK-------TGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHI 656
Query: 188 SYSTVISWFHRNRELGKAYEL--KVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDY 245
+++I + + L +A + K++ E N+ SL DL V S+ N
Sbjct: 657 VLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNAL 716
Query: 246 FAEGS 250
+G+
Sbjct: 717 REKGT 721
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 80 LILGLYQQGRLSE-ALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQK 138
+++ Y + +L E AL LF+ M G PDE TY+ L +A + EM+
Sbjct: 520 VMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLD- 578
Query: 139 SLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHR 198
+G P TY A+I Y LG +A+ + M + G+ P+ V Y ++I+ F
Sbjct: 579 ------SGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAE 632
Query: 199 NRELGKAYELKVEMDEKDI 217
+ + +A + M+E +
Sbjct: 633 SGMVEEAIQYFRMMEEHGV 651
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 79/185 (42%), Gaps = 10/185 (5%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
D A K++ +M+ V PT T+ TL G+ P +
Sbjct: 169 DDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVY---GVRPTVHI 225
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y++LI L Q G LS A L E + D YS L+ + G ++ + +EM
Sbjct: 226 YASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMS 285
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+K G P VTYN LI+G+C A +L M E GL PD +SY+ ++ F
Sbjct: 286 EK-------GCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVF 338
Query: 197 HRNRE 201
R ++
Sbjct: 339 FRIKK 343
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
YS LI L + GR +E + EM G PD TY++L++ + + A + DEM+
Sbjct: 261 YSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMV 320
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTV 192
+K G P V++YN ++ + + ++ EA + M G PD +SY V
Sbjct: 321 EK-------GLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIV 369
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 66/147 (44%), Gaps = 8/147 (5%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRS-GVLPDEYTYSLLMDTCRLTGEFSKA 128
+ P + LI GL + R+ EAL + +M++ GV P + Y+ L+ GE S A
Sbjct: 183 VKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFA 242
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
F L DE + + Y+ LI GR E IL M+E G PD V+
Sbjct: 243 FKLKDEAYEGKI-------KVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVT 295
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEK 215
Y+ +I+ F + A + EM EK
Sbjct: 296 YNVLINGFCVENDSESANRVLDEMVEK 322
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 11/178 (6%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
+ AS ++ ++++ G+ P+ Y +L +G+ D
Sbjct: 671 ESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLK----DGLRCDLGT 726
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ LI GL + G L A +L+ EM G++PDE Y+++++ G+F K + +EM
Sbjct: 727 YTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMK 786
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
+ ++T P V+ YNA+I G+ G EA + M + G+ PD ++ ++S
Sbjct: 787 KNNVT-------PNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVS 837
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 71/146 (48%), Gaps = 8/146 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGV-LPDEYTYSLLMDTCRLTGEFSK 127
G PD+ YS + + L+ A L REM + +P + TY+ ++ G
Sbjct: 263 GAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDD 322
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L DEM L+D G S VV +LI G+C V A+ + M + G P++V
Sbjct: 323 AIRLKDEM----LSD---GISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSV 375
Query: 188 SYSTVISWFHRNRELGKAYELKVEMD 213
++S +I WF +N E+ KA E +M+
Sbjct: 376 TFSVLIEWFRKNGEMEKALEFYKKME 401
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 102/251 (40%), Gaps = 25/251 (9%)
Query: 1 MAFTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXX 60
M++ S I F + D A Y +M +G++P V TY +L
Sbjct: 585 MSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDE 644
Query: 61 XXXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCR 120
+G+ D Y ALI G ++ + A LF E++ G+ P + Y+ L+ R
Sbjct: 645 MKN----KGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFR 700
Query: 121 LTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEM 180
G A L+ +M++ G + TY LI G G + A + M +
Sbjct: 701 NLGNMVAALDLYKKMLKD-------GLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAV 753
Query: 181 GLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTS 240
GL PD + Y+ +++ + + K ++ EM + ++ +V Y +
Sbjct: 754 GLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVT--------------PNVLIYNA 799
Query: 241 VMNDYFAEGSI 251
V+ ++ EG++
Sbjct: 800 VIAGHYREGNL 810
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 21/176 (11%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+++I G +++G + A+ + EM +G+ P+ TY+ LM+ +A + DEM
Sbjct: 587 YNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMK 646
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
K G + Y ALI G+C A + + E GL P Y+++IS F
Sbjct: 647 NK-------GVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGF 699
Query: 197 HRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEGSIL 252
+ A +L +M L + R D+ TYT++++ +G+++
Sbjct: 700 RNLGNMVAALDLYKKM-------LKDGLR-------CDLGTYTTLIDGLLKDGNLI 741
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 91/212 (42%), Gaps = 14/212 (6%)
Query: 10 MFHWL----KPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXX 65
+ WL K D+A+++ +M G+ P V +Y +
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE-- 506
Query: 66 XXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEF 125
+G+ P+N YS LI G ++ AL++ M S + + Y +++ G+
Sbjct: 507 --KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQT 564
Query: 126 SKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPD 185
SKA L MI++ ++YN++I G+ G A+ M G+ P+
Sbjct: 565 SKARELLANMIEEK------RLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPN 618
Query: 186 AVSYSTVISWFHRNRELGKAYELKVEMDEKDI 217
++Y+++++ +N + +A E++ EM K +
Sbjct: 619 VITYTSLMNGLCKNNRMDQALEMRDEMKNKGV 650
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 26/178 (14%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
GI P+ Y+ ++LG +Q + A +F ++ G+ P+ YTYS+L+D C
Sbjct: 473 GIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGC--------- 523
Query: 129 FHLHDEMIQKSLTDFVTGFSPFV--VTYNALIHGYCFLGRFVEAMGILRGM-AEMGLPPD 185
F HDE + + +T + V V Y +I+G C +G+ +A +L M E L
Sbjct: 524 FRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVS 583
Query: 186 AVSYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMN 243
+SY+++I F + E+ A EM I +V TYTS+MN
Sbjct: 584 CMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGIS--------------PNVITYTSLMN 627
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 8/140 (5%)
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
++LI G + L AL LF +M + G P+ T+S+L++ R GE KA + +M
Sbjct: 343 TSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKM-- 400
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFH 197
V G +P V + +I G+ + EA+ + E GL + +T++SW
Sbjct: 401 -----EVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLC 454
Query: 198 RNRELGKAYELKVEMDEKDI 217
+ + +A EL +M+ + I
Sbjct: 455 KQGKTDEATELLSKMESRGI 474
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G++PD Y+ ++ GL ++G+ + + +F EM ++ V P+ Y+ ++ G +A
Sbjct: 754 GLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEA 813
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHG 160
F LHDEM+ K G P T++ L+ G
Sbjct: 814 FRLHDEMLDK-------GILPDGATFDILVSG 838
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 24/146 (16%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
++A+++G Q GR EA+ +F +M RSG+ PD YT + C + H + I
Sbjct: 339 WTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAI 398
Query: 137 QKSLTDFVTGFSPFV------------------------VTYNALIHGYCFLGRFVEAMG 172
L +VT + V V++ A++ Y GR VE +
Sbjct: 399 TSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQ 458
Query: 173 ILRGMAEMGLPPDAVSYSTVISWFHR 198
+ M + GL PD V+ + VIS R
Sbjct: 459 LFDKMVQHGLKPDGVTLTGVISACSR 484
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 12/144 (8%)
Query: 73 DNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLH 132
D ++A++ Q GR E + LF +MV+ G+ PD T + ++ C G K
Sbjct: 436 DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYF 495
Query: 133 DEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTV 192
M + G P + Y+ +I + GR EAM + GM PPDA+ ++T+
Sbjct: 496 KLMTSE------YGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP---FPPDAIGWTTL 546
Query: 193 ISWFHR--NRELGK-AYELKVEMD 213
+S N E+GK A E +E+D
Sbjct: 547 LSACRNKGNLEIGKWAAESLIELD 570
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 24/151 (15%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G+ D+ ++A+I GL Q G EA++ FREM G+ D+Y + ++ C G ++
Sbjct: 229 RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINE 288
Query: 128 AFHLHDEMIQKSLTDFVTGFSPF------------------------VVTYNALIHGYCF 163
+H +I+ + D + S VV++ A++ GY
Sbjct: 289 GKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQ 348
Query: 164 LGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
GR EA+ I M G+ PD + IS
Sbjct: 349 TGRAEEAVKIFLDMQRSGIDPDHYTLGQAIS 379
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 84/211 (39%), Gaps = 43/211 (20%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G+ PD + L + GR+ EA DL +E+ PD YTY+ L+ +
Sbjct: 153 NGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHV 212
Query: 128 AFHLHDEM-----IQKSLTDFV------------------------TGFSPFVVTYNALI 158
+ DEM ++ L F GF P YN ++
Sbjct: 213 VYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIM 272
Query: 159 HGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDIW 218
G+C L + EA+G+ + M E G+ PD ++Y+T+I + G+ E ++ +
Sbjct: 273 KGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSK---AGRVEEARMYLK----T 325
Query: 219 WLDENTRESLMKDLSDVDTYTSVMNDYFAEG 249
+D D TYTS+MN +G
Sbjct: 326 MVDAGYE-------PDTATYTSLMNGMCRKG 349
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 9/150 (6%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
EGI PD Y+ L+ +G EA +FR M G++PD TYS L++T F K
Sbjct: 241 EGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVET------FGK 294
Query: 128 AFHLHDEMIQKSLTDFVTGFS-PFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
L E + L + +G S P + +YN L+ Y G EAMG+ M G P+A
Sbjct: 295 LRRL--EKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNA 352
Query: 187 VSYSTVISWFHRNRELGKAYELKVEMDEKD 216
+YS +++ F ++ +L +EM +
Sbjct: 353 NTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 382
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 74/177 (41%), Gaps = 11/177 (6%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
D+A V+ M D G+ P + TY L G LPD
Sbjct: 264 DEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASG----GSLPDITS 319
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ L+ + G + EA+ +F +M +G P+ TYS+L++ +G + L EM
Sbjct: 320 YNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM- 378
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVI 193
+ S TD P TYN LI + G F E + + M E + PD +Y +I
Sbjct: 379 KSSNTD------PDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGII 429
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 74/176 (42%), Gaps = 22/176 (12%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTG-EFSKAFHLHDEM 135
Y+ALI + GR +L+L M + P TY+ +++ C G ++ L EM
Sbjct: 179 YTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEM 238
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISW 195
+ G P +VTYN L+ G EA + R M + G+ PD +YS ++
Sbjct: 239 RHE-------GIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVET 291
Query: 196 FHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEGSI 251
F + R L K +L EM L D+ +Y ++ Y GSI
Sbjct: 292 FGKLRRLEKVCDLLGEMASGG--------------SLPDITSYNVLLEAYAKSGSI 333
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 80/196 (40%), Gaps = 11/196 (5%)
Query: 22 VYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYSALI 81
++ +M G+ P + TY TL GI+PD YS L+
Sbjct: 234 LFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDG----GIVPDLTTYSHLV 289
Query: 82 LGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLT 141
+ RL + DL EM G LPD +Y++L++ +G +A + +M
Sbjct: 290 ETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ----- 344
Query: 142 DFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRE 201
G +P TY+ L++ + GR+ + + M PDA +Y+ +I F
Sbjct: 345 --AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 402
Query: 202 LGKAYELKVEMDEKDI 217
+ L +M E++I
Sbjct: 403 FKEVVTLFHDMVEENI 418
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 7/128 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G P+ N YS L+ Q GR + LF EM S PD TY++L++ G F +
Sbjct: 347 GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEV 406
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L +M+++++ P + TY +I G +A IL+ M + P + +
Sbjct: 407 VTLFHDMVEENI-------EPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKA 459
Query: 189 YSTVISWF 196
Y+ VI F
Sbjct: 460 YTGVIEAF 467
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 103/234 (44%), Gaps = 52/234 (22%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
GI PD Y++LI G + L+ L LF EM+ SG+ PD ++Y+ LM G +A
Sbjct: 78 GIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEA 137
Query: 129 FH-LH-------------------DEMIQKSLTD--------FVTGFSPFVVTYNALIHG 160
F LH D + + TD + P ++TYN LI+G
Sbjct: 138 FKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNILING 197
Query: 161 YCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDIWWL 220
C R ++R + + G P+AV+Y+T++ + + + + K +L ++M +K+ +
Sbjct: 198 LCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKM-KKEGYTF 256
Query: 221 DENTRESLMKDL-----------------------SDVDTYTSVMNDYFAEGSI 251
D +++ L D+ +Y +++N YF +G++
Sbjct: 257 DGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNL 310
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%)
Query: 146 GFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKA 205
G P V+TYN LI GY EA + R M E G+ PD +Y+++IS +N L +
Sbjct: 43 GVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRV 102
Query: 206 YELKVEM 212
+L EM
Sbjct: 103 LQLFDEM 109
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 21/183 (11%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
GI D + Y++LI ++G + A LF E+ G+ P YTY L+D GE A
Sbjct: 324 GIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAA 383
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L +EM K G + V +N LI GYC G EA I M + G D +
Sbjct: 384 EILMNEMQSK-------GVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFT 436
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAE 248
+T+ S F+R + +A + M E + LS V +YT++++ Y E
Sbjct: 437 CNTIASCFNRLKRYDEAKQWLFRMMEGGV-------------KLSTV-SYTNLIDVYCKE 482
Query: 249 GSI 251
G++
Sbjct: 483 GNV 485
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 65/139 (46%), Gaps = 7/139 (5%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ LI ++G + EA LF EM GV P+ TY++++ G+ +A L M
Sbjct: 472 YTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANM- 530
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
G P TY +LIHG C EAM + M GL ++V+Y+ +IS
Sbjct: 531 ------EANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGL 584
Query: 197 HRNRELGKAYELKVEMDEK 215
+ + +A+ L EM K
Sbjct: 585 SKAGKSDEAFGLYDEMKRK 603
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 9/132 (6%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMD-TCRLTGEFS 126
+G++ + Y+ L+ + G++S+A LF EM G+ D + Y+ L+ CR G
Sbjct: 288 DGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCR-KGNMK 346
Query: 127 KAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
+AF L DE+ +K G SP TY ALI G C +G A ++ M G+
Sbjct: 347 RAFLLFDELTEK-------GLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQ 399
Query: 187 VSYSTVISWFHR 198
V ++T+I + R
Sbjct: 400 VVFNTLIDGYCR 411
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 7/150 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI P+ Y+ +I +Q S + + M + GV+ ++ TY+LLM+ G+ S
Sbjct: 253 KGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSD 312
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L DEM ++ G V Y +LI C G A + + E GL P +
Sbjct: 313 AEKLFDEMRER-------GIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSY 365
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDI 217
+Y +I + E+G A L EM K +
Sbjct: 366 TYGALIDGVCKVGEMGAAEILMNEMQSKGV 395
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 21/176 (11%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ D ++ ++ R+ L++FR MV SGV Y+ +++++ GE K
Sbjct: 183 KGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEK 242
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
+ L E V G P TYN +I+ Y F G+L+ M + G+ + V
Sbjct: 243 SKKLIKEF-------SVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKV 295
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMN 243
+Y+ ++ +N ++ A +L EM E+ I SDV YTS+++
Sbjct: 296 TYTLLMELSVKNGKMSDAEKLFDEMRERGIE--------------SDVHVYTSLIS 337
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFS 126
+G+ P + Y ALI G+ + G + A L EM GV + ++ L+D CR G
Sbjct: 358 KGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCR-KGMVD 416
Query: 127 KAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
+A ++D M QK GF V T N + + L R+ EA L M E G+
Sbjct: 417 EASMIYDVMEQK-------GFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLST 469
Query: 187 VSYSTVISWFHRNRELGKAYELKVEMDEKDI 217
VSY+ +I + + + +A L VEM K +
Sbjct: 470 VSYTNLIDVYCKEGNVEEAKRLFVEMSSKGV 500
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 7/130 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ P+ Y+ +I +QG++ EA L M +G+ PD YTY+ L+ + +
Sbjct: 498 KGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDE 557
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L EM K G VTY +I G G+ EA G+ M G D
Sbjct: 558 AMRLFSEMGLK-------GLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNK 610
Query: 188 SYSTVISWFH 197
Y+ +I H
Sbjct: 611 VYTALIGSMH 620
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 8/174 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G LP Y+ +I Q R + L +M G+LP+ T++ L+D +G F+
Sbjct: 508 RGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFND 567
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A +EM KS+ G P YNALI+ Y G +A+ R M GL P +
Sbjct: 568 AIECLEEM--KSV-----GLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLL 620
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSV 241
+ +++I+ F +R +A+ + M E + D T +LMK L VD + V
Sbjct: 621 ALNSLINAFGEDRRDAEAFAVLQYMKENGV-KPDVVTYTTLMKALIRVDKFQKV 673
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 7/130 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
GI P Y+AL+ G + G L +A + EM + GV PDE+TYSLL+D G + A
Sbjct: 334 GIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESA 393
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+ EM + P ++ L+ G+ G + + +L+ M +G+ PD
Sbjct: 394 RIVLKEMEAGDV-------QPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQF 446
Query: 189 YSTVISWFHR 198
Y+ VI F +
Sbjct: 447 YNVVIDTFGK 456
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 14/142 (9%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF 129
+ P++ +S L+ G +G + + +EM GV PD Y++++DT A
Sbjct: 405 VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAM 464
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
D M+ + G P VT+N LI +C GR + A + M G P A +Y
Sbjct: 465 TTFDRMLSE-------GIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTY 517
Query: 190 STVIS-------WFHRNRELGK 204
+ +I+ W R LGK
Sbjct: 518 NIMINSYGDQERWDDMKRLLGK 539
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 7/134 (5%)
Query: 79 ALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQK 138
++I L GR EA LF E+ +SG+ P Y+ L+ TG A + EM ++
Sbjct: 309 SIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKR 368
Query: 139 SLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHR 198
G SP TY+ LI Y GR+ A +L+ M + P++ +S +++ F
Sbjct: 369 -------GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRD 421
Query: 199 NRELGKAYELKVEM 212
E K +++ EM
Sbjct: 422 RGEWQKTFQVLKEM 435
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+ PD Y+ +I + L A+ F M+ G+ PD T++ L+D G A
Sbjct: 439 GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVA 498
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+ + M ++ G P TYN +I+ Y R+ + +L M G+ P+ V+
Sbjct: 499 EEMFEAMERR-------GCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVT 551
Query: 189 YSTVISWFHRNRELGKAYELKVEM 212
++T++ + ++ A E EM
Sbjct: 552 HTTLVDVYGKSGRFNDAIECLEEM 575
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 18/185 (9%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMV--RSGVLPDEYTYSLLMDTCRLTGEFS 126
G + D Y L+ G + + EA++ + E V S V Y+ +++ G+F
Sbjct: 268 GFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFD 327
Query: 127 KAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
+A L D + K + + + T+N +++GYC G+F EAM + R M + PD
Sbjct: 328 EALKLFDAV--KKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDT 385
Query: 187 VSYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYF 246
+S++ +++ N L +A +L EM+EK++ D TY +M+ F
Sbjct: 386 LSFNNLMNQLCDNELLAEAEKLYGEMEEKNVK--------------PDEYTYGLLMDTCF 431
Query: 247 AEGSI 251
EG I
Sbjct: 432 KEGKI 436
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 8/161 (4%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
PD ++ L+ L L+EA L+ EM V PDEYTY LLMDTC G+ +
Sbjct: 383 PDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAY 442
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
+ M++ +L P + YN L G+ +A M L D +Y
Sbjct: 443 YKTMVESNL-------RPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVS-KLKMDDEAYKF 494
