Miyakogusa Predicted Gene
- Lj0g3v0251009.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0251009.1 Non Chatacterized Hit- tr|F6HIC2|F6HIC2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,26.09,1e-18,PPR: pentatricopeptide repeat domain,Pentatricopeptide
repeat; PPR,Pentatricopeptide repeat; PGR3 (P,CUFF.16442.1
(466 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 448 e-126
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 443 e-124
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 436 e-122
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 424 e-119
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 418 e-117
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 418 e-117
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 417 e-117
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 405 e-113
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 397 e-111
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 397 e-110
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 395 e-110
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 394 e-110
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 393 e-109
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 393 e-109
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 393 e-109
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 390 e-109
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 389 e-108
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 387 e-108
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 386 e-107
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 385 e-107
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 384 e-107
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 384 e-107
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 382 e-106
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 379 e-105
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 377 e-105
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 377 e-104
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 377 e-104
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 375 e-104
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 374 e-104
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 373 e-103
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 372 e-103
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 371 e-103
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 369 e-102
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 368 e-102
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 368 e-102
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 367 e-102
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 367 e-102
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 365 e-101
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 365 e-101
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 364 e-101
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 361 e-100
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 358 4e-99
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 357 7e-99
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 357 7e-99
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 356 2e-98
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 356 2e-98
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 356 2e-98
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 355 4e-98
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 353 1e-97
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 353 1e-97
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 350 9e-97
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 350 1e-96
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 349 2e-96
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 347 8e-96
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 345 4e-95
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 343 2e-94
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 340 1e-93
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 340 2e-93
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 340 2e-93
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 338 7e-93
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 337 7e-93
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 337 8e-93
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 335 5e-92
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 335 6e-92
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 334 8e-92
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 332 5e-91
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 329 3e-90
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 5e-90
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 327 2e-89
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 325 3e-89
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 4e-89
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 319 2e-87
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 318 6e-87
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 7e-87
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 317 1e-86
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 316 2e-86
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 316 3e-86
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 4e-86
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 4e-86
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 313 1e-85
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 312 3e-85
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 312 4e-85
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 309 3e-84
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 308 5e-84
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 308 6e-84
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 304 7e-83
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 4e-82
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 296 1e-80
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 2e-78
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 7e-78
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 7e-76
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 3e-75
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 277 9e-75
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 273 2e-73
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 5e-73
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 271 8e-73
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 1e-72
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 1e-71
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 2e-71
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 262 3e-70
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 6e-70
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 7e-70
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 2e-69
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 259 2e-69
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 259 4e-69
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 5e-69
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 6e-69
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 4e-68
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 4e-67
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 5e-67
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 251 8e-67
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 248 5e-66
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 9e-66
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 1e-65
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 1e-65
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 246 3e-65
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 244 6e-65
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 3e-64
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 1e-63
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 1e-63
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 240 1e-63
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 240 2e-63
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 4e-63
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 6e-63
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 9e-63
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 234 9e-62
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 2e-61
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 5e-61
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 6e-61
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 231 8e-61
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 231 9e-61
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 1e-60
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 230 1e-60
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 229 4e-60
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 5e-60
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 6e-60
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 228 7e-60
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 227 1e-59
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 2e-59
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 3e-58
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 221 8e-58
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 1e-57
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 1e-57
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 219 4e-57
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 4e-57
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 5e-57
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 5e-57
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 7e-57
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 7e-57
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 2e-56
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 2e-56
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 5e-56
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 215 5e-56
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 2e-55
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 212 4e-55
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 7e-55
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 9e-55
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 9e-55
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 8e-54
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 1e-51
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 2e-51
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 4e-51
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 197 2e-50
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 2e-50
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 2e-50
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 3e-50
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 2e-49
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 9e-49
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 2e-48
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 2e-47
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 4e-47
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 1e-46
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 2e-46
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 2e-46
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 6e-46
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 9e-46
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 177 2e-44
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 3e-43
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 4e-43
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 5e-43
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 6e-43
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 3e-42
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 5e-42
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 5e-42
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 9e-42
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 5e-41
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 7e-40
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 1e-39
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 2e-37
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 4e-36
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 4e-29
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 6e-26
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 8e-24
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 102 7e-22
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 96 6e-20
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 8e-20
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 5e-19
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 1e-17
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 2e-17
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 87 2e-17
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 3e-16
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 82 8e-16
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 2e-15
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 79 5e-15
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 79 6e-15
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 7e-15
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 8e-14
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 75 1e-13
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 75 1e-13
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 75 1e-13
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 5e-13
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 7e-13
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 7e-13
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 72 7e-13
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 8e-13
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 72 1e-12
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 9e-12
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 68 2e-11
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 67 2e-11
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 65 1e-10
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 64 2e-10
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 64 2e-10
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 7e-10
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 7e-10
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 61 2e-09
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 2e-09
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 59 6e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 58 1e-08
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 58 2e-08
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 55 1e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 54 3e-07
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 54 3e-07
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 4e-07
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 53 6e-07
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 51 2e-06
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 448 bits (1153), Expect = e-126, Method: Compositional matrix adjust.
Identities = 209/465 (44%), Positives = 302/465 (64%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L++ YA G + A L+FD++P+ D +WN +I + G + A LF M ++N SW
Sbjct: 156 LINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISW 215
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
T++I G + M +EAL++F EM+ +P+ V++ L ACAQLG LE GK +H +
Sbjct: 216 TTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNK 275
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+ + LIDMY KCG +EE VF+ +++++V +W+++I G+A H
Sbjct: 276 TRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISK 335
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M ++G+KPN +TF VL ACS+ GLV++G+ + M RDY + P +EHYGC+VDLL
Sbjct: 336 FMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLG 395
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RAG L+EA+ I M + PN V+WGALL CR+HKNI L EE L +D + G YV
Sbjct: 396 RAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVH 455
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
+N++A KW++ + RRLMK +GV K PGCS+I+++G HEF+AGD +HP+ + I
Sbjct: 456 KANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSK 515
Query: 362 WEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMK 421
W + K++ GY+P+ +LLDL D ++E +++HSEKLA+ YGLI TKPG IRIMK
Sbjct: 516 WRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMK 575
Query: 422 NLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
NLRVC+DCH KL+S+I R+IV+RDR RFH F+DG C+C DYW
Sbjct: 576 NLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 119/296 (40%), Gaps = 37/296 (12%)
Query: 14 HARLMFDKMPQRDIATWNIMIAHLINVG--YVGAARDLFSSMPQRNVRSWTSVIYGLAKC 71
HAR++ + Q A + + + ++ A+ +F + + W +I G +
Sbjct: 34 HARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCS 93
Query: 72 GMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVC 131
E +L ++ M + N T ++L AC+ L E +H G+ +VY
Sbjct: 94 DEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAV 153
Query: 132 NALIDMYVKCGCLEEGYRVFEGMRERTVVSWSS--------------------------- 164
N+LI+ Y G + + +F+ + E VSW+S
Sbjct: 154 NSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAI 213
Query: 165 ----MIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
MI G+ M ++P+ V+ L AC+ +G +++G+ + + +
Sbjct: 214 SWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYL 273
Query: 221 RRDYGIVPGVEHYGC-LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
+ + V GC L+D+ ++ G +EEA EV N+ + W AL+ G H
Sbjct: 274 NKTRIRMDSV--LGCVLIDMYAKCGEMEEALEVFKNIKKKSVQ-AWTALISGYAYH 326
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 443 bits (1140), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/467 (46%), Positives = 307/467 (65%), Gaps = 3/467 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +YA G+ A+ +FD+MP+R + + MI G V AAR LF SM +R++ SW
Sbjct: 167 LVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSW 226
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDG-SKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
+I G A+ G +AL +F ++ +G KP+E+TVVA L AC+Q+G LE G+ +H F K
Sbjct: 227 NVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVK 286
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
+ NV VC LIDMY KCG LEE VF + +V+W++MI G+AMH
Sbjct: 287 SSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALR 346
Query: 181 XXXXMIRV-GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M + G++P +TFIG L AC+H GLV++G + M ++YGI P +EHYGCLV L
Sbjct: 347 LFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSL 406
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY 299
L RAG+L+ A E I NM++ + V+W ++LG C+LH + VL +E +L L++ N G Y
Sbjct: 407 LGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIY 466
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIF 359
V++SN+YA G +E V+++R LMK +G+ K PG S+I I+ VHEF AGD H ++K I+
Sbjct: 467 VLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIY 526
Query: 360 EMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRI 419
M K+ ++K GY+P+T+ VL DLE+ +KE L HSE+LA+ YGLI+TKPG ++I
Sbjct: 527 TMLRKISERIKSHGYVPNTNTVLQDLEET-EKEQSLQVHSERLAIAYGLISTKPGSPLKI 585
Query: 420 MKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
KNLRVC DCH KL+S+I R+IV+RDRNRFH F DG+C+C D+W
Sbjct: 586 FKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 135/312 (43%), Gaps = 45/312 (14%)
Query: 13 RHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCG 72
RH L+ + P ++ +H G + + LF ++ +T+ I + G
Sbjct: 54 RHNLLLHPRYPVLNLKLHRAYASH----GKIRHSLALFHQTIDPDLFLFTAAINTASING 109
Query: 73 MCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCN 132
+ ++A ++ ++ PNE T ++L +C+ + GK +H G + YV
Sbjct: 110 LKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVAT 165
Query: 133 ALIDMYVKCGCLEEGYRVFEGMRERT-------------------------------VVS 161
L+D+Y K G + +VF+ M ER+ +VS
Sbjct: 166 GLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVS 225
Query: 162 WSSMIVGFAMHXXXXXXXXXXXXMIRVGM-KPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
W+ MI G+A H ++ G KP+ +T + L ACS +G ++ GR + +
Sbjct: 226 WNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGR-WIHVF 284
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
+ I V+ L+D+ S+ G LEEA ++ N + + V W A++ G +H
Sbjct: 285 VKSSRIRLNVKVCTGLIDMYSKCGSLEEAV-LVFNDTPRKDIVAWNAMIAGYAMHG---Y 340
Query: 281 AEEAMRHLSKLD 292
+++A+R +++
Sbjct: 341 SQDALRLFNEMQ 352
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 436 bits (1122), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/467 (45%), Positives = 306/467 (65%), Gaps = 3/467 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMI-AHLINVGYVGAARDLFSSMPQRNVRS 60
+L +Y CG A+ +FD M ++D TW M+ + I+ Y AAR++ +SMPQ+++ +
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDY-EAAREVLNSMPQKDIVA 331
Query: 61 WTSVIYGLAKCGMCEEALKVFSEME-KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
W ++I + G EAL VF E++ + K N++T+V+ L ACAQ+G LE G+ +H +
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
K +G N +V +ALI MY KCG LE+ VF + +R V WS+MI G AMH
Sbjct: 392 KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAV 451
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M +KPN VTF V ACSH GLVD+ +L M +YGIVP +HY C+VD+
Sbjct: 452 DMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDV 511
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY 299
L R+G LE+A + I M +PP+ VWGALLG C++H N+ LAE A L +L+ NDG +
Sbjct: 512 LGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAH 571
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIF 359
V++SN+YA+ GKWE VS +R+ M+ G+KK PGCSSI IDG++HEF++GD HP ++ ++
Sbjct: 572 VLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVY 631
Query: 360 EMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRI 419
+++ K+K GY P+ S VL +E+ + KE L HSEKLA+ YGLI+T+ IR+
Sbjct: 632 GKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRV 691
Query: 420 MKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
+KNLRVC DCH+ KL+S++ +REI+VRDR RFH F++G C+C D+W
Sbjct: 692 IKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 146/282 (51%), Gaps = 34/282 (12%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ N +I + G + +A +F+++ +++V SW S+I G + G ++AL++F +ME
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
+ K + VT+V VL ACA++ +LEFG+ V + + N N+ + NA++DMY KCG +E
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM-------------------- 185
+ R+F+ M E+ V+W++M+ G+A+ M
Sbjct: 285 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGK 344
Query: 186 ------------IRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHY 233
++ MK N +T + L AC+ VG ++ GR + + +++ +GI
Sbjct: 345 PNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK-HGIRMNFHVT 403
Query: 234 GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
L+ + S+ G LE++REV N + VW A++GG +H
Sbjct: 404 SALIHMYSKCGDLEKSREVF-NSVEKRDVFVWSAMIGGLAMH 444
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 137/283 (48%), Gaps = 6/283 (2%)
Query: 34 IAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGS-KPN 92
+A L + + AR +F +P+ N +W ++I A ++ F +M + PN
Sbjct: 71 MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPN 130
Query: 93 EVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE 152
+ T ++ A A++ L G+S+H A + +V+V N+LI Y CG L+ +VF
Sbjct: 131 KYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFT 190
Query: 153 GMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDK 212
++E+ VVSW+SMI GF M +K ++VT +GVL AC+ + ++
Sbjct: 191 TIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEF 250
Query: 213 GRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGC 272
GR + + + + V + ++D+ ++ G +E+A+ + M N V W +L G
Sbjct: 251 GRQVCSYIEENRVNV-NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDN-VTWTTMLDGY 308
Query: 273 RLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEV 315
+ ++ A E + + + D++ + + + Y + GK E
Sbjct: 309 AISEDYEAAREVLNSMPQKDIV---AWNALISAYEQNGKPNEA 348
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 424 bits (1089), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/466 (44%), Positives = 302/466 (64%), Gaps = 2/466 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+H+YA+CG A +F +M RD+ +W M+A G V AR++F MP RN+ +W
Sbjct: 158 LVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTW 217
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+ +I G AK E+A+ +F M+++G NE +V+V+ +CA LG LEFG+ + +
Sbjct: 218 SIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVK 277
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+ N+ + AL+DM+ +CG +E+ VFEG+ E +SWSS+I G A+H
Sbjct: 278 SHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHY 337
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
MI +G P VTF VL ACSH GLV+KG + M++D+GI P +EHYGC+VD+L
Sbjct: 338 FSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLG 397
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RAG+L EA I M V PN + GALLG C+++KN +AE L K+ + GYYV+
Sbjct: 398 RAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVL 457
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAG-DETHPQAKGIFE 360
+SN+YA AG+W+++ +R +MK + VKK PG S I IDG +++F G D+ HP+ I
Sbjct: 458 LSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRR 517
Query: 361 MWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIM 420
WE++L K+++ GY +T D+ D ++KE ++ HSEKLA+ YG++ TKPG +IRI+
Sbjct: 518 KWEEILGKIRLIGYKGNTGDAFFDV-DEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIV 576
Query: 421 KNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
KNLRVCEDCH KL+SE+ RE++VRDRNRFH F++G C+C+DYW
Sbjct: 577 KNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 118/280 (42%), Gaps = 36/280 (12%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
+G A +FS + N+ + +I + +A +++M K P+ +T ++ A
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA 126
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
+++ + G+ H GF +VYV N+L+ MY CG + R+F M R VVSW
Sbjct: 127 SSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSW 186
Query: 163 SSMIV-------------------------------GFAMHXXXXXXXXXXXXMIRVGMK 191
+SM+ G+A + M R G+
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV 246
Query: 192 PNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEARE 251
N + V+ +C+H+G ++ G + + + V + LVD+ R G +E+A
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTA-LVDMFWRCGDIEKAIH 305
Query: 252 VIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL 291
V + + + W +++ G +H + A +AM + S++
Sbjct: 306 VFEGLP-ETDSLSWSSIIKGLAVHGH---AHKAMHYFSQM 341
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/479 (44%), Positives = 308/479 (64%), Gaps = 15/479 (3%)
Query: 2 LLHLYASCGETRHARLMFDK---------MPQR-----DIATWNIMIAHLINVGYVGAAR 47
L+ +Y CG + AR++F K M R +I WN+MI + +G AAR
Sbjct: 169 LVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAAR 228
Query: 48 DLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLG 107
LF M QR+V SW ++I G + G ++A++VF EM+K +PN VT+V+VL A ++LG
Sbjct: 229 MLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLG 288
Query: 108 DLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIV 167
LE G+ +H +A+ +G + + +ALIDMY KCG +E+ VFE + V++WS+MI
Sbjct: 289 SLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMIN 348
Query: 168 GFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIV 227
GFA+H M + G++P+ V +I +L ACSH GLV++GR + M G+
Sbjct: 349 GFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLE 408
Query: 228 PGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRH 287
P +EHYGC+VDLL R+G L+EA E I NM + P+ V+W ALLG CR+ N+ + +
Sbjct: 409 PRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANI 468
Query: 288 LSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVA 347
L + + G YV +SN+YA G W EVS +R MK + ++K PGCS I IDGV+HEFV
Sbjct: 469 LMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVV 528
Query: 348 GDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYG 407
D++HP+AK I M ++ K+++ GY P T+ VLL+LE+ + KE L+ HSEK+A +G
Sbjct: 529 EDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEE-EDKENVLHYHSEKIATAFG 587
Query: 408 LINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
LI+T PG IRI+KNLR+CEDCH++ KL+S++ R+I VRDR RFH F+DG+C+C DYW
Sbjct: 588 LISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 134/308 (43%), Gaps = 77/308 (25%)
Query: 14 HARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGM 73
+A +F++MPQR+ +WN +I G+ + D ++I
Sbjct: 77 YAHKIFNQMPQRNCFSWNTIIR-----GFSESDED-------------KALI-------- 110
Query: 74 CEEALKVFSEMEKDG-SKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCN 132
A+ +F EM D +PN T +VL ACA+ G ++ GK +H A GF + +V +
Sbjct: 111 ---AITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMS 167
Query: 133 ALIDMYVKCGCLE-----------------------------------EGY--------- 148
L+ MYV CG ++ +GY
Sbjct: 168 NLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAA 227
Query: 149 -RVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHV 207
+F+ MR+R+VVSW++MI G++++ M + ++PNYVT + VL A S +
Sbjct: 228 RMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRL 287
Query: 208 GLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGA 267
G ++ G L + D GI L+D+ S+ G +E+A V + N + W A
Sbjct: 288 GSLELGE-WLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLP-RENVITWSA 345
Query: 268 LLGGCRLH 275
++ G +H
Sbjct: 346 MINGFAIH 353
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 418 bits (1074), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/472 (43%), Positives = 305/472 (64%), Gaps = 8/472 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL++Y+SCG+ R A+ +FD +D+ WN ++ G + AR LF MP+RNV SW
Sbjct: 103 LLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISW 162
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGS-----KPNEVTVVAVLVACAQLGDLEFGKSVH 116
+ +I G CG +EAL +F EM+ +PNE T+ VL AC +LG LE GK VH
Sbjct: 163 SCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVH 222
Query: 117 RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM-RERTVVSWSSMIVGFAMHXXX 175
+ ++ + ALIDMY KCG LE RVF + ++ V ++S+MI AM+
Sbjct: 223 AYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLT 282
Query: 176 XXXXXXXXXMIRV-GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYG 234
M + PN VTF+G+L AC H GL+++G++ +M ++GI P ++HYG
Sbjct: 283 DECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYG 342
Query: 235 CLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLL 294
C+VDL R+G ++EA IA+M + P+ ++WG+LL G R+ +I E A++ L +LD +
Sbjct: 343 CMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPM 402
Query: 295 NDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQ 354
N G YV++SNVYA+ G+W EV IR M+ +G+ K PGCS + ++GVVHEFV GDE+ +
Sbjct: 403 NSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQE 462
Query: 355 AKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPG 414
++ I+ M ++++ +++ GY+ DT VLLDL + K KEI L HSEKLA+ + L+ T+PG
Sbjct: 463 SERIYAMLDEIMQRLREAGYVTDTKEVLLDLNE-KDKEIALSYHSEKLAIAFCLMKTRPG 521
Query: 415 MSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
+RI+KNLR+C DCH K++S++ +REIVVRD NRFH F+DG+C+C+D+W
Sbjct: 522 TPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 417 bits (1072), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/453 (44%), Positives = 286/453 (63%), Gaps = 3/453 (0%)
Query: 15 ARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMC 74
A+ +FD MP R+++TWN MI G + A++LF MP+R+ SW ++I G ++ G
Sbjct: 331 AKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHS 390
Query: 75 EEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH-RFAKGNGFLRNVYVCNA 133
EAL++F +ME++G + N + + L CA + LE GK +H R KG G+ +V NA
Sbjct: 391 FEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKG-GYETGCFVGNA 449
Query: 134 LIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPN 193
L+ MY KCG +EE +F+ M + +VSW++MI G++ H M R G+KP+
Sbjct: 450 LLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPD 509
Query: 194 YVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVI 253
T + VL ACSH GLVDKGR M +DYG++P +HY C+VDLL RAG LE+A ++
Sbjct: 510 DATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLM 569
Query: 254 ANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWE 313
NM P+ +WG LLG R+H N LAE A + ++ N G YV++SN+YA +G+W
Sbjct: 570 KNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWG 629
Query: 314 EVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKG 373
+V ++R M+ +GVKK PG S I I H F GDE HP+ IF E+L ++MK G
Sbjct: 630 DVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAG 689
Query: 374 YIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAF 433
Y+ TSVVL D+E+ +++ + Y HSE+LA+ YG++ G IR++KNLRVCEDCH A
Sbjct: 690 YVSKTSVVLHDVEEEEKERMVRY-HSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAI 748
Query: 434 KLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
K ++ I R I++RD NRFH FKDG+C+C DYW
Sbjct: 749 KYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 123/268 (45%), Gaps = 22/268 (8%)
Query: 14 HARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGM 73
AR FD M RD+ +WN +I G + AR LF P ++V +WT+++ G + M
Sbjct: 237 EARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRM 296
Query: 74 CEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNA 133
EEA ++F +M + NEV+ A+L Q +E K + RNV N
Sbjct: 297 VEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMAKELFDVMP----CRNVSTWNT 348
Query: 134 LIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPN 193
+I Y +CG + E +F+ M +R VSW++MI G++ M R G + N
Sbjct: 349 MITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLN 408
Query: 194 YVTFIGVLHACSHVGLVDKGRALLTIMRRDYG-IVPGVEHYGCLVD-----LLSRAGRLE 247
+F L C+ V ++ G+ L +G +V G GC V + + G +E
Sbjct: 409 RSSFSSALSTCADVVALELGKQL-------HGRLVKGGYETGCFVGNALLLMYCKCGSIE 461
Query: 248 EAREVIANMSVPPNRVVWGALLGGCRLH 275
EA ++ M+ + V W ++ G H
Sbjct: 462 EANDLFKEMA-GKDIVSWNTMIAGYSRH 488
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 138/324 (42%), Gaps = 60/324 (18%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
Y GE AR +FD+MP+RD+ +WN+MI + +G AR+LF MP+R+V SW +++
Sbjct: 105 YLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTML 164
Query: 66 YGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLE----FGKSVHRFAKG 121
G A+ G ++A VF M + N+V+ A+L A Q +E KS +A
Sbjct: 165 SGYAQNGCVDDARSVFDRM----PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWA-- 218
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+ N L+ +VK + E + F+ M R VVSW+++I G+A
Sbjct: 219 ------LVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYA----------- 261
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
G +D+ R L D V V + +V
Sbjct: 262 ------------------------QSGKIDEARQLF-----DESPVQDVFTWTAMVSGYI 292
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
+ +EEARE+ M N V W A+L G + + +A+E + N +
Sbjct: 293 QNRMVEEARELFDKMP-ERNEVSWNAMLAGYVQGERMEMAKEL---FDVMPCRNVSTWNT 348
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSR 325
M YA+ GK E + M R
Sbjct: 349 MITGYAQCGKISEAKNLFDKMPKR 372
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 124/302 (41%), Gaps = 21/302 (6%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
DI WN+ I+ + G A +F MP+ + S+ +I G + G E A K+F EM
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM- 121
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
P V ++ + + GK+ F R+V N ++ Y + GC++
Sbjct: 122 -----PERDLVSWNVMIKGYVRNRNLGKARELFEIMPE--RDVCSWNTMLSGYAQNGCVD 174
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
+ VF+ M E+ VSW++++ + + + N+ V C
Sbjct: 175 DARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKS------RENWAL---VSWNCL 225
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
G V K + + D V V + ++ +++G+++EAR++ V + W
Sbjct: 226 LGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPV-QDVFTW 284
Query: 266 GALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSR 325
A++ G ++ + EEA K+ N+ + M Y + + E + +M R
Sbjct: 285 TAMVSGYIQNR---MVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR 341
Query: 326 GV 327
V
Sbjct: 342 NV 343
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/510 (40%), Positives = 301/510 (59%), Gaps = 49/510 (9%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMI--------------------------- 34
L+ +Y CG ARL+ D+M +RD+ +WN ++
Sbjct: 181 LVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHD 240
Query: 35 ----AHLI---------NVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVF 81
A L+ NV YV +D+F M ++++ SW +I K M EA++++
Sbjct: 241 AGTMASLLPAVSNTTTENVMYV---KDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELY 297
Query: 82 SEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKC 141
S ME DG +P+ V++ +VL AC L GK +H + + + N+ + NALIDMY KC
Sbjct: 298 SRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKC 357
Query: 142 GCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVL 201
GCLE+ VFE M+ R VVSW++MI + + G+ P+ + F+ L
Sbjct: 358 GCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTL 417
Query: 202 HACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPN 261
ACSH GL+++GR+ +M Y I P +EH C+VDLL RAG+++EA I +MS+ PN
Sbjct: 418 AACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPN 477
Query: 262 RVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRL 321
VWGALLG CR+H + + A L +L GYYV++SN+YA+AG+WEEV+ IR +
Sbjct: 478 ERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNI 537
Query: 322 MKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVV 381
MKS+G+KK PG S++ ++ ++H F+ GD +HPQ+ I+ + L+ KMK GY+PD+
Sbjct: 538 MKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESA 597
Query: 382 LLDLEDAKQKEIFLYRHSEKLALVYGLINTK-----PGMSIRIMKNLRVCEDCHAAFKLV 436
L D+E+ + KE L HSEKLA+V+ L+NTK +IRI KNLR+C DCH A KL+
Sbjct: 598 LHDVEE-EDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLI 656
Query: 437 SEIENREIVVRDRNRFHCFKDGACTCKDYW 466
S+I +REI++RD NRFH F+ G C+C DYW
Sbjct: 657 SQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 1/196 (0%)
Query: 12 TRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKC 71
T H+R++ + + +M A+ ++ V +AR +F +P+RNV +I
Sbjct: 60 TVHSRIILEDLRCNSSLGVKLMRAY-ASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 72 GMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVC 131
G E +KVF M +P+ T VL AC+ G + G+ +H A G ++V
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 132 NALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMK 191
N L+ MY KCG L E V + M R VVSW+S++VG+A + M V +
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 192 PNYVTFIGVLHACSHV 207
+ T +L A S+
Sbjct: 239 HDAGTMASLLPAVSNT 254
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 397 bits (1020), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/465 (42%), Positives = 288/465 (61%), Gaps = 1/465 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ LYA G +F+ +P D M+ G V AR LF MP+R+ +W
Sbjct: 149 LISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAW 208
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I G A+ G EAL VF M+ +G K N V +++VL AC QLG L+ G+ H + +
Sbjct: 209 NAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIER 268
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
N V + L+D+Y KCG +E+ VF GM E+ V +WSS + G AM+
Sbjct: 269 NKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLEL 328
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M + G+ PN VTF+ VL CS VG VD+G+ MR ++GI P +EHYGCLVDL +
Sbjct: 329 FSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYA 388
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RAGRLE+A +I M + P+ VW +LL R++KN+ L A + + +L+ N G YV+
Sbjct: 389 RAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVL 448
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
+SN+YA++ W+ VS +R+ MKS+GV+K PGCS + ++G VHEF GD++HP+ I +
Sbjct: 449 LSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAV 508
Query: 362 WEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMK 421
W+ + ++++ GY DT+ V+ D+ D ++KE L HSEK A+ +G+++ K + IRI+K
Sbjct: 509 WKDISRRLRLAGYKADTTPVMFDI-DEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVK 567
Query: 422 NLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
NLRVC DCH ++S+I NREI+VRDRNRFH FKDG C+C +W
Sbjct: 568 NLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/469 (42%), Positives = 292/469 (62%), Gaps = 5/469 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++ +Y C AR +FD+MP+RD+ +W +IA VG + A +LF S+P +++ +W
Sbjct: 190 MIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAW 249
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
T+++ G A+ +EAL+ F MEK G + +EVTV + ACAQLG ++ + A+
Sbjct: 250 TAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQK 309
Query: 122 NGFLRN--VYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
+G+ + V + +ALIDMY KCG +EE VF M + V ++SSMI+G A H
Sbjct: 310 SGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEAL 369
Query: 180 XXXXXMI-RVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVD 238
M+ + +KPN VTF+G L ACSH GLVD+GR + M + +G+ P +HY C+VD
Sbjct: 370 HLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVD 429
Query: 239 LLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY 298
LL R GRL+EA E+I MSV P+ VWGALLG CR+H N +AE A HL +L+ G
Sbjct: 430 LLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGN 489
Query: 299 YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCS-SITIDGVVHEFVAGDETHPQAKG 357
Y+++SNVYA AG W V R+R+L+K +G+KKTP S + +G +H+F G+ HP +
Sbjct: 490 YILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNK 549
Query: 358 IFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSI 417
I + E+L+ ++ + GY PD S V D+ D K + L +H+EKLAL + L+ T +I
Sbjct: 550 IQDKLEELVERLTVLGYQPDLSSVPYDVSD-NAKRLILIQHTEKLALAFSLLTTNRDSTI 608
Query: 418 RIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
IMKNLR+C DCH +L SE+ + I++RD RFH F+ G C+C D+W
Sbjct: 609 TIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 121/273 (44%), Gaps = 38/273 (13%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR + + RN WT+VI G A G +EA+ ++ M K+ P T A+L AC
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 106 LGDLEFGKSVH-RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVS--- 161
+ DL G+ H + + GF VYV N +IDMYVKC ++ +VF+ M ER V+S
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCF-VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTE 220
Query: 162 ----------------------------WSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPN 193
W++M+ GFA + M + G++ +
Sbjct: 221 LIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRAD 280
Query: 194 YVTFIGVLHACSHVGLVDKG-RALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV 252
VT G + AC+ +G RA+ + Y V L+D+ S+ G +EEA V
Sbjct: 281 EVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNV 340
Query: 253 IANMSVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
+M+ N + +++ G H A+EA+
Sbjct: 341 FMSMN-NKNVFTYSSMILGLATHGR---AQEAL 369
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 191/438 (43%), Positives = 288/438 (65%), Gaps = 3/438 (0%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N +I G + A LF +P ++V SW ++I G + +EAL +F EM + G
Sbjct: 305 NALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 364
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRF--AKGNGFLRNVYVCNALIDMYVKCGCLEEGY 148
PN+VT++++L ACA LG ++ G+ +H + + G + +LIDMY KCG +E +
Sbjct: 365 PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAH 424
Query: 149 RVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVG 208
+VF + +++ SW++MI GFAMH M ++G++P+ +TF+G+L ACSH G
Sbjct: 425 QVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSG 484
Query: 209 LVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGAL 268
++D GR + M +DY + P +EHYGC++DLL +G +EA E+I M + P+ V+W +L
Sbjct: 485 MLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSL 544
Query: 269 LGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVK 328
L C++H N+ L E +L K++ N G YV++SN+YA AG+W EV++ R L+ +G+K
Sbjct: 545 LKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMK 604
Query: 329 KTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDA 388
K PGCSSI ID VVHEF+ GD+ HP+ + I+ M E++ V ++ G++PDTS VL ++E+
Sbjct: 605 KVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEE- 663
Query: 389 KQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRD 448
+ KE L HSEKLA+ +GLI+TKPG + I+KNLRVC +CH A KL+S+I REI+ RD
Sbjct: 664 EWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARD 723
Query: 449 RNRFHCFKDGACTCKDYW 466
R RFH F+DG C+C DYW
Sbjct: 724 RTRFHHFRDGVCSCNDYW 741
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 178/332 (53%), Gaps = 4/332 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y G A +FDK P RD+ ++ +I + GY+ A+ LF +P ++V SW
Sbjct: 175 LISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSW 234
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I G A+ G +EAL++F +M K +P+E T+V V+ ACAQ G +E G+ VH +
Sbjct: 235 NAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDD 294
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+GF N+ + NALID+Y KCG LE +FE + + V+SW+++I G+
Sbjct: 295 HGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLL 354
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL-LTIMRRDYGIVPGVEHYGCLVDLL 240
M+R G PN VT + +L AC+H+G +D GR + + I +R G+ L+D+
Sbjct: 355 FQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 414
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLL-NDGYY 299
++ G +E A +V N + + W A++ G +H + + + K+ + +D +
Sbjct: 415 AKCGDIEAAHQVF-NSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITF 473
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTP 331
V + + + +G + I R M ++ K TP
Sbjct: 474 VGLLSACSHSGMLDLGRHIFRTM-TQDYKMTP 504
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 140/326 (42%), Gaps = 44/326 (13%)
Query: 3 LHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGA-------ARDLFSSMPQ 55
L L +C + R++ +M + + N ++ LI + A +F ++ +
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 56 RNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSV 115
N+ W ++ G A ALK++ M G PN T VL +CA+ + G+ +
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 116 HRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER------------------ 157
H G ++YV +LI MYV+ G LE+ ++VF+ R
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216
Query: 158 -------------TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHAC 204
VVSW++MI G+A M++ ++P+ T + V+ AC
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276
Query: 205 SHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV 264
+ G ++ GR + + D+G ++ L+DL S+ G LE A + + + +
Sbjct: 277 AQSGSIELGRQ-VHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY-KDVIS 334
Query: 265 WGALLGG---CRLHKN-IVLAEEAMR 286
W L+GG L+K ++L +E +R
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLR 360
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 394 bits (1012), Expect = e-110, Method: Compositional matrix adjust.
