Miyakogusa Predicted Gene

Lj0g3v0251929.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0251929.1 Non Chatacterized Hit- tr|I3SCC8|I3SCC8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.22,0,Amidase,Amidase; GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE
SUBUNIT A,NULL; AMIDASE,Amidase; no description,CUFF.16516.1
         (252 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G64440.1 | Symbols: AtFAAH, FAAH | fatty acid amide hydrolase...   348   3e-96
AT3G25660.1 | Symbols:  | Amidase family protein | chr3:9339640-...    51   9e-07

>AT5G64440.1 | Symbols: AtFAAH, FAAH | fatty acid amide hydrolase |
           chr5:25766229-25770260 FORWARD LENGTH=607
          Length = 607

 Score =  348 bits (892), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 165/252 (65%), Positives = 203/252 (80%), Gaps = 1/252 (0%)

Query: 1   MLGASPTSRISLKPSPPCLPTLSLDDGSNALGSLRIGKYTPWFNNVHSTEVSDKCEDALS 60
           +LG+S   R +LKPSPPC P L   +GSNA+GSLR+GKYT WFN+V S+++SDKCED L 
Sbjct: 357 ILGSSSADRYNLKPSPPCFPKLLSHNGSNAIGSLRLGKYTKWFNDVSSSDISDKCEDILK 416

Query: 61  QLSKDHGCEMIEVVIPELLEMRTAHLVSIGSECLSSLNPDLEDGKGIKLTYDTRVSMALF 120
            LS +HGC+++E+V+PEL EMR AH++SIGS  LSSL P  E GK  KL+YDTR S A+F
Sbjct: 417 LLSNNHGCKVVEIVVPELEEMRAAHVISIGSPTLSSLTPYCEAGKNSKLSYDTRTSFAIF 476

Query: 121 RSFTAGDYVAAQCLRRRIMYYFMEIFKKVDVIVTPTTGMTAPRIPPSALESGETDMPTTG 180
           RSF+A DY+AAQCLRRR+M Y + IFK VDVIVTPTTGMTAP IPP AL++GET++  T 
Sbjct: 477 RSFSASDYIAAQCLRRRLMEYHLNIFKDVDVIVTPTTGMTAPVIPPDALKNGETNIQVTT 536

Query: 181 YLMRFVVPANLLGLPAISIPVGYDKEGLPIGLQIIGRPWAEATILRVASAVEKLCGESKK 240
            LMRFV+ ANLLG PAIS+PVGYDKEGLPIGLQI+GRPWAEAT+L +A+AVE+L   +KK
Sbjct: 537 DLMRFVLAANLLGFPAISVPVGYDKEGLPIGLQIMGRPWAEATVLGLAAAVEELAPVTKK 596

Query: 241 RPVSYYDVLRAN 252
            P  +YD+L  N
Sbjct: 597 -PAIFYDILNTN 607


>AT3G25660.1 | Symbols:  | Amidase family protein |
           chr3:9339640-9342044 REVERSE LENGTH=537
          Length = 537

 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 17/139 (12%)

Query: 104 GKGIKLTYDTRVSMALFRSFTAGDYVA----AQCLRRRIMYYFMEIFKKVDVIVTPTTGM 159
           G+G       R+ M  + + +AG Y A    AQ +R  I   F    ++ D++++P    
Sbjct: 391 GEGFGGEVKMRILMGTY-ALSAGYYDAYYKRAQQVRTLIRKDFKAALEQNDILISPAA-- 447

Query: 160 TAPRIPPSALESGET-DMPTTGYLMRFV-VPANLLGLPAISIPVGYDK---EGLPIGLQI 214
                P +A + GE  D P   Y    + V  NL GLPA+ +P G  +    GLP+GLQ+
Sbjct: 448 -----PSAAYKIGEKKDDPLAMYAGDIMTVNVNLAGLPAMVLPCGLVEGGPSGLPVGLQM 502

Query: 215 IGRPWAEATILRVASAVEK 233
           IG  + E  +L+V    E+
Sbjct: 503 IGAAFDEEKLLKVGHIFEQ 521