Query: 192 VISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDL 232
++ L + ++ EM + D + E +E + ++L
Sbjct: 495 IMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEEL 535
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+ PD +S L+ G + +++ +M+ G+ PD + +S+L GE KA
Sbjct: 596 GVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKA 655
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEM-GLPPDAV 187
+ ++M + G P VV Y +I G+C G +AM + + M + GL P+
Sbjct: 656 EQILNQMRK-------FGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLT 708
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDI 217
+Y T+I F ++ KA EL +M+ K++
Sbjct: 709 TYETLIWGFGEAKQPWKAEELLKDMEGKNV 738
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 9/180 (5%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
D+A K++ +M +SG PT T+ TL E + P++
Sbjct: 406 DQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRD---EMLQPNDRT 462
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
+ L+ Q ++ EA ++ +M GV PD T++ L G A D +I
Sbjct: 463 CNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTA---EDMII 519
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+ L + V P V T +++GYC G+ EA+ M E+G+ P+ ++++I F
Sbjct: 520 PRMLHNKV---KPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGF 576
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Query: 73 DNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLH 132
D + L+ GL ++GR EA +F ++ G P TY+ L+ LT + K FH
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTA--LTRQ--KHFHSL 373
Query: 133 DEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTV 192
+I K + G P + +NA+I+ G +AM I M E G P A +++T+
Sbjct: 374 LSLISKVEKN---GLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTL 430
Query: 193 ISWFHRNRELGKAYEL 208
I + + +L ++ L
Sbjct: 431 IKGYGKIGKLEESSRL 446
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 13/147 (8%)
Query: 69 GILPDNNGYSALILGLYQQGRL---SEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEF 125
G+ P+ +++LI G + E +DL E GV PD T+S LM+ G+
Sbjct: 561 GVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEF---GVKPDVVTFSTLMNAWSSVGDM 617
Query: 126 SKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPD 185
+ ++ +M++ G P + ++ L GY G +A IL M + G+ P+
Sbjct: 618 KRCEEIYTDMLE-------GGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPN 670
Query: 186 AVSYSTVISWFHRNRELGKAYELKVEM 212
V Y+ +IS + E+ KA ++ +M
Sbjct: 671 VVIYTQIISGWCSAGEMKKAMQVYKKM 697
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Query: 93 ALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVV 152
AL M G+ P Y+ L+D ++GE KA + EM V G P V
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMT-------VKGQLPNVF 760
Query: 153 TYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEM 212
TYN++I G C G F EA +L+ M G P+ V YST++ + + +L +A ++ EM
Sbjct: 761 TYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEM 820
Query: 213 DEK 215
+K
Sbjct: 821 VKK 823
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
GI P Y+ LI G G L +A ++FREM G LP+ +TY+ ++ + GEF +A
Sbjct: 719 GIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREA 778
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMG 181
L EM + G +P V Y+ L+ G+ EA +++ M + G
Sbjct: 779 CWLLKEMESR-------GCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 20/184 (10%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
EG PD YS +I L + G+L +AL+LF EM GV PD Y++L+D +
Sbjct: 178 EGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKT 237
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L D +++ S P V T+N +I G GR + + I M + D
Sbjct: 238 AMELWDRLLEDS------SVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLY 291
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFA 247
+YS++I + KA + E+DE+ K DV TY +++ +
Sbjct: 292 TYSSLIHGLCDAGNVDKAESVFNELDER--------------KASIDVVTYNTMLGGFCR 337
Query: 248 EGSI 251
G I
Sbjct: 338 CGKI 341
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 7/133 (5%)
Query: 76 GYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEM 135
Y+++I L ++ RL EA +L +EM + GV + + + L+ +A EM
Sbjct: 431 AYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREM 490
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISW 195
+ G P VV+YN LI G C G+F EA ++ M E G PD +YS ++
Sbjct: 491 GK-------NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCG 543
Query: 196 FHRNRELGKAYEL 208
R+R++ A EL
Sbjct: 544 LCRDRKIDLALEL 556
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 7/130 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G P Y+ LI GL + G+ EA +EM+ +G PD TYS+L+ + A
Sbjct: 494 GCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLA 553
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L + +Q +G V+ +N LIHG C +G+ +AM ++ M + V+
Sbjct: 554 LELWHQFLQ-------SGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVT 606
Query: 189 YSTVISWFHR 198
Y+T++ F +
Sbjct: 607 YNTLMEGFFK 616
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 7/140 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G P Y+ L+ + + + LF +GV P+ TY++L+ EF KA
Sbjct: 109 GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
D M ++ GF P V +Y+ +I+ G+ +A+ + M+E G+ PD
Sbjct: 169 RGFLDWMWKE-------GFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTC 221
Query: 189 YSTVISWFHRNRELGKAYEL 208
Y+ +I F + ++ A EL
Sbjct: 222 YNILIDGFLKEKDHKTAMEL 241
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 68/141 (48%), Gaps = 8/141 (5%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ ++ G + G++ E+L+L+R M + + +Y++L+ G+ +A + M
Sbjct: 328 YNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIWRLMP 386
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
K G++ TY IHG C G +A+G+++ + G D +Y+++I
Sbjct: 387 AK-------GYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCL 439
Query: 197 HRNRELGKAYELKVEMDEKDI 217
+ + L +A L EM + +
Sbjct: 440 CKKKRLEEASNLVKEMSKHGV 460
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 69/126 (54%), Gaps = 8/126 (6%)
Query: 90 LSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVTGFSP 149
+ +A+++ EM + G+ PDEY + L+D G +A + ++M +K F P
Sbjct: 183 VKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK--------FPP 234
Query: 150 FVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELK 209
+ + +L++G+C G+ +EA +L M E GL PD V ++ ++S + ++ AY+L
Sbjct: 235 NLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLM 294
Query: 210 VEMDEK 215
+M ++
Sbjct: 295 NDMRKR 300
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 8/148 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSK 127
G+ PD ++ L+ G G++++A DL +M + G P+ Y++L+ CR +
Sbjct: 266 GLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDE 325
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + EM + G +VTY ALI G+C G + +L M + G+ P V
Sbjct: 326 AMRVFVEMER-------YGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQV 378
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEK 215
+Y ++ + + + EL +M +
Sbjct: 379 TYMQIMVAHEKKEQFEECLELIEKMKRR 406
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 105/254 (41%), Gaps = 32/254 (12%)
Query: 3 FTSEIGLMFHWLKPDK---ASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXX 59
FTS L++ W + K A +V QM ++G+ P + + L
Sbjct: 239 FTS---LLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMN 295
Query: 60 XXXXXXXXEGILPDNNGYSALILGLYQ-QGRLSEALDLFREMVRSGVLPDEYTYSLLMDT 118
G P+ N Y+ LI L + + R+ EA+ +F EM R G D TY+ L+
Sbjct: 296 DMRK----RGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISG 351
Query: 119 CRLTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMA 178
G K + + D+M +K G P VTY ++ + +F E + ++ M
Sbjct: 352 FCKWGMIDKGYSVLDDMRKK-------GVMPSQVTYMQIMVAHEKKEQFEECLELIEKMK 404
Query: 179 EMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTY 238
G PD + Y+ VI + E+ +A L EM+ + VDT+
Sbjct: 405 RRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLS--------------PGVDTF 450
Query: 239 TSVMNDYFAEGSIL 252
++N + ++G ++
Sbjct: 451 VIMINGFTSQGFLI 464
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 19/185 (10%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMD-TCRLTGEFS 126
+G++P Y +++ ++ + E L+L +M R G PD Y++++ C+L GE
Sbjct: 371 KGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKL-GEVK 429
Query: 127 KAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
+A L +EM G SP V T+ +I+G+ G +EA + M G+ A
Sbjct: 430 EAVRLWNEM-------EANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI-FSA 481
Query: 187 VSYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYF 246
Y T+ S + + K+EM KD+W N S ++S +T ++ +
Sbjct: 482 PQYGTLKSLLN-----NLVRDDKLEM-AKDVWSCISNKTSSCELNVS---AWTIWIHALY 532
Query: 247 AEGSI 251
A+G +
Sbjct: 533 AKGHV 537
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 67/148 (45%), Gaps = 10/148 (6%)
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFH 130
PD YSALI + GR A+ LF EM + + P E Y+ L+ G+ KA
Sbjct: 230 FPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALD 289
Query: 131 LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYS 190
L +EM + G SP V TY LI G GR EA G + M GL PD V +
Sbjct: 290 LFEEMKR-------AGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLN 342
Query: 191 TVISWFHRNRELGKAYELKVEMDEKDIW 218
+++ + +G+ EL E +W
Sbjct: 343 NLMNILGK---VGRVEELTNVFSEMGMW 367
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 7/126 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G PD Y+AL+ G+ + G ++EA L R+M +G D +++++++ TG +
Sbjct: 508 QGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRR 567
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + E I+ S G P VTYN L+ + G F EA ++R M + G DA+
Sbjct: 568 AIEMF-ETIKHS------GIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAI 620
Query: 188 SYSTVI 193
+YS+++
Sbjct: 621 TYSSIL 626
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 88/229 (38%), Gaps = 33/229 (14%)
Query: 15 KPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDN 74
+ D A +++ +M D+ + PT Y TL G P
Sbjct: 248 RNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRA----GCSPTV 303
Query: 75 NGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDE 134
Y+ LI GL + GR+ EA +++M+R G+ PD + LM+ G + ++ E
Sbjct: 304 YTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSE 363
Query: 135 MIQKSLTDFVTGF-----------------------------SPFVVTYNALIHGYCFLG 165
M T V + SP TY+ LI GYC
Sbjct: 364 MGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTN 423
Query: 166 RFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDE 214
R +A+ +L M E G PP +Y ++I+ + + A EL E+ E
Sbjct: 424 RVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKE 472
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ +I + G+LSEA+DLF EM G PD Y Y+ LM G ++A L +M
Sbjct: 482 YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKME 541
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+ G + ++N +++G+ G A+ + + G+ PD V+Y+T++ F
Sbjct: 542 E-------NGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCF 594
Query: 197 HRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVD 236
+A + EM +K + D T S++ + +VD
Sbjct: 595 AHAGMFEEAARMMREMKDKGFEY-DAITYSSILDAVGNVD 633
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 16/148 (10%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
P Y+ L+ ++ G++ +ALDLF EM R+G P YTY+ L+ G +A+
Sbjct: 266 PTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGF 325
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
+ +M++ LT P VV N L++ +GR E + M P VSY+T
Sbjct: 326 YKDMLRDGLT-------PDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNT 378
Query: 192 VISWFHRNRELGKAYELKVEMDEKDIWW 219
VI +E K + E W+
Sbjct: 379 VIKAL---------FESKAHVSEVSSWF 397
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G P Y +LI L + R A +LF+E+ + Y++++ G+ S+
Sbjct: 438 KGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSE 497
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L +EM + G P V YNAL+ G G EA +LR M E G D
Sbjct: 498 AVDLFNEMKNQ-------GSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADIN 550
Query: 188 SYSTVISWFHRNRELGKAYEL 208
S++ +++ F R +A E+
Sbjct: 551 SHNIILNGFARTGVPRRAIEM 571
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 80/149 (53%), Gaps = 21/149 (14%)
Query: 71 LPDNN--GYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
+P+ N +++++ L Q+GR+ EA++LF M R V+ +++ ++D G+ +A
Sbjct: 166 MPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVV----SWTAMVDGLAKNGKVDEA 221
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L D M +++ ++++NA+I GY R EA + + M E D S
Sbjct: 222 RRLFDCMPERN-----------IISWNAMITGYAQNNRIDEADQLFQVMPER----DFAS 266
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDI 217
++T+I+ F RNRE+ KA L M EK++
Sbjct: 267 WNTMITGFIRNREMNKACGLFDRMPEKNV 295
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 26/144 (18%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLH---- 132
++A+I GL GR +EA+++F +M RSG+ PD++T + +C G+ S AF LH
Sbjct: 186 WNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVL 245
Query: 133 --------DEMIQKSLTD--------------FVTGFSPFVVTYNALIHGYCFLGRFVEA 170
D M+ SL D F VV+++++I GY G +EA
Sbjct: 246 QAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEA 305
Query: 171 MGILRGMAEMGLPPDAVSYSTVIS 194
+ R M E G+ P+ +++ V+S
Sbjct: 306 LECFRQMREFGVRPNKITFVGVLS 329
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 7/145 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
EG PD Y+ L+ ++GRL EA L++ M R V+PD TY+ L+ G +
Sbjct: 265 EGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVRE 324
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A M+ + G P ++YN LI+ YC G ++ +L M + PD
Sbjct: 325 AHQTFHRMVDR-------GIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRF 377
Query: 188 SYSTVISWFHRNRELGKAYELKVEM 212
+ ++ F R L A VE+
Sbjct: 378 TCKVIVEGFVREGRLLSAVNFVVEL 402
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSK 127
GI P+ ++ L E D +M G PD TY+ L+ + CR G +
Sbjct: 231 GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCR-RGRLKE 289
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
AF+L+ M ++ + P +VTY +LI G C GR EA M + G+ PD +
Sbjct: 290 AFYLYKIMYRRRVV-------PDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCM 342
Query: 188 SYSTVISWFHRNRELGKAYELKVEM 212
SY+T+I + + + ++ +L EM
Sbjct: 343 SYNTLIYAYCKEGMMQQSKKLLHEM 367
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Query: 100 MVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIH 159
M R G+ P+ YT+++L + F + D+ ++K + GF P +VTYN L+
Sbjct: 227 MCRVGIHPNTYTFNILTNVFCNDSNFREV----DDFLEKMEEE---GFEPDLVTYNTLVS 279
Query: 160 GYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYE 207
YC GR EA + + M + PD V+Y+++I ++ + +A++
Sbjct: 280 SYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQ 327
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 7/139 (5%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF 129
I P Y+++I G +Q R+ +A + M G PD T+S L++
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
+ EM ++ G VTY LIHG+C +G A +L M G+ PD +++
Sbjct: 66 EIFCEMHRR-------GIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITF 118
Query: 190 STVISWFHRNRELGKAYEL 208
+++ +EL KA+ +
Sbjct: 119 HCMLAGLCSKKELRKAFAI 137
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 100 MVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIH 159
M+R + P TY+ ++D A + D M K G SP VVT++ LI+
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASK-------GCSPDVVTFSTLIN 53
Query: 160 GYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEM 212
GYC R M I M G+ + V+Y+T+I F + +L A +L EM
Sbjct: 54 GYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM 106
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 149 PFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYEL 208
P +TYN++I G+C R +A +L MA G PD V++ST+I+ + + + + E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 209 KVEMDEKDI 217
EM + I
Sbjct: 68 FCEMHRRGI 76
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 25/172 (14%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
GI D ++A+I GL G +ALD+FR+M +GV+P+ T + C ++
Sbjct: 312 GITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQG 371
Query: 129 FHLH----------DEMIQKSLTDFVTGFSPF--------------VVTYNALIHGYCFL 164
+H D ++ SL D + V T+N++I GYC
Sbjct: 372 SEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQA 431
Query: 165 GRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKD 216
G +A + M + L P+ ++++T+IS + +N + G+A +L M EKD
Sbjct: 432 GYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRM-EKD 482
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 24/161 (14%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
+SA+I ++ R E LFR M++ GVLPD++ + ++ C G+ +H +I
Sbjct: 149 WSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVI 208
Query: 137 QKSLT-------------------DFVTGF-----SPFVVTYNALIHGYCFLGRFVEAMG 172
+ ++ DF T F V+ +N+++ YC G+ EA+
Sbjct: 209 KLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVE 268
Query: 173 ILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMD 213
+++ M + G+ P V+++ +I +++ + A +L +M+
Sbjct: 269 LVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKME 309
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 23/165 (13%)
Query: 73 DNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLH 132
D GY+ +I GL + G+ EA ++F ++ SG+ PD TY++++ L +A L+
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSL----GRAEKLY 68
Query: 133 DEMIQKSLT-DFVT------------------GFSPFVVTYNALIHGYCFLGRFVEAMGI 173
EMI++ L D +T S T+N LI+GYC R + M +
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATRVKDGMNL 128
Query: 174 LRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDIW 218
M G+ + ++Y+T+I F + + A ++ EM ++
Sbjct: 129 FCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVY 173
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 4 TSEIGLMFHWL----KPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXX 59
T+ ++ H L K D+A ++ ++ SG+ P V TY +
Sbjct: 14 TAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSLGRAEKLYAEMIR 73
Query: 60 XXXXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTC 119
G++PD Y+++I GL +Q +L++A + + L + Y C
Sbjct: 74 --------RGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGY--------C 117
Query: 120 RLTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAE 179
+ T +L EM ++ G V+TY LIHG+ +G F A+ I + M
Sbjct: 118 KAT-RVKDGMNLFCEMYRR-------GIVANVITYTTLIHGFRQVGDFNTALDIFQEMVS 169
Query: 180 MGLPPDAVSYSTVISWFHRNRELGKAYELKVE 211
G+ ++++ ++ +EL KA + ++
Sbjct: 170 NGVYSSSITFRDILPQLCSRKELRKAVAMLLQ 201
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 16/181 (8%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G + + N ++ +I ++ +L EAL +F M++ GV P+ ++++++D TG+ A
Sbjct: 213 GYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFA 272
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L +M S +FV SP VTYN++I+G+C GR A I M + G+ + +
Sbjct: 273 LQLLGKMGMMS-GNFV---SPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERT 328
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDI------------WWLDENTRESLMKDLSDVD 236
Y ++ + R +A L EM K + W E E M L D++
Sbjct: 329 YGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMN 388
Query: 237 T 237
+
Sbjct: 389 S 389
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 7/148 (4%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF 129
+ P+ Y+++I G + GRL A + +MV+SGV +E TY L+D G +A
Sbjct: 287 VSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEAL 346
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
L DEM K G V YN++++ G AM +LR M + D +
Sbjct: 347 RLCDEMTSK-------GLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQ 399
Query: 190 STVISWFHRNRELGKAYELKVEMDEKDI 217
+ V+ RN + +A E + ++ EK +
Sbjct: 400 AIVVRGLCRNGYVKEAVEFQRQISEKKL 427
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y++++ GL ++G A +V + + D TY+ L++ TG +A + +M
Sbjct: 504 YNSIVNGLSKRGMAGAA----EAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQ 559
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
++ V+ +VT+N +I+ C G + +A +L+ M E G+ PD+++Y T+I+ F
Sbjct: 560 KQDGEKSVS-----LVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSF 614
Query: 197 HRNRELGKAYEL 208
++R K EL
Sbjct: 615 SKHRSQEKVVEL 626
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/201 (19%), Positives = 92/201 (45%), Gaps = 24/201 (11%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G++ + Y++++ L+ +G + A+ + R+M + D +T ++++ G +
Sbjct: 355 KGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKE 414
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A ++ +K L + + V +N L+H + + A IL M GL DA+
Sbjct: 415 AVEFQRQISEKKLVEDI-------VCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAI 467
Query: 188 SYSTVISWFHRNRELGKAYEL---KVEMDEKDIWWLDENTRESLMK-------------- 230
S+ T+I + + +L +A E+ ++M++ + + L K
Sbjct: 468 SFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAM 527
Query: 231 DLSDVDTYTSVMNDYFAEGSI 251
++ D+ TY +++N+ G++
Sbjct: 528 EIKDIVTYNTLLNESLKTGNV 548
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 84/206 (40%), Gaps = 39/206 (18%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVL---PDEYTYSLLMDTCRLTGEF 125
G P+N Y A I Q G + EA DLF M+ G P T++L++ +
Sbjct: 298 GHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKA 357
Query: 126 SKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPD 185
+ F L MI TG P V TY +I G C + EA L M+ G PPD
Sbjct: 358 EECFELIGRMIS-------TGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPD 410
Query: 186 AVSYSTVISWFHRNRELGKAYELK----------------------VEMDEKD---IWWL 220
V+Y+ + NR+ +A +L EMD+ D W
Sbjct: 411 IVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWT 470
Query: 221 DENTRESLMKDLSDVDTYTSVMNDYF 246
+ + R+ + DV+TY +++N F
Sbjct: 471 EMDKRDC----VQDVETYCAMINGLF 492