Identities = 186/424 (43%), Positives = 265/424 (62%), Gaps = 1/424 (0%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
+ +AR LF P++++ SW ++I G + G+ E+A+ +F EM+K PN VT+ +L A
Sbjct: 370 IESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSA 429
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
CAQLG L GK VH + F ++YV ALI MY KCG + E R+F+ M ++ V+W
Sbjct: 430 CAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTW 489
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR 222
++MI G+ +H M+ G+ P VTF+ VL+ACSH GLV +G + M
Sbjct: 490 NTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIH 549
Query: 223 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAE 282
YG P V+HY C+VD+L RAG L+ A + I MS+ P VW LLG CR+HK+ LA
Sbjct: 550 RYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLAR 609
Query: 283 EAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVV 342
L +LD N GY+V++SN+++ + + + +R+ K R + K PG + I I
Sbjct: 610 TVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETP 669
Query: 343 HEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKL 402
H F +GD++HPQ K I+E EKL KM+ GY P+T + L D+E+ +++E+ + HSE+L
Sbjct: 670 HVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEE-EERELMVKVHSERL 728
Query: 403 ALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTC 462
A+ +GLI T+PG IRI+KNLRVC DCH KL+S+I R IVVRD NRFH FKDG C+C
Sbjct: 729 AIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSC 788
Query: 463 KDYW 466
DYW
Sbjct: 789 GDYW 792
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 117/257 (45%), Gaps = 10/257 (3%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + LF + ++ ++ ++I+G G E +L +F E+ G++ T+V+++
Sbjct: 270 GKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLV 329
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
G L ++H + + FL + V AL +Y K +E ++F+ E+++
Sbjct: 330 PVS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLP 386
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
SW++MI G+ + M + PN VT +L AC+ +G + G+ + ++
Sbjct: 387 SWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLV 446
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
R + L+ + ++ G + EAR + ++ N V W ++ G LH
Sbjct: 447 RST-DFESSIYVSTALIGMYAKCGSIAEARRLF-DLMTKKNEVTWNTMISGYGLHGQ--- 501
Query: 281 AEEAMRHLSKLDLLNDG 297
+EA+ ++LN G
Sbjct: 502 GQEALNIF--YEMLNSG 516
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 84/169 (49%), Gaps = 1/169 (0%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDG-SKPNEVTVVAVLV 101
V AR +F MP+++ W ++I G K M E+++VF ++ + ++ + T++ +L
Sbjct: 170 VEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILP 229
Query: 102 ACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVS 161
A A+L +L G +H A G + YV I +Y KCG ++ G +F R+ +V+
Sbjct: 230 AVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVA 289
Query: 162 WSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
+++MI G+ + ++ G + T + ++ H+ L+
Sbjct: 290 YNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI 338
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 14/157 (8%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ I +I G + AR LF M ++N +W ++I G G +EAL +F E
Sbjct: 452 ESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYE 511
Query: 84 MEKDGSKPNEVTVVAVLVACAQL-----GDLEFGKSVHRFAKGNGFLRNV--YVCNALID 136
M G P VT + VL AC+ GD F +HR+ GF +V Y C ++D
Sbjct: 512 MLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRY----GFEPSVKHYAC--MVD 565
Query: 137 MYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMH 172
+ + G L+ + E M E W +++ +H
Sbjct: 566 ILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIH 602
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 78/157 (49%), Gaps = 2/157 (1%)
Query: 14 HARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGM 73
HA+++ + DI+ + L ++G + ARD+F S+ + +V + ++ G +
Sbjct: 40 HAQIILHGF-RNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNES 98
Query: 74 CEEALKVFSEMEKDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCN 132
+L VF+ + K KPN T + A + D G+ +H A +G + + +
Sbjct: 99 PHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGS 158
Query: 133 ALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGF 169
++ MY K +E+ +VF+ M E+ + W++MI G+
Sbjct: 159 NIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGY 195
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/471 (42%), Positives = 292/471 (61%), Gaps = 7/471 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +YA G AR F KM R++ M++ G + A+ +F ++++ W
Sbjct: 253 LVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCW 312
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
T++I + +EAL+VF EM G KP+ V++ +V+ ACA LG L+ K VH
Sbjct: 313 TTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHV 372
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
NG + + NALI+MY KCG L+ VFE M R VVSWSSMI +MH
Sbjct: 373 NGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSL 432
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M + ++PN VTF+GVL+ CSH GLV++G+ + M +Y I P +EHYGC+VDL
Sbjct: 433 FARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFG 492
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RA L EA EVI +M V N V+WG+L+ CR+H + L + A + + +L+ +DG V+
Sbjct: 493 RANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVL 552
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
MSN+YA +WE+V IRR+M+ + V K G S I +G HEF+ GD+ H Q+ I+
Sbjct: 553 MSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAK 612
Query: 362 WEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMS----- 416
++++ K+K+ GY+PD VL+D+E+ ++K++ L+ HSEKLAL +GL+N +
Sbjct: 613 LDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLW-HSEKLALCFGLMNEEKEEEKDSCG 671
Query: 417 -IRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
IRI+KNLRVCEDCH FKLVS++ REI+VRDR RFHC+K+G C+C+DYW
Sbjct: 672 VIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 131/278 (47%), Gaps = 10/278 (3%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS- 60
+ +YASCG +AR +FD+M RD+ TWN MI G V A LF M NV
Sbjct: 152 FMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPD 211
Query: 61 ---WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
+++ + G ++ + ++ + + + A++ A G ++ + R
Sbjct: 212 EMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFR 271
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
+RN++V A++ Y KCG L++ +F+ ++ +V W++MI +
Sbjct: 272 KMS----VRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQE 327
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
M G+KP+ V+ V+ AC+++G++DK + + + + + G+ + L+
Sbjct: 328 ALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVN-GLESELSINNALI 386
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
++ ++ G L+ R+V M N V W +++ +H
Sbjct: 387 NMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMH 423
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 118/289 (40%), Gaps = 16/289 (5%)
Query: 46 ARDLFSSMPQRNVR-SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACA 104
A ++FSS+P + + L++ + + + G + ++ + + +L A +
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 105 QLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSS 164
++ L G +H A L + +V +DMY CG + VF+ M R VV+W++
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 165 MIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM---- 220
MI + M + P+ + ++ AC G + RA+ +
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242
Query: 221 -RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIV 279
R D ++ LV + + AG ++ ARE MSV N V A++ G +
Sbjct: 243 VRMDTHLLTA------LVTMYAGAGCMDMAREFFRKMSV-RNLFVSTAMVSGYSKCGRLD 295
Query: 280 LAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVK 328
A+ K DL+ + M + Y E+ +E R+ M G+K
Sbjct: 296 DAQVIFDQTEKKDLV---CWTTMISAYVESDYPQEALRVFEEMCCSGIK 341
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/465 (40%), Positives = 284/465 (61%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ LY CG+ AR +F+KMP +D+ +WN +++ ++ G++G A+ +F M ++N+ SW
Sbjct: 326 LVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSW 385
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+I GLA+ G EE LK+FS M+++G +P + + +CA LG G+ H
Sbjct: 386 MIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLK 445
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
GF ++ NALI MY KCG +EE +VF M VSW+++I H
Sbjct: 446 IGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDV 505
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M++ G++P+ +T + VL ACSH GLVD+GR M Y I PG +HY L+DLL
Sbjct: 506 YEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLC 565
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
R+G+ +A VI ++ P +W ALL GCR+H N+ L A L L +DG Y++
Sbjct: 566 RSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYML 625
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
+SN++A G+WEEV+R+R+LM+ RGVKK CS I ++ VH F+ D +HP+A+ ++
Sbjct: 626 LSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIY 685
Query: 362 WEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMK 421
+ L +M+ GY+PDTS VL D+E KE L HSEK+A+ +GL+ PG +IRI K
Sbjct: 686 LQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFK 745
Query: 422 NLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
NLR C DCH F+ +S + R+I++RDR RFH F++G C+C ++W
Sbjct: 746 NLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 130/309 (42%), Gaps = 37/309 (11%)
Query: 2 LLHLYASCGET----RHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQR- 56
L+ +Y+ C + AR +FD++ ++D +W M+ + GY +L M
Sbjct: 190 LVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNM 249
Query: 57 NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH 116
+ ++ ++I G G +EAL++ M G + +E T +V+ ACA G L+ GK VH
Sbjct: 250 KLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVH 309
Query: 117 ---------RFAKGNGFLRNVYVC---------------------NALIDMYVKCGCLEE 146
F N + Y C NAL+ YV G + E
Sbjct: 310 AYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGE 369
Query: 147 GYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSH 206
+F+ M+E+ ++SW MI G A + M R G +P F G + +C+
Sbjct: 370 AKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAV 429
Query: 207 VGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWG 266
+G G+ + + G + L+ + ++ G +EEAR+V M + V W
Sbjct: 430 LGAYCNGQQYHAQLLK-IGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWN 487
Query: 267 ALLGGCRLH 275
AL+ H
Sbjct: 488 ALIAALGQH 496
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 168/401 (41%), Gaps = 61/401 (15%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMP--QRNVR 59
L+ +Y E +AR +FD++ + D M++ G + AR +F P R+
Sbjct: 55 LIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTV 114
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRF- 118
+ ++I G + A+ +F +M+ +G KP+ T +VL A + D E K +F
Sbjct: 115 MYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDE--KQCVQFH 172
Query: 119 ----AKGNGFLRNVYVCNALIDMYVKC--------------------------------- 141
G G++ + V NAL+ +Y KC
Sbjct: 173 AAALKSGAGYITS--VSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYV 230
Query: 142 --GCLEEGYRVFEGMRER-TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFI 198
G + G + EGM + +V++++MI G+ M+ G++ + T+
Sbjct: 231 KNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYP 290
Query: 199 GVLHACSHVGLVDKGRAL--LTIMRRDYGIVPGVEHY-GCLVDLLSRAGRLEEAREVIAN 255
V+ AC+ GL+ G+ + + R D+ H+ LV L + G+ +EAR +
Sbjct: 291 SVIRACATAGLLQLGKQVHAYVLRREDFSF-----HFDNSLVSLYYKCGKFDEARAIFEK 345
Query: 256 MSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEV 315
M + V W ALL G +I A+ + + + ++L+ +++M + AE G EE
Sbjct: 346 MPA-KDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILS---WMIMISGLAENGFGEEG 401
Query: 316 SRIRRLMKSRGVKKTPGCSSITID--GVVHEFVAGDETHPQ 354
++ MK G + S I V+ + G + H Q
Sbjct: 402 LKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQ 442
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/454 (43%), Positives = 292/454 (64%), Gaps = 3/454 (0%)
Query: 15 ARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMC 74
AR +FDKM R+ +WN+M+A I G + +A+ +FS MP R+ SW+++I G+A G
Sbjct: 191 AREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSF 250
Query: 75 EEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNAL 134
E+ F E+++ G PNEV++ VL AC+Q G EFGK +H F + G+ V V NAL
Sbjct: 251 NESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNAL 310
Query: 135 IDMYVKCGCLEEGYRVFEGMRE-RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPN 193
IDMY +CG + VFEGM+E R +VSW+SMI G AMH M G+ P+
Sbjct: 311 IDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPD 370
Query: 194 YVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVI 253
++FI +LHACSH GL+++G + M+R Y I P +EHYGC+VDL R+G+L++A + I
Sbjct: 371 GISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFI 430
Query: 254 ANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWE 313
M +PP +VW LLG C H NI LAE+ + L++LD N G V++SN YA AGKW+
Sbjct: 431 CQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWK 490
Query: 314 EVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMK- 372
+V+ IR+ M + +KKT S + + +++F AG++ E +++++++K +
Sbjct: 491 DVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEA 550
Query: 373 GYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAA 432
GY P+ + L D+E+ ++KE + +HSEKLAL + L G +IRI+KNLR+C DCHA
Sbjct: 551 GYTPEVASALYDVEE-EEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAV 609
Query: 433 FKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
KL S++ EI+VRDRNRFH FKDG+C+C+DYW
Sbjct: 610 MKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK-PNEVTVVAVLVACA 104
AR L P+ + + +++ G ++ ++ VF EM + G P+ + V+ A
Sbjct: 58 ARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVE 117
Query: 105 QLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSS 164
L G +H A +G +++V LI MY CGC+E +VF+ M + +V+W++
Sbjct: 118 NFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNA 177
Query: 165 MIVG 168
+I
Sbjct: 178 VITA 181
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 390 bits (1003), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/466 (40%), Positives = 288/466 (61%), Gaps = 2/466 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y C A +FD+M + + TWN ++A + G V AA + F +MP++N+ SW
Sbjct: 378 LIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSW 437
Query: 62 TSVIYGLAKCGMCEEALKVFSEME-KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
++I GL + + EEA++VF M+ ++G + VT++++ AC LG L+ K ++ + +
Sbjct: 438 NTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE 497
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
NG +V + L+DM+ +CG E +F + R V +W++ I AM
Sbjct: 498 KNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIE 557
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
MI G+KP+ V F+G L ACSH GLV +G+ + M + +G+ P HYGC+VDLL
Sbjct: 558 LFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLL 617
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYV 300
RAG LEEA ++I +M + PN V+W +LL CR+ N+ +A A + L G YV
Sbjct: 618 GRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYV 677
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFE 360
++SNVYA AG+W +++++R MK +G++K PG SSI I G HEF +GDE+HP+ I
Sbjct: 678 LLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEA 737
Query: 361 MWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIM 420
M +++ + G++PD S VL+D+ D K+K L RHSEKLA+ YGLI++ G +IRI+
Sbjct: 738 MLDEVSQRASHLGHVPDLSNVLMDV-DEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIV 796
Query: 421 KNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
KNLRVC DCH+ K S++ NREI++RD NRFH + G C+C D+W
Sbjct: 797 KNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 124/252 (49%), Gaps = 11/252 (4%)
Query: 25 RDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM 84
+D+ N ++ G + +AR +F M +RNV SWTS+I G A+ ++A+ +F M
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 85 EKDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
+D PN VT+V V+ ACA+L DLE G+ V+ F + +G N + +AL+DMY+KC
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA 286
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
++ R+F+ + ++M + M+ G++P+ ++ + + +
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISS 346
Query: 204 CSHVGLVDKGRALLTIMRRDYGIVPGVEHY----GCLVDLLSRAGRLEEAREVIANMSVP 259
CS + + G++ Y + G E + L+D+ + R + A + MS
Sbjct: 347 CSQLRNILWGKSC-----HGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS-N 400
Query: 260 PNRVVWGALLGG 271
V W +++ G
Sbjct: 401 KTVVTWNSIVAG 412
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 143/331 (43%), Gaps = 43/331 (12%)
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
+ S+I G A G+C EA+ +F M G P++ T L ACA+ G +H
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
G+ ++++V N+L+ Y +CG L+ +VF+ M ER VVSW+SMI G+A
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 181 XXXXMIR-VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M+R + PN VT + V+ AC+ + ++ G + + R+ GI LVD+
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI-RNSGIEVNDLMVSALVDM 280
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY 299
+ ++ A+ + +GA S LDL N
Sbjct: 281 YMKCNAIDVAKRLFDE---------YGA---------------------SNLDLCN---- 306
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVK--KTPGCSSITIDGVVHEFVAGDETHPQA-K 356
M++ Y G E + LM GV+ + S+I+ + + G H +
Sbjct: 307 -AMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 357 GIFEMWEKL---LVKMKMKGYIPDTSVVLLD 384
FE W+ + L+ M MK + DT+ + D
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFD 396
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 124/263 (47%), Gaps = 37/263 (14%)
Query: 31 NIMIAHLINV----GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEK 86
++M++ L+++ + A+ LF N+ ++ + G+ EAL VF+ M
Sbjct: 271 DLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMD 330
Query: 87 DGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEE 146
G +P+ +++++ + +C+QL ++ +GKS H + NGF +CNALIDMY+KC +
Sbjct: 331 SGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDT 390
Query: 147 GYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM--------------------- 185
+R+F+ M +TVV+W+S++ G+ + M
Sbjct: 391 AFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLF 450
Query: 186 ---IRV--------GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYG 234
I V G+ + VT + + AC H+G +D + + + ++ GI V
Sbjct: 451 EEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLDVRLGT 509
Query: 235 CLVDLLSRAGRLEEAREVIANMS 257
LVD+ SR G E A + +++
Sbjct: 510 TLVDMFSRCGDPESAMSIFNSLT 532
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/466 (41%), Positives = 291/466 (62%), Gaps = 33/466 (7%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LLHLYA+CG+ A +FDKMP++D+ WN
Sbjct: 162 LLHLYANCGDVASAYKVFDKMPEKDLVAWN------------------------------ 191
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
SVI G A+ G EEAL +++EM G KP+ T+V++L ACA++G L GK VH +
Sbjct: 192 -SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
G RN++ N L+D+Y +CG +EE +F+ M ++ VSW+S+IVG A++
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 310
Query: 182 XXXMIRV-GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M G+ P +TF+G+L+ACSH G+V +G MR +Y I P +EH+GC+VDLL
Sbjct: 311 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 370
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYV 300
+RAG++++A E I +M + PN V+W LLG C +H + LAE A + +L+ + G YV
Sbjct: 371 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYV 430
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFE 360
++SN+YA +W +V +IR+ M GVKK PG S + + VHEF+ GD++HPQ+ I+
Sbjct: 431 LLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYA 490
Query: 361 MWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIM 420
+++ +++ +GY+P S V +D+E+ +++ +Y HSEK+A+ + LI+T I ++
Sbjct: 491 KLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVY-HSEKIAIAFMLISTPERSPITVV 549
Query: 421 KNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
KNLRVC DCH A KLVS++ NREIVVRDR+RFH FK+G+C+C+DYW
Sbjct: 550 KNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 119/228 (52%), Gaps = 4/228 (1%)
Query: 46 ARDLFSSMPQR-NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDG-SKPNEVTVVAVLVAC 103
A +FS + + NV W ++I G A+ G A ++ EM G +P+ T ++ A
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 104 AQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWS 163
+ D+ G+++H +GF +YV N+L+ +Y CG + Y+VF+ M E+ +V+W+
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 164 SMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRD 223
S+I GFA + M G+KP+ T + +L AC+ +G + G+ + M +
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK- 250
Query: 224 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
G+ + L+DL +R GR+EEA+ + M V N V W +L+ G
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVG 297
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 34/175 (19%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS 60
+LL LYA CG A+ +FD+M ++ +W
Sbjct: 262 VLLDLYARCGRVEEAKTLFDEMVDKNSVSW------------------------------ 291
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEK-DGSKPNEVTVVAVLVACAQLGDLEFG-KSVHRF 118
TS+I GLA G +EA+++F ME +G P E+T V +L AC+ G ++ G + R
Sbjct: 292 -TSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRM 350
Query: 119 AKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMH 172
+ + ++D+ + G +++ Y + M + VV W +++ +H
Sbjct: 351 REEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH 405
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 387 bits (994), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/466 (41%), Positives = 291/466 (62%), Gaps = 33/466 (7%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LLHLYA+CG+ A +FDKMP++D+ WN
Sbjct: 29 LLHLYANCGDVASAYKVFDKMPEKDLVAWN------------------------------ 58
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
SVI G A+ G EEAL +++EM G KP+ T+V++L ACA++G L GK VH +
Sbjct: 59 -SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 117
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
G RN++ N L+D+Y +CG +EE +F+ M ++ VSW+S+IVG A++
Sbjct: 118 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 177
Query: 182 XXXMIRV-GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M G+ P +TF+G+L+ACSH G+V +G MR +Y I P +EH+GC+VDLL
Sbjct: 178 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 237
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYV 300
+RAG++++A E I +M + PN V+W LLG C +H + LAE A + +L+ + G YV
Sbjct: 238 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYV 297
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFE 360
++SN+YA +W +V +IR+ M GVKK PG S + + VHEF+ GD++HPQ+ I+
Sbjct: 298 LLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYA 357
Query: 361 MWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIM 420
+++ +++ +GY+P S V +D+E+ +++ +Y HSEK+A+ + LI+T I ++
Sbjct: 358 KLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVY-HSEKIAIAFMLISTPERSPITVV 416
Query: 421 KNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
KNLRVC DCH A KLVS++ NREIVVRDR+RFH FK+G+C+C+DYW
Sbjct: 417 KNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 90/166 (54%), Gaps = 2/166 (1%)
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
+ D+ G+++H +GF +YV N+L+ +Y CG + Y+VF+ M E+ +V+W+S+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
I GFA + M G+KP+ T + +L AC+ +G + G+ + M + G
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VG 119
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ + L+DL +R GR+EEA+ + M V N V W +L+ G
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVG 164
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 34/175 (19%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS 60
+LL LYA CG A+ +FD+M ++ +W
Sbjct: 129 VLLDLYARCGRVEEAKTLFDEMVDKNSVSW------------------------------ 158
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEK-DGSKPNEVTVVAVLVACAQLGDLEFG-KSVHRF 118
TS+I GLA G +EA+++F ME +G P E+T V +L AC+ G ++ G + R
Sbjct: 159 -TSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRM 217
Query: 119 AKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMH 172
+ + ++D+ + G +++ Y + M + VV W +++ +H
Sbjct: 218 REEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH 272
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 386 bits (991), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/465 (40%), Positives = 287/465 (61%), Gaps = 2/465 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y C A +FD+M + + TWN ++A + G V AA + F +MP++N+ SW
Sbjct: 378 LIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSW 437
Query: 62 TSVIYGLAKCGMCEEALKVFSEME-KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
++I GL + + EEA++VF M+ ++G + VT++++ AC LG L+ K ++ + +
Sbjct: 438 NTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE 497
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
NG +V + L+DM+ +CG E +F + R V +W++ I AM
Sbjct: 498 KNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIE 557
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
MI G+KP+ V F+G L ACSH GLV +G+ + M + +G+ P HYGC+VDLL
Sbjct: 558 LFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLL 617
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYV 300
RAG LEEA ++I +M + PN V+W +LL CR+ N+ +A A + L G YV
Sbjct: 618 GRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYV 677
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFE 360
++SNVYA AG+W +++++R MK +G++K PG SSI I G HEF +GDE+HP+ I
Sbjct: 678 LLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEA 737
Query: 361 MWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIM 420
M +++ + G++PD S VL+D+ D K+K L RHSEKLA+ YGLI++ G +IRI+
Sbjct: 738 MLDEVSQRASHLGHVPDLSNVLMDV-DEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIV 796
Query: 421 KNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDY 465
KNLRVC DCH+ K S++ NREI++RD NRFH + G C+C D+
Sbjct: 797 KNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 124/252 (49%), Gaps = 11/252 (4%)
Query: 25 RDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM 84
+D+ N ++ G + +AR +F M +RNV SWTS+I G A+ ++A+ +F M
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 85 EKDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
+D PN VT+V V+ ACA+L DLE G+ V+ F + +G N + +AL+DMY+KC
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA 286
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
++ R+F+ + ++M + M+ G++P+ ++ + + +
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISS 346
Query: 204 CSHVGLVDKGRALLTIMRRDYGIVPGVEHY----GCLVDLLSRAGRLEEAREVIANMSVP 259
CS + + G++ Y + G E + L+D+ + R + A + MS
Sbjct: 347 CSQLRNILWGKSC-----HGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS-N 400
Query: 260 PNRVVWGALLGG 271
V W +++ G
Sbjct: 401 KTVVTWNSIVAG 412
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 160/372 (43%), Gaps = 47/372 (12%)
Query: 24 QRDIATWNIMIAHLINVGY---VGAARDLF-SSMPQRNVRSWTSVIYGLAKCGMCEEALK 79
D++T ++A +G + A+++F +S + S+I G A G+C EA+
Sbjct: 61 DNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAIL 120
Query: 80 VFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYV 139
+F M G P++ T L ACA+ G +H G+ ++++V N+L+ Y
Sbjct: 121 LFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYA 180
Query: 140 KCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR-VGMKPNYVTFI 198
+CG L+ +VF+ M ER VVSW+SMI G+A M+R + PN VT +
Sbjct: 181 ECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMV 240
Query: 199 GVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSV 258
V+ AC+ + ++ G + + R+ GI LVD+ + ++ A+ +
Sbjct: 241 CVISACAKLEDLETGEKVYAFI-RNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDE--- 296
Query: 259 PPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRI 318
+GA S LDL N M++ Y G E +
Sbjct: 297 ------YGA---------------------SNLDLCN-----AMASNYVRQGLTREALGV 324
Query: 319 RRLMKSRGVK--KTPGCSSITIDGVVHEFVAGDETHPQA-KGIFEMWEKL---LVKMKMK 372
LM GV+ + S+I+ + + G H + FE W+ + L+ M MK
Sbjct: 325 FNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMK 384
Query: 373 GYIPDTSVVLLD 384
+ DT+ + D
Sbjct: 385 CHRQDTAFRIFD 396
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 124/263 (47%), Gaps = 37/263 (14%)
Query: 31 NIMIAHLINV----GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEK 86
++M++ L+++ + A+ LF N+ ++ + G+ EAL VF+ M
Sbjct: 271 DLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMD 330
Query: 87 DGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEE 146
G +P+ +++++ + +C+QL ++ +GKS H + NGF +CNALIDMY+KC +
Sbjct: 331 SGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDT 390
Query: 147 GYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM--------------------- 185
+R+F+ M +TVV+W+S++ G+ + M
Sbjct: 391 AFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLF 450
Query: 186 ---IRV--------GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYG 234
I V G+ + VT + + AC H+G +D + + + ++ GI V
Sbjct: 451 EEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLDVRLGT 509
Query: 235 CLVDLLSRAGRLEEAREVIANMS 257
LVD+ SR G E A + +++
Sbjct: 510 TLVDMFSRCGDPESAMSIFNSLT 532
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/469 (41%), Positives = 281/469 (59%), Gaps = 5/469 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQR----N 57
++ +Y G +F++ + N I L G V A ++F ++ N
Sbjct: 293 MIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELN 352
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
V SWTS+I G A+ G EAL++F EM+ G KPN VT+ ++L AC + L G+S H
Sbjct: 353 VVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHG 412
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
FA L NV+V +ALIDMY KCG + VF M + +V W+S++ GF+MH
Sbjct: 413 FAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKE 472
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
++R +KP++++F +L AC VGL D+G +M +YGI P +EHY C+V
Sbjct: 473 VMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMV 532
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG 297
+LL RAG+L+EA ++I M P+ VWGALL CRL N+ LAE A L L+ N G
Sbjct: 533 NLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPG 592
Query: 298 YYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKG 357
YV++SN+YA G W EV IR M+S G+KK PGCS I + V+ +AGD++HPQ
Sbjct: 593 TYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQ 652
Query: 358 IFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSI 417
I E +++ +M+ G+ P+ L D+E+ +Q+++ L+ HSEKLA+V+GL+NT G +
