Miyakogusa Predicted Gene

Lj0g3v0251809.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0251809.1 tr|I0YP46|I0YP46_9CHLO SMAD/FHA domain-containing
protein OS=Coccomyxa subellipsoidea C-169 PE=4 SV=,39.1,2e-17,SMAD/FHA
domain,SMAD/FHA domain; seg,NULL; NUCLEAR INHIBITOR OF PROTEIN
PHOSPHATASE-1,NULL; Forkhead,CUFF.16504.1
         (226 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G21530.1 | Symbols:  | SMAD/FHA domain-containing protein  | ...   166   1e-41

>AT2G21530.1 | Symbols:  | SMAD/FHA domain-containing protein  |
           chr2:9219372-9220464 FORWARD LENGTH=209
          Length = 209

 Score =  166 bits (420), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 77/113 (68%), Positives = 93/113 (82%)

Query: 85  RWLLEPVGDGDTRHIGFKVDMPGAYEIASSVVTVGRVPEKADLVIPVATVSGVHARIQKK 144
           RWLL+PVGDGDTRHIG+KV MP  +EI+S  VT+GR+PEKAD+VIPVATVSGVHA I   
Sbjct: 86  RWLLKPVGDGDTRHIGYKVAMPAPFEISSGQVTIGRLPEKADVVIPVATVSGVHATINTN 145

Query: 145 PGKLLVTDLDSTNGTFIDDKRLRPGVISPVSSGSLVTFGDTHLAMFRVSKVGD 197
              LLVTD++STNGTFI+DKRL PGV +P   G+ +TFGDT+LA+FRV K+ D
Sbjct: 146 EKNLLVTDMNSTNGTFIEDKRLIPGVAAPAFPGTRITFGDTNLAIFRVFKLQD 198