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
PD+ YS L+ G ++ L +A ++FREM+ +G PD TYS+++D G +A
Sbjct: 235 PDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALG- 293
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
I +S+ + + F+ Y+ L+H Y R EA+ M G+ D +++
Sbjct: 294 ----IVRSMDPSICKPTTFI--YSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNS 347
Query: 192 VISWFHRNRELGKAYELKVEMDEKDI 217
+I F + + Y + EM K +
Sbjct: 348 LIGAFCKANRMKNVYRVLKEMKSKGV 373
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 8/143 (5%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
P+ ++ L+ L + + +A ++F M R PD TYS+L++ KA +
Sbjct: 201 PNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREV 259
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
EMI G P +VTY+ ++ C GR EA+GI+R M P YS
Sbjct: 260 FREMID-------AGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSV 312
Query: 192 VISWFHRNRELGKAYELKVEMDE 214
++ + L +A + +EM+
Sbjct: 313 LVHTYGTENRLEEAVDTFLEMER 335
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 14/202 (6%)
Query: 18 KASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGY 77
KA +V+ +MID+G P + TY + P Y
Sbjct: 255 KAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICK----PTTFIY 310
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
S L+ + RL EA+D F EM RSG+ D ++ L+ G F KA + + +
Sbjct: 311 SVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLI------GAFCKANRMKN--VY 362
Query: 138 KSLTDFVT-GFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+ L + + G +P + N ++ G EA + R M ++ PDA +Y+ VI F
Sbjct: 363 RVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMF 421
Query: 197 HRNRELGKAYELKVEMDEKDIW 218
+E+ A ++ M +K ++
Sbjct: 422 CEKKEMETADKVWKYMRKKGVF 443
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ P++ + ++ L ++G EA D+FR+M++ PD TY++++ E
Sbjct: 371 KGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMET 429
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + M +K G P + T++ LI+G C +A +L M EMG+ P V
Sbjct: 430 ADKVWKYMRKK-------GVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGV 482
Query: 188 SY 189
++
Sbjct: 483 TF 484
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 7/147 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
GI P+ + L+ L ++ + A + E+ G++P+ TY+ ++ G+ A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+ +EM+ + G+ P TY L+ GYC LGRF EA ++ M + + P+ V+
Sbjct: 246 KRVLEEMLDR-------GWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVT 298
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEK 215
Y +I + ++ G+A + EM E+
Sbjct: 299 YGVMIRALCKEKKSGEARNMFDEMLER 325
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFH 130
+PD++ +I L + ++ EA L+R+M+++ +PD S L+ G ++A
Sbjct: 328 MPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARK 387
Query: 131 LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYS 190
L DE F G P ++TYN LI G C G EA + M E P+A +Y+
Sbjct: 388 LFDE--------FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYN 439
Query: 191 TVISWFHRNRELGKAYELKVEMDE 214
+I +N + + + EM E
Sbjct: 440 VLIEGLSKNGNVKEGVRVLEEMLE 463
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
+PDN S LI L ++GR++EA LF E + G +P TY+ L+ GE ++A
Sbjct: 361 NCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTEA 419
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L D+M ++ P TYN LI G G E + +L M E+G P+
Sbjct: 420 GRLWDDMYERKC-------KPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNK-- 470
Query: 189 YSTVISWFHRNRELGK 204
+T + F ++LGK
Sbjct: 471 -TTFLILFEGLQKLGK 485
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD Y+ L+ G + GR SEA + +M ++ + P+E TY +++ + +A
Sbjct: 256 GWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEA 315
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
++ DEM+++S F P +I C + EA G+ R M + PD
Sbjct: 316 RNMFDEMLERS-------FMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNAL 368
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDI 217
ST+I W + + +A +L E ++ I
Sbjct: 369 LSTLIHWLCKEGRVTEARKLFDEFEKGSI 397
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 71 LPDNN-GYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF 129
+P N+ Y+ LI G ++G + EA DL ++M + GV PD +TY+ + C G+ ++A
Sbjct: 725 IPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRAT 784
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
+EM G P + TY LI G+ +A+ M MG+ PD Y
Sbjct: 785 QTIEEM-------EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVY 837
Query: 190 STVISWFHRNRELGKAY 206
+++ + +AY
Sbjct: 838 HCLLTSLLSRASIAEAY 854
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 21/175 (12%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G +P + ++ LI GL ++ ++ +A+++ EM +GV +E+TY+ +M G+ KA
Sbjct: 619 GCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA 678
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
F + + G + TY AL+ C GR A+ + + M+ +P ++
Sbjct: 679 FEYFTRLQNE-------GLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFV 731
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMN 243
Y+ +I + R ++ +A +L +M ++ + D+ TYTS ++
Sbjct: 732 YNILIDGWARRGDVWEAADLIQQMKKEGV--------------KPDIHTYTSFIS 772
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 69/145 (47%), Gaps = 7/145 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+ + + Y+ ++ G G +A + F + G+ D +TY L+ C +G A
Sbjct: 654 GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSA 713
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+ EM +++ + FV YN LI G+ G EA +++ M + G+ PD +
Sbjct: 714 LAVTKEMSARNIPR-----NSFV--YNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHT 766
Query: 189 YSTVISWFHRNRELGKAYELKVEMD 213
Y++ IS + ++ +A + EM+
Sbjct: 767 YTSFISACSKAGDMNRATQTIEEME 791
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 89/228 (39%), Gaps = 25/228 (10%)
Query: 22 VYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYSALI 81
V+ ++ + G TPTV TY L EG+ + YS +I
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKE----EGVKHNLKTYSMMI 526
Query: 82 LGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLT 141
G + + A +F +MV+ G+ PD Y+ ++ G +A EM QK
Sbjct: 527 NGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM-QK--- 582
Query: 142 DFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRE 201
P T+ +IHGY G ++ + M G P +++ +I+ R+
Sbjct: 583 ---LRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQ 639
Query: 202 LGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEG 249
+ KA E+ LDE T L ++ TYT +M Y + G
Sbjct: 640 MEKAVEI-----------LDEMT---LAGVSANEHTYTKIMQGYASVG 673
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 7/132 (5%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y +I Q + A L REM G+ Y +MD + + K ++
Sbjct: 417 YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGL-----VV 471
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
K L + GF+P VVTY LI+ Y +G+ +A+ + R M E G+ + +YS +I+ F
Sbjct: 472 FKRLKE--CGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGF 529
Query: 197 HRNRELGKAYEL 208
+ ++ A+ +
Sbjct: 530 VKLKDWANAFAV 541
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 7/145 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
EG+ D Y AL+ + GR+ AL + +EM + + + Y++L+D G+ +
Sbjct: 688 EGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWE 747
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L +M ++ G P + TY + I G A + M +G+ P+
Sbjct: 748 AADLIQQMKKE-------GVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIK 800
Query: 188 SYSTVISWFHRNRELGKAYELKVEM 212
+Y+T+I + R KA EM
Sbjct: 801 TYTTLIKGWARASLPEKALSCYEEM 825
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVR-SGVLPDEYTYSLLMDTCRLTGEFSK 127
G D Y+ +I +QG+L AL L+++M SG PD TY++L+D+ +
Sbjct: 397 GFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVE 456
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L EM+ G P + TY+ALI GY G+ EA M G PD +
Sbjct: 457 AAALMSEMLD-------VGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNL 509
Query: 188 SYSTVISWFHRNRELGKAYELKVEM 212
+YS ++ R E KA+ L +M
Sbjct: 510 AYSVMLDVLLRGNETRKAWGLYRDM 534
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
GI P YSALI G + G+ EA D F M+RSG PD YS+++D E KA
Sbjct: 468 GIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKA 527
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEM-GLPPDAV 187
+ L+ +MI G +P Y +I G R + +R M E+ G+ P +
Sbjct: 528 WGLYRDMISD-------GHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEI 580
Query: 188 S 188
S
Sbjct: 581 S 581
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDL-FREMVR-SGVLPDEYTYSLLMDTCRLTGEFS 126
G +PD ++ LI + G L+ L + +MVR SG+ PD TY+ L+ C
Sbjct: 255 GCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLD 314
Query: 127 KAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
A + ++M P + TYNA+I Y G EA + + G PDA
Sbjct: 315 GAVKVFEDMEAHRC-------QPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDA 367
Query: 187 VSYSTVISWFHRNRELGKAYELKVEMDE 214
V+Y++++ F R R K E+ +M +
Sbjct: 368 VTYNSLLYAFARERNTEKVKEVYQQMQK 395
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G PD Y++L+ ++ + +++++M + G DE TY+ ++ G+
Sbjct: 361 KGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDL 420
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L+ +M ++G +P +TY LI R VEA ++ M ++G+ P
Sbjct: 421 ALQLYKDM------KGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQ 474
Query: 188 SYSTVISWFHR 198
+YS +I + +
Sbjct: 475 TYSALICGYAK 485
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+ PD Y+ L+ + L A+ +F +M PD +TY+ ++ G ++A
Sbjct: 292 GLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEA 351
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L E+ K GF P VTYN+L++ + + + + M +MG D ++
Sbjct: 352 ERLFMELELK-------GFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMT 404
Query: 189 YSTVISWFHRNRELGKAYELKVEM 212
Y+T+I + + +L A +L +M
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDM 428
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 81/200 (40%), Gaps = 11/200 (5%)
Query: 18 KASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGY 77
K +VY ++ ++G+ P TY TL G+ P + Y
Sbjct: 945 KTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNL----GLDPKLDTY 1000
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
+LI +Q L +A LF E++ G+ D Y +M R +G SKA L M
Sbjct: 1001 KSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKN 1060
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFH 197
G P + T + L+ Y G EA +L + + + + YS+VI +
Sbjct: 1061 -------AGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYL 1113
Query: 198 RNRELGKAYELKVEMDEKDI 217
R+++ E +EM ++ +
Sbjct: 1114 RSKDYNSGIERLLEMKKEGL 1133
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 10/165 (6%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G++ N Y +I L +G L A+ L M+++ +P +Y +++ + KA
Sbjct: 1045 GMMAPN--YDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKA 1102
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
H EM++ G SP + T++ L+H +C + +E+ +++ M +G P
Sbjct: 1103 MDFHTEMVE-------LGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEM 1155
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLS 233
+ TVI F + KA E+ +EM +K + +D T SL+ ++S
Sbjct: 1156 FKTVIDRFRVEKNTVKASEM-MEMMQKCGYEVDFETHWSLISNMS 1199
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 6/147 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
GI PD Y+ +I G + AL F EM G+ P + +Y+ LM ++G+ A
Sbjct: 518 GIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLA 577
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+ DEM+ ++ +N L+ GYC LG +A ++ M E G P+ +
Sbjct: 578 NRVFDEMMNDPRVKV------DLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVAT 631
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEK 215
Y ++ + + R+ G A L E+ E+
Sbjct: 632 YGSLANGVSQARKPGDALLLWKEIKER 658
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 11/126 (8%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRS---GVLPDEYTYSLLMDTCRLTGEFSKA 128
PD+ Y+ L+ G + GR+++ + M R PDE TY+ ++ G +A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAE-MGLPPDAV 187
+ EM + G +TYN L+ GYC + A +LR M E G+ PD V
Sbjct: 472 RQVLAEMAR-------MGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVV 524
Query: 188 SYSTVI 193
SY+ +I
Sbjct: 525 SYNIII 530
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 6/125 (4%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
PD Y+ ++ G + A + EM R GV + TY++L+ + +A L
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
EM + + G P VV+YN +I G + A+ M G+ P +SY+T
Sbjct: 510 LREMTEDA------GIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTT 563
Query: 192 VISWF 196
++ F
Sbjct: 564 LMKAF 568
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 21 KVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYSAL 80
K++ +M D GV T+ +Y +L EG+ P + Y+ +
Sbjct: 206 KIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVS----EGVEPTRHTYNLM 261
Query: 81 ILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSKAFHLHDEMIQKS 139
+ G + RL AL F +M G+ PD+ T++ +++ CR + +A L EM
Sbjct: 262 LWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFK-KMDEAEKLFVEMKGNK 320
Query: 140 LTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVI 193
+ P VV+Y +I GY + R + + I M G+ P+A +YST++
Sbjct: 321 I-------GPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLL 367
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 7/120 (5%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y++L + ++GR A F +MV GV P +TY+L++ L+ A ++M
Sbjct: 223 YNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMK 282
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+ G SP T+N +I+G+C + EA + M + P VSY+T+I +
Sbjct: 283 TR-------GISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGY 335
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 65/166 (39%), Gaps = 11/166 (6%)
Query: 19 ASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYS 78
A + + +M+ GV PT TY + GI PD+ ++
Sbjct: 239 AKRYFNKMVSEGVEPTRHTYNLM----LWGFFLSLRLETALRFFEDMKTRGISPDDATFN 294
Query: 79 ALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQK 138
+I G + ++ EA LF EM + + P +Y+ ++ + +EM
Sbjct: 295 TMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRS- 353
Query: 139 SLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPP 184
+G P TY+ L+ G C G+ VEA IL+ M + P
Sbjct: 354 ------SGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAP 393
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ D + + LI + G + E++ +F++M GV +Y+ L G +
Sbjct: 179 KGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMM 238
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A ++M+ + G P TYN ++ G+ R A+ M G+ PD
Sbjct: 239 AKRYFNKMVSE-------GVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDA 291
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDI 217
+++T+I+ F R +++ +A +L VEM I
Sbjct: 292 TFNTMINGFCRFKKMDEAEKLFVEMKGNKI 321
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 23/168 (13%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ D Y +I GL G+L EA ++ +M +S ++PD ++ +M+ +G
Sbjct: 297 QGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKA 356
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFV-----------------------VTYNALIHGYCFL 164
A +++ ++I++ V S + V Y LI C
Sbjct: 357 AVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKE 416
Query: 165 GRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEM 212
G F+E + ++E GL PD Y++ I+ + L A++LK M
Sbjct: 417 GDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRM 464
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+ + P+ ++ LI G + G L A+ L++EM R + + TY+ L+D GE +
Sbjct: 192 DALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQR 251
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A ++ M++ + P + Y +I G+ G AM L M G+ D
Sbjct: 252 AEEMYSRMVEDRV-------EPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDIT 304
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFA 247
+Y +IS N +L +A E+ +M++ D+ + D+ +T++MN YF
Sbjct: 305 AYGVIISGLCGNGKLKEATEIVEDMEKSDL--------------VPDMVIFTTMMNAYFK 350
Query: 248 EGSI 251
G +
Sbjct: 351 SGRM 354
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 20/169 (11%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTY-SLLMDTCRLTGEFSKAFHLHDEM 135
Y+ LI L ++G E LF ++ +G++PD++ Y S + C+ G AF L M
Sbjct: 406 YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCK-QGNLVDAFKLKTRM 464
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISW 195
+Q+ G ++ Y LI+G G VEA + M G+ PD+ + +I
Sbjct: 465 VQE-------GLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRA 517
Query: 196 FHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMND 244
+ + + A +L ++M R L+ +SD D N+
Sbjct: 518 YEKEGNMAAASDLLLDMQ-----------RRGLVTAVSDADCSKQCGNE 555
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 22/178 (12%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
PD +++L G + L E M++ P+ TYS +DT +GE A
Sbjct: 127 PDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQLALKS 185
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
M + +L SP VVT+ LI GYC G A+ + + M + + + V+Y+
Sbjct: 186 FHSMKRDAL-------SPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTA 238
Query: 192 VISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEG 249
+I F + E+ +A E+ M E D SL+ YT++++ +F G
Sbjct: 239 LIDGFCKKGEMQRAEEMYSRMVE------DRVEPNSLV--------YTTIIDGFFQRG 282
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G++PD Y++ I GL +QG L +A L MV+ G+L D Y+ L+ G +A
Sbjct: 433 GLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEA 492
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGL 182
+ DEM+ +G SP ++ LI Y G A +L M GL
Sbjct: 493 RQVFDEMLN-------SGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 95/215 (44%), Gaps = 11/215 (5%)
Query: 4 TSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXX 63
T + ++ +P +A V+ + ++G P++ +Y TL
Sbjct: 49 TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108
Query: 64 XXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTG 123
G D+ ++A+I + G + +A+ +M G+ P TY+ L+ + G
Sbjct: 109 S----GTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 124 EFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLP 183
+ ++ L D M+++ D P + T+N L+ +C + EA +++ M E G+
Sbjct: 165 KPERSSELLDLMLEEGNVDV----GPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVR 220
Query: 184 PDAVSYSTVISWFHRNRELGKAYELKVE---MDEK 215
PD V+Y+T+ + + + E +A VE M EK
Sbjct: 221 PDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEK 255
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 8/132 (6%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
YS ++ G + +A +F+EMV++GV PD + YS+L E KA L + +I
Sbjct: 333 YSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI 392
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+S P VV + +I G+C G +AM + M + G+ P+ ++ T++ +
Sbjct: 393 VES--------RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGY 444
Query: 197 HRNRELGKAYEL 208
++ KA E+
Sbjct: 445 LEVKQPWKAEEV 456
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 104/236 (44%), Gaps = 26/236 (11%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
+ A + +M + G+ PT TY TL + + P+
Sbjct: 132 EDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVD-VGPNIRT 190
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
++ L+ ++ ++ EA ++ ++M GV PD TY+ + GE +A E++
Sbjct: 191 FNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA---ESEVV 247
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+K + P T ++ GYC GR + + +R M EM + + V ++++I+ F
Sbjct: 248 EKMVMK--EKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 197 HRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDL---SDVDTYTSVMNDYFAEG 249
VE+ ++D +DE +LMK+ +DV TY++VMN + + G
Sbjct: 306 -------------VEVMDRD--GIDEVL--TLMKECNVKADVITYSTVMNAWSSAG 344
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 95/215 (44%), Gaps = 11/215 (5%)
Query: 4 TSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXX 63
T + ++ +P +A V+ + ++G P++ +Y TL
Sbjct: 49 TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108
Query: 64 XXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTG 123
G D+ ++A+I + G + +A+ +M G+ P TY+ L+ + G
Sbjct: 109 S----GTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 124 EFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLP 183
+ ++ L D M+++ D P + T+N L+ +C + EA +++ M E G+
Sbjct: 165 KPERSSELLDLMLEEGNVDV----GPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVR 220
Query: 184 PDAVSYSTVISWFHRNRELGKAYELKVE---MDEK 215
PD V+Y+T+ + + + E +A VE M EK
Sbjct: 221 PDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEK 255
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 8/132 (6%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
YS ++ G + +A +F+EMV++GV PD + YS+L E KA L + +I
Sbjct: 358 YSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI 417
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+S P VV + +I G+C G +AM + M + G+ P+ ++ T++ +
Sbjct: 418 VES--------RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGY 469
Query: 197 HRNRELGKAYEL 208
++ KA E+
Sbjct: 470 LEVKQPWKAEEV 481
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 7/126 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
GI N +S L+ G ++ G +A+DLF +M++ G P+ TY+ L+ G +A
Sbjct: 242 GISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEA 301
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
F + ++ + G +P +V N +IH Y LGRF EA + + + L PD +
Sbjct: 302 FTVLSKVQSE-------GLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYT 354
Query: 189 YSTVIS 194
+++++S
Sbjct: 355 FASILS 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 8/166 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
EG P+ + ++ + G +SEA + M+ SG+ +S+L+ +GE K
Sbjct: 206 EGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQK 265