Sbjct: 653 ITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQM-LWGHSEKLAVVFGLLNTPDGTPL 711
Query: 418 RIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
+++KNLR+C DCHA K +S REI +RD NRFH FKDG C+C D+W
Sbjct: 712 QVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 152/337 (45%), Gaps = 45/337 (13%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMP----QRN 57
+ H+Y CG AR +FD+M +D+ T + ++ G + + S M + N
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
+ SW ++ G + G +EA+ +F ++ G P++VTV +VL + L G+ +H
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHG 276
Query: 118 FAKGNGFLRNVYVCNALIDMYVKC-------------------------------GCLEE 146
+ G L++ V +A+IDMY K G +++
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDK 336
Query: 147 GYRVFEGMRERT----VVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLH 202
+FE +E+T VVSW+S+I G A + M G+KPN+VT +L
Sbjct: 337 ALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLP 396
Query: 203 ACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR 262
AC ++ + GR+ R + ++ V L+D+ ++ GR+ + +++ NM N
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVH-LLDNVHVGSALIDMYAKCGRINLS-QIVFNMMPTKNL 454
Query: 263 VVWGALLGGCRLHKN----IVLAEEAMRHLSKLDLLN 295
V W +L+ G +H + + E MR K D ++
Sbjct: 455 VCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFIS 491
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 1/195 (0%)
Query: 14 HARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGM 73
HAR++ Q D +IA N A + S+P + S++S+IY L K +
Sbjct: 38 HARIL-KSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKL 96
Query: 74 CEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNA 133
+++ VFS M G P+ + + CA+L + GK +H + +G + +V +
Sbjct: 97 FTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGS 156
Query: 134 LIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPN 193
+ MY++CG + + +VF+ M ++ VV+ S+++ +A M G++ N
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 194 YVTFIGVLHACSHVG 208
V++ G+L + G
Sbjct: 217 IVSWNGILSGFNRSG 231
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 384 bits (986), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/424 (43%), Positives = 273/424 (64%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
V +AR +F + + V + ++I G A+ EAL +F EM+ KPNE+T+++VL +
Sbjct: 180 VDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSS 239
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
CA LG L+ GK +H++AK + F + V V ALIDM+ KCG L++ +FE MR + +W
Sbjct: 240 CALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAW 299
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR 222
S+MIV +A H M ++P+ +TF+G+L+ACSH G V++GR + M
Sbjct: 300 SAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVS 359
Query: 223 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAE 282
+GIVP ++HYG +VDLLSRAG LE+A E I + + P ++W LL C H N+ LAE
Sbjct: 360 KFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAE 419
Query: 283 EAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVV 342
+ + +LD + G YV++SN+YA KWE V +R++MK R K PGCSSI ++ VV
Sbjct: 420 KVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVV 479
Query: 343 HEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKL 402
HEF +GD + ++++ ++K+ GY+PDTS+V+ + ++KEI L HSEKL
Sbjct: 480 HEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKL 539
Query: 403 ALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTC 462
A+ +GL+NT PG +IR++KNLRVC DCH A KL+S I R++V+RD RFH F+DG C+C
Sbjct: 540 AITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSC 599
Query: 463 KDYW 466
D+W
Sbjct: 600 GDFW 603
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 118/244 (48%), Gaps = 9/244 (3%)
Query: 33 MIAHLINV-------GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
+A LIN + AR LF +M + ++ + S+ G ++ E +F E+
Sbjct: 62 FVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEIL 121
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
+DG P+ T ++L ACA LE G+ +H + G NVYVC LI+MY +C ++
Sbjct: 122 EDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVD 181
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
VF+ + E VV +++MI G+A M +KPN +T + VL +C+
Sbjct: 182 SARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCA 241
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
+G +D G+ + ++ + V+ L+D+ ++ G L++A + M + W
Sbjct: 242 LLGSLDLGKWIHKYAKK-HSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQ-AW 299
Query: 266 GALL 269
A++
Sbjct: 300 SAMI 303
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 69/142 (48%), Gaps = 2/142 (1%)
Query: 33 MIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPN 92
+I G + A +F M ++ ++W+++I A G E+++ +F M + +P+
Sbjct: 271 LIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPD 330
Query: 93 EVTVVAVLVACAQLGDLEFG-KSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVF 151
E+T + +L AC+ G +E G K + G + ++ +++D+ + G LE+ Y
Sbjct: 331 EITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFI 390
Query: 152 EGMR-ERTVVSWSSMIVGFAMH 172
+ + T + W ++ + H
Sbjct: 391 DKLPISPTPMLWRILLAACSSH 412
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 384 bits (986), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/428 (47%), Positives = 270/428 (63%), Gaps = 3/428 (0%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM--EKDGSKPNEVTVVA 98
G V A +F MP RNV SW+++I AK G EAL+ F EM E S PN VT+V+
Sbjct: 231 GCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVS 290
Query: 99 VLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERT 158
VL ACA L LE GK +H + G + V +AL+ MY +CG LE G RVF+ M +R
Sbjct: 291 VLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRD 350
Query: 159 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT 218
VVSW+S+I + +H M+ G P VTF+ VL ACSH GLV++G+ L
Sbjct: 351 VVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFE 410
Query: 219 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNI 278
M RD+GI P +EHY C+VDLL RA RL+EA +++ +M P VWG+LLG CR+H N+
Sbjct: 411 TMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNV 470
Query: 279 VLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITI 338
LAE A R L L+ N G YV+++++YAEA W+EV R+++L++ RG++K PG + +
Sbjct: 471 ELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEV 530
Query: 339 DGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRH 398
++ FV+ DE +P + I KL MK KGYIP T VL +LE ++KE + H
Sbjct: 531 RRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELE-TEEKERIVLGH 589
Query: 399 SEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDG 458
SEKLAL +GLINT G IRI KNLR+CEDCH K +S+ +EI+VRD NRFH FK+G
Sbjct: 590 SEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNG 649
Query: 459 ACTCKDYW 466
C+C DYW
Sbjct: 650 VCSCGDYW 657
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 130/282 (46%), Gaps = 16/282 (5%)
Query: 16 RLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCE 75
R + D +D +I ++G V AR +F +R + W ++ L G E
Sbjct: 101 RHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGE 160
Query: 76 EALKVFSEMEKDGSKPNEVTVVAVLVACA----QLGDLEFGKSVHRFAKGNGFLRNVYVC 131
E L ++ +M + G + + T VL AC + L GK +H G+ +VY+
Sbjct: 161 EVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIM 220
Query: 132 NALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR--VG 189
L+DMY + GC++ VF GM R VVSWS+MI +A + M+R
Sbjct: 221 TTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKD 280
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALL-TIMRRDY-GIVPGVEHYGCLVDLLSRAGRLE 247
PN VT + VL AC+ + +++G+ + I+RR I+P + LV + R G+LE
Sbjct: 281 SSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI---SALVTMYGRCGKLE 337
Query: 248 EAREVIANMSVPPNRVVWGALLGGCRLH----KNIVLAEEAM 285
+ V M + V W +L+ +H K I + EE +
Sbjct: 338 VGQRVFDRMH-DRDVVSWNSLISSYGVHGYGKKAIQIFEEML 378
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 10/215 (4%)
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
S +I L K G ++A++V S+ S P++ T +++ C L VHR
Sbjct: 48 SNNQLIQSLCKEGKLKQAIRVLSQ----ESSPSQQTYELLILCCGHRSSLSDALRVHRHI 103
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
NG ++ ++ LI MY G ++ +VF+ R+RT+ W+++ +
Sbjct: 104 LDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVL 163
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHAC----SHVGLVDKGRALLTIMRRDYGIVPGVEHYGC 235
M R+G++ + T+ VL AC V + KG+ + + R G V
Sbjct: 164 GLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRR-GYSSHVYIMTT 222
Query: 236 LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
LVD+ +R G ++ A V M V N V W A++
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPV-RNVVSWSAMIA 256
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/442 (42%), Positives = 276/442 (62%), Gaps = 2/442 (0%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
DI N ++ +G V +AR +F+ +P +V SW ++I G A+ G EA+++++ ME
Sbjct: 383 DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIME 442
Query: 86 KDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCL 144
++G N+ T V+VL AC+Q G L G +H NG +V+V +L DMY KCG L
Sbjct: 443 EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRL 502
Query: 145 EEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHAC 204
E+ +F + V W+++I H M+ G+KP+++TF+ +L AC
Sbjct: 503 EDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSAC 562
Query: 205 SHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV 264
SH GLVD+G+ +M+ DYGI P ++HYGC+VD+ RAG+LE A + I +MS+ P+ +
Sbjct: 563 SHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASI 622
Query: 265 WGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKS 324
WGALL CR+H N+ L + A HL +++ + GY+V++SN+YA AGKWE V IR +
Sbjct: 623 WGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHG 682
Query: 325 RGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLD 384
+G++KTPG SS+ +D V F G++THP + ++ L K+KM GY+PD VL D
Sbjct: 683 KGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQD 742
Query: 385 LEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREI 444
+ED +KE L HSE+LA+ + LI T +IRI KNLRVC DCH+ K +S+I REI
Sbjct: 743 VED-DEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREI 801
Query: 445 VVRDRNRFHCFKDGACTCKDYW 466
+VRD NRFH FK+G C+C DYW
Sbjct: 802 IVRDSNRFHHFKNGVCSCGDYW 823
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 147/306 (48%), Gaps = 19/306 (6%)
Query: 30 WNIMIA----HLIN-VGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM 84
W++ +A HL + VG AR LF MP R++ SW ++I G + G +EAL + + +
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL 242
Query: 85 EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCL 144
S VTVV++L AC + GD G ++H ++ +G ++V N LID+Y + G L
Sbjct: 243 RAMDS----VTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRL 298
Query: 145 EEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHAC 204
+ +VF+ M R ++SW+S+I + ++ M ++P+ +T I +
Sbjct: 299 RDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASIL 358
Query: 205 SHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV 264
S +G + R++ R + + +V + ++ G ++ AR V N + +
Sbjct: 359 SQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVF-NWLPNTDVIS 417
Query: 265 WGALLGGCRLHKNIVLAEEAMRHLSKLD-----LLNDGYYVVMSNVYAEAGKWEEVSRIR 319
W ++ G + A EA+ + ++ N G +V + ++AG + ++
Sbjct: 418 WNTIISG---YAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLH 474
Query: 320 -RLMKS 324
RL+K+
Sbjct: 475 GRLLKN 480
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 131/287 (45%), Gaps = 37/287 (12%)
Query: 14 HARLMFDKMPQRDIATWNIMI-AHLINV----GYVGAARDLFSSMPQRNVRSWTSVIYGL 68
HARL+ K Q N+ I A L+N+ G V AR F + R+V +W +I G
Sbjct: 74 HARLVVSKQIQ------NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGY 127
Query: 69 AKCGMCEEALKVFSE-MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRN 127
+ G E ++ FS M G P+ T +VL AC + D G +H A GF+ +
Sbjct: 128 GRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWD 184
Query: 128 VYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR 187
VYV +LI +Y + + +F+ M R + SW++MI G+ +
Sbjct: 185 VYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQ-----SGNAKEALTLS 239
Query: 188 VGMKP-NYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEH----YGCLVDLLSR 242
G++ + VT + +L AC+ G ++G + Y I G+E L+DL +
Sbjct: 240 NGLRAMDSVTVVSLLSACTEAGDFNRG-----VTIHSYSIKHGLESELFVSNKLIDLYAE 294
Query: 243 AGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLS 289
GRL + ++V M V + + W +++ K L E+ +R +S
Sbjct: 295 FGRLRDCQKVFDRMYV-RDLISWNSII------KAYELNEQPLRAIS 334
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 106/255 (41%), Gaps = 11/255 (4%)
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
K+G++ E+ V L +L+ K +H + ++NV + L+++Y G +
Sbjct: 46 KNGNESKEIDDVHTLFRYCT--NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVA 103
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX-XXXXMIRVGMKPNYVTFIGVLHAC 204
F+ ++ R V +W+ MI G+ M+ G+ P+Y TF VL AC
Sbjct: 104 LARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC 163
Query: 205 SHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV 264
V +D + + + +G + V L+ L SR + AR + M V +
Sbjct: 164 RTV--IDGNK--IHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPV-RDMGS 218
Query: 265 WGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKS 324
W A++ G N A+EA+ + L ++ V + + EAG + I
Sbjct: 219 WNAMISGYCQSGN---AKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIK 275
Query: 325 RGVKKTPGCSSITID 339
G++ S+ ID
Sbjct: 276 HGLESELFVSNKLID 290
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/427 (43%), Positives = 275/427 (64%), Gaps = 2/427 (0%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKP-NEVTVVAV 99
G V AR +F + ++ S+ S++ A+ GM EA +VF + K+ N +T+ V
Sbjct: 234 GGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTV 293
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
L+A + G L GK +H G +V V ++IDMY KCG +E + F+ M+ + V
Sbjct: 294 LLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNV 353
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
SW++MI G+ MH MI G++PNY+TF+ VL ACSH GL +G
Sbjct: 354 RSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNA 413
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIV 279
M+ +G+ PG+EHYGC+VDLL RAG L++A ++I M + P+ ++W +LL CR+HKN+
Sbjct: 414 MKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVE 473
Query: 280 LAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITID 339
LAE ++ L +LD N GYY+++S++YA+AG+W++V R+R +MK+RG+ K PG S + ++
Sbjct: 474 LAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELN 533
Query: 340 GVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHS 399
G VH F+ GDE HPQ + I+E +L K+ GY+ +TS V D+ D ++KE+ L HS
Sbjct: 534 GEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDV-DEEEKEMTLRVHS 592
Query: 400 EKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGA 459
EKLA+ +G++NT PG ++ ++KNLRVC DCH KL+S+I +RE VVRD RFH FKDG
Sbjct: 593 EKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGG 652
Query: 460 CTCKDYW 466
C+C DYW
Sbjct: 653 CSCGDYW 659
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 111/228 (48%), Gaps = 16/228 (7%)
Query: 53 MPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG 112
+ + +V SW SVI LA+ G EAL FS M K P + + AC+ L D+ G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 113 KSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMH 172
K H+ A G+ +++V +ALI MY CG LE+ +VF+ + +R +VSW+SMI G+ ++
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 173 XXXXXXXXXXXXMI------RVGMKPNYVTFIGVLHACSHV---GLVDKGRALLTIMRRD 223
++ M + + + V+ ACS V GL + + + D
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 224 YGIVPGVEHYGCLVDLLSRAGR--LEEAREVIANMSVPPNRVVWGALL 269
G+ G L+D ++ G + AR++ + V +RV + +++
Sbjct: 216 RGVSVG----NTLLDAYAKGGEGGVAVARKIFDQI-VDKDRVSYNSIM 258
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 127/269 (47%), Gaps = 11/269 (4%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
Q DI + +I G + AR +F +P+RN+ SWTS+I G G +A+ +F +
Sbjct: 108 QSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKD 167
Query: 84 M------EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDM 137
+ + D + + +V+V+ AC+++ +S+H F GF R V V N L+D
Sbjct: 168 LLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDA 227
Query: 138 YVKC--GCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKP-NY 194
Y K G + ++F+ + ++ VS++S++ +A +++ + N
Sbjct: 228 YAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNA 287
Query: 195 VTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIA 254
+T VL A SH G + G+ + + R G+ V ++D+ + GR+E AR+
Sbjct: 288 ITLSTVLLAVSHSGALRIGKCIHDQVIR-MGLEDDVIVGTSIIDMYCKCGRVETARKAFD 346
Query: 255 NMSVPPNRVVWGALLGGCRLHKNIVLAEE 283
M N W A++ G +H + A E
Sbjct: 347 RMK-NKNVRSWTAMIAGYGMHGHAAKALE 374
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ D+ +I G V AR F M +NVRSWT++I G G +AL++F
Sbjct: 319 EDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPA 378
Query: 84 MEKDGSKPNEVTVVAVLVACAQLG-DLE----FGKSVHRFAKGNGFLRNVYVCNALIDMY 138
M G +PN +T V+VL AC+ G +E F RF G Y C ++D+
Sbjct: 379 MIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEH--YGC--MVDLL 434
Query: 139 VKCGCLEEGYRVFEGMRER-TVVSWSSMIVGFAMH 172
+ G L++ Y + + M+ + + WSS++ +H
Sbjct: 435 GRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIH 469
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 377 bits (969), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/468 (41%), Positives = 275/468 (58%), Gaps = 4/468 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +YA CG A+ +FD + ++ +W M++ G A +LF +P +N+ SW
Sbjct: 146 LVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSW 205
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLV-ACAQLGDLEFGKSVHRFAK 120
T++I G + G EA VF+EM ++ + V++ +V ACA L G+ VH
Sbjct: 206 TALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVI 265
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
GF V++ NALIDMY KC + +F MR R VVSW+S+IVG A H
Sbjct: 266 ALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALA 325
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M+ G+KPN VTF+G+++ACSHVG V+KGR L M +DYGI P ++HY CL+DLL
Sbjct: 326 LYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLL 385
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHL-SKLDLLNDGYY 299
R+G L+EA +I M PP+ W ALL C+ + HL S L + Y
Sbjct: 386 GRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTY 445
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIF 359
+++SN+YA A W +VS RR + V+K PG SS+ + F AG+ +HP + IF
Sbjct: 446 ILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIF 505
Query: 360 EMWEKLLVKMKMK-GYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIR 418
+ +KL +M+++ GY+PDTS +L D+ D ++KE L+ HSE+ A+ YGL+ PG IR
Sbjct: 506 RLLKKLEEEMRIRNGYVPDTSWILHDM-DEQEKEKLLFWHSERSAVAYGLLKAVPGTPIR 564
Query: 419 IMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
I+KNLRVC DCH K +SEI REI+VRD R+H FK G C+C D+W
Sbjct: 565 IVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 32/170 (18%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+++Y CG HA +FD+MP RD H+ +W
Sbjct: 44 LVNVYGKCGAASHALQVFDEMPHRD---------HI----------------------AW 72
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
SV+ L + + + L VFS + +P++ A++ ACA LG ++ G+ VH
Sbjct: 73 ASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFI 132
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFA 170
+ + + V ++L+DMY KCG L VF+ +R + +SW++M+ G+A
Sbjct: 133 VSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYA 182
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 97/214 (45%), Gaps = 8/214 (3%)
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
L CA+ L K++H G ++ + N L+++Y KCG +VF+ M R
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 160 VSWSSMIVGF-AMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL-L 217
++W+S++ + G++P+ F ++ AC+++G +D GR +
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 218 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKN 277
+ +Y V+ LVD+ ++ G L A+ V ++ V N + W A++ G +
Sbjct: 130 HFIVSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRV-KNTISWTAMVSG---YAK 183
Query: 278 IVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGK 311
EEA+ L + N + + + + ++GK
Sbjct: 184 SGRKEEALELFRILPVKNLYSWTALISGFVQSGK 217
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/468 (41%), Positives = 283/468 (60%), Gaps = 4/468 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRD--IATWNIMIAHLINVGYVGAARDLFSSMPQRNVR 59
L+ +Y+ CG AR + ++ +D I + ++ I +G + A+++F S+ R+V
Sbjct: 320 LISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVV 379
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
+WT++I G + G EA+ +F M G +PN T+ A+L + L L GK +H A
Sbjct: 380 AWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSA 439
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMHXXXXXX 178
+G + +V V NALI MY K G + R F+ +R ER VSW+SMI+ A H
Sbjct: 440 VKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEA 499
Query: 179 XXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVD 238
M+ G++P+++T++GV AC+H GLV++GR +M+ I+P + HY C+VD
Sbjct: 500 LELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVD 559
Query: 239 LLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY 298
L RAG L+EA+E I M + P+ V WG+LL CR+HKNI L + A L L+ N G
Sbjct: 560 LFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGA 619
Query: 299 YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGI 358
Y ++N+Y+ GKWEE ++IR+ MK VKK G S I + VH F D THP+ I
Sbjct: 620 YSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEI 679
Query: 359 FEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIR 418
+ +K+ ++K GY+PDT+ VL DLE+ + KE L HSEKLA+ +GLI+T ++R
Sbjct: 680 YMTMKKIWDEIKKMGYVPDTASVLHDLEE-EVKEQILRHHSEKLAIAFGLISTPDKTTLR 738
Query: 419 IMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
IMKNLRVC DCH A K +S++ REI+VRD RFH FKDG C+C+DYW
Sbjct: 739 IMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 148/318 (46%), Gaps = 38/318 (11%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL++YA CG+ A+ +FD+M RDI++WN MIA + VG + A F M +R++ +W
Sbjct: 187 LLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTW 246
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDG-SKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
S+I G + G AL +FS+M +D P+ T+ +VL ACA L L GK +H
Sbjct: 247 NSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIV 306
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLE-----------------------EGY--------- 148
GF + V NALI MY +CG +E +GY
Sbjct: 307 TTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQA 366
Query: 149 -RVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHV 207
+F +++R VV+W++MIVG+ H M+ G +PN T +L S +
Sbjct: 367 KNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSL 426
Query: 208 GLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGA 267
+ G+ + + G + V L+ + ++AG + A + + V W +
Sbjct: 427 ASLSHGKQIHGSAVKS-GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTS 485
Query: 268 LLGGCRLHKNIVLAEEAM 285
++ H + AEEA+
Sbjct: 486 MIIALAQHGH---AEEAL 500
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 140/303 (46%), Gaps = 34/303 (11%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+++Y+ G HAR +FD+MP R +WN +++ G + + + F +PQR+ SW
Sbjct: 55 LMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSW 114
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
T++I G G +A++V +M K+G +P + T+ VL + A +E GK VH F
Sbjct: 115 TTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVK 174
Query: 122 NGFLRNVYVCNALIDMYVKC-------------------------------GCLEEGYRV 150
G NV V N+L++MY KC G ++
Sbjct: 175 LGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQ 234
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG-MKPNYVTFIGVLHACSHVGL 209
FE M ER +V+W+SMI GF M+R + P+ T VL AC+++
Sbjct: 235 FEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEK 294
Query: 210 VDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV-WGAL 268
+ G+ + + + + G+ L+ + SR G +E AR +I ++ + AL
Sbjct: 295 LCIGKQIHSHIVTTGFDISGIV-LNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTAL 353
Query: 269 LGG 271
L G
Sbjct: 354 LDG 356
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/461 (41%), Positives = 287/461 (62%), Gaps = 4/461 (0%)
Query: 8 SCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYG 67
SCG HA ++ I +++ ++ G + +A LF SM +++ +W + +
Sbjct: 126 SCGFALHAHVVKYGFGCLGIVATELVMMYM-KFGELSSAEFLFESMQVKDLVAWNAFLAV 184
Query: 68 LAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRN 127
+ G AL+ F++M D + + TVV++L AC QLG LE G+ ++ A+ N
Sbjct: 185 CVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCN 244
Query: 128 VYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR 187
+ V NA +DM++KCG E +FE M++R VVSWS+MIVG+AM+ M
Sbjct: 245 IIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQN 304
Query: 188 VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM--RRDYGIVPGVEHYGCLVDLLSRAGR 245
G++PNYVTF+GVL ACSH GLV++G+ ++M D + P EHY C+VDLL R+G
Sbjct: 305 EGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGL 364
Query: 246 LEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNV 305
LEEA E I M V P+ +WGALLG C +H++++L ++ L + Y+V++SN+
Sbjct: 365 LEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNI 424
Query: 306 YAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKL 365
YA AGKW+ V ++R M+ G KK SS+ +G +H F GD++HPQ+K I+E +++
Sbjct: 425 YAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEI 484
Query: 366 LVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRV 425
L K++ GY+PDT V D+E ++KE L HSEKLA+ +GLI +PG IR+MKNLR
Sbjct: 485 LKKIRKMGYVPDTCSVFHDVE-MEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRT 543
Query: 426 CEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
C+DCHA K VS + + EI++RD+NRFH F++G C+CK++W
Sbjct: 544 CDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 8/242 (3%)
Query: 33 MIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPN 92
++ +L+ +G + AR +F M + + W ++ G + + E+L ++ +M G +P+
Sbjct: 49 LLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPD 108
Query: 93 EVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE 152
E T V+ A +QLGD G ++H GF V L+ MY+K G L +FE
Sbjct: 109 EFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFE 168
Query: 153 GMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDK 212
M+ + +V+W++ + M ++ + T + +L AC +G ++
Sbjct: 169 SMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEI 228
Query: 213 GRALLTIMRR---DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALL 269
G + R+ D I+ VE+ +D+ + G E AR + M N V W ++
Sbjct: 229 GEEIYDRARKEEIDCNII--VEN--ARLDMHLKCGNTEAARVLFEEMK-QRNVVSWSTMI 283
Query: 270 GG 271
G
Sbjct: 284 VG 285
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/466 (41%), Positives = 285/466 (61%), Gaps = 22/466 (4%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y+ G+ A +F KM RD+ TWN MI GYV FS +
Sbjct: 446 LMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMI-----TGYV------FSEHHE------ 488
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+ L K E KV + KPN +T++ +L +CA L L GK +H +A
Sbjct: 489 -DALLLLHKMQNLER--KVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK 545
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
N +V V +AL+DMY KCGCL+ +VF+ + ++ V++W+ +I+ + MH
Sbjct: 546 NNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDL 605
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M+ G+KPN VTFI V ACSH G+VD+G + +M+ DYG+ P +HY C+VDLL
Sbjct: 606 LRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLG 665
Query: 242 RAGRLEEAREVIANMSVPPNRV-VWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYV 300
RAGR++EA +++ M N+ W +LLG R+H N+ + E A ++L +L+ +YV
Sbjct: 666 RAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYV 725
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFE 360
+++N+Y+ AG W++ + +RR MK +GV+K PGCS I VH+FVAGD +HPQ++ +
Sbjct: 726 LLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSG 785
Query: 361 MWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIM 420
E L +M+ +GY+PDTS VL ++E+ +KEI L HSEKLA+ +G++NT PG IR+
Sbjct: 786 YLETLWERMRKEGYVPDTSCVLHNVEE-DEKEILLCGHSEKLAIAFGILNTSPGTIIRVA 844
Query: 421 KNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
KNLRVC DCH A K +S+I +REI++RD RFH FK+G C+C DYW
Sbjct: 845 KNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 134/266 (50%), Gaps = 9/266 (3%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N ++A +G + +++ L S R++ +W +V+ L + EAL+ EM +G +
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL-RNVYVCNALIDMYVKCGCLEEGYR 149
P+E T+ +VL AC+ L L GK +H +A NG L N +V +AL+DMY C + G R
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 150 VFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR-VGMKPNYVTFIGVLHACSHVG 208
VF+GM +R + W++MI G++ + M G+ N T GV+ AC G
Sbjct: 360 VFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419
Query: 209 LVDKGRALLT-IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGA 267
+ A+ +++R V++ L+D+ SR G+++ A + M + V W
Sbjct: 420 AFSRKEAIHGFVVKRGLDRDRFVQN--TLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNT 476
Query: 268 LLGG---CRLHKNIVLAEEAMRHLSK 290
++ G H++ +L M++L +
Sbjct: 477 MITGYVFSEHHEDALLLLHKMQNLER 502
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 119/251 (47%), Gaps = 14/251 (5%)
Query: 39 NVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKD-GSKPNEVTVV 97
N V + R +F M R + W ++I G ++ +EAL +F ME+ G N T+
Sbjct: 350 NCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMA 409
Query: 98 AVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER 157
V+ AC + G +++H F G R+ +V N L+DMY + G ++ R+F M +R
Sbjct: 410 GVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR 469
Query: 158 TVVSWSSMIVGFA-----------MHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSH 206
+V+W++MI G+ +H RV +KPN +T + +L +C+
Sbjct: 470 DLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAA 529
Query: 207 VGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWG 266
+ + KG+ + ++ + V LVD+ ++ G L+ +R+V + N + W
Sbjct: 530 LSALAKGKEIHAYAIKN-NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWN 587
Query: 267 ALLGGCRLHKN 277
++ +H N
Sbjct: 588 VIIMAYGMHGN 598
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 105/236 (44%), Gaps = 9/236 (3%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G GA +F + +RN SW S+I L E AL+ F M + +P+ T+V+V+
Sbjct: 147 GDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVV 206
Query: 101 VACAQLG---DLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER 157
