Miyakogusa Predicted Gene

Lj0g3v0251049.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0251049.1 Non Chatacterized Hit- tr|O23560|O23560_ARATH
Putative uncharacterized protein AT4g17150
OS=Arabidop,59.29,5e-19,seg,NULL; no description,NULL;
UNCHARACTERIZED,NULL,CUFF.16446.1
         (167 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G17150.1 | Symbols:  | alpha/beta-Hydrolases superfamily prot...   176   8e-45
AT4G17150.2 | Symbols:  | alpha/beta-Hydrolases superfamily prot...   175   1e-44
AT3G23540.2 | Symbols:  | alpha/beta-Hydrolases superfamily prot...   149   7e-37
AT4G14290.1 | Symbols:  | alpha/beta-Hydrolases superfamily prot...   149   1e-36
AT3G23540.1 | Symbols:  | alpha/beta-Hydrolases superfamily prot...   148   1e-36

>AT4G17150.1 | Symbols:  | alpha/beta-Hydrolases superfamily protein
           | chr4:9638591-9641648 FORWARD LENGTH=502
          Length = 502

 Score =  176 bits (445), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 97/166 (58%), Positives = 113/166 (68%), Gaps = 2/166 (1%)

Query: 1   MAVQYMRRVIAKKAKFDIMNLNCLPVASKTFIPVLFGHGSDDKFIQPHHSDRISESYAGD 60
           +AVQYMRR+I KKAKF+IM+LNC+ V+ KTFIP LFGH S DKFIQPHHSD I + YAGD
Sbjct: 203 VAVQYMRRIIQKKAKFNIMDLNCVKVSPKTFIPALFGHASGDKFIQPHHSDLILKCYAGD 262

Query: 61  KNIIKFDGDHNSSRPQFFYDSVSIFFYNVLR--PPHVSSAHKLEKYYDFGDLKLGSGVDE 118
           KNIIKFDGDHNSSRPQ +YDSV +FFYNVLR  P   S + KLE YY  GD+   +G+DE
Sbjct: 263 KNIIKFDGDHNSSRPQSYYDSVLVFFYNVLRPPPISSSYSSKLESYYSLGDVNSATGLDE 322

Query: 119 SLLYEILSSLRXXXXXXXXXXXXXXXXXXXXXVSELLSAVAPLTDV 164
           S LYEI+S LR                      +ELLS   P+ D 
Sbjct: 323 SFLYEIISGLRSACIDVASSSSAPPAPLTTKPTNELLSEAMPMIDT 368


>AT4G17150.2 | Symbols:  | alpha/beta-Hydrolases superfamily protein
           | chr4:9638591-9640983 FORWARD LENGTH=387
          Length = 387

 Score =  175 bits (444), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 97/166 (58%), Positives = 113/166 (68%), Gaps = 2/166 (1%)

Query: 1   MAVQYMRRVIAKKAKFDIMNLNCLPVASKTFIPVLFGHGSDDKFIQPHHSDRISESYAGD 60
           +AVQYMRR+I KKAKF+IM+LNC+ V+ KTFIP LFGH S DKFIQPHHSD I + YAGD
Sbjct: 203 VAVQYMRRIIQKKAKFNIMDLNCVKVSPKTFIPALFGHASGDKFIQPHHSDLILKCYAGD 262

Query: 61  KNIIKFDGDHNSSRPQFFYDSVSIFFYNVLR--PPHVSSAHKLEKYYDFGDLKLGSGVDE 118
           KNIIKFDGDHNSSRPQ +YDSV +FFYNVLR  P   S + KLE YY  GD+   +G+DE
Sbjct: 263 KNIIKFDGDHNSSRPQSYYDSVLVFFYNVLRPPPISSSYSSKLESYYSLGDVNSATGLDE 322

Query: 119 SLLYEILSSLRXXXXXXXXXXXXXXXXXXXXXVSELLSAVAPLTDV 164
           S LYEI+S LR                      +ELLS   P+ D 
Sbjct: 323 SFLYEIISGLRSACIDVASSSSAPPAPLTTKPTNELLSEAMPMIDT 368


>AT3G23540.2 | Symbols:  | alpha/beta-Hydrolases superfamily protein
           | chr3:8445381-8448070 FORWARD LENGTH=423
          Length = 423

 Score =  149 bits (377), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 65/94 (69%), Positives = 78/94 (82%)

Query: 2   AVQYMRRVIAKKAKFDIMNLNCLPVASKTFIPVLFGHGSDDKFIQPHHSDRISESYAGDK 61
           A+Q+MRR I KKAKFDIM LN + VA  +F+PVLFGH  DD FI+PHHSDRI E+Y GDK
Sbjct: 51  AIQFMRRAIQKKAKFDIMELNTIKVAKASFVPVLFGHALDDDFIRPHHSDRIYEAYVGDK 110

Query: 62  NIIKFDGDHNSSRPQFFYDSVSIFFYNVLRPPHV 95
           NIIKF GDHNS RP F++DS++IFF+NVL+PP V
Sbjct: 111 NIIKFPGDHNSPRPPFYFDSINIFFHNVLQPPEV 144


>AT4G14290.1 | Symbols:  | alpha/beta-Hydrolases superfamily protein
           | chr4:8225547-8230057 REVERSE LENGTH=558
          Length = 558

 Score =  149 bits (376), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 64/94 (68%), Positives = 78/94 (82%)

Query: 2   AVQYMRRVIAKKAKFDIMNLNCLPVASKTFIPVLFGHGSDDKFIQPHHSDRISESYAGDK 61
           A+QYMRR + KKA F+I +LN + VA   F+PVLFGH  DD FIQPHHS+RI E+Y GDK
Sbjct: 194 AIQYMRRAVQKKANFNITDLNTIKVAKSCFVPVLFGHAVDDDFIQPHHSERIYEAYIGDK 253

Query: 62  NIIKFDGDHNSSRPQFFYDSVSIFFYNVLRPPHV 95
           NIIKFDGDHNS RPQF++DS++IFF+NVL+PP V
Sbjct: 254 NIIKFDGDHNSPRPQFYFDSINIFFHNVLQPPEV 287


>AT3G23540.1 | Symbols:  | alpha/beta-Hydrolases superfamily protein
           | chr3:8443665-8448070 FORWARD LENGTH=566
          Length = 566

 Score =  148 bits (374), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 65/94 (69%), Positives = 78/94 (82%)

Query: 2   AVQYMRRVIAKKAKFDIMNLNCLPVASKTFIPVLFGHGSDDKFIQPHHSDRISESYAGDK 61
           A+Q+MRR I KKAKFDIM LN + VA  +F+PVLFGH  DD FI+PHHSDRI E+Y GDK
Sbjct: 194 AIQFMRRAIQKKAKFDIMELNTIKVAKASFVPVLFGHALDDDFIRPHHSDRIYEAYVGDK 253

Query: 62  NIIKFDGDHNSSRPQFFYDSVSIFFYNVLRPPHV 95
           NIIKF GDHNS RP F++DS++IFF+NVL+PP V
Sbjct: 254 NIIKFPGDHNSPRPPFYFDSINIFFHNVLQPPEV 287