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L ++MIQ G SP +VTY +LI G+ LG EA +L + GL PD V
Sbjct: 266 AVDLFNKMIQ-------IGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIV 318
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLS 233
+ +I + R +A ++ ++++ + D+ T S++ L
Sbjct: 319 LCNLMIHTYTRLGRFEEARKVFTSLEKRKL-VPDQYTFASILSSLC 363
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 101/234 (43%), Gaps = 17/234 (7%)
Query: 11 FHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGI 70
F +P KA ++ +MI G +P + TY +L EG+
Sbjct: 258 FRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQS----EGL 313
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFH 130
PD + +I + GR EA +F + + ++PD+YT++ ++ + L+G+F
Sbjct: 314 APDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKF----- 368
Query: 131 LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYS 190
+++ + T F +VT N L + + +G A+ +L M+ D +Y+
Sbjct: 369 ---DLVPRITHGIGTDFD--LVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYT 423
Query: 191 TVISWFHRNRELGKAYEL-KVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMN 243
+S R A ++ K+ + EK LD + +++ L ++ Y + ++
Sbjct: 424 VYLSALCRGGAPRAAIKMYKIIIKEKK--HLDAHFHSAIIDSLIELGKYNTAVH 475
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 67/150 (44%), Gaps = 7/150 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
E L D Y +++ GL Q+G L +ALD M G P + Y+ L+ + K
Sbjct: 848 ERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEK 907
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
+M +S P VVTY A+I GY LG+ EA R M E G PD
Sbjct: 908 VLETCQKMEGESC-------EPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFK 960
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDI 217
+YS I+ + + A +L EM +K I
Sbjct: 961 TYSKFINCLCQACKSEDALKLLSEMLDKGI 990
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 7/129 (5%)
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFH 130
L D+N Y +I G +Q +S+AL+ F + +SG P TY+ +M +F K +
Sbjct: 395 LDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCN 454
Query: 131 LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYS 190
L +EMI+ G P V A++ G+ R EA + M E G+ P SYS
Sbjct: 455 LFNEMIE-------NGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYS 507
Query: 191 TVISWFHRN 199
+ R+
Sbjct: 508 IFVKELCRS 516
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 80/207 (38%), Gaps = 15/207 (7%)
Query: 16 PDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNN 75
P +A + + +M++ G+ P VD L GI+P
Sbjct: 154 PSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGF----GIVPSAK 209
Query: 76 GYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEM 135
YS L+ G + S A +F EM+ + D Y+ L+D +G+ + + EM
Sbjct: 210 TYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEM 269
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISW 195
G P ++ IH YC G A +L M L P+ +++ +I
Sbjct: 270 GN-------LGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKT 322
Query: 196 FHRNRELGKAYELKVEMDEK----DIW 218
+N ++ AY L EM +K D W
Sbjct: 323 LCKNEKVDDAYLLLDEMIQKGANPDTW 349
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 13/137 (9%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G PD Y++++ ++ A L M R+ LPD +TY++++ G F +
Sbjct: 342 KGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDR 401
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCF-LGRFVEAMGILRGMAEMGLPPDA 186
A + + M ++ F P V TY +IHG G+ EA M + G+PP
Sbjct: 402 ATEIWEGMSERK-------FYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPP-- 452
Query: 187 VSYSTVISWFHRNRELG 203
YST + RNR +G
Sbjct: 453 --YSTTVEML-RNRLVG 466
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 76 GYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEM 135
Y+AL+ L + G + +F+EM G+ PD Y++++ + G+ A+ + D M
Sbjct: 245 AYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRM 304
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISW 195
+ L P V T+N +I C + +A +L M + G PD +Y++++++
Sbjct: 305 KRYDLV-------PNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAY 357
Query: 196 FHRNRELGKAYELKVEMDE 214
+ E+ +A +L MD
Sbjct: 358 HCDHCEVNRATKLLSRMDR 376
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 7/150 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+ PD ++ I G + A + M R ++P+ YT++ ++ T + A
Sbjct: 273 GLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDA 332
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+ L DEMIQK G +P TYN+++ +C A +L M PD +
Sbjct: 333 YLLLDEMIQK-------GANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHT 385
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIW 218
Y+ V+ R +A E+ M E+ +
Sbjct: 386 YNMVLKLLIRIGRFDRATEIWEGMSERKFY 415
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
GI PD Y+ +I L ++G + + L +F E+ ++G PD +++ L++ F +
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG 247
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+ D M K+L SP + +YN+ + G +F +A+ ++ M G+ PD +
Sbjct: 248 DRIWDLMKSKNL-------SPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHT 300
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEK 215
Y+ +I+ + + L + + EM EK
Sbjct: 301 YNALITAYRVDNNLEEVMKCYNEMKEK 327
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+ + P+ Y++ + GL + + ++AL+L M G+ PD +TY+ L+ R+ +
Sbjct: 257 KNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEE 316
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGI 173
++EM +K G +P VTY LI C G A+ +
Sbjct: 317 VMKCYNEMKEK-------GLTPDTVTYCMLIPLLCKKGDLDRAVEV 355
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
EGI PD + Y+ALI L E + + EM G+ PD TY +L+ G+ +
Sbjct: 292 EGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDR 351
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFV 151
A + +E I+ L + P V
Sbjct: 352 AVEVSEEAIKHKLLSRPNMYKPVV 375
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G P N ++ ++ + G L EA ++ + M G+ PD YTY++++ G +
Sbjct: 401 KGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDE 460
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + E +K SP VTY+ALI GYC + + EA+ +L M G+ P+A
Sbjct: 461 AQEILAEAKKKH-----KKLSP--VTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNAD 513
Query: 188 SYSTVISWF 196
Y+ +I F
Sbjct: 514 EYNKLIQSF 522
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 70/152 (46%), Gaps = 12/152 (7%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVL--PDEYTYSLLMDT-CR--LTGEFS 126
PD Y+ +I L + G +A L +M G PD YTY++L+ + CR +
Sbjct: 198 PDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCR 257
Query: 127 KAFHLH----DEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGL 182
KA + M ++ L GF P VVTYN LI G C R A+ + M G
Sbjct: 258 KAIRRRMWEANRMFREML---FRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGC 314
Query: 183 PPDAVSYSTVISWFHRNRELGKAYELKVEMDE 214
P+ V+Y++ I ++ E+ A E+ M +
Sbjct: 315 VPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKK 346
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G +PD Y+ LI G + R+ AL+LF +M G +P++ TY+ + +T E
Sbjct: 277 RGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEG 336
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + M K L V G S TY LIH R EA ++ M E GL P
Sbjct: 337 AIEMMRTM--KKLGHGVPGSS----TYTPLIHALVETRRAAEARDLVVEMVEAGLVPREY 390
Query: 188 SYSTV 192
+Y V
Sbjct: 391 TYKLV 395
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 65/149 (43%), Gaps = 16/149 (10%)
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
+ L+ L ++G + EAL F M PD Y Y+ +++ G F KA L D+M
Sbjct: 169 TCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQM-- 226
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLG-----------RFVEAMGILRGMAEMGLPPDA 186
L F + P TY LI YC G R EA + R M G PD
Sbjct: 227 -QLPGF--RYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDV 283
Query: 187 VSYSTVISWFHRNRELGKAYELKVEMDEK 215
V+Y+ +I + +G+A EL +M K
Sbjct: 284 VTYNCLIDGCCKTNRIGRALELFEDMKTK 312
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 9/154 (5%)
Query: 90 LSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVTGFSP 149
+ +A+++ EM + G PDEY + L+D G A L ++M + F
Sbjct: 199 VKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR--------FPV 250
Query: 150 FVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELK 209
+ + +L++G+C +G+ +EA +L M E G PD V Y+ ++S + ++ AY+L
Sbjct: 251 NLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLL 310
Query: 210 VEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMN 243
+M + + + N L++ L VD M
Sbjct: 311 RDMRRRG-FEPNANCYTVLIQALCKVDRMEEAMK 343
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 22/183 (12%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD + L+ L + G + +A LF +M + Y SLL CR+ G+ +A
Sbjct: 213 GFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRV-GKMMEA 271
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
++ +M + GF P +V Y L+ GY G+ +A +LR M G P+A
Sbjct: 272 KYVLVQMNE-------AGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANC 324
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAE 248
Y+ +I + + +A ++ VEM+ + +DV TYT++++ +
Sbjct: 325 YTVLIQALCKVDRMEEAMKVFVEMERYECE--------------ADVVTYTALVSGFCKW 370
Query: 249 GSI 251
G I
Sbjct: 371 GKI 373
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 102/253 (40%), Gaps = 31/253 (12%)
Query: 3 FTSEIGLMFHWLKPDK---ASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXX 59
FTS L++ W + K A V QM ++G P + Y L
Sbjct: 255 FTS---LLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLR 311
Query: 60 XXXXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTC 119
G P+ N Y+ LI L + R+ EA+ +F EM R D TY+ L+
Sbjct: 312 DMRR----RGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGF 367
Query: 120 RLTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAE 179
G+ K + + D+MI+K G P +TY ++ + F E + ++ M +
Sbjct: 368 CKWGKIDKCYIVLDDMIKK-------GLMPSELTYMHIMVAHEKKESFEECLELMEKMRQ 420
Query: 180 MGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYT 239
+ PD Y+ VI + E+ +A L EM+E + VDT+
Sbjct: 421 IEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLS--------------PGVDTFV 466
Query: 240 SVMNDYFAEGSIL 252
++N ++G +L
Sbjct: 467 IMINGLASQGCLL 479
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 79/201 (39%), Gaps = 11/201 (5%)
Query: 16 PDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNN 75
PD A + M+ +G P + T L +G +
Sbjct: 343 PDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSS----KGYFSELQ 398
Query: 76 GYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEM 135
YS +I L + GR+ E+ +EM + G+ PD Y+ L++ C A L DEM
Sbjct: 399 SYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEM 458
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISW 195
FV G + TYN LI G E++ + M E G+ PD Y ++I
Sbjct: 459 -------FVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEG 511
Query: 196 FHRNRELGKAYELKVEMDEKD 216
+ ++ A E+ + E+D
Sbjct: 512 LCKETKIEAAMEVFRKCMERD 532
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 3/137 (2%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+ PD Y+++I G G++ +A L +EM + + + TYS +++ +G+ +A
Sbjct: 195 GLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERA 254
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L EM ++ + SP VTY +I +C R EA+ +L M G P+ V+
Sbjct: 255 LELLAEMEKEDGGGLI---SPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVT 311
Query: 189 YSTVISWFHRNRELGKA 205
+I N E KA
Sbjct: 312 ACVLIQGVLENDEDVKA 328
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 8/138 (5%)
Query: 80 LILGLYQQGRLS-EALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQK 138
++L L Q L+ EAL + R+ V D Y+L++ G+ + A L EM
Sbjct: 135 IVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEM--- 191
Query: 139 SLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHR 198
D V G P V+TY ++I+GYC G+ +A + + M++ ++V+YS ++ +
Sbjct: 192 ---DCV-GLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCK 247
Query: 199 NRELGKAYELKVEMDEKD 216
+ ++ +A EL EM+++D
Sbjct: 248 SGDMERALELLAEMEKED 265
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 12/142 (8%)
Query: 76 GYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEM 135
Y+A+I G +G EAL++ R MV SG+ DE+TY ++ C G +H +
Sbjct: 253 AYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV 312
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISW 195
+++ DF F N+L+ Y G+F EA I M D VS++ ++S
Sbjct: 313 LRRE--DFSFHFD------NSLVSLYYKCGKFDEARAIFEKMP----AKDLVSWNALLSG 360
Query: 196 FHRNRELGKAYELKVEMDEKDI 217
+ + +G+A + EM EK+I
Sbjct: 361 YVSSGHIGEAKLIFKEMKEKNI 382
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 73 DNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLH 132
D+ ++ALI L Q G +EA+D++ EM++ G+ PD T ++ C G +
Sbjct: 482 DSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYF 541
Query: 133 DEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTV 192
D M + V P Y LI C G+F +A ++ + P A + +
Sbjct: 542 DSM------ETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLP---FKPTAEIWEAL 592
Query: 193 ISW--FHRNRELG 203
+S H N ELG
Sbjct: 593 LSGCRVHGNMELG 605
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 7/148 (4%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF 129
IL + Y+ ++ L ++ + +DL+ EMV GV P+E+TY+L++ + G +A
Sbjct: 254 ILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEAL 313
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
EM KSL GF P VTY+++I G + +A+G+ M G+ P +
Sbjct: 314 KAFGEM--KSL-----GFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTC 366
Query: 190 STVISWFHRNRELGKAYELKVEMDEKDI 217
+T++S +++ KA L +M+ I
Sbjct: 367 ATMLSLYYKTENYPKALSLFADMERNKI 394
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 11/183 (6%)
Query: 1 MAFTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXX 60
+ + + I M K AS++Y +M SGV ++ TY T+
Sbjct: 775 VGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSN 834
Query: 61 XXXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCR 120
G+ D Y+ +I+ + G++SEAL LF EM + G+ P +Y++++ C
Sbjct: 835 ARRS----GLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKIC- 889
Query: 121 LTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEM 180
S+ H DE++Q + G + TY LI Y +F EA + + E
Sbjct: 890 ---ATSRLHHEVDELLQAMERN---GRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEK 943
Query: 181 GLP 183
G+P
Sbjct: 944 GIP 946
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 7/141 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
E P + ++I + G L +A LF E G P T S+L++ G+ +
Sbjct: 698 ESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHRE 757
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A H+ ++K++ G YN LI G+ A I M G+P
Sbjct: 758 AEHISRTCLEKNIELDTVG-------YNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQ 810
Query: 188 SYSTVISWFHRNRELGKAYEL 208
+Y+T+IS + R +L KA E+
Sbjct: 811 TYNTMISVYGRGLQLDKAIEI 831
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
EG+ P+ Y+ ++ +QG EAL F EM G +P+E TYS ++ G++ K
Sbjct: 287 EGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEK 346
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L+++M + G P T ++ Y + +A+ + M +P D V
Sbjct: 347 AIGLYEDMRSQ-------GIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEV 399
Query: 188 SYSTVISWFHR 198
+I + +
Sbjct: 400 IRGLIIRIYGK 410
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 14/166 (8%)
Query: 71 LPDNN--GYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
+P+ N +SAL+ G G L +L LF EM R G+ P+E+T+S + C L K
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+H ++ GF V N+L+ Y GR EA + R + + L +S
Sbjct: 127 LQIHGFCLK-------IGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSL----IS 175
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWL-DENTRESLMKDLS 233
++ +I+ F KA + M E +I DE T SL+K S
Sbjct: 176 WNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACS 221
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 7/144 (4%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
PDN+ Y LI G + R+ +A+ ++ EM +G +PD Y+ L+D + ++A L
Sbjct: 322 PDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQL 381
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
++M+Q+ G TYN LI G GR + + + G DA+++S
Sbjct: 382 FEKMVQE-------GVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSI 434
Query: 192 VISWFHRNRELGKAYELKVEMDEK 215
V R +L A +L EM+ +
Sbjct: 435 VGLQLCREGKLEGAVKLVEEMETR 458
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 7/144 (4%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
PD Y++LI L G+ +AL ++ E+ SG PD TY +L+ C + A +
Sbjct: 287 PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRI 346
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
+ EM GF P + YN L+ G + EA + M + G+ +Y+
Sbjct: 347 YGEMQ-------YNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNI 399
Query: 192 VISWFHRNRELGKAYELKVEMDEK 215
+I RN + L ++ +K
Sbjct: 400 LIDGLFRNGRAEAGFTLFCDLKKK 423
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 7/132 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G +PD Y+ L+ G + +++EA LF +MV+ GV +TY++L+D G
Sbjct: 353 NGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEA 412
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
F L ++ +K FV +T++ + C G+ A+ ++ M G D V
Sbjct: 413 GFTLFCDLKKKG--QFVDA-----ITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLV 465
Query: 188 SYSTVISWFHRN 199
+ S+++ FH+
Sbjct: 466 TISSLLIGFHKQ 477
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 77 YSALILGLYQQGRLSEALDLFREMV-RSGVL-----PDEYTYSLLMDTCRLTGEFSKAFH 130
Y+ I G G L AL LF+EM RS V PD TY+ L+ L G+ A
Sbjct: 251 YNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALI 310
Query: 131 LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYS 190
+ DE+ V+G P TY LI G C R +AM I M G PD + Y+
Sbjct: 311 VWDELK-------VSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYN 363
Query: 191 TVISWFHRNRELGKAYELKVEMDEKDI 217
++ + R++ +A +L +M ++ +
Sbjct: 364 CLLDGTLKARKVTEACQLFEKMVQEGV 390
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 75 NGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDE 134
NG+ L G + EA +++++ S PD +Y +++ G+ KA L+
Sbjct: 255 NGWCVL-------GNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRA 307
Query: 135 MIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
M + T +P V N +I CF R EA+ + R ++E G P+ V+Y++++
Sbjct: 308 M-------WDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLK 360
Query: 195 WFHRNRELGKAYELKVEMDEK 215
+ R K +EL EM+ K
Sbjct: 361 HLCKIRRTEKVWELVEEMELK 381
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 5/145 (3%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
G PD+ S++I L GR EA F + SG +PDE T ++++ RL S
Sbjct: 84 RGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVII--ARLLYSRSP 141
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
L + L F F P + YN L++ C + R ++A ++ M G PD V
Sbjct: 142 VSTLG---VIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVV 198
Query: 188 SYSTVISWFHRNRELGKAYELKVEM 212
+++T+I + REL A+++ EM
Sbjct: 199 TFTTLIGGYCEIRELEVAHKVFDEM 223
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 13/149 (8%)
Query: 70 ILPDNN------GYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTG 123
++P+N Y+A+I GL++ + EA+ +F ++ ++ V D TY++++D +T
Sbjct: 509 VMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTN 568
Query: 124 EFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLP 183
+ A D++I S FV Y A + G C G +A L +A+ G
Sbjct: 569 KVDMAKKFWDDVIWPS-----GRHDAFV--YAAFLKGLCQSGYLSDACHFLYDLADSGAI 621
Query: 184 PDAVSYSTVISWFHRNRELGKAYELKVEM 212
P+ V Y+TVI+ R+ +AY++ EM
Sbjct: 622 PNVVCYNTVIAECSRSGLKREAYQILEEM 650
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ P Y+A+I GL + G A L E P EYTY LLM++ + K
Sbjct: 336 KGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGK 395
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A ++ + M++K D YN + G C + E + +L M + PD
Sbjct: 396 ARNVLELMLRKEGADRTR-------IYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEY 448
Query: 188 SYSTVIS 194
+ +TVI+
Sbjct: 449 TLNTVIN 455
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 7/145 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ PD Y++LI + + +A L +M PD TY+ ++ L G+ K
Sbjct: 240 KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDK 299
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + EM + G P V YNA I +C R +A ++ M + GL P+A
Sbjct: 300 AREVLKEMKE-------YGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNAT 352
Query: 188 SYSTVISWFHRNRELGKAYELKVEM 212
+Y+ +LG+++EL V M
Sbjct: 353 TYNLFFRVLSLANDLGRSWELYVRM 377
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 103 SGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYC 162
G+ PD TY+ L+D E KA+ L D+M ++ T P V+TY +I G
Sbjct: 240 KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEET-------PDVITYTTVIGGLG 292
Query: 163 FLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEK 215
+G+ +A +L+ M E G PD +Y+ I F R LG A +L EM +K
Sbjct: 293 LIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKK 345
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 24/160 (15%)
Query: 73 DNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCR--LTGEFSKAFH 130
D +G +I + G E+LD FREM + G+ D + L+ R L EF K H
Sbjct: 81 DISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIH 140
Query: 131 L--------HDEMIQKSLTDFVTGFSPF--------------VVTYNALIHGYCFLGRFV 168
D I SL D + F +V +NA+I GY +
Sbjct: 141 CLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQAD 200
Query: 169 EAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYEL 208
EA+ +++ M +G+ PD ++++ +IS F R K E+
Sbjct: 201 EALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEI 240
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 7/134 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G +PD Y+ +I L ++G + AL L +M SG PD TY+ ++ G +A
Sbjct: 169 GGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQA 228