AC+ L L GK VH + G L N ++ N L+ MY K G L + R
Sbjct: 207 TACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGR 265
Query: 158 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL 217
+V+W++++ + M+ G++P+ T VL ACSH+ ++ G+ L
Sbjct: 266 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 325
Query: 218 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV--WGALLGG 271
++ + LVD+ ++ R V M +R + W A++ G
Sbjct: 326 AYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMF---DRKIGLWNAMIAG 378
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 115/250 (46%), Gaps = 8/250 (3%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
V A +F S R+ W ++ + + EA+ + +M G KP+ A+L A
Sbjct: 48 VSGAPSIFISQ-SRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKA 106
Query: 103 CAQLGDLEFGKSVHRFAKGNGF-LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVS 161
A L D+E GK +H G+ + +V V N L+++Y KCG Y+VF+ + ER VS
Sbjct: 107 VADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVS 166
Query: 162 WSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMR 221
W+S+I M+ ++P+ T + V+ ACS++ + + ++
Sbjct: 167 WNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG--LMMGKQV 224
Query: 222 RDYGIVPGVEH---YGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNI 278
YG+ G + LV + + G+L ++ ++ + + V W +L ++ +
Sbjct: 225 HAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFG-GRDLVTWNTVLSSLCQNEQL 283
Query: 279 VLAEEAMRHL 288
+ A E +R +
Sbjct: 284 LEALEYLREM 293
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/442 (42%), Positives = 273/442 (61%), Gaps = 9/442 (2%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
++A N I + G V A R LF MP + + +W +VI G ++ G+ + L+++ +M+
Sbjct: 190 EVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMK 249
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
G P+ T+V+VL +CA LG + G V + + NGF+ NV+V NA I MY +CG L
Sbjct: 250 SSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLA 309
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
+ VF+ M +++VSW++MI + MH MI+ G++P+ F+ VL ACS
Sbjct: 310 KARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACS 369
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
H GL DKG L M+R+Y + PG EHY CLVDLL RAGRL+EA E I +M V P+ VW
Sbjct: 370 HSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVW 429
Query: 266 GALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSR 325
GALLG C++HKN+ +AE A + + + N GYYV+MSN+Y+++ E + RIR +M+ R
Sbjct: 430 GALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRER 489
Query: 326 GVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVK-MKMKGYIPDTSVVLLD 384
+K PG S + G VH F+AGD +H Q + + M ++L M++ G +D
Sbjct: 490 AFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGN--------MD 541
Query: 385 LEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREI 444
+ ++ HSE+LA+ +G++N+ PG I ++KNLRVCEDCH K VS+I +R+
Sbjct: 542 CDRGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQF 601
Query: 445 VVRDRNRFHCFKDGACTCKDYW 466
VVRD +RFH FKDG C+CKDYW
Sbjct: 602 VVRDASRFHYFKDGVCSCKDYW 623
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 142/303 (46%), Gaps = 6/303 (1%)
Query: 33 MIAHLINVGYVGAARDLFSSMPQRNVRS--WTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
+I+ G V AR +F PQ + S + ++I G +A +F M++ G
Sbjct: 94 LISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVS 153
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
+ VT++ ++ C L G+S+H G V V N+ I MY+KCG +E G R+
Sbjct: 154 VDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRL 213
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
F+ M + +++W+++I G++ + M G+ P+ T + VL +C+H+G
Sbjct: 214 FDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAK 273
Query: 211 DKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
G + ++ + G VP V + + +R G L +AR V M V + V W A++G
Sbjct: 274 KIGHEVGKLVESN-GFVPNVFVSNASISMYARCGNLAKARAVFDIMPV-KSLVSWTAMIG 331
Query: 271 GCRLHKNIVLAEEAMRHLSKLDLLNDG-YYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKK 329
+H + + K + DG +V++ + + +G ++ + R MK R K
Sbjct: 332 CYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMK-REYKL 390
Query: 330 TPG 332
PG
Sbjct: 391 EPG 393
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 4/213 (1%)
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
W + LA + E++ ++ M + GS P+ + +L +CA L G+ +H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVS--WSSMIVGFAMHXXXXXX 178
G +V ALI MY KCG + + +VFE + + +S ++++I G+ +
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 179 XXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVD 238
M G+ + VT +G++ C+ + GR+L + G+ V +
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKG-GLDSEVAVLNSFIT 199
Query: 239 LLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ + G +E R + M V + W A++ G
Sbjct: 200 MYMKCGSVEAGRRLFDEMPV-KGLITWNAVISG 231
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/484 (41%), Positives = 285/484 (58%), Gaps = 56/484 (11%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+HLY SCG AR +FD+MP+R + +WN MI L+ G
Sbjct: 192 LIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEY------------------ 233
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+ AL++F EM++ +P+ T+ +VL ACA LG L G H F
Sbjct: 234 -------------DSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAF--- 276
Query: 122 NGFLR--------NVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHX 173
LR +V V N+LI+MY KCG L +VF+GM++R + SW++MI+GFA H
Sbjct: 277 --LLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHG 334
Query: 174 XXXXXXXXXXXMI--RVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVE 231
M+ R ++PN VTF+G+L AC+H G V+KGR +M RDY I P +E
Sbjct: 335 RAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALE 394
Query: 232 HYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG-CRLHKNIVLAEEAMRHLSK 290
HYGC+VDL++RAG + EA +++ +M + P+ V+W +LL C+ ++ L+EE R++
Sbjct: 395 HYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIG 454
Query: 291 LDLLND-------GYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVH 343
N+ G YV++S VYA A +W +V +R+LM G++K PGCSSI I+G+ H
Sbjct: 455 TKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISH 514
Query: 344 EFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTS-VVLLDLEDAKQKEIFLYRHSEKL 402
EF AGD +HPQ K I++ + + +++ GY+PD S L+D + KE L HSE+L
Sbjct: 515 EFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERL 574
Query: 403 ALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTC 462
A+ +GLIN P IRI KNLRVC DCH KL+S++ N EI+VRDR RFH FKDG+C+C
Sbjct: 575 AIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSC 634
Query: 463 KDYW 466
DYW
Sbjct: 635 LDYW 638
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 117/253 (46%), Gaps = 9/253 (3%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLA-KCGMCEEALKVFSEM-EKDGSKPNEVTVVAVL 100
V A +F S+ + W ++I A EEA ++ +M E+ S P++ T VL
Sbjct: 99 VNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVL 158
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
ACA + GK VH +GF +VYV N LI +Y CGCL+ +VF+ M ER++V
Sbjct: 159 KACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLV 218
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGR-ALLTI 219
SW+SMI M R +P+ T VL AC+ +G + G A +
Sbjct: 219 SWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFL 277
Query: 220 MRR-DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNI 278
+R+ D + V L+++ + G L A +V M + W A++ G H
Sbjct: 278 LRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQ-KRDLASWNAMILGFATHGR- 335
Query: 279 VLAEEAMRHLSKL 291
AEEAM ++
Sbjct: 336 --AEEAMNFFDRM 346
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/442 (41%), Positives = 275/442 (62%), Gaps = 2/442 (0%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM- 84
DI N ++ G + A +FS M +++ SW ++I G +K EAL +F+ +
Sbjct: 431 DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLL 490
Query: 85 EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCL 144
E+ P+E TV VL ACA L + G+ +H + NG+ + +V N+L+DMY KCG L
Sbjct: 491 EEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 550
Query: 145 EEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHAC 204
+ +F+ + + +VSW+ MI G+ MH M + G++ + ++F+ +L+AC
Sbjct: 551 LLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYAC 610
Query: 205 SHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV 264
SH GLVD+G IMR + I P VEHY C+VD+L+R G L +A I NM +PP+ +
Sbjct: 611 SHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATI 670
Query: 265 WGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKS 324
WGALL GCR+H ++ LAE+ + +L+ N GYYV+M+N+YAEA KWE+V R+R+ +
Sbjct: 671 WGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQ 730
Query: 325 RGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLD 384
RG++K PGCS I I G V+ FVAGD ++P+ + I K+ +M +GY P T L+D
Sbjct: 731 RGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALID 790
Query: 385 LEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREI 444
E+ +++E L HSEKLA+ G+I++ G IR+ KNLRVC DCH K +S++ REI
Sbjct: 791 AEEMEKEEA-LCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREI 849
Query: 445 VVRDRNRFHCFKDGACTCKDYW 466
V+RD NRFH FKDG C+C+ +W
Sbjct: 850 VLRDSNRFHQFKDGHCSCRGFW 871
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 5/263 (1%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
GE H ++ +R+ + N ++A + V +AR +F M +R+V SW S+I G
Sbjct: 214 GEQLHGFILKSGFGERN-SVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
G+ E+ L VF +M G + + T+V+V CA + G++VH F R
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
CN L+DMY KCG L+ VF M +R+VVS++SMI G+A M G
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLT-IMRRDYGIVPGVEHYGCLVDLLSRAGRLEE 248
+ P+ T VL+ C+ L+D+G+ + I D G V + L+D+ ++ G ++E
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQE 450
Query: 249 AREVIANMSVPPNRVVWGALLGG 271
A V + M V + + W ++GG
Sbjct: 451 AELVFSEMRV-KDIISWNTIIGG 472
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 131/246 (53%), Gaps = 3/246 (1%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N ++ G + +A+ +F M R+V S+TS+I G A+ G+ EA+K+F EME++G
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
P+ TV AVL CA+ L+ GK VH + K N +++V NAL+DMY KCG ++E V
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG-MKPNYVTFIGVLHACSHVGL 209
F MR + ++SW+++I G++ + ++ P+ T VL AC+ +
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 514
Query: 210 VDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALL 269
DKGR + + R+ G LVD+ ++ G L A + +++ + V W ++
Sbjct: 515 FDKGREIHGYIMRN-GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA-SKDLVSWTVMI 572
Query: 270 GGCRLH 275
G +H
Sbjct: 573 AGYGMH 578
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 108/259 (41%), Gaps = 44/259 (16%)
Query: 5 LYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSV 64
+Y +CG+ + A +FD++ WNI++ L
Sbjct: 138 MYTNCGDLKEASRVFDEVKIEKALFWNILMNEL--------------------------- 170
Query: 65 IYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGF 124
AK G ++ +F +M G + + T V + + L + G+ +H F +GF
Sbjct: 171 ----AKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGF 226
Query: 125 LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXX 184
V N+L+ Y+K ++ +VF+ M ER V+SW+S+I G+ +
Sbjct: 227 GERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQ 286
Query: 185 MIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI------MRRDYGIVPGVEHYGCLVD 238
M+ G++ + T + V C+ L+ GRA+ +I R D L+D
Sbjct: 287 MLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED-------RFCNTLLD 339
Query: 239 LLSRAGRLEEAREVIANMS 257
+ S+ G L+ A+ V MS
Sbjct: 340 MYSKCGDLDSAKAVFREMS 358
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 6/218 (2%)
Query: 55 QRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKS 114
R+V + + + G E A+K+ K P T+ +VL CA L+ GK
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKE 115
Query: 115 VHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXX 174
V F +GNGF+ + + + L MY CG L+E RVF+ ++ + W+ ++ A
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGD 175
Query: 175 XXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT-IMRRDYGIVPGVEHY 233
M+ G++ + TF V + S + V G L I++ +G V +
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGN- 234
Query: 234 GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
LV + R++ AR+V M+ + + W +++ G
Sbjct: 235 -SLVAFYLKNQRVDSARKVFDEMT-ERDVISWNSIING 270
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 37/175 (21%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +YA CG A ++FD + +D+ +W +MIA
Sbjct: 540 LVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG------------------------- 574
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
YG+ G +EA+ +F++M + G + +E++ V++L AC+ G ++ G +
Sbjct: 575 ----YGMH--GFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 628
Query: 122 NGFLRNV---YVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMH 172
+ Y C ++DM + G L + YR E M W +++ G +H
Sbjct: 629 ECKIEPTVEHYAC--IVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIH 681
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/465 (40%), Positives = 278/465 (59%), Gaps = 32/465 (6%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L++LYA CG+ AR +FD M ++DI TW+ MI GY +S P+
Sbjct: 253 LVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQ-----GYAS------NSFPK------ 295
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
E +++F +M ++ KP++ ++V L +CA LG L+ G+
Sbjct: 296 --------------EGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDR 341
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+ FL N+++ NALIDMY KCG + G+ VF+ M+E+ +V ++ I G A +
Sbjct: 342 HEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAV 401
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
++G+ P+ TF+G+L C H GL+ G + Y + VEHYGC+VDL
Sbjct: 402 FGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWG 461
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RAG L++A +I +M + PN +VWGALL GCRL K+ LAE ++ L L+ N G YV
Sbjct: 462 RAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQ 521
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
+SN+Y+ G+W+E + +R +M +G+KK PG S I ++G VHEF+A D++HP + I+
Sbjct: 522 LSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAK 581
Query: 362 WEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMK 421
E L +M++ G++P T V D+E+ +++ + Y HSEKLA+ GLI+T G IR++K
Sbjct: 582 LEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGY-HSEKLAVALGLISTDHGQVIRVVK 640
Query: 422 NLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
NLRVC DCH KL+S+I REIVVRD NRFHCF +G+C+C DYW
Sbjct: 641 NLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 139/274 (50%), Gaps = 2/274 (0%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
D+A +++ G + A LF +P R+V +WT++ G G EA+ +F +
Sbjct: 143 NHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKK 202
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M + G KP+ +V VL AC +GDL+ G+ + ++ + +N +V L+++Y KCG
Sbjct: 203 MVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGK 262
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
+E+ VF+ M E+ +V+WS+MI G+A + M++ +KP+ + +G L +
Sbjct: 263 MEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSS 322
Query: 204 CSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRV 263
C+ +G +D G ++++ R + + + L+D+ ++ G + EV M + V
Sbjct: 323 CASLGALDLGEWGISLIDR-HEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK-EKDIV 380
Query: 264 VWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG 297
+ A + G + ++ L+ KL + DG
Sbjct: 381 IMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDG 414
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 106/223 (47%), Gaps = 2/223 (0%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGD 108
LFS N+ + S+I G + E L +F + K G + T VL AC +
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 109 LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVG 168
+ G +H GF +V +L+ +Y G L + +++F+ + +R+VV+W+++ G
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 169 FAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVP 228
+ M+ +G+KP+ + VL AC HVG +D G ++ M + +
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM-EEMEMQK 245
Query: 229 GVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
LV+L ++ G++E+AR V +M V + V W ++ G
Sbjct: 246 NSFVRTTLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMIQG 287
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/462 (40%), Positives = 274/462 (59%), Gaps = 2/462 (0%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMP-QRNVRSWTSV 64
Y CG+ A F P R + W MI + V A +F M +N+ +W ++
Sbjct: 196 YIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAM 255
Query: 65 IYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGF 124
I G + E+ LK+F M ++G +PN + + L+ C++L L+ G+ +H+ +
Sbjct: 256 ISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTL 315
Query: 125 LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXX 184
+V +LI MY KCG L + +++FE M+++ VV+W++MI G+A H
Sbjct: 316 CNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFRE 375
Query: 185 MIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAG 244
MI ++P+++TF+ VL AC+H GLV+ G A M RDY + P +HY C+VDLL RAG
Sbjct: 376 MIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAG 435
Query: 245 RLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSN 304
+LEEA ++I +M P+ V+G LLG CR+HKN+ LAE A L +L+ N YV ++N
Sbjct: 436 KLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLAN 495
Query: 305 VYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEK 364
+YA +WE+V+R+R+ MK V K PG S I I VH F + D HP+ I + ++
Sbjct: 496 IYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKE 555
Query: 365 LLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLR 424
L KMK+ GY P+ L ++E+ +QKE L HSEKLA+ +G I G I++ KNLR
Sbjct: 556 LEKKMKLAGYKPELEFALHNVEE-EQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLR 614
Query: 425 VCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
+C DCH A K +SEIE REI+VRD RFH FKDG+C+C DYW
Sbjct: 615 ICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 126/265 (47%), Gaps = 13/265 (4%)
Query: 15 ARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMC 74
A +FD++P+ D ++NIM++ + A+ F MP ++ SW ++I G A+ G
Sbjct: 112 AHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEM 171
Query: 75 EEALKVF-SEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNA 133
E+A ++F S MEK NEV+ A++ + GDLE K+ H F +R V A
Sbjct: 172 EKARELFYSMMEK-----NEVSWNAMISGYIECGDLE--KASHFFKVAP--VRGVVAWTA 222
Query: 134 LIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKP 192
+I Y+K +E +F+ M + +V+W++MI G+ + M+ G++P
Sbjct: 223 MITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRP 282
Query: 193 NYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV 252
N L CS + + GR + I+ + + V L+ + + G L +A ++
Sbjct: 283 NSSGLSSALLGCSELSALQLGRQIHQIVSKS-TLCNDVTALTSLISMYCKCGELGDAWKL 341
Query: 253 IANMSVPPNRVVWGALLGGCRLHKN 277
M + V W A++ G H N
Sbjct: 342 FEVMK-KKDVVAWNAMISGYAQHGN 365
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/450 (42%), Positives = 279/450 (62%), Gaps = 20/450 (4%)
Query: 31 NIMIAHLINV----GYVGAARDLFSSMP--QRNVRSWTSVIYGLAKCGMCEEALKVFSEM 84
N++I LI++ V AR +F S+ +R+V +WT +I G ++ G +AL++ SEM
Sbjct: 407 NMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM 466
Query: 85 -EKD-GSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRN------VYVCNALID 136
E+D ++PN T+ LVACA L L GK +H +A LRN ++V N LID
Sbjct: 467 FEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYA-----LRNQQNAVPLFVSNCLID 521
Query: 137 MYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVT 196
MY KCG + + VF+ M + V+W+S++ G+ MH M R+G K + VT
Sbjct: 522 MYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVT 581
Query: 197 FIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM 256
+ VL+ACSH G++D+G M+ +G+ PG EHY CLVDLL RAGRL A +I M
Sbjct: 582 LLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEM 641
Query: 257 SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVS 316
+ P VVW A L CR+H + L E A +++L +DG Y ++SN+YA AG+W++V+
Sbjct: 642 PMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVT 701
Query: 317 RIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIP 376
RIR LM+ +GVKK PGCS + F GD+THP AK I+++ + ++K GY+P
Sbjct: 702 RIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVP 761
Query: 377 DTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLV 436
+T L D++D ++K+ L+ HSEKLAL YG++ T G +IRI KNLRVC DCH AF +
Sbjct: 762 ETGFALHDVDD-EEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYM 820
Query: 437 SEIENREIVVRDRNRFHCFKDGACTCKDYW 466
S I + +I++RD +RFH FK+G+C+CK YW
Sbjct: 821 SRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 146/299 (48%), Gaps = 19/299 (6%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVR-- 59
L+ +YA CG A +F M +D+ +WN M+A +G A LF M + ++
Sbjct: 270 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329
Query: 60 --SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
+W++ I G A+ G+ EAL V +M G KPNEVT+++VL CA +G L GK +H
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389
Query: 118 FA-------KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM--RERTVVSWSSMIVG 168
+A + NG V N LIDMY KC ++ +F+ + +ER VV+W+ MI G
Sbjct: 390 YAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGG 449
Query: 169 FAMHXXXXXXXXXXXXMIR--VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGI 226
++ H M +PN T L AC+ + + G+ + R+
Sbjct: 450 YSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQN 509
Query: 227 VPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
+ CL+D+ ++ G + +AR V NM + N V W +L+ G +H EEA+
Sbjct: 510 AVPLFVSNCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHG---YGEEAL 564
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 175/417 (41%), Gaps = 40/417 (9%)
Query: 9 CGETRHARLMFDKMPQRDIATWNI---MIAHLINVGYVGAARDLFSSMPQRN--VRSWTS 63
C +L+ K+ I T N+ +I+ I+VG + A L P + V W S
Sbjct: 38 CKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 64 VIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNG 123
+I G + L +F M P+ T V AC ++ + G+S H + G
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG 157
Query: 124 FLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXX 183
F+ NV+V NAL+ MY +C L + +VF+ M VVSW+S+I +A
Sbjct: 158 FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFS 217
Query: 184 XMI-RVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSR 242
M G +P+ +T + VL C+ +G G+ L ++ + CLVD+ ++
Sbjct: 218 RMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTS-EMIQNMFVGNCLVDMYAK 276
Query: 243 AGRLEEAREVIANMSVPPNRVVWGALLGGC----RLHKNIVLAEEAMRHLSKLDLLNDGY 298
G ++EA V +NMSV + V W A++ G R + L E+ K+D++
Sbjct: 277 CGMMDEANTVFSNMSV-KDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVT--- 332
Query: 299 YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKT--------PGCSSITIDGVVHEFVAGDE 350
+ + YA+ G E + R M S G+K GC+S V + G E
Sbjct: 333 WSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCAS------VGALMHGKE 386
Query: 351 THPQA-----------KGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLY 396
H A G M L+ M K DT+ + D K++++ +
Sbjct: 387 IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTW 443
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G+ HA + ++ + N +I G + AR +F +M +N +WTS++ G
Sbjct: 496 GKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYG 555
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG-------KSVHRFAKGN 122
G EEAL +F EM + G K + VT++ VL AC+ G ++ G K+V + G
Sbjct: 556 MHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPG- 614
Query: 123 GFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMI 166
Y C L+D+ + G L R+ E M E V W + +
Sbjct: 615 ---PEHYAC--LVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFL 654
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/418 (41%), Positives = 260/418 (62%), Gaps = 1/418 (0%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGD 108
+FS + R+ SW S++ G + G EAL++F +M KP V +V+ ACA L
Sbjct: 299 VFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLAT 358
Query: 109 LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVG 168
L GK +H + GF N+++ +AL+DMY KCG ++ ++F+ M VSW+++I+G
Sbjct: 359 LHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMG 418
Query: 169 FAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVP 228
A+H M R G+KPN V F+ VL ACSHVGLVD+ M + YG+
Sbjct: 419 HALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQ 478
Query: 229 GVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHL 288
+EHY + DLL RAG+LEEA I+ M V P VW LL C +HKN+ LAE+ +
Sbjct: 479 ELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKI 538
Query: 289 SKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAG 348
+D N G YV+M N+YA G+W+E++++R M+ +G++K P CS I + H FV+G
Sbjct: 539 FTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSG 598
Query: 349 DETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGL 408
D +HP I E + ++ +M+ +GY+ DTS VL D+++ ++E+ L+ HSE+LA+ +G+
Sbjct: 599 DRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKREL-LFGHSERLAVAFGI 657
Query: 409 INTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
INT+PG +IR+ KN+R+C DCH A K +S+I REI+VRD +RFH F G C+C DYW
Sbjct: 658 INTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 162/332 (48%), Gaps = 25/332 (7%)
Query: 18 MFDKMPQR--DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCE 75
+FD+MPQR + ++ I + + R +F MP+++V S+ ++I G A+ GM E
Sbjct: 165 VFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYE 224
Query: 76 EALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALI 135
+AL++ EM KP+ T+ +VL ++ D+ GK +H + G +VY+ ++L+
Sbjct: 225 DALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLV 284
Query: 136 DMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYV 195
DMY K +E+ RVF + R +SW+S++ G+ + M+ +KP V
Sbjct: 285 DMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAV 344
Query: 196 TFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 255
F V+ AC+H+ + G+ L + R G + LVD+ S+ G ++ AR++
Sbjct: 345 AFSSVIPACAHLATLHLGKQLHGYVLRG-GFGSNIFIASALVDMYSKCGNIKAARKIFDR 403
Query: 256 MSVPPNRVVWGALLGGCRL----HKNIVLAEEAMRH---------------LSKLDLLND 296
M+V + V W A++ G L H+ + L EE R S + L+++
Sbjct: 404 MNV-LDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDE 462
Query: 297 --GYYVVMSNVYAEAGKWEEVSRIRRLMKSRG 326
GY+ M+ VY + E + + L+ G
Sbjct: 463 AWGYFNSMTKVYGLNQELEHYAAVADLLGRAG 494
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 123/300 (41%), Gaps = 38/300 (12%)
Query: 8 SCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYG 67
S + + F + + +I+I+ N+ + A LF ++ V +W SVI
Sbjct: 20 SKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRC 79
Query: 68 LAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRN 127
+ +AL F EM G P+ +VL +C + DL FG+SVH F G +
Sbjct: 80 FTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCD 139
Query: 128 VYVCNALIDMYVKC-------------------------------GC-----LEEGYRVF 151
+Y NAL++MY K C ++ RVF
Sbjct: 140 LYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVF 199
Query: 152 EGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVD 211
E M + VVS++++I G+A M +KP+ T VL S V
Sbjct: 200 EVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVI 259
Query: 212 KGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
KG+ + + R GI V LVD+ +++ R+E++ V + + + + W +L+ G
Sbjct: 260 KGKEIHGYVIRK-GIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYC-RDGISWNSLVAG 317
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 367 bits (943), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/468 (40%), Positives = 273/468 (58%), Gaps = 6/468 (1%)
Query: 3 LHLYASCGETRHARLMFDKMPQ----RDIATWNIMIAHLINVGYVGAARDLFSSMPQRNV 58
LH A G+ R + + R+++ N +I+ V A +F + R +
Sbjct: 344 LHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL 403
Query: 59 RSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRF 118
SW ++I G A+ G +AL FS+M KP+ T V+V+ A A+L K +H
Sbjct: 404 VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGV 463
Query: 119 AKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXX 178
+ +NV+V AL+DMY KCG + +F+ M ER V +W++MI G+ H
Sbjct: 464 VMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAA 523
Query: 179 XXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVD 238
M + +KPN VTF+ V+ ACSH GLV+ G +M+ +Y I ++HYG +VD
Sbjct: 524 LELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVD 583
Query: 239 LLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY 298
LL RAGRL EA + I M V P V+GA+LG C++HKN+ AE+A L +L+ + GY
Sbjct: 584 LLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGY 643
Query: 299 YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGI 358
+V+++N+Y A WE+V ++R M +G++KTPGCS + I VH F +G HP +K I
Sbjct: 644 HVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKI 703
Query: 359 FEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIR 418
+ EKL+ +K GY+PDT++VL D K++ L HSEKLA+ +GL+NT G +I
Sbjct: 704 YAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQ--LLSTHSEKLAISFGLLNTTAGTTIH 761
Query: 419 IMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
+ KNLRVC DCH A K +S + REIVVRD RFH FK+GAC+C DYW
Sbjct: 762 VRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 125/229 (54%), Gaps = 2/229 (0%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
V AR +F MP+R++ SW +++ G ++ GM AL++ M ++ KP+ +T+V+VL A
Sbjct: 186 VNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPA 245
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
+ L + GK +H +A +GF V + AL+DMY KCG LE ++F+GM ER VVSW
Sbjct: 246 VSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSW 305
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR 222
+SMI + + M+ G+KP V+ +G LHAC+ +G +++GR + +
Sbjct: 306 NSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR-FIHKLSV 364
Query: 223 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ G+ V L+ + + ++ A + + V W A++ G
Sbjct: 365 ELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ-SRTLVSWNAMILG 412
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 125/235 (53%), Gaps = 2/235 (0%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + AR LF M +RNV SW S+I + +EA+ +F +M +G KP +V+V+ L
Sbjct: 285 GSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGAL 344
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
ACA LGDLE G+ +H+ + G RNV V N+LI MY KC ++ +F ++ RT+V