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+ +Q G PF++TY L+ C A+ +L MA G PD V+
Sbjct: 229 IRFWKDQLQ-------NGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVT 281
Query: 189 YSTVISWFHRNREL 202
Y++++++ R L
Sbjct: 282 YNSLVNYNCRRGNL 295
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 21/181 (11%)
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFH 130
+P S L+ GL + +L +A+ + R MV SG +PD TY++++ G A
Sbjct: 136 VPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALV 195
Query: 131 LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYS 190
L ++M ++G P V+TYN +I G +A+ + + G PP ++Y+
Sbjct: 196 LLEDM-------SLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYT 248
Query: 191 TVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEGS 250
++ R +A E+ +M + + D+ TY S++N G+
Sbjct: 249 VLVELVCRYCGSARAIEVLEDMAVEGCY--------------PDIVTYNSLVNYNCRRGN 294
Query: 251 I 251
+
Sbjct: 295 L 295
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 83/211 (39%), Gaps = 42/211 (19%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMD-TCRLTGEFSK 127
G PD Y+ +I ++ G +A+ +++ +++G P TY++L++ CR G
Sbjct: 204 GSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARA 263
Query: 128 AFHLHDEMIQKSLTDFVT---------------------------GFSPFVVTYNALIHG 160
L D ++ D VT G VTYN L+H
Sbjct: 264 IEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHS 323
Query: 161 YCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDIWWL 220
C + E IL M + P ++Y+ +I+ + R L +A + +M E+
Sbjct: 324 LCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQ----- 378
Query: 221 DENTRESLMKDLSDVDTYTSVMNDYFAEGSI 251
K L D+ TY +V+ EG +
Sbjct: 379 ---------KCLPDIVTYNTVLGAMSKEGMV 400
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 13/209 (6%)
Query: 1 MAFTSEIGLMFHWLKPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXX 60
+ + + I MF + ++A + + + +G P + TY L
Sbjct: 210 ITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLED 269
Query: 61 XXXXXXXEGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCR 120
EG PD Y++L+ ++G L E + + ++ G+ + TY+ L+
Sbjct: 270 MAV----EGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLL---- 321
Query: 121 LTGEFSKAFHLHDEMIQKSLTD-FVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAE 179
S H + + +++ L + T + P V+TYN LI+G C A+ M E
Sbjct: 322 ----HSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLE 377
Query: 180 MGLPPDAVSYSTVISWFHRNRELGKAYEL 208
PD V+Y+TV+ + + A EL
Sbjct: 378 QKCLPDIVTYNTVLGAMSKEGMVDDAIEL 406
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 7/122 (5%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ LI GL + LS A+D F +M+ LPD TY+ ++ G SK + D +
Sbjct: 352 YNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVL------GAMSKEGMVDDAIE 405
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
L T P ++TYN++I G G +A+ + M + G+ PD ++ ++I F
Sbjct: 406 LLGLLKN-TCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGF 464
Query: 197 HR 198
R
Sbjct: 465 CR 466
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 73 DNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLH 132
D + ++ L G+L++A L M R +P + S L+ + KA +
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 133 DEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTV 192
M+ ++G P +TYN +I C G A+ +L M+ G PPD ++Y+TV
Sbjct: 163 RVMV-------MSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTV 215
Query: 193 I 193
I
Sbjct: 216 I 216
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+ LPD Y+ ++ + ++G + +A++L + + P TY+ ++D G K
Sbjct: 378 QKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKK 437
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L+ +M+ G P +T +LI+G+C EA +L+ + G
Sbjct: 438 ALELYHQMLD-------AGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGS 490
Query: 188 SYSTVISWFHRNRELGKAYEL 208
+Y VI + +E+ A E+
Sbjct: 491 TYRLVIQGLCKKKEIEMAIEV 511
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 26/171 (15%)
Query: 71 LPDNNGYS--ALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
+P NG S ++I G + GR +ALD+FREM V PD +T L++ C G +
Sbjct: 218 MPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQG 277
Query: 129 FHLHDEM------------------------IQKSLTDFVTGFSPFVVTYNALIHGYCFL 164
+H+ + I++ L F + +N++I G
Sbjct: 278 RWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANN 337
Query: 165 GRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEK 215
G AM + + GL PD+VS+ V++ + E+ +A E M EK
Sbjct: 338 GFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEK 388
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ DN YS +I + ++A++ F M ++G++PDE TYS ++D +G+ +
Sbjct: 215 DGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEE 274
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
L++ + TG+ P + ++ L + G + +L+ M M + P+ V
Sbjct: 275 VLSLYERAV-------ATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVV 327
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDE 214
Y+T++ R + G A L EM E
Sbjct: 328 VYNTLLEAMGRAGKPGLARSLFNEMLE 354
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
E P+ Y+ L+ G + L EA ++ +M+ G+ PD ++++++ + + S
Sbjct: 292 ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSD 351
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L M K G P V +Y +I +C A+ M + GL PDA
Sbjct: 352 AIKLFHVMKSK-------GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAA 404
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEK 215
Y+ +I+ F ++L YEL EM EK
Sbjct: 405 VYTCLITGFGTQKKLDTVYELLKEMQEK 432
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 70/173 (40%), Gaps = 11/173 (6%)
Query: 26 MIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYSALILGLY 85
M+DSG+ P Y L +G PD Y+ALI +
Sbjct: 394 MVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE----KGHPPDGKTYNALIKLMA 449
Query: 86 QQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVT 145
Q A ++ +M+++ + P +T++++M + + + + +EMI+K
Sbjct: 450 NQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKK------- 502
Query: 146 GFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHR 198
G P +Y LI G G+ EA L M + G+ + Y+ + FHR
Sbjct: 503 GICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHR 555
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 66/149 (44%), Gaps = 7/149 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD Y LI L + R EA LF EMV G+ P TY+ ++D GE +
Sbjct: 609 GHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRG 668
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
M + +P V+TY +LIHG C GR EA+ M P+ ++
Sbjct: 669 LSCIVRMYEDEK-------NPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRIT 721
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDI 217
+ +I + G+A EM+EK++
Sbjct: 722 FMALIQGLCKCGWSGEALVYFREMEEKEM 750
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 7/151 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
EG L +A I GL + + L+LFR++ +G PD Y +L+ +
Sbjct: 573 EGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTME 632
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L +EM+ K G P V TYN++I G+C G + + M E PD +
Sbjct: 633 ADILFNEMVSK-------GLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVI 685
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIW 218
+Y+++I + +A EM KD +
Sbjct: 686 TYTSLIHGLCASGRPSEAIFRWNEMKGKDCY 716
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 7/140 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G++P Y+ +I G+ ++GR E+L L EM +GV P ++T + + +F A
Sbjct: 469 GLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGA 528
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L +M GF P++ L+ C GR V+A L +A G V+
Sbjct: 529 LDLLKKM-------RFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVA 581
Query: 189 YSTVISWFHRNRELGKAYEL 208
+ I +N + + EL
Sbjct: 582 STAAIDGLIKNEGVDRGLEL 601
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ D S ++ ++G L EA + F E+ G P TY+ L+ G +++
Sbjct: 275 KGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTE 334
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + EM + S VTYN L+ Y G EA G++ M + G+ P+A+
Sbjct: 335 ALSVLKEMEENSC-------PADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAI 387
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDE 214
+Y+TVI + + + +A +L M E
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKE 414
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 29/157 (18%)
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSKAF 129
L D Y+ ++ + G+ +A+DLF M G P TY++++D ++ + K
Sbjct: 207 LLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKIL 266
Query: 130 HLHDEMIQKSLT--DFVT--------------------------GFSPFVVTYNALIHGY 161
+ DEM K L +F G+ P VTYNAL+ +
Sbjct: 267 GVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVF 326
Query: 162 CFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHR 198
G + EA+ +L+ M E P D+V+Y+ +++ + R
Sbjct: 327 GKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVR 363
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ PD Y++L+ ++G +A ++ + + +S + PD +Y+ ++ G +
Sbjct: 660 DGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQE 719
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A + EM ++ G P + TYN + GY +G F E ++ MA+ P+ +
Sbjct: 720 AVRMLSEMTER-------GIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNEL 772
Query: 188 SYSTVISWFHRNRELGKAYELKVEM-------DEKDIWWLDENTRESL 228
++ V+ + R + +A + ++ D++ I L RE+L
Sbjct: 773 TFKMVVDGYCRAGKYSEAMDFVSKIKTFDPCFDDQSIQRLALRVRENL 820
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 13/134 (9%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G++P+ Y+ +I + G+ EAL LF M +G +P+ TY+ ++ L G+ S+
Sbjct: 380 KGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLS---LLGKKSR 436
Query: 128 AFHLHDEMIQKSLTDFVT-GFSPFVVTYNALIH--GYCFLGRFVEAMGILRGMAEMGLPP 184
+ +EMI K L D + G SP T+N ++ G + +FV + R M G P
Sbjct: 437 S----NEMI-KMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNR--VFREMKSCGFEP 489
Query: 185 DAVSYSTVISWFHR 198
D +++T+IS + R
Sbjct: 490 DRDTFNTLISAYGR 503
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G PD +++++ + +A + + G+ PD TY+ LMD GE KA
Sbjct: 626 GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKA 685
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
E I K+L + P +V+YN +I G+C G EA+ +L M E G+ P +
Sbjct: 686 -----EEILKTLEK--SQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFT 738
Query: 189 YSTVISWF 196
Y+T +S +
Sbjct: 739 YNTFVSGY 746
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 7/144 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G P Y+AL+ + G +EAL + +EM + D TY+ L+ G FSK
Sbjct: 311 GYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAG-FSKE 369
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
EM+ K G P +TY +I Y G+ EA+ + M E G P+ +
Sbjct: 370 AAGVIEMMTKK------GVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCT 423
Query: 189 YSTVISWFHRNRELGKAYELKVEM 212
Y+ V+S + + ++ +M
Sbjct: 424 YNAVLSLLGKKSRSNEMIKMLCDM 447
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 86/228 (37%), Gaps = 34/228 (14%)
Query: 19 ASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYS 78
ASK+Y +M +G V TY L +G P YS
Sbjct: 510 ASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKS----KGFKPTETSYS 565
Query: 79 ALILGLYQQGRLSEALDLFREMVRSGVLPDEY----TYSLLMDTCRLTGEFSKAFHLH-- 132
L+L Y +G ++ ++ G + + T L CR +AF L
Sbjct: 566 -LMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKK 624
Query: 133 -----DEMIQKSLTDFVT------------------GFSPFVVTYNALIHGYCFLGRFVE 169
D +I S+ T G SP +VTYN+L+ Y G +
Sbjct: 625 HGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWK 684
Query: 170 AMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDI 217
A IL+ + + L PD VSY+TVI F R + +A + EM E+ I
Sbjct: 685 AEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGI 732
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 69/184 (37%), Gaps = 11/184 (5%)
Query: 15 KPDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDN 74
K D+A K++ M ++G P TY + G P+
Sbjct: 401 KEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKS----NGCSPNR 456
Query: 75 NGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDE 134
++ ++ +G +FREM G PD T++ L+ G A ++ E
Sbjct: 457 ATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGE 516
Query: 135 MIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
M + GF+ V TYNAL++ G + ++ M G P SYS ++
Sbjct: 517 MTR-------AGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQ 569
Query: 195 WFHR 198
+ +
Sbjct: 570 CYAK 573
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 8/146 (5%)
Query: 68 EGILP-DNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFS 126
+G +P D+ Y+ +I G + G + E + +EMV SG PD +YS L++ TG +
Sbjct: 248 KGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRIN 307
Query: 127 KAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
+ + D + K G P YNA+I + F E+M R M + P+
Sbjct: 308 DSVEIFDNIKHK-------GNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNL 360
Query: 187 VSYSTVISWFHRNRELGKAYELKVEM 212
+YS ++S + R++ A E+ EM
Sbjct: 361 ETYSKLVSGLIKGRKVSDALEIFEEM 386
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 26/151 (17%)
Query: 70 ILPDNN--GYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
++P+ N ++ LI G Q G A+ + EM+ G+ P+EYT + ++ C +G
Sbjct: 252 LMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGS 311
Query: 128 AFHLH----------DEMIQKSLTDF----------VTGFSPF----VVTYNALIHGYCF 163
+H D I +L D T FS ++++ A+I G+
Sbjct: 312 GIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAV 371
Query: 164 LGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
GRF +A+ R M G PD V + V++
Sbjct: 372 HGRFHQAIQCFRQMMYSGEKPDEVVFLAVLT 402
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
E P+ Y+ L+ G + L EA ++ +M+ G+ PD ++++++ + + S
Sbjct: 291 ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSD 350
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L M K G P V +Y +I +C A+ M + GL PDA
Sbjct: 351 AIKLFHVMKSK-------GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAA 403
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEK 215
Y+ +I+ F ++L YEL EM EK
Sbjct: 404 VYTCLITGFGTQKKLDTVYELLKEMQEK 431
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 69/173 (39%), Gaps = 11/173 (6%)
Query: 26 MIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYSALILGLY 85
M+DSG+ P Y L +G PD Y+ALI +
Sbjct: 393 MVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE----KGHPPDGKTYNALIKLMA 448
Query: 86 QQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVT 145
Q ++ +M+++ + P +T++++M + + + + DEMI+K
Sbjct: 449 NQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKK------- 501
Query: 146 GFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHR 198
G P +Y LI G G+ EA L M + G+ + Y+ + FHR
Sbjct: 502 GICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHR 554
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 80/200 (40%), Gaps = 7/200 (3%)
Query: 16 PDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNN 75
PDKA K+Y + D +P Y + + +
Sbjct: 46 PDKALKIYANVSDHSASPVSSRY--AQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEP 103
Query: 76 GYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEM 135
YS LI Q + A+ F +M + G +++ L++ C + F K L DE+
Sbjct: 104 FYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEI 163
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISW 195
Q+ P ++Y LI YC G +A+ I+R M G+ ++++T++S
Sbjct: 164 PQR-----YNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSS 218
Query: 196 FHRNRELGKAYELKVEMDEK 215
++ EL A L EM +K
Sbjct: 219 LYKKGELEVADNLWNEMVKK 238
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 12/123 (9%)
Query: 76 GYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSL-LMDTCRLTGEFSKAFHLHDE 134
++ ++ LY++G L A +L+ EMV+ G D Y++ +M + + E K L +E
Sbjct: 211 AFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVK--ELIEE 268
Query: 135 MIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
M G P ++YN L+ YC G EA + G+ P+A ++ T+I
Sbjct: 269 MSS-------MGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLI- 320
Query: 195 WFH 197
FH
Sbjct: 321 -FH 322
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
E P+ Y+ L+ G + L EA ++ +M+ G+ PD ++++++ + + S
Sbjct: 292 ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSD 351
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L M K G P V +Y +I +C A+ M + GL PDA
Sbjct: 352 AIKLFHVMKSK-------GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAA 404
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEK 215
Y+ +I+ F ++L YEL EM EK
Sbjct: 405 VYTCLITGFGTQKKLDTVYELLKEMQEK 432
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 69/173 (39%), Gaps = 11/173 (6%)
Query: 26 MIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYSALILGLY 85
M+DSG+ P Y L +G PD Y+ALI +
Sbjct: 394 MVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE----KGHPPDGKTYNALIKLMA 449
Query: 86 QQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVT 145
Q ++ +M+++ + P +T++++M + + + + DEMI+K
Sbjct: 450 NQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKK------- 502
Query: 146 GFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHR 198
G P +Y LI G G+ EA L M + G+ + Y+ + FHR
Sbjct: 503 GICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHR 555
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 7/149 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI P+++ + +I G Y + + E + M GV TY++ + + + +
Sbjct: 216 KGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKE 275
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L D M+ G P VTY+ LIHG+C F EA + + M G PD+
Sbjct: 276 AKALLDGMLS-------AGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSE 328
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKD 216
Y T+I + + + A L E EK+
Sbjct: 329 CYFTLIYYLCKGGDFETALSLCKESMEKN 357
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 83/225 (36%), Gaps = 35/225 (15%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
+KA KV+ M+ GV + TY +L I PD
Sbjct: 264 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSD-------IQPDVVS 316
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ LI + R EAL +F EM+ +GV P Y++L+D ++G +A + M
Sbjct: 317 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 376
Query: 137 QKSL-----------------TDF-----------VTGFSPFVVTYNALIHGYCFLGRFV 168
+ + +D V GF P +VTY LI GY
Sbjct: 377 RDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVE 436
Query: 169 EAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMD 213
+ M + M G+ + +T++ R + G A EM+
Sbjct: 437 KMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEME 481
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 7/149 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G P+ Y+AL+ + G+ + A +FR M SG P TY +++ T +F +A
Sbjct: 169 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 228
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+E+ + L + + P Y+ +I+ Y G + +A + M G+P V+
Sbjct: 229 ----EEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVT 284
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDI 217
Y++++S+ +E+ K Y+ +M DI
Sbjct: 285 YNSLMSFETSYKEVSKIYD---QMQRSDI 310
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 74/182 (40%), Gaps = 11/182 (6%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
+ A KV+ +M++ V P+V TY +L + I P+
Sbjct: 203 EAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIK----KRIRPNAVT 258
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
+ L+ GL +G +EA L +M G P Y +LM G +A L EM
Sbjct: 259 FGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMK 318
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
++ + P VV YN L++ C R EA +L M G P+A +Y +I F
Sbjct: 319 KRRI-------KPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGF 371
Query: 197 HR 198
R
Sbjct: 372 CR 373
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 9/147 (6%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTY-SLLMDTCRLTGEFSKAFH 130
P++ ++ LI G + A +F EM+ V P TY SL+ CR + KA
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCR-NDDMGKAKS 242
Query: 131 LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYS 190
L ++MI+K + P VT+ L+ G C G + EA ++ M G P V+Y
Sbjct: 243 LLEDMIKKRI-------RPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYG 295
Query: 191 TVISWFHRNRELGKAYELKVEMDEKDI 217
++S + + +A L EM ++ I
Sbjct: 296 ILMSDLGKRGRIDEAKLLLGEMKKRRI 322
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 7/146 (4%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF 129
+ P Y++LI L + + +A L +M++ + P+ T+ LLM GE+++A
Sbjct: 217 VQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAK 276
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
L +M + G P +V Y L+ GR EA +L M + + PD V Y
Sbjct: 277 KLMFDMEYR-------GCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIY 329
Query: 190 STVISWFHRNRELGKAYELKVEMDEK 215
+ +++ + +AY + EM K
Sbjct: 330 NILVNHLCTECRVPEAYRVLTEMQMK 355
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 11/143 (7%)
Query: 79 ALILGLYQQ----GRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDE 134
+L +GL Q G + +A+D+F ++ + + + L++ GE KA D
Sbjct: 117 SLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDG 176
Query: 135 MIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
L P V++N LI G+ + A + M EM + P V+Y+++I
Sbjct: 177 AKDMRL-------RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIG 229
Query: 195 WFHRNRELGKAYELKVEMDEKDI 217
+ RN ++GKA L +M +K I
Sbjct: 230 FLCRNDDMGKAKSLLEDMIKKRI 252
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 83/225 (36%), Gaps = 35/225 (15%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
+KA KV+ M+ GV + TY +L I PD
Sbjct: 271 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRS-------DIQPDVVS 323
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ LI + R EAL +F EM+ +GV P Y++L+D ++G +A + M