Sbjct: 345 HACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLV 404
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
SW++MI+GFA + M +KP+ T++ V+ A + + + + + ++
Sbjct: 405 SWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVV 464
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
R + V LVD+ ++ G + AR +I +M + W A++ G H
Sbjct: 465 MRS-CLDKNVFVTTALVDMYAKCGAIMIAR-LIFDMMSERHVTTWNAMIDGYGTH 517
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 122/257 (47%), Gaps = 7/257 (2%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G V A +F + + + +++ G AK ++AL+ F M D +P +L
Sbjct: 83 GSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLL 142
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
C +L GK +H +GF +++ L +MY KC + E +VF+ M ER +V
Sbjct: 143 KVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLV 202
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
SW++++ G++ + M +KP+++T + VL A S + L+ G+ +
Sbjct: 203 SWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYA 262
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
R G V LVD+ ++ G LE AR++ M + N V W +++ ++N
Sbjct: 263 MRS-GFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMIDAYVQNEN--- 317
Query: 281 AEEAMRHLSKLDLLNDG 297
+EAM K +L++G
Sbjct: 318 PKEAMLIFQK--MLDEG 332
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVR-- 59
L+ +YA CG ARL+FD M +R + TWN MI G+ AA +LF M + ++
Sbjct: 479 LVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPN 538
Query: 60 --SWTSVIYGLAKCGMCEEALKVFSEMEKDGS 89
++ SVI + G+ E LK F M+++ S
Sbjct: 539 GVTFLSVISACSHSGLVEAGLKCFYMMKENYS 570
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 367 bits (942), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/467 (39%), Positives = 279/467 (59%), Gaps = 3/467 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
+L Y G A +F+ MP + + N MI+ L G + AR +F SM +RN SW
Sbjct: 240 MLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASW 299
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+VI + G EAL +F M+K G +P T++++L CA L L GK VH
Sbjct: 300 QTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVR 359
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
F +VYV + L+ MY+KCG L + +F+ + ++ W+S+I G+A H
Sbjct: 360 CQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKV 419
Query: 182 XXXMIRVG-MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M G KPN VTF+ L ACS+ G+V++G + M +G+ P HY C+VD+L
Sbjct: 420 FCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDML 479
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYV 300
RAGR EA E+I +M+V P+ VWG+LLG CR H + +AE + L +++ N G Y+
Sbjct: 480 GRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYI 539
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGD-ETHPQAKGIF 359
++SN+YA G+W +V+ +R+LMK+R V+K+PGCS ++ VH F G +HP+ + I
Sbjct: 540 LLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESIL 599
Query: 360 EMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRI 419
++ ++L ++ GY PD S L D+ D ++K L HSE+LA+ Y L+ G+ IR+
Sbjct: 600 KILDELDGLLREAGYNPDCSYALHDV-DEEEKVNSLKYHSERLAVAYALLKLSEGIPIRV 658
Query: 420 MKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
MKNLRVC DCH A K++S+++ REI++RD NRFH F++G C+CKDYW
Sbjct: 659 MKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 162/387 (41%), Gaps = 74/387 (19%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ Y GE AR +FD MP+R++ +W ++ ++ G V A LF MP++N SW
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSW 144
Query: 62 -------------------------------TSVIYGLAKCGMCEEALKVFSEMEK---- 86
TS+I+GL K G +EA ++F EM +
Sbjct: 145 TVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVI 204
Query: 87 ----------------DGSK-------PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNG 123
D K EV+ ++L+ Q G +E + +
Sbjct: 205 TWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMP--- 261
Query: 124 FLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXX 183
++ V CNA+I + G + + RVF+ M+ER SW ++I +
Sbjct: 262 -VKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFI 320
Query: 184 XMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL-LTIMRRDYGIVPGVEHYGCLVDLLSR 242
M + G++P + T I +L C+ + + G+ + ++R + + V L+ + +
Sbjct: 321 LMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDV--DVYVASVLMTMYIK 378
Query: 243 AGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDL-----LNDG 297
G L +++ +I + + ++W +++ G H L EEA++ ++ L N+
Sbjct: 379 CGELVKSK-LIFDRFPSKDIIMWNSIISGYASHG---LGEEALKVFCEMPLSGSTKPNEV 434
Query: 298 YYVVMSNVYAEAGKWEEVSRIRRLMKS 324
+V + + AG EE +I M+S
Sbjct: 435 TFVATLSACSYAGMVEEGLKIYESMES 461
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 145/344 (42%), Gaps = 54/344 (15%)
Query: 13 RHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCG 72
R AR +FD+MP R+I +WN +++ + G + AR +F MP+RNV SWT+++ G G
Sbjct: 65 RDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNG 124
Query: 73 MCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCN 132
+ A +F +M + N+V+ +L+ Q G ++ ++ + + +
Sbjct: 125 KVDVAESLFWKM----PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIH 180
Query: 133 ALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKP 192
L K G ++E +F+ M ER+V++W++M+ G+ +
Sbjct: 181 GL----CKEGRVDEAREIFDEMSERSVITWTTMVTGYGQN-------------------- 216
Query: 193 NYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV 252
VD R + +M + + ++ + GR+E+A E+
Sbjct: 217 ---------------NRVDDARKIFDVMPEKTEV-----SWTSMLMGYVQNGRIEDAEEL 256
Query: 253 IANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKW 312
M V P + A++ G I +A R + ND + + ++ G
Sbjct: 257 FEVMPVKP-VIACNAMISGLGQKGEIA---KARRVFDSMKERNDASWQTVIKIHERNGFE 312
Query: 313 EEVSRIRRLMKSRGVKKT-PGCSSI-TIDGVVHEFVAGDETHPQ 354
E + LM+ +GV+ T P SI ++ + G + H Q
Sbjct: 313 LEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQ 356
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 38/177 (21%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS 60
+L+ +Y CGE ++L+FD+ P +DI WN
Sbjct: 371 VLMTMYIKCGELVKSKLIFDRFPSKDIIMWN----------------------------- 401
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
S+I G A G+ EEALKVF EM GS KPNEVT VA L AC+ G +E G ++
Sbjct: 402 --SIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESM 459
Query: 120 KGNGFLRNV---YVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMH 172
+ ++ + Y C ++DM + G E + + M E W S++ H
Sbjct: 460 ESVFGVKPITAHYAC--MVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTH 514
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 121/301 (40%), Gaps = 56/301 (18%)
Query: 29 TWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDG 88
T N+ I HL +G + AR LF S +++ SW S++ G M +A K+F EM
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM---- 74
Query: 89 SKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGY 148
P+ RN+ N L+ Y+K G ++E
Sbjct: 75 --PD---------------------------------RNIISWNGLVSGYMKNGEIDEAR 99
Query: 149 RVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVG 208
+VF+ M ER VVSW++++ G+ + M V IG L G
Sbjct: 100 KVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQD----G 155
Query: 209 LVDKGRALLTIMRRDYGIVPGVEHYG--CLVDLLSRAGRLEEAREVIANMSVPPNRVVWG 266
+D L Y ++P ++ ++ L + GR++EARE+ MS + + W
Sbjct: 156 RIDDACKL-------YEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMS-ERSVITWT 207
Query: 267 ALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRG 326
++ G + + ++A + + + + M Y + G+ E+ + +M +
Sbjct: 208 TMVTGYGQNNRV---DDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKP 264
Query: 327 V 327
V
Sbjct: 265 V 265
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/475 (39%), Positives = 290/475 (61%), Gaps = 13/475 (2%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y CG + +F+++ ++ + +W +++ ++ + R++F MP+RN +W
Sbjct: 152 LMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAW 211
Query: 62 TSVIYGLAKCGMCEEALKVFSEME-KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
T ++ G G E L++ +EM + G N VT+ ++L ACAQ G+L G+ VH +A
Sbjct: 212 TVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYAL 271
Query: 121 GNGFL-------RNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHX 173
+ +V V AL+DMY KCG ++ VF MR+R VV+W+++ G AMH
Sbjct: 272 KKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHG 331
Query: 174 XXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKG-RALLTIMRRDYGIVPGVEH 232
MIR +KP+ +TF VL ACSH G+VD+G R ++ R YG+ P V+H
Sbjct: 332 KGRMVIDMFPQMIR-EVKPDDLTFTAVLSACSHSGIVDEGWRCFHSL--RFYGLEPKVDH 388
Query: 233 YGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLD 292
Y C+VDLL RAG +EEA ++ M VPPN VV G+LLG C +H + +AE R L ++
Sbjct: 389 YACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMS 448
Query: 293 LLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETH 352
N Y ++MSN+Y G+ + +R ++ RG++K PG SSI ++ VH F +GD +H
Sbjct: 449 PGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSH 508
Query: 353 PQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLE-DAKQKEIFLYRHSEKLALVYGLINT 411
P+ K I+ +++ +++ GY+PD S ++ E D ++KE L HSEKLA+ +GL+ T
Sbjct: 509 PRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAVCFGLLET 568
Query: 412 KPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
KP + + KNLR+C DCH+A K+VS++ +REI++RDRNRFH FK G+C+C DYW
Sbjct: 569 KPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 136/309 (44%), Gaps = 46/309 (14%)
Query: 10 GETRHARLM---FDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMP--QRNVRSWTSV 64
G+ HA L K P+ ++ N + + G + A+ LF +P +++ WT++
Sbjct: 25 GKELHAVLTTSGLKKAPRSYLS--NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTL 82
Query: 65 IYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGF 124
+ ++ G+ ++K+F EM + + ++V+VV + CA+L DL F + H A G
Sbjct: 83 LSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGV 142
Query: 125 LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVS----------------------- 161
L +V VCNAL+DMY KCG + E R+FE + E++VVS
Sbjct: 143 LTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHE 202
Query: 162 --------WSSMIVGFAMHXXXXXXXXXXXXMI-RVGMKPNYVTFIGVLHACSHVGLVDK 212
W+ M+ G+ M+ R G N+VT +L AC+ G +
Sbjct: 203 MPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVV 262
Query: 213 GRALLTIMRRDYGIVPGVEHYG------CLVDLLSRAGRLEEAREVIANMSVPPNRVVWG 266
GR + + ++ Y LVD+ ++ G ++ + V M N V W
Sbjct: 263 GRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMR-KRNVVTWN 321
Query: 267 ALLGGCRLH 275
AL G +H
Sbjct: 322 ALFSGLAMH 330
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/441 (40%), Positives = 264/441 (59%), Gaps = 1/441 (0%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D W+ ++ G + AR++F + +++V SWTS+I K E +FSE+
Sbjct: 252 DEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELV 311
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
+PNE T VL ACA L E GK VH + GF + ++L+DMY KCG +E
Sbjct: 312 GSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIE 371
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
V +G + +VSW+S+I G A + +++ G KP++VTF+ VL AC+
Sbjct: 372 SAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACT 431
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
H GLV+KG + + + +HY CLVDLL+R+GR E+ + VI+ M + P++ +W
Sbjct: 432 HAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLW 491
Query: 266 GALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSR 325
++LGGC + NI LAEEA + L K++ N YV M+N+YA AGKWEE ++R+ M+
Sbjct: 492 ASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEI 551
Query: 326 GVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDL 385
GV K PG S I H F+A D +HP I E +L KMK +GY+P TS+VL D+
Sbjct: 552 GVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDV 611
Query: 386 EDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIV 445
ED +++E +Y HSEKLA+ + +++T+ G +I++ KNLR C DCH A K +S I R+I
Sbjct: 612 EDEQKEENLVY-HSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKIT 670
Query: 446 VRDRNRFHCFKDGACTCKDYW 466
VRD RFHCF++G C+C DYW
Sbjct: 671 VRDSTRFHCFENGQCSCGDYW 691
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 154/291 (52%), Gaps = 6/291 (2%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL +YA CG AR +FD+MP RD+ +WN+M+ VG + AR LF M +++ SW
Sbjct: 126 LLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSW 185
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEK-DGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
T+++ G K EEAL ++S M++ S+PN TV + A A + + GK +H
Sbjct: 186 TAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIV 245
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
G + + ++L+DMY KCGC++E +F+ + E+ VVSW+SMI +
Sbjct: 246 RAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFS 305
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
++ +PN TF GVL+AC+ + + G+ + M R G P LVD+
Sbjct: 306 LFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTR-VGFDPYSFASSSLVDMY 364
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL 291
++ G +E A+ V+ P+ V W +L+GGC + +EA+++ L
Sbjct: 365 TKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCAQNGQ---PDEALKYFDLL 411
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%)
Query: 90 KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYR 149
KP T ++ C+Q LE GK VH + +GF+ + + N L+ MY KCG L + +
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 150 VFEGMRERTVVSWSSMIVGFA 170
VF+ M R + SW+ M+ G+A
Sbjct: 142 VFDEMPNRDLCSWNVMVNGYA 162
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/469 (38%), Positives = 275/469 (58%), Gaps = 35/469 (7%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ LY++C + A +FD++P+RD +WN++ S RN R+
Sbjct: 154 LMDLYSTCENSTDACKVFDEIPKRDTVSWNVLF-----------------SCYLRNKRT- 195
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGS---KPNEVTVVAVLVACAQLGDLEFGKSVHRF 118
+ L +F +M+ D KP+ VT + L ACA LG L+FGK VH F
Sbjct: 196 -------------RDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDF 242
Query: 119 AKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXX 178
NG + + N L+ MY +CG +++ Y+VF GMRER VVSW+++I G AM+
Sbjct: 243 IDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEA 302
Query: 179 XXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR-DYGIVPGVEHYGCLV 237
M++ G+ P T G+L ACSH GLV +G MR ++ I P + HYGC+V
Sbjct: 303 IEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVV 362
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG 297
DLL RA L++A +I +M + P+ +W LLG CR+H ++ L E + HL +L G
Sbjct: 363 DLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAG 422
Query: 298 YYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKG 357
YV++ N Y+ GKWE+V+ +R LMK + + PGCS+I + G VHEF+ D +HP+ +
Sbjct: 423 DYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEE 482
Query: 358 IFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSI 417
I++M ++ ++K+ GY+ + + L +LE ++K L HSEKLA+ +G++ T PG +I
Sbjct: 483 IYKMLAEINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTI 542
Query: 418 RIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
R+ KNLR C DCH K VS++ +R ++VRDR+RFH FK G+C+C D+W
Sbjct: 543 RVTKNLRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 6/200 (3%)
Query: 76 EALKVFSEMEKDGSKP-NEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNAL 134
E ++F + ++ S P N ++ L C + GDL G +H +GFL + + L
Sbjct: 95 EGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTL 154
Query: 135 IDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM---IRVGMK 191
+D+Y C + +VF+ + +R VSW+ + + + M + +K
Sbjct: 155 MDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVK 214
Query: 192 PNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEARE 251
P+ VT + L AC+++G +D G+ + + + G+ + LV + SR G +++A +
Sbjct: 215 PDGVTCLLALQACANLGALDFGKQVHDFIDEN-GLSGALNLSNTLVSMYSRCGSMDKAYQ 273
Query: 252 VIANMSVPPNRVVWGALLGG 271
V M N V W AL+ G
Sbjct: 274 VFYGMR-ERNVVSWTALISG 292
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 361 bits (926), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/419 (42%), Positives = 260/419 (62%), Gaps = 2/419 (0%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + A+ +F ++ RN SW ++I G A+ E+AL++F M +DG +P+ + ++
Sbjct: 210 GLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLF 269
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
AC+ G LE GK VH + +G + N L+DMY K G + + ++F+ + +R VV
Sbjct: 270 GACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVV 329
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
SW+S++ +A H M RVG++PN ++F+ VL ACSH GL+D+G +M
Sbjct: 330 SWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELM 389
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
++D GIVP HY +VDLL RAG L A I M + P +W ALL CR+HKN L
Sbjct: 390 KKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTEL 448
Query: 281 AEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDG 340
A H+ +LD + G +V++ N+YA G+W + +R+R+ MK GVKK P CS + I+
Sbjct: 449 GAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIEN 508
Query: 341 VVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSE 400
+H FVA DE HPQ + I WE++L K+K GY+PDTS V++ + D +++E+ L HSE
Sbjct: 509 AIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHV-DQQEREVNLQYHSE 567
Query: 401 KLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGA 459
K+AL + L+NT PG +I I KN+RVC DCH A KL S++ REI+VRD NRFH FKD +
Sbjct: 568 KIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDAS 626
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 155/321 (48%), Gaps = 8/321 (2%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G HA ++ + + DI N ++ G + AR +F MPQR+ +WT++I G +
Sbjct: 79 GRIVHAHIL-QSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYS 137
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
+ +AL F++M + G PNE T+ +V+ A A G +H F GF NV+
Sbjct: 138 QHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH 197
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
V +AL+D+Y + G +++ VF+ + R VSW+++I G A M+R G
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
+P++ ++ + ACS G +++G+ + M + + L+D+ +++G + +A
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG-NTLLDMYAKSGSIHDA 316
Query: 250 REVIANMSVPPNRVVWGALLGGCRLH---KNIVLAEEAMRHLSKLDLLNDGYYVVMSNVY 306
R++ ++ + V W +LL H K V E MR + N+ ++ +
Sbjct: 317 RKIFDRLA-KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP--NEISFLSVLTAC 373
Query: 307 AEAGKWEEVSRIRRLMKSRGV 327
+ +G +E LMK G+
Sbjct: 374 SHSGLLDEGWHYYELMKKDGI 394
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 98/226 (43%), Gaps = 18/226 (7%)
Query: 98 AVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER 157
+L C L G+ VH + F ++ + N L++MY KCG LEE +VFE M +R
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 158 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL 217
V+W+++I G++ H M+R G PN T V+ A + G L
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 218 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKN 277
+ G V L+DL +R G +++A+ V + N V W AL+ G H
Sbjct: 185 GFCVK-CGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALE-SRNDVSWNALIAG---HAR 239
Query: 278 IVLAEEAMRHLSKLDLLNDGY------YVVM-----SNVYAEAGKW 312
E+A+ +L DG+ Y + S + E GKW
Sbjct: 240 RSGTEKALELFQ--GMLRDGFRPSHFSYASLFGACSSTGFLEQGKW 283
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N ++ G + AR +F + +R+V SW S++ A+ G +EA+ F EM + G +
Sbjct: 301 NTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIR 360
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
PNE++ ++VL AC+ G L+ G + K +G + + ++D+ + G L R
Sbjct: 361 PNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRF 420
Query: 151 FEGMR-ERTVVSWSSMIVGFAMH 172
E M E T W +++ MH
Sbjct: 421 IEEMPIEPTAAIWKALLNACRMH 443
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 358 bits (920), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 178/444 (40%), Positives = 272/444 (61%), Gaps = 2/444 (0%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ D+ N +I G + + +F + + SW+S++ A GM E L +F
Sbjct: 164 EADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRG 223
Query: 84 M-EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG 142
M + K E +V+ L+ACA G L G S+H F N N+ V +L+DMYVKCG
Sbjct: 224 MCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCG 283
Query: 143 CLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLH 202
CL++ +F+ M +R +++S+MI G A+H MI+ G++P++V ++ VL+
Sbjct: 284 CLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLN 343
Query: 203 ACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR 262
ACSH GLV +GR + M ++ + P EHYGCLVDLL RAG LEEA E I ++ + N
Sbjct: 344 ACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKND 403
Query: 263 VVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLM 322
V+W L CR+ +NI L + A + L KL N G Y+++SN+Y++ W++V+R R +
Sbjct: 404 VIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEI 463
Query: 323 KSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVL 382
+G+K+TPG S + + G H FV+ D +HP+ K I++M ++ ++K +GY PD + +L
Sbjct: 464 AIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQIL 523
Query: 383 LDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENR 442
L++++ ++KE L HS+K+A+ +GL+ T PG I+I +NLR+C DCH K +S I R
Sbjct: 524 LNVDEEEKKE-RLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYER 582
Query: 443 EIVVRDRNRFHCFKDGACTCKDYW 466
EIVVRDRNRFH FK G C+CKDYW
Sbjct: 583 EIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 183/433 (42%), Gaps = 48/433 (11%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A +F + + ++I G EEAL ++EM + G++P+ T +L AC +
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
L + GK +H G +V+V N+LI+MY +CG +E VFE + +T SWSSM
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSM 204
Query: 166 IVGFA-MHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDY 224
+ A M +K + L AC++ G ++ G ++ + R+
Sbjct: 205 VSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNI 264
Query: 225 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEA 284
+ + LVD+ + G L++A + M N + + A++ G LH E A
Sbjct: 265 SELNIIVQTS-LVDMYVKCGCLDKALHIFQKME-KRNNLTYSAMISGLALHGE---GESA 319
Query: 285 MRHLSKLDLLNDGY------YVVMSNVYAEAGKWEEVSRI-RRLMKSRGVKKTPGCSSIT 337
+R SK ++ +G YV + N + +G +E R+ ++K V+ T
Sbjct: 320 LRMFSK--MIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCL 377
Query: 338 ID-----GVVHEFVAGDETHPQAKGIFEMWEKLLVK-----------------MKMKGYI 375
+D G++ E + ++ P K +W L + +K+ +
Sbjct: 378 VDLLGRAGLLEEALETIQSIPIEKNDV-IWRTFLSQCRVRQNIELGQIAAQELLKLSSHN 436
Query: 376 PDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSI--------RIMKNLRVCE 427
P +++ +L Q + R ++A + GL T PG SI R + R
Sbjct: 437 PGDYLLISNLYSQGQMWDDVARTRTEIA-IKGLKQT-PGFSIVELKGKTHRFVSQDRSHP 494
Query: 428 DCHAAFKLVSEIE 440
C +K++ ++E
Sbjct: 495 KCKEIYKMLHQME 507
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 357 bits (917), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 184/445 (41%), Positives = 263/445 (59%), Gaps = 3/445 (0%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+R ++ + +G V A +FS + +++ +W++++ G A+ G E A+K+F E
Sbjct: 425 ERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGE 484
Query: 84 MEKDGSKPNEVTVVAVLVACAQL-GDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG 142
+ K G KPNE T ++L CA + GK H FA + ++ V +AL+ MY K G
Sbjct: 485 LTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKG 544
Query: 143 CLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLH 202
+E VF+ RE+ +VSW+SMI G+A H M + +K + VTFIGV
Sbjct: 545 NIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFA 604
Query: 203 ACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR 262
AC+H GLV++G IM RD I P EH C+VDL SRAG+LE+A +VI NM P
Sbjct: 605 ACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGS 664
Query: 263 VVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLM 322
+W +L CR+HK L A + + + YV++SN+YAE+G W+E +++R+LM
Sbjct: 665 TIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLM 724
Query: 323 KSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVL 382
R VKK PG S I + + F+AGD +HP I+ E L ++K GY PDTS VL
Sbjct: 725 NERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVL 784
Query: 383 LDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENR 442
D++D + KE L +HSE+LA+ +GLI T G + I+KNLRVC DCH KL+++IE R
Sbjct: 785 QDIDD-EHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEER 843
Query: 443 EIVVRDRNRFHCF-KDGACTCKDYW 466
EIVVRD NRFH F DG C+C D+W
Sbjct: 844 EIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 118/246 (47%), Gaps = 15/246 (6%)
Query: 57 NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH 116
NV SWT++I G + EEA+ +FSEM++ G +PNE T +L A + E VH
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VH 416
Query: 117 RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXX 176
+ R+ V AL+D YVK G +EE +VF G+ ++ +V+WS+M+ G+A
Sbjct: 417 AQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETE 476
Query: 177 XXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGL-VDKGRALLTIMRRDYGIVPGVEHYGC 235
+ + G+KPN TF +L+ C+ + +G+ + I ++ C
Sbjct: 477 AAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQF-----HGFAIKSRLDSSLC 531
Query: 236 ----LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL 291
L+ + ++ G +E A EV + V W +++ G H + A + + + K
Sbjct: 532 VSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYAQHGQAMKALDVFKEMKKR 590
Query: 292 DLLNDG 297
+ DG
Sbjct: 591 KVKMDG 596
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 118/226 (52%), Gaps = 2/226 (0%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A +LF P R+ S+ S+++G ++ G +EA ++F + + G + + +VL A
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
L D FG+ +H GFL +V V +L+D Y+K ++G +VF+ M+ER VV+W+++
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
I G+A + M G +PN TF L + G+ +G + T++ ++ G
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN-G 224
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ + L++L + G + +AR ++ + + + V W +++ G
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKAR-ILFDKTEVKSVVTWNSMISG 269
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 1/226 (0%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
R +F M +RNV +WT++I G A+ M +E L +F M+ +G++PN T A L A+
Sbjct: 147 GRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAE 206
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
G G VH NG + + V N+LI++Y+KCG + + +F+ ++VV+W+SM
Sbjct: 207 EGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSM 266
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
I G+A + M ++ + +F V+ C+++ + L + + YG
Sbjct: 267 ISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVK-YG 325
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ L+ S+ + +A + + N V W A++ G
Sbjct: 326 FLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISG 371
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 118/248 (47%), Gaps = 7/248 (2%)
Query: 25 RDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM 84
+ I N +I + G V AR LF ++V +W S+I G A G+ EAL +F M
Sbjct: 227 KTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM 286
Query: 85 EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCL 144
+ + +E + +V+ CA L +L F + +H GFL + + AL+ Y KC +
Sbjct: 287 RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAM 346
Query: 145 EEGYRVFEGMR-ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
+ R+F+ + VVSW++MI GF + M R G++PN T+ +L A
Sbjct: 347 LDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
Query: 204 CSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRV 263
+ ++ +++ +Y V L+D + G++EEA +V + + + V
Sbjct: 407 ---LPVISPSEVHAQVVKTNYERSSTVGT--ALLDAYVKLGKVEEAAKVFSGID-DKDIV 460
Query: 264 VWGALLGG 271
W A+L G
Sbjct: 461 AWSAMLAG 468
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 357 bits (917), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 171/419 (40%), Positives = 252/419 (60%), Gaps = 2/419 (0%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGD 108
+F S+PQR SWT++I G + G+ LK+F++M + ++ T VL A A
Sbjct: 408 IFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFAS 467
Query: 109 LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVG 168
L GK +H F +G L NV+ + L+DMY KCG +++ +VFE M +R VSW+++I
Sbjct: 468 LLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISA 527
Query: 169 FAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVP 228
A + MI G++P+ V+ +GVL ACSH G V++G M YGI P
Sbjct: 528 HADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITP 587
Query: 229 GVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHL 288
+HY C++DLL R GR EA +++ M P+ ++W ++L CR+HKN LAE A L
Sbjct: 588 KKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKL 647
Query: 289 SKLDLLND-GYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVA 347
++ L D YV MSN+YA AG+WE+V +++ M+ RG+KK P S + ++ +H F +
Sbjct: 648 FSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSS 707
Query: 348 GDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYG 407
D+THP I +L +++ +GY PDTS V+ D+++ + E Y HSE+LA+ +
Sbjct: 708 NDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKY-HSERLAVAFA 766
Query: 408 LINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
LI+T G I +MKNLR C DCHAA KL+S+I REI VRD +RFH F +G C+C DYW
Sbjct: 767 LISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 153/359 (42%), Gaps = 56/359 (15%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G+ AR ++D+MP ++ + N MI+ + G V +ARDLF +MP R V +WT ++ A
Sbjct: 62 GQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYA 121
Query: 70 KCGMCEEALKVFSEMEKDGS--KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRN 127
+ +EA K+F +M + S P+ VT +L C VH FA GF N
Sbjct: 122 RNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTN 181
Query: 128 VY--VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM 185
+ V N L+ Y + L+ +FE + E+ V+++++I G+ M
Sbjct: 182 PFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKM 241
Query: 186 IRVGMKPNYVTFIGVLHACSHVGLVD-------KGRALLTIMRRDYGIVPGVEHYGCLVD 238
+ G +P+ TF GVL A VGL D ++ T RD + + +D
Sbjct: 242 RQSGHQPSDFTFSGVLKAV--VGLHDFALGQQLHALSVTTGFSRDASVGNQI------LD 293
Query: 239 LLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY 298
S+ R+ E R + M +LD ++ Y
Sbjct: 294 FYSKHDRVLETRMLFDEM--------------------------------PELDFVS--Y 319
Query: 299 YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKT--PGCSSITIDGVVHEFVAGDETHPQA 355
VV+S+ Y++A ++E R M+ G + P + ++I + G + H QA
Sbjct: 320 NVVISS-YSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQA 377
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 120/274 (43%), Gaps = 14/274 (5%)