Sbjct: 324 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 383
Query: 137 QKSL-----------------TDF-----------VTGFSPFVVTYNALIHGYCFLGRFV 168
+ + +D V GF P +VTY LI GY
Sbjct: 384 RDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVE 443
Query: 169 EAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMD 213
+ M + M G+ + +T++ R + G A EM+
Sbjct: 444 KMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEME 488
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 7/149 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G P+ Y+AL+ + G+ + A +FR M SG P TY +++ T +F +A
Sbjct: 176 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 235
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+E+ + L + + P Y+ +I+ Y G + +A + M G+P V+
Sbjct: 236 ----EEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVT 291
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDI 217
Y++++S+ +E+ K Y+ +M DI
Sbjct: 292 YNSLMSFETSYKEVSKIYD---QMQRSDI 317
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 11/134 (8%)
Query: 73 DNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLH 132
D ++A+I+G Q G +EAL+LFREM+ SG PD T ++ C G + H
Sbjct: 457 DCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYF 516
Query: 133 DEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTV 192
M + DF G +P Y ++ G EA ++ EM + PD+V + ++
Sbjct: 517 SSMTR----DF--GVAPLRDHYTCMVDLLGRAGFLEEAKSMIE---EMPMQPDSVIWGSL 567
Query: 193 ISW--FHRNRELGK 204
++ HRN LGK
Sbjct: 568 LAACKVHRNITLGK 581
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 5/138 (3%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
++ALI G Q G EAL LF + R V P Y+++ ++ C E H ++
Sbjct: 354 WNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVL 413
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+ F +G + N+LI Y G E + R M E D VS++ +I F
Sbjct: 414 KHGFK-FQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER----DCVSWNAMIIGF 468
Query: 197 HRNRELGKAYELKVEMDE 214
+N +A EL EM E
Sbjct: 469 AQNGYGNEALELFREMLE 486
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 24/142 (16%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTC---------RLTGEFSK 127
++++I G Q G+ EAL+LFREM +GV P+ T ++ C R T F+
Sbjct: 356 WTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAV 415
Query: 128 AFHLHD---------EMIQK----SLTDFVTGFSPF--VVTYNALIHGYCFLGRFVEAMG 172
HL D +M K +L+ V P +V +N+L++G+ G+ E M
Sbjct: 416 RVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMS 475
Query: 173 ILRGMAEMGLPPDAVSYSTVIS 194
I + L PD +S+++++S
Sbjct: 476 IFESLMRTRLKPDFISFTSLLS 497
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 11/147 (7%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
GI D Y L+ GL R+ + L + M SGV P+ Y+ L+ G+ +A
Sbjct: 177 GIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRA 236
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L EM + P VT+N LI YC + +++M +L +G PD V+
Sbjct: 237 RSLMSEMKE-----------PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVT 285
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEK 215
+ V+ + +A E+ ++ K
Sbjct: 286 VTKVMEVLCNEGRVSEALEVLERVESK 312
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 13/135 (9%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLF-REMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
GI P +++ IL + + + A + F R+M+ SG+ D YTY +LM LT
Sbjct: 142 GIKPSLKVFNS-ILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGD 200
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
F L M +G +P V YN L+H C G+ A ++ M E P+ V
Sbjct: 201 GFKLLQIMK-------TSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDV 249
Query: 188 SYSTVISWFHRNREL 202
+++ +IS + ++L
Sbjct: 250 TFNILISAYCNEQKL 264
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 68/150 (45%), Gaps = 7/150 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
E + P S ++ L ++G + + + +M+ G +P L+ G+ +
Sbjct: 452 EKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEE 511
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
+ L ++M+ + G+ P T+NA+I G+C + + + + MAE G PD
Sbjct: 512 SLELINDMVTR-------GYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTE 564
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDI 217
SY+ ++ ++ KA+ L M EK I
Sbjct: 565 SYNPLLEELCVKGDIQKAWLLFSRMVEKSI 594
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 74/148 (50%), Gaps = 12/148 (8%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+ D ++L+ L ++ + A ++F ++ + + PD T+++L+ F KA
Sbjct: 234 GVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT-IKPDARTFNILIHG------FCKA 286
Query: 129 FHLHDEMIQKSLTDF--VTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
D +++ D VT F+P VVTY + + YC G F +L M E G P+
Sbjct: 287 RKFDD---ARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNV 343
Query: 187 VSYSTVISWFHRNRELGKAYELKVEMDE 214
V+Y+ V+ +++++ +A + +M E
Sbjct: 344 VTYTIVMHSLGKSKQVAEALGVYEKMKE 371
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF 129
I PD ++ LI G + + +A + M + PD TY+ ++ G+F +
Sbjct: 269 IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVN 328
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
+ +EM + G +P VVTY ++H + EA+G+ M E G PDA Y
Sbjct: 329 EMLEEMRE-------NGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFY 381
Query: 190 STVISWFHRNRELGKAYEL 208
S++I + A E+
Sbjct: 382 SSLIHILSKTGRFKDAAEI 400
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
PD Y++ + ++G ++ EM +G P+ TY+++M + + + ++A +
Sbjct: 306 PDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGV 365
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
+++M + G P Y++LIH GRF +A I M G+ D + Y+T
Sbjct: 366 YEKMKE-------DGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNT 418
Query: 192 VIS-WFHRNRE 201
+IS H +R+
Sbjct: 419 MISAALHHSRD 429
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 18/133 (13%)
Query: 95 DLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVTGFSPFVVTY 154
LFR+MV SG+ PD + + L+ L+ + A + +M V P TY
Sbjct: 274 SLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQM------SVVYDCEPNSFTY 327
Query: 155 NALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDE 214
+ LIHG C GR + A +L M G P+ SY+++++ A+ L E+D+
Sbjct: 328 DYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVN----------AFALSGEIDD 377
Query: 215 --KDIWWLDENTR 225
K +W + EN R
Sbjct: 378 AVKCLWEMIENGR 390
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 13/179 (7%)
Query: 22 VYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYSALI 81
++ QM+DSG+ P V L E P++ Y LI
Sbjct: 275 LFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCE---PNSFTYDYLI 331
Query: 82 LGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQK-SL 140
GL QGR A +L EM G +P+ +Y+ L++ L+GE A EMI+ +
Sbjct: 332 HGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRV 391
Query: 141 TDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRN 199
DF ++Y L+ C G++ EA +L + E L D SY +++ H++
Sbjct: 392 VDF--------ISYRTLVDESCRKGKYDEATRLLEMLREKQL-VDRDSYDKLVNVLHKD 441
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 63/140 (45%), Gaps = 2/140 (1%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMD-TCRLTGEFSKA 128
I PD N LI G +L EA L EM R G Y++++D C+L +
Sbjct: 241 IFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRK-KDP 299
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
F L E+ + L G T+N LI+ C + R EAM + M E G PDA +
Sbjct: 300 FKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAET 359
Query: 189 YSTVISWFHRNRELGKAYEL 208
Y +I ++ +G+ E+
Sbjct: 360 YLVLIRSLYQAARIGEGDEM 379
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 24/142 (16%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
++ LI G + R EA DLFR+M+R +LP++ T + ++ +C G +H MI
Sbjct: 280 WTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMI 339
Query: 137 QKSLTDFVTGFSPF------------------------VVTYNALIHGYCFLGRFVEAMG 172
+ + F+ F V++++++I+ + G F EA+
Sbjct: 340 RNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALD 399
Query: 173 ILRGMAEMGLPPDAVSYSTVIS 194
M + P++V++ +++S
Sbjct: 400 CFHKMKSQNVVPNSVTFVSLLS 421
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 77 YSALILGLYQQGRLSEALD----LFREMVRSG--VLPDEYTYSLLMDTCRLTGEFSKAFH 130
+ A+I G + RL A+ L R+ SG + P+ + Y+ L+ R GE K
Sbjct: 149 FCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAMRGFGEAEKILK 208
Query: 131 LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYS 190
+E G P +VTYN L+ Y G F++A+GIL E G P+ ++YS
Sbjct: 209 DMEE----------EGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYS 258
Query: 191 TVISWFHRNRELGKAYELKVEMDEK 215
T + + R + A E VE+ EK
Sbjct: 259 TALLVYRRMEDGMGALEFFVELREK 283
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G P Y AL+ L + EA ++ M++ G+ P+ Y Y+ + LTG+ +
Sbjct: 488 GEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASV--LTGQ--QK 543
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
F+L D ++++ + G P VVT+NA+I G G A M + P+ ++
Sbjct: 544 FNLLDTLLKEMASK---GIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEIT 600
Query: 189 YSTVISWFHRNRELGKAYELKVE 211
Y +I + + AYEL V+
Sbjct: 601 YEMLIEALANDAKPRLAYELHVK 623
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 28/172 (16%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
I PD Y+ LI GL +G +EA+ L E+ G+ PD T+++L+ G+F +
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEG 231
Query: 129 FHLHDEMIQK--------------------------SLTDFVTG--FSPFVVTYNALIHG 160
+ M++K SL D + G P V T+ A+I G
Sbjct: 232 EQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKG 291
Query: 161 YCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEM 212
+ G+ EA+ + + + G P +++++ + +L AYEL E+
Sbjct: 292 FVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEI 343
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 65/143 (45%), Gaps = 7/143 (4%)
Query: 76 GYSALILGLYQQ-GRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDE 134
G+ A I+ LY + G A +F EM +++ L++ C + +F + E
Sbjct: 107 GFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKE 166
Query: 135 MIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
+ K P V +YN LI G C G F EA+ ++ + GL PD ++++ ++
Sbjct: 167 LPGK------LSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLH 220
Query: 195 WFHRNRELGKAYELKVEMDEKDI 217
+ + + ++ M EK++
Sbjct: 221 ESYTKGKFEEGEQIWARMVEKNV 243
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 9/145 (6%)
Query: 68 EGILPDNNGYSALILGLYQQGRLS-EALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFS 126
+GI P N+ Y LI +Y +G L AL +M + G+ PDE T +++ + EF
Sbjct: 216 KGIKPINSTYGTLI-DVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQ 274
Query: 127 KAFHLHDEMIQKSLTDFVTGFSPFVV---TYNALIHGYCFLGRFVEAMGILRGMAEMGLP 183
KA +E +K D S + TYN +I Y G+ EA + M E G+
Sbjct: 275 KA----EEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIV 330
Query: 184 PDAVSYSTVISWFHRNRELGKAYEL 208
P V+++T+I + N +LG+ L
Sbjct: 331 PTTVTFNTMIHIYGNNGQLGEVTSL 355
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ +I + G++ EA + F+ M+ G++P T++ ++ G+ + L M
Sbjct: 301 YNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK 360
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+P TYN LI + A + M + GL PD VSY T++ F
Sbjct: 361 LHC--------APDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAF 412
Query: 197 HRNRELGKAYELKVEMDEKDIWWLDENTRESLMK 230
+ +A L EMD+ ++ +DE T+ +L +
Sbjct: 413 SIRHMVEEAEGLIAEMDDDNV-EIDEYTQSALTR 445
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+ PD Y+ L+ L + +M +G + D Y ++ + G+ + A
Sbjct: 535 GVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMA 594
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
++ EM++ ++ P VV Y LI+ + G +AM + M E G+P ++V
Sbjct: 595 EEVYKEMVEYNI-------EPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVI 647
Query: 189 YSTVISWFHR 198
Y+++I + +
Sbjct: 648 YNSLIKLYTK 657
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 77/192 (40%), Gaps = 14/192 (7%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
+KA +++ M+ GVTP TY TL +P
Sbjct: 522 EKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIP---- 577
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y A+I + G+L+ A ++++EMV + PD Y +L++ TG +A + M
Sbjct: 578 YCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMK 637
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLP---PDAVSYSTVI 193
+ G V YN+LI Y +G EA I R + + PD + + +I
Sbjct: 638 E-------AGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMI 690
Query: 194 SWFHRNRELGKA 205
+ + + KA
Sbjct: 691 NLYSERSMVRKA 702
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 58/104 (55%), Gaps = 7/104 (6%)
Query: 90 LSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVTGFSP 149
++EA ++REM + P++ +YS ++ G + L+DEM ++ G +P
Sbjct: 275 VTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKR-------GLAP 327
Query: 150 FVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVI 193
+ YN+L++ F EAM +++ + E GL PD+V+Y+++I
Sbjct: 328 GIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMI 371
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 23/154 (14%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTG-EFSKAFH 130
D ++ +I L + EAL + EMV++GV P+E+T+ L+ G EF K H
Sbjct: 188 ADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIH 247
Query: 131 LH--------DEMIQKSLTDFVTGFSPF--------------VVTYNALIHGYCFLGRFV 168
+ + +++ SL DF + FS V + +++ G+ R
Sbjct: 248 SNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAK 307
Query: 169 EAMGILRGMAEMGLPPDAVSYSTVISWFHRNREL 202
EA+G M +GL P+ +YS ++S R L
Sbjct: 308 EAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSL 341
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 70/142 (49%), Gaps = 13/142 (9%)
Query: 69 GILP--DNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFS 126
G++P DN ++A+I G EAL F +M++ V P+ YT+S ++ +
Sbjct: 396 GMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLI 455
Query: 127 KAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
+ +H +++ ++ + ++ N+L+ YC G +A I ++E P+
Sbjct: 456 EGLQIHGRVVKMNIVNDLS-------VQNSLVSMYCKCGNTNDAYKIFSCISE----PNI 504
Query: 187 VSYSTVISWFHRNRELGKAYEL 208
VSY+T+IS + N KA +L
Sbjct: 505 VSYNTMISGYSYNGFGKKALKL 526
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 9/138 (6%)
Query: 80 LILGLYQQGRLSEAL-DLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQK 138
+++GL+ +E + ++ +M + G PD TY+ L+ G+ K F + M+++
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLIS---FFGKH-KDFESVERMMEQ 606
Query: 139 SLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMA-EMGLPPDAVSYSTVISWFH 197
D G P V TY A+I YC +G EA+ + + M + P+ V Y+ +I+ F
Sbjct: 607 MRED---GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFS 663
Query: 198 RNRELGKAYELKVEMDEK 215
+ G+A LK EM K
Sbjct: 664 KLGNFGQALSLKEEMKMK 681
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 12/154 (7%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSG------VLPDEYTYSLLMDTCRLTG 123
I PD LI L + R+ EAL++F +M + D ++ L+D G
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 124 EFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLP 183
+A L +++ L + P VTYN LI GYC G+ A ++ M E +
Sbjct: 385 RLKEAEEL---LVRMKLEERCV---PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIK 438
Query: 184 PDAVSYSTVISWFHRNRELGKAYELKVEMDEKDI 217
P+ V+ +T++ R+ L A ++M+++ +
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV 472
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 7/169 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
EG PD+ Y+ LI + + +M G+ P TY ++D GE +
Sbjct: 575 EGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDE 634
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L +M + +P V YN LI+ + LG F +A+ + M + P+
Sbjct: 635 ALKLFKDM------GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVE 688
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVD 236
+Y+ + + + +L EM E+ ++ T E LM+ LS D
Sbjct: 689 TYNALFKCLNEKTQGETLLKLMDEMVEQSCEP-NQITMEILMERLSGSD 736
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 11/177 (6%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G +P + YSA+ L+++G+L E ++ M G P + Y + G+ +A
Sbjct: 293 GAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEA 352
Query: 129 FH-LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMA-EMGLPPDA 186
++ EM+Q P V YN LI G C G+ +EA+G L+ M+ ++ +
Sbjct: 353 VSVINKEMMQGHCL-------PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANE 405
Query: 187 VSYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVD-TYTSVM 242
+Y T++ R+ + +A ++ EM K + E T ++K L D+D Y +VM
Sbjct: 406 ETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVE-TYHMMIKGLCDMDRRYEAVM 461
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 8/117 (6%)
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRS-GVLPDEYTYSLLMDTCRLTGEFSKAF 129
LP Y+ LI GL G+ EA+ ++M + + +E TY L+D G+F +A
Sbjct: 366 LPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEAS 425
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
+ +EM+ KS P V TY+ +I G C + R EA+ L M + P++
Sbjct: 426 QVMEEMLIKS-------HFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPES 475
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 11/177 (6%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G +P + YSA+ L+++G+L E ++ M G P + Y + G+ +A
Sbjct: 293 GAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEA 352
Query: 129 FH-LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMA-EMGLPPDA 186
++ EM+Q P V YN LI G C G+ +EA+G L+ M+ ++ +
Sbjct: 353 VSVINKEMMQGHCL-------PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANE 405
Query: 187 VSYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVD-TYTSVM 242
+Y T++ R+ + +A ++ EM K + E T ++K L D+D Y +VM
Sbjct: 406 ETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVE-TYHMMIKGLCDMDRRYEAVM 461
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 8/117 (6%)
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRS-GVLPDEYTYSLLMDTCRLTGEFSKAF 129
LP Y+ LI GL G+ EA+ ++M + + +E TY L+D G+F +A
Sbjct: 366 LPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEAS 425
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDA 186
+ +EM+ KS P V TY+ +I G C + R EA+ L M + P++
Sbjct: 426 QVMEEMLIKS-------HFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPES 475
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 80/188 (42%), Gaps = 21/188 (11%)
Query: 18 KASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG- 76
+A +Y Q+++S PT DTY L + P G
Sbjct: 195 EAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQN----HHVSPKTIGV 250
Query: 77 --YSALILGLYQ-QGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF---H 130
Y+A I GL + +G EA+D+F+ M R P TY+L+++ L G+ SK++
Sbjct: 251 TVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN---LYGKASKSYMSWK 307
Query: 131 LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYS 190
L+ EM P + TY AL++ + G +A I + E GL PD Y+
Sbjct: 308 LYCEMRSHQC-------KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYN 360
Query: 191 TVISWFHR 198
++ + R
Sbjct: 361 ALMESYSR 368
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
P+ Y+AL+ ++G +A ++F ++ G+ PD Y Y+ LM++ +S+A +
Sbjct: 319 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMES------YSRAGYP 372
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
+ SL + G P +YN ++ Y G +A + M +G+ P S+
Sbjct: 373 YGAAEIFSLMQHM-GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHML 431
Query: 192 VISWFHRNRELGKAYELKVEMDEKDI 217
++S + + R++ K + EM E +
Sbjct: 432 LLSAYSKARDVTKCEAIVKEMSENGV 457
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 90/229 (39%), Gaps = 25/229 (10%)
Query: 21 KVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYSAL 80
K+YC+M P + TY L +G+ PD Y+AL
Sbjct: 307 KLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE----DGLEPDVYVYNAL 362
Query: 81 ILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSL 140
+ + G A ++F M G PD +Y++++D G S A + +EM +
Sbjct: 363 MESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKR--- 419
Query: 141 TDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNR 200
G +P + ++ L+ Y + I++ M+E G+ PD +++++ + R
Sbjct: 420 ----LGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLG 475
Query: 201 ELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEG 249
+ K ++ EM+ +D+ TY ++N Y G
Sbjct: 476 QFTKMEKILAEMENGPC--------------TADISTYNILINIYGKAG 510
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 13/201 (6%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
+KA +++ Q+ + G+ P V Y L G PD
Sbjct: 338 EKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHM----GCEPDRAS 393
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHD-EM 135
Y+ ++ + G S+A +F EM R G+ P ++ LL+ +SKA + E
Sbjct: 394 YNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSA------YSKARDVTKCEA 447
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISW 195
I K +++ G P N++++ Y LG+F + IL M D +Y+ +I+
Sbjct: 448 IVKEMSE--NGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINI 505
Query: 196 FHRNRELGKAYELKVEMDEKD 216
+ + L + EL VE+ EK+
Sbjct: 506 YGKAGFLERIEELFVELKEKN 526
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 15/119 (12%)
Query: 76 GYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEM 135
+S++ G ++G++ EA+ LF EM D+ +++++ C E A L D
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMP----YKDQVAWNVMITGCLKCKEMDSARELFDRF 235
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
+K VVT+NA+I GY G EA+GI + M + G PD V+ +++S
Sbjct: 236 TEKD-----------VVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLS 283
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 9/138 (6%)
Query: 80 LILGLYQQGRLSEAL-DLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQK 138
+++GL+ +E + ++ +M + G PD TY+ L+ G+ K F + M+++
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLIS---FFGKH-KDFESVERMMEQ 606