Query: 3 LHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWT 62
LH +A G+ HA L RD + N ++ V R LF MP+ + S+
Sbjct: 263 LHDFA-LGQQLHA-LSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYN 320
Query: 63 SVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH---RFA 119
VI ++ E +L F EM+ G +L A L L+ G+ +H A
Sbjct: 321 VVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLA 380
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
+ L +V N+L+DMY KC EE +F+ + +RT VSW+++I G+
Sbjct: 381 TADSIL---HVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGL 437
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M ++ + TF VL A + + G+ L + R G + V LVD+
Sbjct: 438 KLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRS-GNLENVFSGSGLVDM 496
Query: 240 LSRAGRLEEAREVIANMSVPPNR--VVWGALLGG 271
++ G +++A +V M P+R V W AL+
Sbjct: 497 YAKCGSIKDAVQVFEEM---PDRNAVSWNALISA 527
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 117/259 (45%), Gaps = 10/259 (3%)
Query: 16 RLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCE 75
+L FD P ++ N+++ V + A LF +P+++ ++ ++I G K G+
Sbjct: 175 KLGFDTNPFLTVS--NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYT 232
Query: 76 EALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALI 135
E++ +F +M + G +P++ T VL A L D G+ +H + GF R+ V N ++
Sbjct: 233 ESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQIL 292
Query: 136 DMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYV 195
D Y K + E +F+ M E VS++ +I ++ M +G
Sbjct: 293 DFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNF 352
Query: 196 TFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYG-CLVDLLSRAGRLEEAREVIA 254
F +L +++ + GR L + + H G LVD+ ++ EEA +
Sbjct: 353 PFATMLSIAANLSSLQMGRQLHC--QALLATADSILHVGNSLVDMYAKCEMFEEAELIFK 410
Query: 255 NMSVPPNR--VVWGALLGG 271
++ P R V W AL+ G
Sbjct: 411 SL---PQRTTVSWTALISG 426
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + A +F MP RN SW ++I A G E A+ F++M + G +P+ V+++ VL
Sbjct: 501 GSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVL 560
Query: 101 VACAQLGDLEFGKSVHRFAK---GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR-E 156
AC+ G +E G + G + Y C ++D+ + G E ++ + M E
Sbjct: 561 TACSHCGFVEQGTEYFQAMSPIYGITPKKKHYAC--MLDLLGRNGRFAEAEKLMDEMPFE 618
Query: 157 RTVVSWSSMIVGFAMH 172
+ WSS++ +H
Sbjct: 619 PDEIMWSSVLNACRIH 634
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 356 bits (914), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 178/426 (41%), Positives = 261/426 (61%), Gaps = 2/426 (0%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G V A+ LF M N+ W ++I G AK G EA+ +F EM +P+ +++ + +
Sbjct: 271 GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAI 330
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
ACAQ+G LE +S++ + + + +V++ +ALIDM+ KCG +E VF+ +R VV
Sbjct: 331 SACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVV 390
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
WS+MIVG+ +H M R G+ PN VTF+G+L AC+H G+V +G M
Sbjct: 391 VWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM 450
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
D+ I P +HY C++DLL RAG L++A EVI M V P VWGALL C+ H+++ L
Sbjct: 451 A-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVEL 509
Query: 281 AEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDG 340
E A + L +D N G+YV +SN+YA A W+ V+ +R MK +G+ K GCS + + G
Sbjct: 510 GEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRG 569
Query: 341 VVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSE 400
+ F GD++HP+ + I E + ++K G++ + L DL D + +E L HSE
Sbjct: 570 RLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEET-LCSHSE 628
Query: 401 KLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGAC 460
++A+ YGLI+T G +RI KNLR C +CHAA KL+S++ +REIVVRD NRFH FKDG C
Sbjct: 629 RIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVC 688
Query: 461 TCKDYW 466
+C DYW
Sbjct: 689 SCGDYW 694
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 137/263 (52%), Gaps = 10/263 (3%)
Query: 16 RLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFS--SMPQRNVRSWTSVIYGLAKCGM 73
RL FD D+ N +IA +G+AR +F +P+R + SWT+++ A+ G
Sbjct: 147 RLGFDA----DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 202
Query: 74 CEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNA 133
EAL++FS+M K KP+ V +V+VL A L DL+ G+S+H G + +
Sbjct: 203 PMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS 262
Query: 134 LIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPN 193
L MY KCG + +F+ M+ ++ W++MI G+A + MI ++P+
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPD 322
Query: 194 YVTFIGVLHACSHVGLVDKGRALLT-IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV 252
++ + AC+ VG +++ R++ + R DY V L+D+ ++ G +E AR +
Sbjct: 323 TISITSAISACAQVGSLEQARSMYEYVGRSDYR--DDVFISSALIDMFAKCGSVEGAR-L 379
Query: 253 IANMSVPPNRVVWGALLGGCRLH 275
+ + ++ + VVW A++ G LH
Sbjct: 380 VFDRTLDRDVVVWSAMIVGYGLH 402
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 124/236 (52%), Gaps = 6/236 (2%)
Query: 39 NVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVA 98
+ G + AR +F +P+ + W ++I G ++ ++AL ++S M+ P+ T
Sbjct: 65 SFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPH 124
Query: 99 VLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEG--MRE 156
+L AC+ L L+ G+ VH GF +V+V N LI +Y KC L VFEG + E
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184
Query: 157 RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL 216
RT+VSW++++ +A + M ++ +KP++V + VL+A + + + +GR++
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244
Query: 217 -LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
++++ I P + L + ++ G++ A+ + M PN ++W A++ G
Sbjct: 245 HASVVKMGLEIEPDL--LISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMISG 297
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 9/173 (5%)
Query: 7 ASCGETRHARLMFDKMPQRDIATWNIMIAHLINV----GYVGAARDLFSSMPQRNVRSWT 62
A G AR M++ + + D + + LI++ G V AR +F R+V W+
Sbjct: 334 AQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWS 393
Query: 63 SVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG-KSVHRFAKG 121
++I G G EA+ ++ ME+ G PN+VT + +L+AC G + G +R A
Sbjct: 394 AMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADH 453
Query: 122 N-GFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMH 172
+ Y C +ID+ + G L++ Y V + M + V W +++ H
Sbjct: 454 KINPQQQHYAC--VIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 356 bits (914), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 182/462 (39%), Positives = 270/462 (58%), Gaps = 2/462 (0%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
Y G A F+ MP + + N MI VG + AR +F M R+ +W +I
Sbjct: 244 YTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMI 303
Query: 66 YGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL 125
+ G EAL +F++M+K G +P+ +++++L CA L L++G+ VH F
Sbjct: 304 KAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFD 363
Query: 126 RNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM 185
+VYV + L+ MYVKCG L + VF+ + ++ W+S+I G+A H M
Sbjct: 364 DDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEM 423
Query: 186 IRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGR 245
G PN VT I +L ACS+ G +++G + M + + P VEHY C VD+L RAG+
Sbjct: 424 PSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQ 483
Query: 246 LEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNV 305
+++A E+I +M++ P+ VWGALLG C+ H + LAE A + L + + N G YV++S++
Sbjct: 484 VDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSI 543
Query: 306 YAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGD-ETHPQAKGIFEMWEK 364
A KW +V+ +R+ M++ V K PGCS I + VH F G + HP+ I M EK
Sbjct: 544 NASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEK 603
Query: 365 LLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLR 424
++ GY PD S VL D+ D ++K L RHSE+LA+ YGL+ G+ IR+MKNLR
Sbjct: 604 TDGLLREAGYSPDCSHVLHDV-DEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLR 662
Query: 425 VCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
VC DCHAA KL+S++ REI++RD NRFH F +G C+C+DYW
Sbjct: 663 VCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 89/164 (54%), Gaps = 8/164 (4%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
Y S G + AR +FD+M +R++ +WN +++ I + AR++F MP+RNV SWT+++
Sbjct: 58 YFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMV 117
Query: 66 YGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL 125
G + GM EA +F M + NEV+ + G ++ + ++ +
Sbjct: 118 KGYMQEGMVGEAESLFWRM----PERNEVSWTVMFGGLIDDGRIDKARKLYDMMP----V 169
Query: 126 RNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGF 169
++V +I + G ++E +F+ MRER VV+W++MI G+
Sbjct: 170 KDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGY 213
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 130/320 (40%), Gaps = 48/320 (15%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G ARL+FD+M +R++ TW MI V AR LF MP++ SWTS++ G
Sbjct: 186 GRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYT 245
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
G E+A + F M ++ V
Sbjct: 246 LSGRIEDAEEFFEVMP---------------------------------------MKPVI 266
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
CNA+I + + G + + RVF+ M +R +W MI + M + G
Sbjct: 267 ACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQG 326
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
++P++ + I +L C+ + + GR + + R V L+ + + G L +A
Sbjct: 327 VRPSFPSLISILSVCATLASLQYGRQVHAHLVR-CQFDDDVYVASVLMTMYVKCGELVKA 385
Query: 250 REVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL----DLLNDGYYVVMSNV 305
+ V S + ++W +++ G H L EEA++ ++ + N + +
Sbjct: 386 KLVFDRFS-SKDIIMWNSIISGYASHG---LGEEALKIFHEMPSSGTMPNKVTLIAILTA 441
Query: 306 YAEAGKWEEVSRIRRLMKSR 325
+ AGK EE I M+S+
Sbjct: 442 CSYAGKLEEGLEIFESMESK 461
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 36/157 (22%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS 60
+L+ +Y CGE A+L+FD+ +DI WN
Sbjct: 371 VLMTMYVKCGELVKAKLVFDRFSSKDIIMWN----------------------------- 401
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
S+I G A G+ EEALK+F EM G+ PN+VT++A+L AC+ G LE G + +
Sbjct: 402 --SIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESME 459
Query: 121 GNGFLRNV---YVCNALIDMYVKCGCLEEGYRVFEGM 154
+ Y C +DM + G +++ + E M
Sbjct: 460 SKFCVTPTVEHYSCT--VDMLGRAGQVDKAMELIESM 494
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 97/248 (39%), Gaps = 49/248 (19%)
Query: 34 IAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNE 93
I+ L +G + AR F S+ + + SW S++ G G+ +EA ++F EM +
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSE------- 76
Query: 94 VTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEG 153
RNV N L+ Y+K + E VFE
Sbjct: 77 --------------------------------RNVVSWNGLVSGYIKNRMIVEARNVFEL 104
Query: 154 MRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKG 213
M ER VVSW++M+ G+ M V F G++ G +DK
Sbjct: 105 MPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDD----GRIDKA 160
Query: 214 RALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCR 273
R L +M V V ++ L R GR++EAR + M N V W ++ G R
Sbjct: 161 RKLYDMMP-----VKDVVASTNMIGGLCREGRVDEARLIFDEMR-ERNVVTWTTMITGYR 214
Query: 274 LHKNIVLA 281
+ + +A
Sbjct: 215 QNNRVDVA 222
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 356 bits (913), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 181/443 (40%), Positives = 263/443 (59%), Gaps = 3/443 (0%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ D+ + +I +G A +F M + W S+I G A+ + AL++F
Sbjct: 191 ESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKR 250
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M++ G + T+ +VL AC L LE G H + +++ + NAL+DMY KCG
Sbjct: 251 MKRAGFIAEQATLTSVLRACTGLALLELGMQAH--VHIVKYDQDLILNNALVDMYCKCGS 308
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
LE+ RVF M+ER V++WS+MI G A + M G KPNY+T +GVL A
Sbjct: 309 LEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFA 368
Query: 204 CSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRV 263
CSH GL++ G M++ YGI P EHYGC++DLL +AG+L++A +++ M P+ V
Sbjct: 369 CSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAV 428
Query: 264 VWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMK 323
W LLG CR+ +N+VLAE A + + LD + G Y ++SN+YA + KW+ V IR M+
Sbjct: 429 TWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMR 488
Query: 324 SRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLL 383
RG+KK PGCS I ++ +H F+ GD +HPQ + + +L+ ++ GY+P+T+ VL
Sbjct: 489 DRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQ 548
Query: 384 DLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENRE 443
DLE +Q E L HSEKLAL +GL+ IRI KNLR+C DCH KL S++E R
Sbjct: 549 DLE-GEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRS 607
Query: 444 IVVRDRNRFHCFKDGACTCKDYW 466
IV+RD R+H F+DG C+C DYW
Sbjct: 608 IVIRDPIRYHHFQDGKCSCGDYW 630
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 120/242 (49%), Gaps = 9/242 (3%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N++I + + A LF MPQRNV SWT++I +KC + ++AL++ M +D +
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
PN T +VL +C + D+ + +H G +V+V +ALID++ K G E+ V
Sbjct: 160 PNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 216
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
F+ M + W+S+I GFA + M R G T VL AC+ + L+
Sbjct: 217 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 276
Query: 211 DKG-RALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALL 269
+ G +A + I++ D ++ LVD+ + G LE+A V M + + W ++
Sbjct: 277 ELGMQAHVHIVKYDQDLILN----NALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMI 331
Query: 270 GG 271
G
Sbjct: 332 SG 333
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 125/285 (43%), Gaps = 39/285 (13%)
Query: 77 ALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALID 136
A+K ++ G + T ++ C + G + R NG +++ N LI+
Sbjct: 45 AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLIN 104
Query: 137 MYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVT 196
MYVK L + +++F+ M +R V+SW++MI ++ M+R ++PN T
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164
Query: 197 FIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM 256
+ VL +C+ G+ D I++ G+ V L+D+ ++ G E+A V M
Sbjct: 165 YSSVLRSCN--GMSDVRMLHCGIIKE--GLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220
Query: 257 SVPPNRVVWGALLGGC--------------RLHKNIVLAEEA-----MRHLSKLDLLNDG 297
V + +VW +++GG R+ + +AE+A +R + L LL G
Sbjct: 221 -VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 279
Query: 298 YY-----------VVMSN----VYAEAGKWEEVSRIRRLMKSRGV 327
++++N +Y + G E+ R+ MK R V
Sbjct: 280 MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDV 324
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 78/169 (46%), Gaps = 37/169 (21%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y CG A +F++M +RD+ TW+ MI+ L GY
Sbjct: 299 LVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGY------------------- 339
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK- 120
+EALK+F M+ G+KPN +T+V VL AC+ G LE G R K
Sbjct: 340 ------------SQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKK 387
Query: 121 --GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMI 166
G +R Y C +ID+ K G L++ ++ M E V+W +++
Sbjct: 388 LYGIDPVREHYGC--MIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 355 bits (911), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 175/421 (41%), Positives = 253/421 (60%), Gaps = 1/421 (0%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A+ +F M Q+NV SWT+++ G + G EEA+K+F +M++ G P+ T+ + ACA
Sbjct: 324 AKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACAN 383
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
+ LE G H A +G + V V N+L+ +Y KCG +++ R+F M R VSW++M
Sbjct: 384 VSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAM 443
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
+ +A M++ G+KP+ VT GV+ ACS GLV+KG+ +M +YG
Sbjct: 444 VSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYG 503
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
IVP + HY C++DL SR+GRLEEA I M PP+ + W LL CR N+ + + A
Sbjct: 504 IVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAA 563
Query: 286 RHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEF 345
L +LD + Y ++S++YA GKW+ V+++RR M+ + VKK PG S I G +H F
Sbjct: 564 ESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSF 623
Query: 346 VAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALV 405
A DE+ P I+ E+L K+ GY PDTS V D+E+A + ++ Y HSE+LA+
Sbjct: 624 SADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNY-HSERLAIA 682
Query: 406 YGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDY 465
+GLI G IR+ KNLRVC DCH A K +S + REI+VRD RFH FKDG C+C D+
Sbjct: 683 FGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDF 742
Query: 466 W 466
W
Sbjct: 743 W 743
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 185/388 (47%), Gaps = 29/388 (7%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL++YA+ G A+ +F + R+ +N ++ L+ G + A LF M + +V SW
Sbjct: 180 LLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSV-SW 238
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I GLA+ G+ +EA++ F EM+ G K ++ +VL AC LG + GK +H
Sbjct: 239 AAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIR 298
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
F ++YV +ALIDMY KC CL VF+ M+++ VVSW++M+VG+
Sbjct: 299 TNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKI 358
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHY----GCLV 237
M R G+ P++ T + AC++V +++G I G+ HY LV
Sbjct: 359 FLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQF-----HGKAITSGLIHYVTVSNSLV 413
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG 297
L + G ++++ + M+V + V W A++ V + + + L DG
Sbjct: 414 TLYGKCGDIDDSTRLFNEMNV-RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDG 472
Query: 298 YYVVMSNVY---AEAGKWEEVSRIRRLMKSR-GVKKTPGCSSITID-----GVVHE---F 345
V ++ V + AG E+ R +LM S G+ + G S ID G + E F
Sbjct: 473 --VTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRF 530
Query: 346 VAGDETHPQAKGIFEMWEKLLVKMKMKG 373
+ G P A G W LL + KG
Sbjct: 531 INGMPFPPDAIG----WTTLLSACRNKG 554
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 139/319 (43%), Gaps = 42/319 (13%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++H YA + +AR +FD++PQ ++ +WN ++ G + F +P R+ +W
Sbjct: 47 IVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTW 106
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKP-NEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
+I G + G+ A+K ++ M +D S VT++ +L + G + GK +H
Sbjct: 107 NVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVI 166
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV--------------------- 159
GF + V + L+ MY GC+ + +VF G+ +R
Sbjct: 167 KLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQ 226
Query: 160 ---------VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
VSW++MI G A + M G+K + F VL AC +G +
Sbjct: 227 LFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAI 286
Query: 211 DKGRAL-LTIMRRDYG--IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGA 267
++G+ + I+R ++ I G L+D+ + L A+ V M N V W A
Sbjct: 287 NEGKQIHACIIRTNFQDHIYVG----SALIDMYCKCKCLHYAKTVFDRMK-QKNVVSWTA 341
Query: 268 LLGGCRLHKNIVLAEEAMR 286
++ G + AEEA++
Sbjct: 342 MVVG---YGQTGRAEEAVK 357
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 353 bits (907), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 181/431 (41%), Positives = 279/431 (64%), Gaps = 12/431 (2%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + +A LF MP R+V SW ++I GL EA++++ ME +G + +EVTVVA L
Sbjct: 158 GDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAAL 217
Query: 101 VACAQLGDLEFGKSV-HRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR-ERT 158
AC+ LGD++ G+++ H ++ N V V NA IDMY KCG +++ Y+VFE +++
Sbjct: 218 GACSHLGDVKEGENIFHGYSNDN-----VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKS 272
Query: 159 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT 218
VV+W++MI GFA+H + G+KP+ V+++ L AC H GLV+ G ++
Sbjct: 273 VVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFN 332
Query: 219 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNI 278
M G+ ++HYGC+VDLLSRAGRL EA ++I +MS+ P+ V+W +LLG ++ ++
Sbjct: 333 NMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDV 391
Query: 279 VLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITI 338
+AE A R + ++ + NDG +V++SNVYA G+W++V R+R M+S+ VKK PG S I
Sbjct: 392 EMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEA 451
Query: 339 DGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRH 398
G +HEF D++H Q + I+E +++ K++ GY+ T +VL D+ + ++KE L H
Sbjct: 452 KGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGE-EEKENALCYH 510
Query: 399 SEKLALVYGLI---NTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCF 455
SEKLA+ YGL+ +R++ NLR+C DCH FK +S+I REI+VRDR RFH F
Sbjct: 511 SEKLAVAYGLMMMDGADEESPVRVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRF 570
Query: 456 KDGACTCKDYW 466
KDG+C+C+D+W
Sbjct: 571 KDGSCSCRDFW 581
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 106/263 (40%), Gaps = 17/263 (6%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGS------KPNEV 94
G + A +F +P+ W ++I G A A + M + S + + +
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 95 TVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM 154
T L ACA+ +H G + +C L+D Y K G L Y++F+ M
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEM 170
Query: 155 RERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGR 214
R V SW+++I G M G++ + VT + L ACSH+G V +G
Sbjct: 171 PVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGE 230
Query: 215 ALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRL 274
+ D IV +D+ S+ G +++A +V + + V W ++ G +
Sbjct: 231 NIFHGYSNDNVIVSNAA-----IDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAV 285
Query: 275 HKNIVLAEEAMRHLSKLDLLNDG 297
H EA R L D L D
Sbjct: 286 HG------EAHRALEIFDKLEDN 302
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 353 bits (906), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 185/471 (39%), Positives = 265/471 (56%), Gaps = 10/471 (2%)
Query: 6 YASCGETRHARL-------MFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNV 58
+ +CG R+ F + + + N +I+ + + A+ F S+ ++N+
Sbjct: 380 FKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNL 439
Query: 59 RSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRF 118
S+ + + G + E+A K+ SE+ + + T ++L A +G + G+ +H
Sbjct: 440 VSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQ 499
Query: 119 AKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXX 178
G N VCNALI MY KCG ++ RVF M R V+SW+SMI GFA H
Sbjct: 500 VVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRV 559
Query: 179 XXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVD 238
MI G+KPN VT++ +L ACSHVGLV +G M D+ I P +EHY C+VD
Sbjct: 560 LETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVD 619
Query: 239 LLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY 298
LL RAG L +A E I M + +VW LG CR+H N L + A R + +LD
Sbjct: 620 LLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAA 679
Query: 299 YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGI 358
Y+ +SN+YA AGKWEE + +RR MK R + K GCS I + +H+F GD HP A I
Sbjct: 680 YIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQI 739
Query: 359 FEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEI---FLYRHSEKLALVYGLINTKPGM 415
++ ++L+ ++K GY+PDT +VL LE+ + LY+HSEK+A+ +GLI+T
Sbjct: 740 YDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSR 799
Query: 416 SIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
+R+ KNLRVC DCH A K +S + REIV+RD NRFH FKDG C+C DYW
Sbjct: 800 PVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 167/371 (45%), Gaps = 24/371 (6%)
Query: 10 GETRHARLM-FDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSM---PQRNVRSWTSVI 65
G+ HARL+ FD P D +N +I+ G A D+F +M +R+V SW++++
Sbjct: 81 GKLVHARLIEFDIEP--DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMM 138
Query: 66 YGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNG-F 124
G +A+KVF E + G PN+ AV+ AC+ + G+ F G F
Sbjct: 139 ACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHF 198
Query: 125 LRNVYVCNALIDMYVKC-GCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXX 183
+V V +LIDM+VK E Y+VF+ M E VV+W+ MI
Sbjct: 199 ESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFL 258
Query: 184 XMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRA 243
M+ G + + T V AC+ + + G+ L + R G+V VE LVD+ ++
Sbjct: 259 DMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS-GLVDDVE--CSLVDMYAKC 315
Query: 244 ---GRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY-- 298
G +++ R+V M + + W AL+ G KN LA EA+ S +++ G+
Sbjct: 316 SADGSVDDCRKVFDRME-DHSVMSWTALITG--YMKNCNLATEAINLFS--EMITQGHVE 370
Query: 299 --YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAK 356
+ S+ + G + R+ + + + K+ +S + V+ FV D +
Sbjct: 371 PNHFTFSSAFKACGNLSD-PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQR 429
Query: 357 GIFEMWEKLLV 367
+ EK LV
Sbjct: 430 AFESLSEKNLV 440
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 128/252 (50%), Gaps = 14/252 (5%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A +F M + NV +WT +I + G EA++ F +M G + ++ T+ +V ACA+
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKC---GCLEEGYRVFEGMRERTVVSW 162
L +L GK +H +A +G + +V +L+DMY KC G +++ +VF+ M + +V+SW
Sbjct: 282 LENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 339
Query: 163 SSMIVGFAMH-XXXXXXXXXXXXMIRVG-MKPNYVTFIGVLHACSHVGLVDKGRALL-TI 219
+++I G+ + MI G ++PN+ TF AC ++ G+ +L
Sbjct: 340 TALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQA 399
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIV 279
+R G+ ++ + ++ R+E+A+ ++S N V + L G + N
Sbjct: 400 FKR--GLASNSSVANSVISMFVKSDRMEDAQRAFESLS-EKNLVSYNTFLDGTCRNLNF- 455
Query: 280 LAEEAMRHLSKL 291
E+A + LS++
Sbjct: 456 --EQAFKLLSEI 465
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 113/254 (44%), Gaps = 16/254 (6%)
Query: 77 ALKVFSEMEKDGSKP-NEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALI 135
A+ M +DG +P + VT ++L +C + D GK VH + + N+LI
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 136 DMYVKCGCLEEGYRVFEGMR---ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKP 192
+Y K G + VFE MR +R VVSWS+M+ + + + +G+ P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 193 NYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGC-LVDLLSRA-GRLEEAR 250
N + V+ ACS+ V GR L + + G GC L+D+ + E A
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKT-GHFESDVCVGCSLIDMFVKGENSFENAY 223
Query: 251 EVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY---YVVMSNVYA 307
+V MS N V W ++ C + EA+R LD++ G+ +S+V++
Sbjct: 224 KVFDKMS-ELNVVTWTLMITRC---MQMGFPREAIRFF--LDMVLSGFESDKFTLSSVFS 277
Query: 308 EAGKWEEVSRIRRL 321
+ E +S ++L
Sbjct: 278 ACAELENLSLGKQL 291
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 350 bits (899), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 174/437 (39%), Positives = 263/437 (60%), Gaps = 5/437 (1%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM-EKDGS 89
N++I L+ +G G A+ + + +NV +W +I G + EEALK M
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 90 KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYR 149
KPN+ + + L ACA+LGDL K VH +G N + +AL+D+Y KCG +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 150 VFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGL 209
VF ++ V W++MI GFA H M + P+ +TF+G+L CSH GL
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 210 VDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALL 269
+++G+ +M R + I P +EHYG +VDLL RAGR++EA E+I +M + P+ V+W +LL
Sbjct: 282 LEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Query: 270 GGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKK 329
R +KN L E A+++LSK G YV++SN+Y+ KWE ++R LM G++K
Sbjct: 342 SSSRTYKNPELGEIAIQNLSK---AKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRK 398
Query: 330 TPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAK 389
G S + G++H F AGD +H + K I+++ E L+ K K +G++ DT +VL+D+ + +
Sbjct: 399 AKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEE 458
Query: 390 QKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDR 449
++E Y HSEKLAL Y ++ + PG IRI KN+R+C DCH K VS++ NR I++RDR
Sbjct: 459 KEENLNY-HSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDR 517
Query: 450 NRFHCFKDGACTCKDYW 466
RFH F+DG C+C+DYW
Sbjct: 518 IRFHRFEDGLCSCRDYW 534
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 350 bits (898), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 177/441 (40%), Positives = 259/441 (58%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D++ N +I G VG + +FSSM + +W +VI + G L+V ++M
Sbjct: 442 DLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMR 501
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
K P+ T + L CA L GK +H G+ + + NALI+MY KCGCLE
Sbjct: 502 KSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLE 561
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
RVFE M R VV+W+ MI + M+ M + G+ P+ V FI +++ACS
Sbjct: 562 NSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACS 621
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
H GLVD+G A M+ Y I P +EHY C+VDLLSR+ ++ +A E I M + P+ +W
Sbjct: 622 HSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIW 681
Query: 266 GALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSR 325
++L CR ++ AE R + +L+ + GY ++ SN YA KW++VS IR+ +K +
Sbjct: 682 ASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDK 741
Query: 326 GVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDL 385
+ K PG S I + VH F +GD++ PQ++ I++ E L M +GYIPD V +L
Sbjct: 742 HITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNL 801
Query: 386 EDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIV 445
E+ ++K + HSE+LA+ +GL+NT+PG +++MKNLRVC DCH KL+S+I REI+
Sbjct: 802 EEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREIL 861
Query: 446 VRDRNRFHCFKDGACTCKDYW 466
VRD NRFH FKDG C+CKD W
Sbjct: 862 VRDANRFHLFKDGTCSCKDRW 882
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 130/277 (46%), Gaps = 3/277 (1%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
NI+I G + ARD+F+SM ++ SW S+I G + G EA+K+F M +
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
+ +T + ++ +L DL+FGK +H +G ++ V NALIDMY KCG + + ++