Query: 139 SLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMA-EMGLPPDAVSYSTVISWFH 197
D G P V TY A+I YC +G EA+ + + M + P+ V Y+ +I+ F
Sbjct: 607 MRED---GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFS 663
Query: 198 RNRELGKAYELKVEMDEK 215
+ G+A LK EM K
Sbjct: 664 KLGNFGQALSLKEEMKMK 681
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 12/154 (7%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSG------VLPDEYTYSLLMDTCRLTG 123
I PD LI L + R+ EAL++F +M + D ++ L+D G
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 124 EFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLP 183
+A L +++ L + P VTYN LI GYC G+ A ++ M E +
Sbjct: 385 RLKEAEEL---LVRMKLEERCV---PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIK 438
Query: 184 PDAVSYSTVISWFHRNRELGKAYELKVEMDEKDI 217
P+ V+ +T++ R+ L A ++M+++ +
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV 472
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREM-VRSGVLPDEYTYSLLMDTCRLTGEFS 126
+G+ P Y A+I G L EAL LF++M + S V P+ Y++L++ G F
Sbjct: 610 DGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFG 669
Query: 127 KAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEM 180
+A L +EM K + P V TYNAL + L + +L+ M EM
Sbjct: 670 QALSLKEEMKMKMV-------RPNVETYNAL---FKCLNEKTQGETLLKLMDEM 713
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 9/138 (6%)
Query: 80 LILGLYQQGRLSEAL-DLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQK 138
+++GL+ +E + ++ +M + G PD TY+ L+ G+ K F + M+++
Sbjct: 551 MLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLIS---FFGKH-KDFESVERMMEQ 606
Query: 139 SLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMA-EMGLPPDAVSYSTVISWFH 197
D G P V TY A+I YC +G EA+ + + M + P+ V Y+ +I+ F
Sbjct: 607 MRED---GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFS 663
Query: 198 RNRELGKAYELKVEMDEK 215
+ G+A LK EM K
Sbjct: 664 KLGNFGQALSLKEEMKMK 681
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 12/154 (7%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSG------VLPDEYTYSLLMDTCRLTG 123
I PD LI L + R+ EAL++F +M + D ++ L+D G
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 124 EFSKAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLP 183
+A L +++ L + +P VTYN LI GYC G+ A ++ M E +
Sbjct: 385 RLKEAEEL---LVRMKLEERC---APNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIK 438
Query: 184 PDAVSYSTVISWFHRNRELGKAYELKVEMDEKDI 217
P+ V+ +T++ R+ L A ++M+++ +
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV 472
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 80/188 (42%), Gaps = 21/188 (11%)
Query: 18 KASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG- 76
+A +Y Q+++S PT DTY L + P G
Sbjct: 173 EAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQN----HHVSPKTIGV 228
Query: 77 --YSALILGLYQ-QGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF---H 130
Y+A I GL + +G EA+D+F+ M R P TY+L+++ L G+ SK++
Sbjct: 229 TVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN---LYGKASKSYMSWK 285
Query: 131 LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYS 190
L+ EM P + TY AL++ + G +A I + E GL PD Y+
Sbjct: 286 LYCEMRSHQC-------KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYN 338
Query: 191 TVISWFHR 198
++ + R
Sbjct: 339 ALMESYSR 346
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
P+ Y+AL+ ++G +A ++F ++ G+ PD Y Y+ LM++ +S+A +
Sbjct: 297 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMES------YSRAGYP 350
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
+ SL + G P +YN ++ Y G +A + M +G+ P S+
Sbjct: 351 YGAAEIFSLMQHM-GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHML 409
Query: 192 VISWFHRNRELGKAYELKVEMDEKDI 217
++S + + R++ K + EM E +
Sbjct: 410 LLSAYSKARDVTKCEAIVKEMSENGV 435
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 90/229 (39%), Gaps = 25/229 (10%)
Query: 21 KVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNGYSAL 80
K+YC+M P + TY L +G+ PD Y+AL
Sbjct: 285 KLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE----DGLEPDVYVYNAL 340
Query: 81 ILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSL 140
+ + G A ++F M G PD +Y++++D G S A + +EM +
Sbjct: 341 MESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKR--- 397
Query: 141 TDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNR 200
G +P + ++ L+ Y + I++ M+E G+ PD +++++ + R
Sbjct: 398 ----LGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLG 453
Query: 201 ELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDYFAEG 249
+ K ++ EM+ +D+ TY ++N Y G
Sbjct: 454 QFTKMEKILAEMENGPC--------------TADISTYNILINIYGKAG 488
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 13/201 (6%)
Query: 17 DKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNNG 76
+KA +++ Q+ + G+ P V Y L G PD
Sbjct: 316 EKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHM----GCEPDRAS 371
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHD-EM 135
Y+ ++ + G S+A +F EM R G+ P ++ LL+ +SKA + E
Sbjct: 372 YNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSA------YSKARDVTKCEA 425
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISW 195
I K +++ G P N++++ Y LG+F + IL M D +Y+ +I+
Sbjct: 426 IVKEMSE--NGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINI 483
Query: 196 FHRNRELGKAYELKVEMDEKD 216
+ + L + EL VE+ EK+
Sbjct: 484 YGKAGFLERIEELFVELKEKN 504
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 7/157 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G++PD + +I + + EA+ +F+EM G P+ YTYS L+ G +
Sbjct: 218 GVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQG 277
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+ EM V G P Y LI R EA+ ++ M L PD ++
Sbjct: 278 LGFYKEMQ-------VKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLT 330
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTR 225
Y+TV++ R +A E+ E ++D + N R
Sbjct: 331 YNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYR 367
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 7/123 (5%)
Query: 90 LSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVTGFSP 149
L L ++M +GV+PD + ++++ E +A + EM + G P
Sbjct: 204 LHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMA-------LYGSEP 256
Query: 150 FVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELK 209
TY+ L+ G C GR + +G + M G+ P+ Y +I R L +A E+
Sbjct: 257 NAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVV 316
Query: 210 VEM 212
+M
Sbjct: 317 YDM 319
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 86 QQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTDFVT 145
+G L +A +LF+ GV+P+ +Y+LLM L + S A+ L +M+++ +
Sbjct: 167 HRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVV---- 222
Query: 146 GFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPD 185
P V +Y LI G+C G+ AM +L M G PD
Sbjct: 223 ---PDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD 259
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 79/194 (40%), Gaps = 37/194 (19%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSK 127
G++P+ Y+ L+ LS A LF +M+ V+PD +Y +L+ CR G+ +
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCR-KGQVNG 243
Query: 128 AFHLHDEMIQKS-----------------------LTDFVT-GFSPFVVTYNALIHGYCF 163
A L D+M+ K L + ++ GFSP N L+ G+C
Sbjct: 244 AMELLDDMLNKGFVPDRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCS 303
Query: 164 LGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDEN 223
G+ EA ++ + + G + ++ VI E EK +L++
Sbjct: 304 FGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDE-----------SEKIKLFLEDA 352
Query: 224 TRESLMKDLSDVDT 237
+E + D VD
Sbjct: 353 VKEEITGDTRIVDV 366
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 12/159 (7%)
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFH 130
L D++ + A+I GL + +EA+ LF +M G++P Y +S ++ C+
Sbjct: 250 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ 309
Query: 131 LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYS 190
LH +++ GFS NAL+ Y LG + A I M++ DAV+Y+
Sbjct: 310 LHGLVLK-------LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR----DAVTYN 358
Query: 191 TVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLM 229
T+I+ + KA EL M D D NT SL+
Sbjct: 359 TLINGLSQCGYGEKAMELFKRM-HLDGLEPDSNTLASLV 396
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 28/151 (18%)
Query: 71 LPDNNGYS--ALILGLYQQGRLSEALDLFREMVRSG-VLPDEYTYSLLMDTCRLTG--EF 125
+P+ N +S LI G Q GR+SE L F+ MV G V+P++ T +L++ C G +F
Sbjct: 147 MPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDF 206
Query: 126 SKAFHLHDEM---------IQKSLTDFVTGFSPF--------------VVTYNALIHGYC 162
K H + E ++ +L D ++++N +I+G
Sbjct: 207 GKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLA 266
Query: 163 FLGRFVEAMGILRGMAEMGLPPDAVSYSTVI 193
G EA+ + M G+ PD V++ V+
Sbjct: 267 AHGHGTEALNLFHEMKNSGISPDKVTFVGVL 297
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 77/163 (47%), Gaps = 8/163 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+ ++ D GYS ++ ++G L A +F EM++ G + + Y++ + C G+ +
Sbjct: 298 KNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKE 357
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
A L EM + +G SP+ T+N LI G+ G + + M GL P
Sbjct: 358 AERLLSEMEE-------SGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCS 410
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMK 230
+++ ++ + + +A E+ + +K + DE+T L++
Sbjct: 411 AFNEMVKSVSKIENVNRANEILTKSIDKG-FVPDEHTYSHLIR 452
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 12/148 (8%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRS-GVLPDEYTYSLLMDTCRLTGEFSKAFH 130
PD ++A++ + EAL LF M R G++PD T+ ++ C +
Sbjct: 227 PDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKE 286
Query: 131 LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYS 190
+H ++I G VV ++L+ Y G EA + GM++ ++VS+S
Sbjct: 287 IHGKLI-------TNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSK----KNSVSWS 335
Query: 191 TVISWFHRNRELGKAYELKVEMDEKDIW 218
++ + +N E KA E+ EM+EKD++
Sbjct: 336 ALLGGYCQNGEHEKAIEIFREMEEKDLY 363
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 27/154 (17%)
Query: 76 GYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEM 135
+++LI G + G+ +A+ L+ +M GV PD +T+ ++ C G +H ++
Sbjct: 162 AWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDL 221
Query: 136 IQKSL-----------------TDFVTGFSPF-------VVTYNALIHGYCFLGRFVEAM 171
+++ D V + F V++N+++ GY G EA+
Sbjct: 222 VKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEAL 281
Query: 172 GILRGMAEMGLPPDAVSYSTVISW---FHRNREL 202
I R M + G+ PD V+ S+V++ F R+L
Sbjct: 282 DIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQL 315
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 10/170 (5%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSKAFHLHDEM 135
Y L+ GL + G+L EA +F +M GV D Y S+++ CR SK F E+
Sbjct: 345 YCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCR-----SKRFKEAKEL 399
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISW 195
+ S T + +V N ++ YC G M +++ M E + PD ++ +I +
Sbjct: 400 SRDSETTYEKCD---LVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKY 456
Query: 196 FHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVDTYTSVMNDY 245
F + + AY+ ++M K L+E SL+ L + + Y
Sbjct: 457 FIKEKLHLLAYQTTLDMHSKG-HRLEEELCSSLIYHLGKIRAQAEAFSVY 505
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 35/160 (21%)
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTC-RLTGEFSKAFHLHDEMI 136
++++ L + G+L + LF +M R G+ PD TY+ L+ C ++ + KA L E+
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELP 229
Query: 137 QKSLT-----------------------DF-----VTGFSPFVVTYNALIHGYCFLGRFV 168
+ +F V G SP + Y++L++ Y + G +
Sbjct: 230 HNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYK 289
Query: 169 EAMGILRGMAEMGLPPDAVSYSTVIS------WFHRNREL 202
+A ++ M +GL P+ V +T++ F R+REL
Sbjct: 290 KADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSREL 329
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 7/142 (4%)
Query: 76 GYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEM 135
Y+ L+ + ++ + + + M +S PD YTY+++++ G + + E+
Sbjct: 770 AYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKEL 829
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISW 195
+ +G P + +YN LI Y G EA+G+++ M + PD V+Y+ +++
Sbjct: 830 KE-------SGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTA 882
Query: 196 FHRNRELGKAYELKVEMDEKDI 217
RN E +A + + M + I
Sbjct: 883 LRRNDEFLEAIKWSLWMKQMGI 904
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFH 130
+PDN YS LI + ++G+ A+ LF EM SG PD Y+ L+ H
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITA-----------H 178
Query: 131 LHDEMIQKSLTDFVTGF----------SPFVVTYNALIHGYCFLGRFVEAMGILRGMAEM 180
LH K+L + V G+ P VVTYN L+ + G+ + + + +
Sbjct: 179 LHTRDKAKAL-EKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMS 237
Query: 181 GLPPDAVSYSTVISWFHRN 199
+ PD +++ V+ + +N
Sbjct: 238 PVSPDVYTFNGVMDAYGKN 256
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 75 NGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSKAFHLHD 133
N + ++ G EA+ +F + G+ + + +LL+DT C+
Sbjct: 156 NTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCK---------EKRV 206
Query: 134 EMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVI 193
E + L + +P T+N IHG+C R EA+ ++ M G P +SY+T+I
Sbjct: 207 EQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTII 266
Query: 194 SWFHRNRELGKAYELKVEMD 213
+ + E K YE+ EM+
Sbjct: 267 RCYCQQFEFIKVYEMLSEME 286
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+ + + L+ L ++ R+ +A + ++ +S + P+ +T+++ + +A
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEA 243
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
EM GF P V++Y +I YC F++ +L M G PP++++
Sbjct: 244 LWTIQEMKGH-------GFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSIT 296
Query: 189 YSTVISWFHRNRELGKAYELKVEM 212
Y+T++S + +E +A + M
Sbjct: 297 YTTIMSSLNAQKEFEEALRVATRM 320
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 7/169 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G P++ Y+ ++ L Q EAL + M RSG PD Y+ L+ T G +A
Sbjct: 289 GSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEA 348
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGL-PPDAV 187
+ + + + + G S TYN++I YC +A+ +L+ M L PD
Sbjct: 349 ----ERVFRVEMPEL--GVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVH 402
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVD 236
+Y ++ + ++ + +L EM K LDE+T L++ L +
Sbjct: 403 TYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRAN 451
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 75 NGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDT-CRLTGEFSKAFHLHD 133
N + ++ G EA+ +F + G+ + + +LL+DT C+
Sbjct: 156 NTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCK---------EKRV 206
Query: 134 EMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVI 193
E + L + +P T+N IHG+C R EA+ ++ M G P +SY+T+I
Sbjct: 207 EQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTII 266
Query: 194 SWFHRNRELGKAYELKVEMD 213
+ + E K YE+ EM+
Sbjct: 267 RCYCQQFEFIKVYEMLSEME 286
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+ + + L+ L ++ R+ +A + ++ +S + P+ +T+++ + +A
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEA 243
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
EM GF P V++Y +I YC F++ +L M G PP++++
Sbjct: 244 LWTIQEMKGH-------GFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSIT 296
Query: 189 YSTVISWFHRNRELGKAYELKVEM 212
Y+T++S + +E +A + M
Sbjct: 297 YTTIMSSLNAQKEFEEALRVATRM 320
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 7/169 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G P++ Y+ ++ L Q EAL + M RSG PD Y+ L+ T G +A
Sbjct: 289 GSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEA 348
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGL-PPDAV 187
+ + + + + G S TYN++I YC +A+ +L+ M L PD
Sbjct: 349 ----ERVFRVEMPEL--GVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVH 402
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSDVD 236
+Y ++ + ++ + +L EM K LDE+T L++ L +
Sbjct: 403 TYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRAN 451
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 6/125 (4%)
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFH 130
+PD ++A++ G+ E L +F M+ SGV P+ YTYS+L+ G+
Sbjct: 229 MPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGK------ 282
Query: 131 LHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYS 190
H + + L G SP TY A+ + G+ A +L+ M G PD +
Sbjct: 283 THKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAVR 342
Query: 191 TVISW 195
+ +
Sbjct: 343 EALEY 347
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 8/147 (5%)
Query: 83 GLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQKSLTD 142
L + GR EAL+LF ++ +PD ++ +++ G+ + + M+
Sbjct: 206 ALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRML------ 259
Query: 143 FVTGFSPFVVTYNALIHGYCFLGR-FVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRE 201
+G SP TY+ LI G G+ +A L M G+ P+A +Y+ V F R +
Sbjct: 260 -ASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGK 318
Query: 202 LGKAYELKVEMDEKDIWWLDENTRESL 228
A EL EM K ++ RE+L
Sbjct: 319 EESARELLQEMKGKGFVPDEKAVREAL 345
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFH 130
+PDN YS LI + ++G+ A+ LF EM SG PD Y+ L+ H
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITA-----------H 178
Query: 131 LHDEMIQKSLTDFVTGF----------SPFVVTYNALIHGYCFLGRFVEAMGILRGMAEM 180
LH K+L + V G+ P VVTYN L+ + G+ + + + +
Sbjct: 179 LHTRDKAKAL-EKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMS 237
Query: 181 GLPPDAVSYSTVISWFHRN 199
+ PD +++ V+ + +N
Sbjct: 238 PVSPDVYTFNGVMDAYGKN 256
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 68/155 (43%), Gaps = 24/155 (15%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
++A+I G Q+G E L ++ +M ++ ++PD+YT++ + C H MI
Sbjct: 177 WNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMI 236
Query: 137 QKSL-----------------TDFVTGFSPF-------VVTYNALIHGYCFLGRFVEAMG 172
++ + + F G F V+T+ +LI GY + G+ E +
Sbjct: 237 KRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLK 296
Query: 173 ILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYE 207
M E G P+ V++ V++ + + K +E
Sbjct: 297 CFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE 331
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 12/147 (8%)
Query: 73 DNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLH 132
D Y++LI G QG AL LF+EM RSG+ PD T ++ C SK H
Sbjct: 447 DEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSAC----SHSKLVHEG 502
Query: 133 DEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTV 192
+ + K ++ G P + ++ ++ Y G +A I+ M P +++T+
Sbjct: 503 ERLFMKMQCEY--GIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMP---YKPSGATWATL 557
Query: 193 IS--WFHRNRELGK-AYELKVEMDEKD 216
++ H N ++GK A E +EM ++
Sbjct: 558 LNACHIHGNTQIGKWAAEKLLEMKPEN 584
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 13/152 (8%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
P+ Y LI+ L + + +A +LF+EM+ G + + Y+ L+ +G F AF L
Sbjct: 148 PNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTL 207
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
+ M P V TY+ LI + + F + +L M G+ P+ ++Y+T
Sbjct: 208 LERMKSSH------NCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNT 261
Query: 192 VISWFHRNRELGKAYELKVEMDEKDIWWLDEN 223
+I + GKA ++ VEM+ I L E+
Sbjct: 262 LIDAY------GKA-KMFVEMESTLIQMLGED 286
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRS-GVLPDEYTYSLLMDTCRLTGEFS 126
EG + ++ Y+AL+ + GR A L M S PD +TYS+L+ + F
Sbjct: 179 EGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFD 238
Query: 127 KAFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGM-AEMGLPPD 185
K L +M ++ G P +TYN LI Y FVE L M E PD
Sbjct: 239 KVQDLLSDMRRQ-------GIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPD 291
Query: 186 AVSYSTVISWFHRNREL 202
+ + ++ + F N ++
Sbjct: 292 SWTMNSTLRAFGGNGQI 308
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 24/173 (13%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+ P + S+L+ + + G L + ++R+ + D Y + L+D TG A
Sbjct: 220 GLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYA 279
Query: 129 FHLHDEMIQKSL---TDFVTGFS---------------------PFVVTYNALIHGYCFL 164
+ D M K++ V+G S P +T+N+L GY L
Sbjct: 280 RMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATL 339
Query: 165 GRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDEKDI 217
G+ +A+ ++ M E G+ P+ VS++ + S +N A ++ ++M E+ +
Sbjct: 340 GKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGV 392
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 63/151 (41%), Gaps = 24/151 (15%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+G+ P+ ++A+ G + G AL +F +M GV P+ T S L+
Sbjct: 355 KGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHS 414
Query: 128 AFHLHDEMIQKSLT-----------------DFVTGFSPF-------VVTYNALIHGYCF 163
+H ++K+L D + F + ++N ++ GY
Sbjct: 415 GKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAM 474
Query: 164 LGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
GR E + M E G+ PDA+++++V+S
Sbjct: 475 FGRGEEGIAAFSVMLEAGMEPDAITFTSVLS 505
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 25/143 (17%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVL-PDEYTYSLLMDTC----------RLTGEF 125
++++I G ++AL LFR M ++ VL P+E +++ ++ +C + G
Sbjct: 486 WNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLV 545
Query: 126 SKAFHLHDEMIQKSLTD--------------FVTGFSPFVVTYNALIHGYCFLGRFVEAM 171
K+ ++ D ++ +LTD F V +N +IHGY GR EA+
Sbjct: 546 VKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAV 605
Query: 172 GILRGMAEMGLPPDAVSYSTVIS 194
G+ R M G PD +++ +V++
Sbjct: 606 GLYRKMISSGEKPDGITFVSVLT 628
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 7/146 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G +PD ++ LI + + G + ++++ + G+ D TY L+ G+ +A
Sbjct: 282 GFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEA 341
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
F L + ++ G PF Y +I G C G F +A M PP+
Sbjct: 342 FRLLNNCVED-------GHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPV 394
Query: 189 YSTVISWFHRNRELGKAYELKVEMDE 214
Y+ +I+ R + A VEM E
Sbjct: 395 YTMLITMCGRGGKFVDAANYLVEMTE 420
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y++L+ L A L R M+R G+ PD+ TY++L++ G+ +A DEM
Sbjct: 185 YNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMS 244
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
++ GF+P + LI G G A ++ M + G PD +++ +I
Sbjct: 245 RR-------GFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAI 297
Query: 197 HRNRELGKAYELKVEM 212
++ E+ E +EM
Sbjct: 298 SKSGEV----EFCIEM 309
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 12/142 (8%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVL-PDEYTYSLLMDTCRLTGEFSKAFHLHDEM 135
++ LI G + G A L+REM SG++ PD +TY L+ + +H +
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 136 IQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISW 195
I+ +GF + N+L+H Y G A + M E D V++++VI+
Sbjct: 148 IR-------SGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE----KDLVAWNSVING 196
Query: 196 FHRNRELGKAYELKVEMDEKDI 217
F N + +A L EM+ K I
Sbjct: 197 FAENGKPEEALALYTEMNSKGI 218
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 11/143 (7%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
EG PD Y +I + + EA+ F EM + P + + C L
Sbjct: 261 EGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIF------CSLINGLGS 314
Query: 128 AFHLHD--EMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPD 185
L+D E ++S + +GF TYNAL+ YC+ R +A + M G+ P+
Sbjct: 315 EKKLNDALEFFERSKS---SGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPN 371
Query: 186 AVSYSTVISWFHRNRELGKAYEL 208
A +Y ++ R + +AYE+
Sbjct: 372 ARTYDIILHHLIRMQRSKEAYEV 394
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 17/151 (11%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
I PD Y+ LI L ++ L EA+ L E+ G+ PD T++ L+ + L G+F
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELG 234
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+ +M++K++ + TYNA + G + E + + + GL PD S
Sbjct: 235 EEIWAKMVEKNVAIDIR-------TYNARLLGLANEAKSKELVNLFGELKASGLKPDVFS 287
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDIWW 219
++ +I G E K MDE + W+
Sbjct: 288 FNAMIR--------GSINEGK--MDEAEAWY 308
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G+ PD ++A+I G +G++ EA ++E+V+ G PD+ T++LL+ G+F A
Sbjct: 280 GLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESA 339
Query: 129 FHLHDEMIQK 138
L E K
Sbjct: 340 IELFKETFSK 349
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 66/148 (44%), Gaps = 25/148 (16%)
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFH 130
+ D ++AL G Q G ++A D+++ M GV PD T ++ TC ++++
Sbjct: 464 IKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSC 523
Query: 131 LHDEMIQK----------SLTDFVT---------------GFSPFVVTYNALIHGYCFLG 165
++ ++I+ +L + T GF V++N +++GY G
Sbjct: 524 VYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHG 583
Query: 166 RFVEAMGILRGMAEMGLPPDAVSYSTVI 193
+ EA+ R M P+AV++ ++
Sbjct: 584 QAEEAVATFRQMKVEKFQPNAVTFVNIV 611
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
GI PD Y+A+I L + G + E+L LF EM + + P Y Y L+D + +G+F A
Sbjct: 278 GIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSA 337
Query: 129 FHLHDEMIQKSLTDF 143
L DE+ S D
Sbjct: 338 LQLSDELKNTSSLDL 352
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ I + + ++A LF EMV+ G YS +MD T S A L +M
Sbjct: 391 YAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMK 450
Query: 137 QKSLTDFVTGFSPFVVTYNALI--HGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
Q+ G P + YN+LI HG R E I + M + PD VSY+++IS
Sbjct: 451 QR-------GCKPNIWIYNSLIDMHGRAMDLRRAEK--IWKEMKRAKVLPDKVSYTSMIS 501
Query: 195 WFHRNRELGKAYEL 208
++R++EL + EL
Sbjct: 502 AYNRSKELERCVEL 515
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Query: 71 LPDNN--GYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
+PD + ++AL G GR EA+DLF++MV GV PD Y ++ C G+
Sbjct: 172 IPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSG 231
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
E I K + + + FV T L++ Y G+ +A + M E D V+
Sbjct: 232 -----EWIVKYMEEMEMQKNSFVRT--TLVNLYAKCGKMEKARSVFDSMVE----KDIVT 280
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEKDI 217
+ST+I + N + EL ++M ++++
Sbjct: 281 WSTMIQGYASNSFPKEGIELFLQMLQENL 309
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 55/142 (38%), Gaps = 24/142 (16%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y++LI G E LDLF + + G+ +T+ L++ C LH ++
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138
Query: 137 QKSLTDFVTGFSPF------------------------VVTYNALIHGYCFLGRFVEAMG 172
+ V + VVT+ AL GY GR EA+
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAID 198
Query: 173 ILRGMAEMGLPPDAVSYSTVIS 194
+ + M EMG+ PD+ V+S
Sbjct: 199 LFKKMVEMGVKPDSYFIVQVLS 220
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 24/147 (16%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
PD ++++ G + E LF E++ G+LPD YT+ L+ C + + L
Sbjct: 92 PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQL 151
Query: 132 HDEMIQKSLTD------------------------FVTGFSPFVVTYNALIHGYCFLGRF 167
H ++ L D F P VV YNA+I GY R
Sbjct: 152 HCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRP 211
Query: 168 VEAMGILRGMAEMGLPPDAVSYSTVIS 194
EA+ + R M L P+ ++ +V+S
Sbjct: 212 NEALSLFREMQGKYLKPNEITLLSVLS 238
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 25/147 (17%)
Query: 73 DNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLH 132
D ++ +I+G + ++ + L FR M+ SGV P ++TYS++++ C G +S +H
Sbjct: 264 DAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIH 323
Query: 133 DEMI-QKSLTD---------------------FVTG--FSPFVVTYNALIHGYCFLGRFV 168
+I SL D +V G +P +V++N++I G G
Sbjct: 324 ARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGE 383
Query: 169 EAMGILRGMAEMGLP-PDAVSYSTVIS 194
+AM + R + M P PD ++S IS
Sbjct: 384 QAMLMYRRLLRMSTPRPDEYTFSAAIS 410
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 28/172 (16%)
Query: 71 LPDNNG--YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
L D +G ++ +I GL Q +EA L +MVR G+ P TYS+L+ + T +
Sbjct: 426 LHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQG 485
Query: 129 FHLH------------DEMIQKSLTD--------------FVTGFSPFVVTYNALIHGYC 162
H+H D ++Q SL F V++N++I G
Sbjct: 486 KHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLS 545
Query: 163 FLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFHRNRELGKAYELKVEMDE 214
G +A+ + + M + G P++V++ V+S + + + EL M E
Sbjct: 546 HHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKE 597
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
++A+I+G Q G EA+ LF +M+ + PDE T++ ++ +C +FS + + + +
Sbjct: 310 WNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSC---AKFSAIWEI--KQV 364
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVI 193
Q +T G + F+ N+LI Y G EA+ + E PD VS+++VI
Sbjct: 365 QAMVTK--KGSADFLSVANSLISSYSRNGNLSEALLCFHSIRE----PDLVSWTSVI 415
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 70/151 (46%), Gaps = 27/151 (17%)
Query: 71 LPDNN--GYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
+P+ N ++A+I G Q+ R+ L L+ +M +S P++YT++ L+ C +G +
Sbjct: 181 MPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQG 240
Query: 129 FHLHDEMIQKSLT-----------------DFVTGFSPF-------VVTYNALIHGYCFL 164
+H + + L D F F VV++N++I GY
Sbjct: 241 RSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQH 300
Query: 165 GRFVEAMGILR-GMAEMGLPPDAVSYSTVIS 194
G ++A+ + M + G PDA++Y V+S
Sbjct: 301 GLAMQAIELFELMMPKSGTKPDAITYLGVLS 331
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 66/148 (44%), Gaps = 10/148 (6%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
+GI P+ Y++LI L + + EA +F EM+ G+ P TY M R TGE +
Sbjct: 367 KGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILR-TGE--E 423
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
F L +M + G P V TY LI C F + + M E + PD
Sbjct: 424 VFELLAKMRK-------MGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLS 476
Query: 188 SYSTVISWFHRNRELGKAYELKVEMDEK 215
SY +I N ++ +AY EM +K
Sbjct: 477 SYIVMIHGLFLNGKIEEAYGYYKEMKDK 504
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 15/203 (7%)
Query: 16 PDKASKVYCQMIDSGVTPTVDTYKTLXXXXXXXXXXXXXXXXXXXXXXXXXXEGILPDNN 75
P +A +V+ +M + GV V +Y ++ E I PD
Sbjct: 283 PREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK----ECIEPDRK 338
Query: 76 GYSALILGLYQQGRLSEALDLFREM-VRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDE 134
Y+A++ L + +SEA +L + M G+ P+ TY+ L+ + +A + DE
Sbjct: 339 VYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDE 398
Query: 135 MIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVIS 194
M++K G P + TY+A + L E +L M +MG P +Y +I
Sbjct: 399 MLEK-------GLFPTIRTYHAFMR---ILRTGEEVFELLAKMRKMGCEPTVETYIMLIR 448
Query: 195 WFHRNRELGKAYELKVEMDEKDI 217
R R+ L EM EK +
Sbjct: 449 KLCRWRDFDNVLLLWDEMKEKTV 471
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 18/158 (11%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
++ALI G + G L A LF +M + D Y+ +MD +G+ + A L DEM
Sbjct: 147 WTALISGYIRCGELDLASKLFDQMPH---VKDVVIYNAMMDGFVKSGDMTSARRLFDEMT 203
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
K+ V+T+ +IHGYC + A + M E L VS++T+I +
Sbjct: 204 HKT-----------VITWTTMIHGYCNIKDIDAARKLFDAMPERNL----VSWNTMIGGY 248
Query: 197 HRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLSD 234
+N++ + L EM D+ T S++ +SD
Sbjct: 249 CQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISD 286
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 70 ILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAF 129
I PD Y L++GL + GR+ +LF EM +L D Y +L++ G+ A
Sbjct: 329 IKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSAC 388
Query: 130 HLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSY 189
+L ++++ +G+ + YNA+I G C + + +A + + E L PD +
Sbjct: 389 NLWEDLVD-------SGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETL 441
Query: 190 STV-ISWFHRNR 200
S + +++ NR
Sbjct: 442 SPIMVAYVVMNR 453
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 12/145 (8%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ L+ LY+ G + ++L LF EM + G PD +YS+ + G+ A H+++I
Sbjct: 510 YNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKII 569
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILR---GMAEMGLPPDAVSYSTVI 193
+ S P + Y +L G C +G M ++R G E G P Y+ +
Sbjct: 570 EMSCV-------PSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESG--PMEFKYALTV 620
Query: 194 SWFHRNRELGKAYELKVEMDEKDIW 218
+ K ++ EM+++ ++
Sbjct: 621 CHVCKGSNAEKVMKVVDEMNQEGVF 645
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 5/138 (3%)
Query: 78 SALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMIQ 137
S LI + A+ +F EM + G +++ L+ C + F + L DE Q
Sbjct: 106 STLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQ 165
Query: 138 KSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWFH 197
+ +P ++Y LI YC G+ +AM I+R M G+ ++++T++ +
Sbjct: 166 R-----YNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLY 220
Query: 198 RNRELGKAYELKVEMDEK 215
+N + +A L +EM K
Sbjct: 221 KNGLVDEAESLWIEMVNK 238
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 7/146 (4%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
PD + L+LG + G ++ + EMV+ G P+ TY + +D F +A L
Sbjct: 208 PDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRL 267
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
++M + F V LIHG ++A + +++ GL PD +Y+
Sbjct: 268 FEDMDR-------LDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNA 320
Query: 192 VISWFHRNRELGKAYELKVEMDEKDI 217
++S + ++ A ++ EM+EK I
Sbjct: 321 LMSSLMKCGDVSGAIKVMKEMEEKGI 346
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 7/144 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G P + +LI + G+L AL L+ EM +SG P+ Y++++++ +G+ A
Sbjct: 378 GHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVA 437
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
+ +M + GF P TY+ L+ + G+ AM I M GL P S
Sbjct: 438 MTVFKDMEK-------AGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSS 490
Query: 189 YSTVISWFHRNRELGKAYELKVEM 212
Y ++++ R + A ++ +EM
Sbjct: 491 YISLLTLLANKRLVDVAGKILLEM 514
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 7/122 (5%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
P + +S+L+ + + GRL ++ ++ EM G P + L+D+ G+ A L
Sbjct: 346 PSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRL 405
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
DEM + +GF P Y +I + G+ AM + + M + G P +YS
Sbjct: 406 WDEMKK-------SGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSC 458
Query: 192 VI 193
++
Sbjct: 459 LL 460
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y++LI G G +EA+ LF M+ SG+ PD+YT+ + C + +H ++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+ G++ + N+L+H Y G A + M+E + VS++++I +
Sbjct: 162 K-------MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSER----NVVSWTSMICGY 210
Query: 197 HRNRELGK 204
R R+ K
Sbjct: 211 AR-RDFAK 217
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y++LI G G +EA+ LF M+ SG+ PD+YT+ + C + +H ++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+ G++ + N+L+H Y G A + M+E + VS++++I +
Sbjct: 162 K-------MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSE----RNVVSWTSMICGY 210
Query: 197 HRNRELGK 204
R R+ K
Sbjct: 211 AR-RDFAK 217
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 7/127 (5%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
E I PD ++ LI GL ++GR+ E +DL M G P+ TY + L G K
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEV-----LYGLLDK 320
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
+L + + + + G P ++Y ++ G C VE +LR M G P +
Sbjct: 321 KRNLEAKEMMSQMISW--GMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTL 378
Query: 188 SYSTVIS 194
+ V+
Sbjct: 379 MWWKVVQ 385
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 7/147 (4%)
Query: 69 GILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKA 128
G P + ++ ++ L E +F + GV D ++L+ +G A
Sbjct: 162 GCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAA 221
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
L DE Q+ P V+T++ LI G+C G+F EA +L M + + PD ++
Sbjct: 222 LQLLDEFPQQK-------SRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTIT 274
Query: 189 YSTVISWFHRNRELGKAYELKVEMDEK 215
++ +IS + + + +L M K
Sbjct: 275 FNILISGLRKKGRVEEGIDLLERMKVK 301
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 52.0 bits (123), Expect = 4e-07, Method: Composition-based stats.
Identities = 41/183 (22%), Positives = 82/183 (44%), Gaps = 27/183 (14%)
Query: 78 SALILGLYQQGRLSEALDLFREMVR-SGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
+A+I +Y+ R SE++ LF+ + S ++P+ +Y+ +++ G +A ++ ++
Sbjct: 184 NAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHIL 243
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+ F+P VTY L G GR +A +LR M G D+ Y+ +I +
Sbjct: 244 ANA------PFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGY 297
Query: 197 HRNRELGKAYELKVEMDEK-------------DIWWLDENTRESLMKDLSDVDTYTSVMN 243
+ KA E E+ K + W+ N +E++ ++Y S+++
Sbjct: 298 LDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAM-------ESYRSLLD 350
Query: 244 DYF 246
F
Sbjct: 351 KKF 353
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 24/137 (17%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLH---- 132
++A+I G + G EA+D+F EM+ V PD + + + C G +A ++
Sbjct: 291 WNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVG 350
Query: 133 ------DEMIQKSLTDFVTGFSPF--------------VVTYNALIHGYCFLGRFVEAMG 172
D I +L D VV ++A+I GY GR EA+
Sbjct: 351 RSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAIS 410
Query: 173 ILRGMAEMGLPPDAVSY 189
+ R M G+ P+ V++
Sbjct: 411 LYRAMERGGVHPNDVTF 427
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
++ +I GL + GR +AL +F EM++SG + ++ +C G F +H ++
Sbjct: 314 WTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVL 373
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+ G++ N+LI Y G +++ I M E D VS++ +IS +
Sbjct: 374 RH-------GYTLDTPALNSLITMYAKCGHLDKSLVIFERMNE----RDLVSWNAIISGY 422
Query: 197 HRNRELGKAYELKVEMDEKDIWWLDENTRESLMKDLS 233
+N +L KA L EM K + +D T SL++ S
Sbjct: 423 AQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACS 459
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 25/143 (17%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLH---- 132
++ ++ G Q G EAL ++EM GVLPD+ T+ ++ C + + +H
Sbjct: 700 WTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIF 759
Query: 133 ------DEMIQKSLTDF------VTGFSPF---------VVTYNALIHGYCFLGRFVEAM 171
DE+ +L D + G S VV++N+LI+GY G +A+
Sbjct: 760 HLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDAL 819
Query: 172 GILRGMAEMGLPPDAVSYSTVIS 194
I M + + PD +++ V++
Sbjct: 820 KIFDSMRQSHIMPDEITFLGVLT 842
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 7/145 (4%)
Query: 68 EGILPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSK 127
E ++ D + Y LI G G++ EA L M + + Y Y+L+M+ G K
Sbjct: 275 ESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEK 334
Query: 128 AFHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAV 187
L+ EM + G +P TY L++G C G+ EAM L + D
Sbjct: 335 VIELYSEMSSR-------GVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEE 387
Query: 188 SYSTVISWFHRNRELGKAYELKVEM 212
YST+ +R + K+ E+ EM
Sbjct: 388 MYSTLSEECYRVGMIDKSLEVVAEM 412
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 24/145 (16%)
Query: 76 GYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTY-SLL-----MDTCRLTGEFSKAF 129
GY+ALI G G +A++ +REM +G+LPD+YT+ SLL M+ + AF
Sbjct: 128 GYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVHGLAF 187
Query: 130 HLHDEMIQKSLTDFVTGFSPFV------------------VTYNALIHGYCFLGRFVEAM 171
L + + VT +S F+ V +NAL++GY + RF +A+
Sbjct: 188 KLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDAL 247
Query: 172 GILRGMAEMGLPPDAVSYSTVISWF 196
+ M E G+ + ++V+S F
Sbjct: 248 LVFSKMREEGVGVSRHTITSVLSAF 272
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 15/126 (11%)
Query: 71 LPDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTG--EFSKA 128
+ D ++A+I GL + +++AL+LFREM V +E+T ++ C G E +
Sbjct: 217 IKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRW 276
Query: 129 FHLHDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVS 188
H E + L++FV NALI+ Y G EA + R M + D +S
Sbjct: 277 VHSFVENQRMELSNFVG---------NALINMYSRCGDINEARRVFRVMRD----KDVIS 323
Query: 189 YSTVIS 194
Y+T+IS
Sbjct: 324 YNTMIS 329
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 24/141 (17%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
Y+ +I G Q G +AL + REM + + PD +T S ++ + K +H +I
Sbjct: 210 YNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVI 269
Query: 137 QKSLTDFVTGFSPFV------------------------VTYNALIHGYCFLGRFVEAMG 172
+K + V S V +++N+L+ GY GR+ EA+
Sbjct: 270 RKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALR 329
Query: 173 ILRGMAEMGLPPDAVSYSTVI 193
+ R M + P AV++S+VI
Sbjct: 330 LFRQMVTAKVKPGAVAFSSVI 350
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 24/142 (16%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
++A+I G ++G EAL FREM SGV PD ++ C G S +H ++
Sbjct: 174 WTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVL 233
Query: 137 QKSLTDFV------------TGFSPF------------VVTYNALIHGYCFLGRFVEAMG 172
+ + V G F VV++N++I G+ G E++
Sbjct: 234 SQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLV 293
Query: 173 ILRGMAEMGLPPDAVSYSTVIS 194
R M E G PDAV+++ ++
Sbjct: 294 YFRKMQEKGFKPDAVTFTGALT 315
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
++++I G + + +A LF M+ G+ PD++TY+ ++DTC +H ++I
Sbjct: 571 WNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVI 630
Query: 137 QKSLTDFVTGFSPFV------------------------VTYNALIHGYCFLGRFVEAMG 172
+K L V S V VT+NA+I GY G+ EA+
Sbjct: 631 KKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQ 690
Query: 173 ILRGMAEMGLPPDAVSYSTVI 193
+ M + P+ V++ +++
Sbjct: 691 LFERMILENIKPNHVTFISIL 711
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 70/138 (50%), Gaps = 11/138 (7%)
Query: 77 YSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLHDEMI 136
+++++ G Q G +++++F +M R G+ D T+++++ C + S +H ++
Sbjct: 148 WNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVV 207
Query: 137 QKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTVISWF 196
+ G VV +AL+ Y RFVE++ + +G+ E ++VS+S +I+
Sbjct: 208 R-------VGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPE----KNSVSWSAIIAGC 256
Query: 197 HRNRELGKAYELKVEMDE 214
+N L A + EM +
Sbjct: 257 VQNNLLSLALKFFKEMQK 274
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 11/134 (8%)
Query: 73 DNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHLH 132
D ++++I+ L Q G EAL+LF M+ G+ PD TY + C G ++
Sbjct: 479 DTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYF 538
Query: 133 DEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYSTV 192
D M V P + Y ++ + G EA + +M + PD V++ ++
Sbjct: 539 DMMKD------VDKIIPTLSHYACMVDLFGRAGLLQEAQEFIE---KMPIEPDVVTWGSL 589
Query: 193 ISW--FHRNRELGK 204
+S H+N +LGK
Sbjct: 590 LSACRVHKNIDLGK 603
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 72 PDNNGYSALILGLYQQGRLSEALDLFREMVRSGVLPDEYTYSLLMDTCRLTGEFSKAFHL 131
P Y+ ++ L + GR E + + +M V PD Y++++ ++ KA L
Sbjct: 249 PGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKL 308
Query: 132 HDEMIQKSLTDFVTGFSPFVVTYNALIHGYCFLGRFVEAMGILRGMAEMGLPPDAVSYST 191
DE++ G +P V TYN I+G C A+ ++ M ++G P+ V+Y+
Sbjct: 309 FDELLL-------LGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNI 361
Query: 192 VISWFHRNRELGKAYELKVEMD 213
+I + +L +A L EM+
Sbjct: 362 LIKALVKAGDLSRAKTLWKEME 383