Sbjct: 406 ADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKI 465
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
F M V+W+++I M + + P+ TF+ L C+ +
Sbjct: 466 FSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAK 525
Query: 211 DKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
G+ + + R +G ++ L+++ S+ G LE + V MS + V W ++
Sbjct: 526 RLGKEIHCCLLR-FGYESELQIGNALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIY 583
Query: 271 GCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYA 307
++ A E + K ++ D V ++ +YA
Sbjct: 584 AYGMYGEGEKALETFADMEKSGIVPDS-VVFIAIIYA 619
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 121/251 (48%), Gaps = 3/251 (1%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR +F M R+ S+ ++I G K M EE++++F E D KP+ +TV +VL AC
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGH 319
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
L DL K ++ + GF+ V N LID+Y KCG + VF M + VSW+S+
Sbjct: 320 LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSI 379
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
I G+ M+ + + +++T++ ++ + + + G+ L + + G
Sbjct: 380 ISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKS-G 438
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
I + L+D+ ++ G + ++ ++ ++M + V W ++ C + +
Sbjct: 439 ICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNTVISACVRFGDFATGLQVT 497
Query: 286 RHLSKLDLLND 296
+ K +++ D
Sbjct: 498 TQMRKSEVVPD 508
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 135/282 (47%), Gaps = 13/282 (4%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ D+ N ++ +G + AR +F MP R++ SW S+I G + G EEAL+++ E
Sbjct: 138 ESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHE 197
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
++ P+ TV +VL A L ++ G+ +H FA +G V V N L+ MY+K
Sbjct: 198 LKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRR 257
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
+ RVF+ M R VS+++MI G+ + KP+ +T VL A
Sbjct: 258 PTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRA 316
Query: 204 CSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRV 263
C H+ + + + M + G V L+D+ ++ G + AR+V +M + V
Sbjct: 317 CGHLRDLSLAKYIYNYMLK-AGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC-KDTV 374
Query: 264 VWGALLGG----------CRLHKNIVLAEEAMRHLSKLDLLN 295
W +++ G +L K +++ EE H++ L L++
Sbjct: 375 SWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLIS 416
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%)
Query: 54 PQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGK 113
P +NV W S+I +K G+ EAL+ + ++ + P++ T +V+ ACA L D E G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 114 SVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHX 173
V+ GF +++V NAL+DMY + G L +VF+ M R +VSW+S+I G++ H
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 174 XXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL 216
+ + P+ T VL A ++ +V +G+ L
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGL 229
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ ++ N +I G + + +F M +R+V +WT +IY G E+AL+ F++
Sbjct: 541 ESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFAD 600
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFG 112
MEK G P+ V +A++ AC+ G ++ G
Sbjct: 601 MEKSGIVPDSVVFIAIIYACSHSGLVDEG 629
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 349 bits (896), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 180/429 (41%), Positives = 258/429 (60%), Gaps = 3/429 (0%)
Query: 40 VGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAV 99
G + AR++F +P+R+V S T++I G A+ G+ EEAL++F + +G PN VT ++
Sbjct: 201 AGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASL 260
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
L A + L L+ GK H + N+LIDMY KCG L R+F+ M ERT
Sbjct: 261 LTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTA 320
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXM-IRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT 218
+SW++M+VG++ H M +KP+ VT + VL CSH + D G +
Sbjct: 321 ISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFD 380
Query: 219 IM-RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKN 277
M +YG PG EHYGC+VD+L RAGR++EA E I M P V G+LLG CR+H +
Sbjct: 381 GMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLS 440
Query: 278 IVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSIT 337
+ + E R L +++ N G YV++SN+YA AG+W +V+ +R +M + V K PG S I
Sbjct: 441 VDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQ 500
Query: 338 IDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYR 397
+ +H F A D THP+ + + +++ +KMK GY+PD S VL D+ D +QKE L
Sbjct: 501 HEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDV-DEEQKEKMLLG 559
Query: 398 HSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKD 457
HSEKLAL +GLI T G+ IR+ KNLR+C DCH K+ S++ RE+ +RD+NRFH D
Sbjct: 560 HSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVD 619
Query: 458 GACTCKDYW 466
G C+C DYW
Sbjct: 620 GICSCGDYW 628
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 125/233 (53%), Gaps = 8/233 (3%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR + MP++NV SWT++I ++ G EAL VF+EM + KPNE T VL +C +
Sbjct: 106 ARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIR 165
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
L GK +H + +++V ++L+DMY K G ++E +FE + ER VVS +++
Sbjct: 166 ASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAI 225
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGR-ALLTIMRRDY 224
I G+A + GM PNYVT+ +L A S + L+D G+ A ++RR+
Sbjct: 226 IAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRREL 285
Query: 225 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR--VVWGALLGGCRLH 275
+++ L+D+ S+ G L AR + NM P R + W A+L G H
Sbjct: 286 PFYAVLQN--SLIDMYSKCGNLSYARRLFDNM---PERTAISWNAMLVGYSKH 333
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 110/247 (44%), Gaps = 18/247 (7%)
Query: 50 FSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDL 109
FSS P V I L G +EAL EM G + A+L AC L
Sbjct: 12 FSSSPTNYVLQTILPISQLCSNGRLQEALL---EMAMLGPEMGFHGYDALLNACLDKRAL 68
Query: 110 EFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGF 169
G+ VH +L Y+ L+ Y KC CLE+ +V + M E+ VVSW++MI +
Sbjct: 69 RDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRY 128
Query: 170 AMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHAC---SHVGLVDKGRALLTIMRRDYGI 226
+ M+R KPN TF VL +C S +GL + L+ D I
Sbjct: 129 SQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHI 188
Query: 227 VPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR--VVWGALLGGCRLHKNIVLAEEA 284
G L+D+ ++AG+++EARE+ + P R V A++ G + + L EEA
Sbjct: 189 FVG----SSLLDMYAKAGQIKEAREIFECL---PERDVVSCTAIIAG---YAQLGLDEEA 238
Query: 285 MRHLSKL 291
+ +L
Sbjct: 239 LEMFHRL 245
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 5/87 (5%)
Query: 24 QRDIATWNIMIAHLINV----GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALK 79
+R++ + ++ LI++ G + AR LF +MP+R SW +++ G +K G+ E L+
Sbjct: 282 RRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLE 341
Query: 80 VFSEMEKDGS-KPNEVTVVAVLVACAQ 105
+F M + KP+ VT++AVL C+
Sbjct: 342 LFRLMRDEKRVKPDAVTLLAVLSGCSH 368
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 347 bits (891), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 176/465 (37%), Positives = 259/465 (55%), Gaps = 32/465 (6%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ LY+ CG+ + L F++ D WN +++
Sbjct: 632 LVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVS-------------------------- 665
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
G + G EEAL+VF M ++G N T + + A ++ +++ GK VH
Sbjct: 666 -----GFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITK 720
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
G+ VCNALI MY KCG + + + F + + VSW+++I ++ H
Sbjct: 721 TGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDS 780
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
MI ++PN+VT +GVL ACSH+GLVDKG A M +YG+ P EHY C+VD+L+
Sbjct: 781 FDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLT 840
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RAG L A+E I M + P+ +VW LL C +HKN+ + E A HL +L+ + YV+
Sbjct: 841 RAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVL 900
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
+SN+YA + KW+ R+ MK +GVKK PG S I + +H F GD+ HP A I E
Sbjct: 901 LSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEY 960
Query: 362 WEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMK 421
++ L + GY+ D +L +L+ +QK+ ++ HSEKLA+ +GL++ + I +MK
Sbjct: 961 FQDLTKRASEIGYVQDCFSLLNELQH-EQKDPIIFIHSEKLAISFGLLSLPATVPINVMK 1019
Query: 422 NLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
NLRVC DCHA K VS++ NREI+VRD RFH F+ GAC+CKDYW
Sbjct: 1020 NLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 128/249 (51%), Gaps = 8/249 (3%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D N +++ ++G + +A +FS+M QR+ ++ ++I GL++CG E+A+++F M
Sbjct: 322 DTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH 381
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
DG +P+ T+ +++VAC+ G L G+ +H + GF N + AL+++Y KC +E
Sbjct: 382 LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIE 441
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
F VV W+ M+V + + M + PN T+ +L C
Sbjct: 442 TALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCI 501
Query: 206 HVGLVDKGRALLT-IMRRDYGIVPGVEHYGC--LVDLLSRAGRLEEAREVIANMSVPPNR 262
+G ++ G + + I++ ++ + Y C L+D+ ++ G+L+ A +++ + +
Sbjct: 502 RLGDLELGEQIHSQIIKTNFQL----NAYVCSVLIDMYAKLGKLDTAWDILIRFA-GKDV 556
Query: 263 VVWGALLGG 271
V W ++ G
Sbjct: 557 VSWTTMIAG 565
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 127/291 (43%), Gaps = 36/291 (12%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL+LYA C + A F + ++ WN+M+ V Y G DL RN
Sbjct: 430 LLNLYAKCADIETALDYFLETEVENVVLWNVML-----VAY-GLLDDL------RN---- 473
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+ ++F +M+ + PN+ T ++L C +LGDLE G+ +H
Sbjct: 474 ---------------SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 518
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
F N YVC+ LIDMY K G L+ + + + VVSW++MI G+ +
Sbjct: 519 TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTT 578
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M+ G++ + V + AC+ + + +G+ + G + LV L S
Sbjct: 579 FRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDLPFQNALVTLYS 637
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLD 292
R G++EE+ N + W AL+ G + N EEA+R +++
Sbjct: 638 RCGKIEESYLAFEQTEAGDN-IAWNALVSGFQQSGN---NEEALRVFVRMN 684
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 121/259 (46%), Gaps = 3/259 (1%)
Query: 11 ETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAK 70
E HAR+++ + + N +I G+V AR +F + ++ SW ++I GL+K
Sbjct: 207 EQIHARILYQGLRDSTVVC-NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSK 265
Query: 71 CGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYV 130
EA+++F +M G P +VL AC ++ LE G+ +H GF + YV
Sbjct: 266 NECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 325
Query: 131 CNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGM 190
CNAL+ +Y G L +F M +R V+++++I G + M G+
Sbjct: 326 CNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGL 385
Query: 191 KPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAR 250
+P+ T ++ ACS G + +G+ L + G + G L++L ++ +E A
Sbjct: 386 EPDSNTLASLVVACSADGTLFRGQQLHAYTTK-LGFASNNKIEGALLNLYAKCADIETAL 444
Query: 251 EVIANMSVPPNRVVWGALL 269
+ V N V+W +L
Sbjct: 445 DYFLETEV-ENVVLWNVML 462
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 123/266 (46%), Gaps = 3/266 (1%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
GE H++++ Q + +++I +G + A D+ ++V SWT++I G
Sbjct: 509 GEQIHSQIIKTNF-QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
+ ++AL F +M G + +EV + + ACA L L+ G+ +H A +GF ++
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 627
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
NAL+ +Y +CG +EE Y FE ++W++++ GF M R G
Sbjct: 628 FQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREG 687
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
+ N TF + A S + +G+ + ++ + G E L+ + ++ G + +A
Sbjct: 688 IDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDA 746
Query: 250 REVIANMSVPPNRVVWGALLGGCRLH 275
+ +S N V W A++ H
Sbjct: 747 EKQFLEVST-KNEVSWNAIINAYSKH 771
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 109/272 (40%), Gaps = 36/272 (13%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L Y G+ A +FD+MP+R I TWN MI L + +G LF M NV
Sbjct: 126 LFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENV--- 182
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG--KSVHRFA 119
PNE T VL AC + G + F + +H
Sbjct: 183 ----------------------------TPNEGTFSGVLEAC-RGGSVAFDVVEQIHARI 213
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
G + VCN LID+Y + G ++ RVF+G+R + SW +MI G + +
Sbjct: 214 LYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAI 273
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M +G+ P F VL AC + ++ G L ++ + G LV L
Sbjct: 274 RLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK-LGFSSDTYVCNALVSL 332
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
G L A + +NMS + V + L+ G
Sbjct: 333 YFHLGNLISAEHIFSNMS-QRDAVTYNTLING 363
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 79 KVFSEMEKDGSKPNEVTVVAVLVACAQL-GDLEFGKSVHRFAKGNGFLRNVYVCNALIDM 137
K +E G +PN T+ +L C + G L+ G+ +H G N + L D
Sbjct: 70 KRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDF 129
Query: 138 YVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTF 197
Y+ G L ++VF+ M ERT+ +W+ MI A M+ + PN TF
Sbjct: 130 YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF 189
Query: 198 IGVLHACS----HVGLVDKGRA-LLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV 252
GVL AC +V++ A +L RD +V L+DL SR G ++ AR V
Sbjct: 190 SGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNP-----LIDLYSRNGFVDLARRV 244
Query: 253 IANMSVPPNRVVWGALLGGCRLHKNIVLAE 282
+ + + W A++ G L KN AE
Sbjct: 245 FDGLRL-KDHSSWVAMISG--LSKNECEAE 271
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 345 bits (885), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 180/435 (41%), Positives = 259/435 (59%), Gaps = 4/435 (0%)
Query: 33 MIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPN 92
+I N +G +R +F V WT+++ G + E+AL +FS M ++ PN
Sbjct: 266 LITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPN 325
Query: 93 EVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE 152
+ T + L +C+ LG L++GK +H A G + +V N+L+ MY G + + VF
Sbjct: 326 QSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFI 385
Query: 153 GMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDK 212
+ ++++VSW+S+IVG A H MIR+ +P+ +TF G+L ACSH G ++K
Sbjct: 386 KIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEK 445
Query: 213 GRALLTIMRRDYG-IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
GR L M I ++HY C+VD+L R G+L+EA E+I M V PN +VW ALL
Sbjct: 446 GRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSA 505
Query: 272 CRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTP 331
CR+H ++ E+A + LD + YV++SN+YA AG+W VS++R MK G+ K P
Sbjct: 506 CRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKP 565
Query: 332 GCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQK 391
G S + I G HEF +GD+ P I+E E L K+K GY PD L D+ED +QK
Sbjct: 566 GSSWVVIRGKKHEFFSGDQ--PHCSRIYEKLEFLREKLKELGYAPDYRSALHDVED-EQK 622
Query: 392 EIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNR 451
E L+ HSE+LA+ +GLINT G ++ +MKNLRVCEDCH KL+S + REIV+RD R
Sbjct: 623 EEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIR 682
Query: 452 FHCFKDGACTCKDYW 466
FH FK+G C+C DYW
Sbjct: 683 FHHFKNGTCSCGDYW 697
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 122/266 (45%), Gaps = 2/266 (0%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G+ A +F +MP +D A WN M+ + G V A LF MP +NV SWT++I GL
Sbjct: 142 GKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLD 201
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
+ EAL +F M + K V+ ACA G VH GFL Y
Sbjct: 202 QNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEY 261
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
V +LI Y C + + +VF+ V W++++ G++++ M+R
Sbjct: 262 VSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNS 321
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
+ PN TF L++CS +G +D G+ + + + G+ LV + S +G + +A
Sbjct: 322 ILPNQSTFASGLNSCSALGTLDWGKEMHGVAVK-LGLETDAFVGNSLVVMYSDSGNVNDA 380
Query: 250 REVIANMSVPPNRVVWGALLGGCRLH 275
V + + V W +++ GC H
Sbjct: 381 VSVFIKI-FKKSIVSWNSIIVGCAQH 405
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 119/272 (43%), Gaps = 46/272 (16%)
Query: 10 GETRHARL-----MFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSV 64
G TR RL +FD+MP RD+ +WN MI+ + G + A LF MP+R+V SWT++
Sbjct: 75 GYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAM 134
Query: 65 IYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGF 124
+ G + G ++A ++F +M
Sbjct: 135 VNGCFRSGKVDQAERLFYQMP--------------------------------------- 155
Query: 125 LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXX 184
+++ N+++ Y++ G +++ ++F+ M + V+SW++MI G +
Sbjct: 156 VKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKN 215
Query: 185 MIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAG 244
M+R +K F V+ AC++ G + ++ + G + L+ +
Sbjct: 216 MLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIK-LGFLYEEYVSASLITFYANCK 274
Query: 245 RLEEAREVIANMSVPPNRVVWGALLGGCRLHK 276
R+ ++R+V + V VW ALL G L+K
Sbjct: 275 RIGDSRKVF-DEKVHEQVAVWTALLSGYSLNK 305
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 98/236 (41%), Gaps = 40/236 (16%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ D N ++ + G V A +F + ++++ SW S+I G A+ G + A +F +
Sbjct: 358 ETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQ 417
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG--NGFLRNVYVCNALIDMYVKC 141
M + +P+E+T +L AC+ G LE G+ + + N R + ++D+ +C
Sbjct: 418 MIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRC 477
Query: 142 GCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVL 201
G L+E E + ER VV KPN + ++ +L
Sbjct: 478 GKLKEA----EELIERMVV------------------------------KPNEMVWLALL 503
Query: 202 HACSHVGLVDKG-RALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM 256
AC VD+G +A I D Y L ++ + AGR ++ M
Sbjct: 504 SACRMHSDVDRGEKAAAAIFNLD---SKSSAAYVLLSNIYASAGRWSNVSKLRVKM 556
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 343 bits (879), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 172/436 (39%), Positives = 257/436 (58%), Gaps = 1/436 (0%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N +I G + +++DLF+ + RN+ +W +++ A G EE LK+ S+M G
Sbjct: 503 NSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVS 562
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
++ + L A A+L LE G+ +H A GF + ++ NA DMY KCG + E ++
Sbjct: 563 LDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKM 622
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
R++ SW+ +I H M+ +G+KP +VTF+ +L ACSH GLV
Sbjct: 623 LPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLV 682
Query: 211 DKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
DKG A ++ RD+G+ P +EH C++DLL R+GRL EA I+ M + PN +VW +LL
Sbjct: 683 DKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLA 742
Query: 271 GCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKT 330
C++H N+ +A +LSKL+ +D YV+ SN++A G+WE+V +R+ M + +KK
Sbjct: 743 SCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKK 802
Query: 331 PGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQ 390
CS + + V F GD THPQ I+ E + +K GY+ DTS L D D +Q
Sbjct: 803 QACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQD-TDEEQ 861
Query: 391 KEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRN 450
KE L+ HSE+LAL Y L++T G ++RI KNLR+C DCH+ +K VS + R IV+RD+
Sbjct: 862 KEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQY 921
Query: 451 RFHCFKDGACTCKDYW 466
RFH F+ G C+CKDYW
Sbjct: 922 RFHHFERGLCSCKDYW 937
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 116/253 (45%), Gaps = 12/253 (4%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ +A N +I+ L ++G V A +F M +R+ SW S+ A+ G EE+ ++FS
Sbjct: 192 ESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSL 251
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M + + N TV +L + ++G+ +H GF V VCN L+ MY G
Sbjct: 252 MRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGR 311
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
E VF+ M + ++SW+S++ F MI G NYVTF L A
Sbjct: 312 SVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAA 371
Query: 204 CSHVGLVDKGR---ALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPP 260
C +KGR L+ + Y + G LV + + G + E+R V+ M P
Sbjct: 372 CFTPDFFEKGRILHGLVVVSGLFYNQIIG----NALVSMYGKIGEMSESRRVLLQM---P 424
Query: 261 NR--VVWGALLGG 271
R V W AL+GG
Sbjct: 425 RRDVVAWNALIGG 437
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 121/246 (49%), Gaps = 13/246 (5%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N +++ +G + +R + MP+R+V +W ++I G A+ ++AL F M +G
Sbjct: 401 NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVS 460
Query: 91 PNEVTVVAVLVACAQLGDL-EFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYR 149
N +TVV+VL AC GDL E GK +H + GF + +V N+LI MY KCG L
Sbjct: 461 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 520
Query: 150 VFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGL 209
+F G+ R +++W++M+ A H M G+ + +F L A + + +
Sbjct: 521 LFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 580
Query: 210 VDKGRALLTIMRRDYGIVPGVEH----YGCLVDLLSRAGRLEEAREVIA---NMSVPPNR 262
+++G+ L + G EH + D+ S+ G + E +++ N S+P
Sbjct: 581 LEEGQQL-----HGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWN 635
Query: 263 VVWGAL 268
++ AL
Sbjct: 636 ILISAL 641
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 116/260 (44%), Gaps = 19/260 (7%)
Query: 42 YVGAARDL-----FSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTV 96
Y GA R + F MP +++ SW S++ G +AL + M G N VT
Sbjct: 306 YAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTF 365
Query: 97 VAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRE 156
+ L AC E G+ +H +G N + NAL+ MY K G + E RV M
Sbjct: 366 TSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPR 425
Query: 157 RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVG-LVDKGRA 215
R VV+W+++I G+A M G+ NY+T + VL AC G L+++G+
Sbjct: 426 RDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKP 485
Query: 216 LLTIMRRDYGIVPGVEH----YGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
L Y + G E L+ + ++ G L ++++ + N + W A+L
Sbjct: 486 L-----HAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAA 539
Query: 272 CRLHKNIVLAEEAMRHLSKL 291
H + EE ++ +SK+
Sbjct: 540 NAHHGH---GEEVLKLVSKM 556
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 122/257 (47%), Gaps = 6/257 (2%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G V AR LF MP RN SW +++ G+ + G+ E ++ F +M G KP+ + +++
Sbjct: 6 GRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLV 65
Query: 101 VACAQLGDL-EFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
AC + G + G VH F +G L +VYV A++ +Y G + +VFE M +R V
Sbjct: 66 TACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNV 125
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
VSW+S++VG++ M G+ N + V+ +C + GR ++
Sbjct: 126 VSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQ 185
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIV 279
+ + G+ + L+ +L G ++ A + MS + + W ++ + +I
Sbjct: 186 VVKS-GLESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQNGHI- 242
Query: 280 LAEEAMRHLSKLDLLND 296
EE+ R S + +D
Sbjct: 243 --EESFRIFSLMRRFHD 257
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 108/244 (44%), Gaps = 15/244 (6%)
Query: 34 IAHLINV-GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPN 92
I HL V G V +R +F MP RNV SWTS++ G + G EE + ++ M +G N
Sbjct: 100 ILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCN 159
Query: 93 EVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE 152
E ++ V+ +C L D G+ + +G + V N+LI M G ++ +F+
Sbjct: 160 ENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFD 219
Query: 153 GMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDK 212
M ER +SW+S+ +A + M R + N T +L HV
Sbjct: 220 QMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKW 279
Query: 213 GRALLTIMRRDYGIVP--GVEHYGCLVDLLSR----AGRLEEAREVIANMSVPPNRVVWG 266
GR + +G+V G + C+ + L R AGR EA V M + + W
Sbjct: 280 GRGI-------HGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT-KDLISWN 331
Query: 267 ALLG 270
+L+
Sbjct: 332 SLMA 335
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 340 bits (873), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 176/466 (37%), Positives = 268/466 (57%), Gaps = 1/466 (0%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS 60
+L++ Y + A +F MP+R+ +W+ +I ++ G + A+ LF MP++NV S
Sbjct: 201 VLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVS 260
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
WT++I G ++ G E A+ + EM + G KPNE T+ AVL AC++ G L G +H +
Sbjct: 261 WTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYIL 320
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
NG + + AL+DMY KCG L+ VF M + ++SW++MI G+A+H
Sbjct: 321 DNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQ 380
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M+ G KP+ V F+ VL AC + VD G MR DY I P ++HY +VDLL
Sbjct: 381 CFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLL 440
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYV 300
RAG+L EA E++ NM + P+ W AL C+ HK AE ++L +LD G Y+
Sbjct: 441 GRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYI 500
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFE 360
+ +A G ++V + R ++ R +++ G S I +DG +++F AGD +H + I
Sbjct: 501 FLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGL 560
Query: 361 MWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIM 420
++++ KGY P + D+E+ ++KE HSEKLAL G + T PG +IRI+
Sbjct: 561 KLDEIISLAIQKGYNPGADWSIHDIEE-EEKENVTGIHSEKLALTLGFLRTAPGTTIRII 619
Query: 421 KNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
KNLR+C DCH+ K VS+I R+I++RD +FH FKDG C+C DYW
Sbjct: 620 KNLRICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 139/357 (38%), Gaps = 73/357 (20%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARD----LFSSMPQRN 57
+ L +C +T R + ++ +R + + + A L++ + + D +F + +RN
Sbjct: 32 FISLIHACKDTASLRHVHAQILRRGVLSSRVA-AQLVSCSSLLKSPDYSLSIFRNSEERN 90
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
++I GL + E +++ F M + G KP+ +T VL + ++LG G+++H
Sbjct: 91 PFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHA 150
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE------------------------- 152
N + +V +L+DMY K G L+ ++VFE
Sbjct: 151 ATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAK 210
Query: 153 ----------GMRERTVVSWSSMIV-------------------------------GFAM 171
M ER SWS++I GF+
Sbjct: 211 DMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQ 270
Query: 172 HXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVE 231
M+ G+KPN T VL ACS G + G + + D GI
Sbjct: 271 TGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYI-LDNGIKLDRA 329
Query: 232 HYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHL 288
LVD+ ++ G L+ A V +NM+ + + W A++ G +H A + R +
Sbjct: 330 IGTALVDMYAKCGELDCAATVFSNMN-HKDILSWTAMIQGWAVHGRFHQAIQCFRQM 385
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 121/298 (40%), Gaps = 34/298 (11%)
Query: 79 KVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMY 138
K++ ++ S P+E ++++ AC L + VH LR + + +
Sbjct: 16 KIYFPADRQAS-PDESHFISLIHACKDTASL---RHVHA-----QILRRGVLSSRVAAQL 66
Query: 139 VKCGCL----EEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNY 194
V C L + +F ER +++I G + M+R+G+KP+
Sbjct: 67 VSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDR 126
Query: 195 VTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIA 254
+TF VL + S +G GRAL +++ LVD+ ++ G+L+ A +V
Sbjct: 127 LTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLS-LVDMYAKTGQLKHAFQVFE 185
Query: 255 NMSVPPNRV------VWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAE 308
P+R+ +W L+ G K++ +A R + + N G + + Y +
Sbjct: 186 E---SPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPE---RNSGSWSTLIKGYVD 239
Query: 309 AGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLL 366
+G+ ++ LM + V ++ +++ F + FEM EK L
Sbjct: 240 SGELNRAKQLFELMPEKNV--------VSWTTLINGFSQTGDYETAISTYFEMLEKGL 289
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 340 bits (871), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 170/429 (39%), Positives = 258/429 (60%), Gaps = 1/429 (0%)
Query: 38 INVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVV 97
+ G + AA+ F S+P + +WT++I G + G E A VFS+M G P+E T+
Sbjct: 563 VKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIA 622
Query: 98 AVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER 157
+ A + L LE G+ +H A + +V +L+DMY KCG +++ Y +F+ +
Sbjct: 623 TLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMM 682
Query: 158 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL 217
+ +W++M+VG A H M +G+KP+ VTFIGVL ACSH GLV + +
Sbjct: 683 NITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHM 742
Query: 218 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKN 277
M DYGI P +EHY CL D L RAG +++A +I +MS+ + ++ LL CR+ +
Sbjct: 743 RSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGD 802
Query: 278 IVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSIT 337
+ L +L+ L+ YV++SN+YA A KW+E+ R +MK VKK PG S I
Sbjct: 803 TETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIE 862
Query: 338 IDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYR 397
+ +H FV D ++ Q + I+ + ++ +K +GY+P+T L+D+E+ ++KE LY
Sbjct: 863 VKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEE-EEKERALYY 921
Query: 398 HSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKD 457
HSEKLA+ +GL++T P IR++KNLRVC DCH A K ++++ NREIV+RD NRFH FKD
Sbjct: 922 HSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKD 981
Query: 458 GACTCKDYW 466
G C+C DYW
Sbjct: 982 GICSCGDYW 990
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 116/235 (49%), Gaps = 14/235 (5%)
Query: 44 GAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVAC 103
G AR +F +M +R++ SW SVI G+A+ G+ EA+ +F ++ + G KP++ T+ +VL A
Sbjct: 367 GFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAA 426
Query: 104 AQLGD-LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
+ L + L K VH A + + +V ALID Y + C++E +FE +V+W
Sbjct: 427 SSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFE-RHNFDLVAW 485
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR 222
++M+ G+ M + G + + T V C + +++G+ +
Sbjct: 486 NAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQV-----H 540
Query: 223 DYGIVPGVEH----YGCLVDLLSRAGRLEEAREVIANMSVP-PNRVVWGALLGGC 272
Y I G + ++D+ + G + A+ A S+P P+ V W ++ GC
Sbjct: 541 AYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQ--FAFDSIPVPDDVAWTTMISGC 593
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 110/244 (45%), Gaps = 38/244 (15%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSM------PQ 55
L+++Y G+ + +++F++MP RD+ WN+M+ + +G+ A DL S+ P
Sbjct: 186 LVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPN 245
Query: 56 R--------------------------NVRSWTSVIY---GLAK---CGMCEEALKVFSE 83
+ S + +I+ GL++ G LK F++
Sbjct: 246 EITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFAD 305
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M + + ++VT + +L ++ L G+ VH A G + V N+LI+MY K
Sbjct: 306 MVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRK 365
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
VF+ M ER ++SW+S+I G A + ++R G+KP+ T VL A
Sbjct: 366 FGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA 425
Query: 204 CSHV 207
S +
Sbjct: 426 ASSL 429
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 104/217 (47%), Gaps = 4/217 (1%)
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
+W +++ G + + LK+F+ M K G + ++ T+ V C L + GK VH +A
Sbjct: 484 AWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYA 543
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
+G+ +++V + ++DMYVKCG + F+ + V+W++MI G +
Sbjct: 544 IKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAF 603
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL-LTIMRRDYGIVPGVEHYGCLVD 238
M +G+ P+ T + A S + +++GR + ++ + P V LVD
Sbjct: 604 HVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG--TSLVD 661
Query: 239 LLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
+ ++ G +++A + + + N W A+L G H
Sbjct: 662 MYAKCGSIDDAYCLFKRIEM-MNITAWNAMLVGLAQH 697
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 94/194 (48%), Gaps = 8/194 (4%)
Query: 10 GETRHARLM-FDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGL 68
G+ HAR++ F++ P+R + N +I+ G + AR +F MP R++ SW S++
Sbjct: 58 GKCTHARILTFEENPERFLI--NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAY 115
Query: 69 AKCGMC-----EEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNG 123
A+ C ++A +F + +D + +T+ +L C G + +S H +A G
Sbjct: 116 AQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIG 175
Query: 124 FLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXX 183
+ +V AL+++Y+K G ++EG +FE M R VV W+ M+ +
Sbjct: 176 LDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSS 235
Query: 184 XMIRVGMKPNYVTF 197
G+ PN +T
Sbjct: 236 AFHSSGLNPNEITL 249
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 340 bits (871), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 175/378 (46%), Positives = 238/378 (62%), Gaps = 1/378 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++ +Y+ G + ARL+FD M ++ TWN MI + G V A +F MP+R++ SW
Sbjct: 115 IIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISW 174
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
T++I G K G EEAL F EM+ G KP+ V ++A L AC LG L FG VHR+
Sbjct: 175 TAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLS 234
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
F NV V N+LID+Y +CGC+E +VF M +RTVVSW+S+IVGFA +
Sbjct: 235 QDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVY 294
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M G KP+ VTF G L ACSHVGLV++G IM+ DY I P +EHYGCLVDL S
Sbjct: 295 FRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYS 354
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH-KNIVLAEEAMRHLSKLDLLNDGYYV 300
RAGRLE+A +++ +M + PN VV G+LL C H NIVLAE M+HL+ L++ + YV
Sbjct: 355 RAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYV 414
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFE 360
++SN+YA GKWE S++RR MK G+KK PG SSI ID +H F+AGD H + I E
Sbjct: 415 ILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIRE 474
Query: 361 MWEKLLVKMKMKGYIPDT 378
+ E + ++++G + +T
Sbjct: 475 VLELISSDLRLQGCVVET 492
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 119/267 (44%), Gaps = 41/267 (15%)
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ-------LGDLEFG 112
SWTS I L + G EA K FS+M G +PN +T +A+L C LGDL G
Sbjct: 38 SWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHG 97
Query: 113 KSVH----------------------RFAKGNGFL-----RNVYVCNALIDMYVKCGCLE 145
+ RF K +N N +ID Y++ G ++
Sbjct: 98 YACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVD 157
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
++F+ M ER ++SW++MI GF M G+KP+YV I L+AC+
Sbjct: 158 NAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACT 217
Query: 206 HVGLVDKGRAL-LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV 264
++G + G + ++ +D+ V L+DL R G +E AR+V NM V
Sbjct: 218 NLGALSFGLWVHRYVLSQDFK--NNVRVSNSLIDLYCRCGCVEFARQVFYNME-KRTVVS 274
Query: 265 WGALLGGCRLHKNIVLAEEAMRHLSKL 291
W +++ G + N A E++ + K+
Sbjct: 275 WNSVIVGFAANGN---AHESLVYFRKM 298
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 72/176 (40%), Gaps = 12/176 (6%)
Query: 158 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL 217
T VSW+S I + M G++PN++TFI +L C G G L
Sbjct: 35 TTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGC---GDFTSGSEAL 91
Query: 218 TIMRRDYGIVPGVEHY-----GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGC 272
+ Y G++ ++ + S+ GR ++AR V M N V W ++ G
Sbjct: 92 GDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYME-DKNSVTWNTMIDGY 150
Query: 273 RLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVK 328
+ A + + + DL++ + M N + + G EE R M+ GVK
Sbjct: 151 MRSGQVDNAAKMFDKMPERDLIS---WTAMINGFVKKGYQEEALLWFREMQISGVK 203
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 338 bits (866), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 172/426 (40%), Positives = 252/426 (59%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G V A +F MP R++ SW +I + G+ +AL ++ M +G + T+VA+L
Sbjct: 156 GSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALL 215
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
+CA + L G +HR A V+V NALIDMY KCG LE VF GMR+R V+
Sbjct: 216 SSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVL 275
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
+W+SMI+G+ +H M+ G++PN +TF+G+L CSH GLV +G IM
Sbjct: 276 TWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIM 335
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
+ + P V+HYGC+VDL RAG+LE + E+I S + V+W LLG C++H+N+ L
Sbjct: 336 SSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLEL 395
Query: 281 AEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDG 340
E AM+ L +L+ N G YV+M+++Y+ A + + +R+L++S ++ PG S I I
Sbjct: 396 GEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGD 455
Query: 341 VVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSE 400
VH+FV D+ HP++ I+ +++ + + GY P+ S + HSE
Sbjct: 456 QVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPEDSNRTAPTLSDRCLGSADTSHSE 515
Query: 401 KLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGAC 460
KLA+ YGL+ T G ++RI KNLRVC DCH+ K VS+ NREI+VRDR RFH F DG C
Sbjct: 516 KLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGIC 575
Query: 461 TCKDYW 466
+C DYW
Sbjct: 576 SCNDYW 581
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 120/307 (39%), Gaps = 46/307 (14%)
Query: 48 DLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDG-SKPNEVTVVAVLVACAQL 106
D F S P + W +I G + ++ ++ M S+P+ T L +C ++
Sbjct: 63 DHFDSDP--STSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERI 120
Query: 107 GDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMI 166
+ +H +GFL + V +L+ Y G +E +VF+ M R +VSW+ MI
Sbjct: 121 KSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMI 180
Query: 167 VGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGI 226
F+ M G+ + T + +L +C+HV ++ G +L + D
Sbjct: 181 CCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMG-VMLHRIACDIRC 239
Query: 227 VPGVEHYGCLVDLLSRAGRLEEAREVIANM------------------------------ 256
V L+D+ ++ G LE A V M
Sbjct: 240 ESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRK 299
Query: 257 ----SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHL----SKLDLL-NDGYYVVMSNVYA 307
V PN + + LL GC H+ +V +E + H S+ L N +Y M ++Y
Sbjct: 300 MVASGVRPNAITFLGLLLGCS-HQGLV--KEGVEHFEIMSSQFHLTPNVKHYGCMVDLYG 356
Query: 308 EAGKWEE 314
AG+ E
Sbjct: 357 RAGQLEN 363
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 6/203 (2%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N +I G + A +F+ M +R+V +W S+I G G EA+ F +M G +
Sbjct: 247 NALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVR 306
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLR-NVYVCNALIDMYVKCGCLEEGYR 149
PN +T + +L+ C+ G ++ G L NV ++D+Y + G LE
Sbjct: 307 PNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLE 366
Query: 150 -VFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGM--KPNYVTFIGVLHACSH 206
++ V W +++ +H ++++ +YV + A +
Sbjct: 367 MIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAAND 426
Query: 207 VGLVDKGRALLTIMRRDYGIVPG 229
R L I D VPG
Sbjct: 427 AQAFASMRKL--IRSHDLQTVPG 447
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 337 bits (865), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 181/504 (35%), Positives = 271/504 (53%), Gaps = 40/504 (7%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHL------------------------ 37
L+ +Y G +AR++FD M ++I WN +++ L
Sbjct: 266 LIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPD 325
Query: 38 -----------INVGYVGAARDLFSSMPQR----NVRSWTSVIYGLAKCGMCEEALKVFS 82
+G A D+ M ++ NV SWT++ G +K G ALKVF
Sbjct: 326 AITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFI 385
Query: 83 EMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG 142
+M+++G PN T+ +L L L GK VH F + + YV AL+DMY K G
Sbjct: 386 KMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSG 445
Query: 143 CLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLH 202
L+ +F G++ +++ SW+ M++G+AM M+ GM+P+ +TF VL
Sbjct: 446 DLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLS 505
Query: 203 ACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR 262
C + GLV +G +MR YGI+P +EH C+VDLL R+G L+EA + I MS+ P+
Sbjct: 506 VCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDA 565
Query: 263 VVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLM 322
+WGA L C++H+++ LAE A + L L+ N Y++M N+Y+ +WE+V RIR LM
Sbjct: 566 TIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLM 625
Query: 323 KSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVL 382
++ V+ S I ID VH F A +THP I+ KL+ +MK GY+PDTS +
Sbjct: 626 RNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIH 685
Query: 383 LDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENR 442
D+ D+ +KE L H+EKLA+ YGLI K IR++KN +C D H K +S + NR
Sbjct: 686 QDISDS-EKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNR 744
Query: 443 EIVVRDRNRFHCFKDGACTCKDYW 466
EIV+++ R H F+DG C+C D W
Sbjct: 745 EIVLQEGARVHHFRDGKCSCNDSW 768
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 138/275 (50%), Gaps = 8/275 (2%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMP----QRN 57
L+ +Y+ G+ +R +F+ M R++++WN +++ +GYV A L M + +
Sbjct: 130 LIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPD 189
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
+ +W S++ G A G+ ++A+ V M+ G KP+ ++ ++L A A+ G L+ GK++H
Sbjct: 190 IVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHG 249
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
+ N +VYV LIDMY+K G L VF+ M + +V+W+S++ G +
Sbjct: 250 YILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKD 309
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
M + G+KP+ +T+ + + +G +K ++ M ++ G+ P V + +
Sbjct: 310 AEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKM-KEKGVAPNVVSWTAIF 368
Query: 238 DLLSRAGRLEEAREVIANMS---VPPNRVVWGALL 269
S+ G A +V M V PN LL
Sbjct: 369 SGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 156/375 (41%), Gaps = 50/375 (13%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
+G A LF MP+R+ +W ++ + G E+A+++F EM+ G+K + T+V +L
Sbjct: 39 LGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQV 98
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERT---- 158
C+ G+ +H + G NV +CN+LI MY + G LE +VF M++R
Sbjct: 99 CSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSW 158
Query: 159 -------------------------------VVSWSSMIVGFAMHXXXXXXXXXXXXMIR 187
+V+W+S++ G+A M
Sbjct: 159 NSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQI 218
Query: 188 VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLE 247
G+KP+ + +L A + G + G+A+ + R+ + V L+D+ + G L
Sbjct: 219 AGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQ-LWYDVYVETTLIDMYIKTGYLP 277
Query: 248 EAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG-YYVVMSNVY 306
AR V +M N V W +L+ G + AE M + K + D + +++ Y
Sbjct: 278 YARMVF-DMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGY 336
Query: 307 AEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLL 366
A GK E+ + MK +GV + G G F K+
Sbjct: 337 ATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGC------------SKNGNFRNALKVF 384
Query: 367 VKMKMKGYIPDTSVV 381
+KM+ +G P+ + +
Sbjct: 385 IKMQEEGVGPNAATM 399
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 337 bits (865), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 171/426 (40%), Positives = 252/426 (59%), Gaps = 1/426 (0%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + A +F SM ++ +W+S++ G + EEAL ++ ++ + N+ T+ +V+
Sbjct: 211 GMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVI 270
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
AC+ L L GK +H +GF NV+V ++ +DMY KCG L E Y +F ++E+ +
Sbjct: 271 CACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLE 330
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
W+++I GFA H M + GM PN VTF +L C H GLV++GR +M
Sbjct: 331 LWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLM 390
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
R YG+ P V HY C+VD+L RAG L EA E+I ++ P +WG+LL CR++KN+ L
Sbjct: 391 RTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLEL 450
Query: 281 AEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDG 340
AE A L +L+ N G +V++SN+YA +WEE+++ R+L++ VKK G S I I
Sbjct: 451 AEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKD 510
Query: 341 VVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSE 400
VH F G+ HP+ + I + L++K + GY P L D+E K++E+ L +HSE
Sbjct: 511 KVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEEL-LMQHSE 569
Query: 401 KLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGAC 460
KLALV+GL+ +RIMKNLR+C DCH K S R I+VRD NRFH F DG C
Sbjct: 570 KLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHC 629
Query: 461 TCKDYW 466
+C D+W
Sbjct: 630 SCGDFW 635
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 148/302 (49%), Gaps = 7/302 (2%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ N++I G+V AR +F M +R++ SW ++I + M EAL +F EM
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMR 154
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
+G K +E T+ +VL AC D K +H + N+YV AL+D+Y KCG ++
Sbjct: 155 NEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIK 214
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
+ +VFE M++++ V+WSSM+ G+ + R+ ++ N T V+ ACS
Sbjct: 215 DAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACS 274
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
++ + +G+ + ++ + G V VD+ ++ G L E+ + + + N +W
Sbjct: 275 NLAALIEGKQMHAVICKS-GFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQ-EKNLELW 332
Query: 266 GALLGGCRLH---KNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLM 322
++ G H K +++ E M+ N+ + + +V G EE R +LM
Sbjct: 333 NTIISGFAKHARPKEVMILFEKMQQDGMHP--NEVTFSSLLSVCGHTGLVEEGRRFFKLM 390
Query: 323 KS 324
++
Sbjct: 391 RT 392
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 335 bits (859), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 168/430 (39%), Positives = 264/430 (61%), Gaps = 6/430 (1%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + AR +F MP++++ +W S++ G + G+ +EA++VF +M + G +P+ T V++L
Sbjct: 156 GDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLL 215
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
ACAQ G + G VH++ G NV + ALI++Y +CG + + VF+ M+E V
Sbjct: 216 SACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVA 275
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXM-IRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
+W++MI + H M G PN VTF+ VL AC+H GLV++GR++
Sbjct: 276 AWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKR 335
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRV---VWGALLGGCRLHK 276
M + Y ++PGVEH+ C+VD+L RAG L+EA + I + +W A+LG C++H+
Sbjct: 336 MTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHR 395
Query: 277 NIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSI 336
N L E + L L+ N G++V++SN+YA +GK +EVS IR M ++K G S I
Sbjct: 396 NYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVI 455
Query: 337 TIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLY 396
++ + F GDE+H + I+ E L+ + K GY P + V+ +E+ ++KE L
Sbjct: 456 EVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVEE-EEKEFALR 514
Query: 397 RHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFK 456
HSEKLA+ +GL+ T ++I I+KNLR+CEDCH+AFK +S + NR+I VRD+ RFH F+
Sbjct: 515 YHSEKLAVAFGLLKT-VDVAITIVKNLRICEDCHSAFKYISIVSNRQITVRDKLRFHHFQ 573
Query: 457 DGACTCKDYW 466
+G+C+C DYW
Sbjct: 574 NGSCSCLDYW 583
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 137/289 (47%), Gaps = 11/289 (3%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGD 108
LF S+P + + SVI +K + + + M P+ T +V+ +CA L
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSA 122
Query: 109 LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVG 168
L GK VH A +GF + YV AL+ Y KCG +E +VF+ M E+++V+W+S++ G
Sbjct: 123 LRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSG 182
Query: 169 FAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVP 228
F + M G +P+ TF+ +L AC+ G V G + + + G+
Sbjct: 183 FEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISE-GLDL 241
Query: 229 GVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHL 288
V+ L++L SR G + +AREV M N W A++ H ++A+
Sbjct: 242 NVKLGTALINLYSRCGDVGKAREVFDKMK-ETNVAAWTAMISAYGTHG---YGQQAVELF 297
Query: 289 SKLD-----LLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPG 332
+K++ + N+ +V + + A AG EE + + M ++ + PG
Sbjct: 298 NKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRM-TKSYRLIPG 345
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSM-----PQR 56
L++LY+ CG+ AR +FDKM + ++A W MI+ GY A +LF+ M P
Sbjct: 249 LINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIP 308
Query: 57 NVRSWTSVIYGLAKCGMCEEALKVFSEMEKD 87
N ++ +V+ A G+ EE V+ M K
Sbjct: 309 NNVTFVAVLSACAHAGLVEEGRSVYKRMTKS 339
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 335 bits (858), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 175/438 (39%), Positives = 260/438 (59%), Gaps = 3/438 (0%)
Query: 31 NIMIAHL-INVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGS 89
N +AH+ + G + + SMP RN+ +W ++I G A+ G E L ++ M+ G
Sbjct: 129 NSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGC 188
Query: 90 KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYR 149
+PN++T V VL +C+ L G+ +H A G V V ++LI MY KCGCL + +
Sbjct: 189 RPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAK 248
Query: 150 VFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI-RVGMKPNYVTFIGVLHACSHVG 208
F + V WSSMI + H M + M+ N V F+ +L+ACSH G
Sbjct: 249 AFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSG 308
Query: 209 LVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGAL 268
L DKG L +M YG PG++HY C+VDLL RAG L++A +I +M + + V+W L
Sbjct: 309 LKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTL 368
Query: 269 LGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVK 328
L C +HKN +A+ + + ++D + YV+++NV+A A +W +VS +R+ M+ + VK
Sbjct: 369 LSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVK 428
Query: 329 KTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDA 388
K G S G VH+F GD + ++K I+ ++L ++MK+KGY PDT+ VL D+ D
Sbjct: 429 KEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDM-DE 487
Query: 389 KQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRD 448
++KE L +HSEKLA+ + L+ G IRI+KNLRVC DCH AFK +S I+NREI +RD
Sbjct: 488 EEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRD 547
Query: 449 RNRFHCFKDGACTCKDYW 466
+RFH F +G C+C DYW
Sbjct: 548 GSRFHHFINGKCSCGDYW 565
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 134/273 (49%), Gaps = 2/273 (0%)
Query: 3 LHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWT 62
+ +Y+ G+ A ++ +M +++ + NI+I + G + AR +F MP R + +W
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 63 SVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGN 122
++I GL + EE L +F EM G P+E T+ +V A L + G+ +H +
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 123 GFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXX 182
G ++ V ++L MY++ G L++G V M R +V+W+++I+G A +
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 183 XXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSR 242
M G +PN +TF+ VL +CS + + +G+ + + G V L+ + S+
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIK-IGASSVVAVVSSLISMYSK 239
Query: 243 AGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
G L +A + + + V+W +++ H
Sbjct: 240 CGCLGDAAKAFSERE-DEDEVMWSSMISAYGFH 271
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 334 bits (857), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 176/441 (39%), Positives = 259/441 (58%), Gaps = 2/441 (0%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ + ++ G + AR +F MPQRNV +W+ ++YG A+ G EEAL +F E
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
+ N+ + +V+ CA LE G+ +H + + F + +V ++L+ +Y KCG E
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
Y+VF + + + W++M+ +A H M GMKPN++TF+ VL+ACS
Sbjct: 270 GAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACS 329
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
H GLVD+GR M+ I P +HY LVD+L RAGRL+EA EVI NM + P VW
Sbjct: 330 HAGLVDEGRYYFDQMKESR-IEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVW 388
Query: 266 GALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSR 325
GALL C +HKN LA A + +L ++ G ++ +SN YA G++E+ ++ R+L++ R
Sbjct: 389 GALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDR 448
Query: 326 GVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDL 385
G KK G S + VH F AG+ H ++K I+E +L +M+ GYI DTS VL ++
Sbjct: 449 GEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREV 508
Query: 386 EDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIV 445
+ ++ + Y HSE+LA+ +GLI IR+MKNLRVC DCH A K +S R I+
Sbjct: 509 DGDEKNQTIRY-HSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVII 567
Query: 446 VRDRNRFHCFKDGACTCKDYW 466
VRD NRFH F+DG C+C DYW
Sbjct: 568 VRDNNRFHRFEDGKCSCNDYW 588
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 110/232 (47%), Gaps = 2/232 (0%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
+R F PQ++ +W+S+I A+ + +L+ +M +P++ + + +CA
Sbjct: 69 SRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAI 128
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
L + G+SVH + G+ +V+V ++L+DMY KCG + ++F+ M +R VV+WS M
Sbjct: 129 LSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGM 188
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
+ G+A + + N +F V+ C++ L++ GR + + +
Sbjct: 189 MYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSF 248
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKN 277
LV L S+ G E A +V + V N +W A+L H +
Sbjct: 249 DS-SSFVGSSLVSLYSKCGVPEGAYQVFNEVPV-KNLGIWNAMLKAYAQHSH 298
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 332 bits (850), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 177/443 (39%), Positives = 252/443 (56%), Gaps = 3/443 (0%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D++ N +I + ++ +F+ M +N SW S++ + E+A ++
Sbjct: 243 DVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSR 302
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
KD + ++ + +VL ACA + LE G+S+H A R ++V +AL+DMY KCGC+E
Sbjct: 303 KDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIE 362
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR--VGMKPNYVTFIGVLHA 203
+ + F+ M E+ +V+ +S+I G+A M G PNY+TF+ +L A
Sbjct: 363 DSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSA 422
Query: 204 CSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRV 263
CS G V+ G + MR YGI PG EHY C+VD+L RAG +E A E I M + P
Sbjct: 423 CSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTIS 482
Query: 264 VWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMK 323
VWGAL CR+H L A +L KLD + G +V++SN +A AG+W E + +R +K
Sbjct: 483 VWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELK 542
Query: 324 SRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLL 383
G+KK G S IT+ VH F A D +H K I KL +M+ GY PD + L
Sbjct: 543 GVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLY 602
Query: 384 DLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENRE 443
DLE+ ++K + HSEKLAL +GL++ + IRI KNLR+C DCH+ FK VS RE
Sbjct: 603 DLEE-EEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKRE 661
Query: 444 IVVRDRNRFHCFKDGACTCKDYW 466
I+VRD NRFH FKDG C+CKDYW
Sbjct: 662 IIVRDNNRFHRFKDGICSCKDYW 684
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 116/264 (43%), Gaps = 6/264 (2%)
Query: 10 GETRHARLM--FDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYG 67
G HAR++ D P +A N +I + + +AR + P RNV SWTS+I G
Sbjct: 25 GRVVHARIVKTLDSPPPPFLA--NYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISG 82
Query: 68 LAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRN 127
LA+ G AL F EM ++G PN+ T A A L GK +H A G + +
Sbjct: 83 LAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILD 142
Query: 128 VYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR 187
V+V + DMY K ++ ++F+ + ER + +W++ I R
Sbjct: 143 VFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRR 202
Query: 188 VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLE 247
+ PN +TF L+ACS ++ G L ++ R G V L+D + ++
Sbjct: 203 IDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRS-GFDTDVSVCNGLIDFYGKCKQIR 261
Query: 248 EAREVIANMSVPPNRVVWGALLGG 271
+ + M N V W +L+
Sbjct: 262 SSEIIFTEMGT-KNAVSWCSLVAA 284
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 101/230 (43%), Gaps = 10/230 (4%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR LF +P+RN+ +W + I G EA++ F E + PN +T A L AC+
Sbjct: 162 ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSD 221
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
L G +H +GF +V VCN LID Y KC + +F M + VSW S+
Sbjct: 222 WLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSL 281
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
+ + + + ++ + VL AC+ + ++ GR++ +
Sbjct: 282 VAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSI-----HAHA 336
Query: 226 IVPGVEHY----GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ VE LVD+ + G +E++ + M N V +L+GG
Sbjct: 337 VKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIGG 385
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+R I + ++ G + + F MP++N+ + S+I G A G + AL +F E
Sbjct: 342 ERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEE 401
Query: 84 MEKD--GSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGN-GFLRNVYVCNALIDMYVK 140
M G PN +T V++L AC++ G +E G + + G + ++DM +
Sbjct: 402 MAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGR 461
Query: 141 CGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMH 172
G +E Y + M + T+ W ++ MH
Sbjct: 462 AGMVERAYEFIKKMPIQPTISVWGALQNACRMH 494
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 329 bits (843), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 168/444 (37%), Positives = 265/444 (59%), Gaps = 2/444 (0%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+RD+ + +++ I+ G + + LF +M +++ SW +VI G + G + AL VF +
Sbjct: 528 ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQ 587
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M G + ++++ V AC+ L L G+ H +A + + ++ +LIDMY K G
Sbjct: 588 MVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGS 647
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
+ + +VF G++E++ SW++MI+G+ +H M R G P+ +TF+GVL A
Sbjct: 648 ITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTA 707
Query: 204 CSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIA-NMSVPPNR 262
C+H GL+ +G L M+ +G+ P ++HY C++D+L RAG+L++A V+A MS +
Sbjct: 708 CNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADV 767
Query: 263 VVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLM 322
+W +LL CR+H+N+ + E+ L +L+ YV++SN+YA GKWE+V ++R+ M
Sbjct: 768 GIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRM 827
Query: 323 KSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVL 382
++K GCS I ++ V FV G+ + I +W L +K+ GY PDT V
Sbjct: 828 NEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQ 887
Query: 383 LDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENR 442
DL + ++ E L HSEKLAL YGLI T G +IR+ KNLR+C DCH A KL+S++ R
Sbjct: 888 HDLSEEEKIEQ-LRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMER 946
Query: 443 EIVVRDRNRFHCFKDGACTCKDYW 466
EIVVRD RFH FK+G C+C DYW
Sbjct: 947 EIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 133/283 (46%), Gaps = 12/283 (4%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM- 84
D+ N +++ G+V A LF MP+RN+ SW S+I + G EE+ + EM
Sbjct: 221 DVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMM 280
Query: 85 EKDGSK---PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKC 141
E++G P+ T+V VL CA+ ++ GK VH +A + + + NAL+DMY KC
Sbjct: 281 EENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKC 340
Query: 142 GCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG--MKPNYVTFIG 199
GC+ +F+ + VVSW++M+ GF+ M+ G +K + VT +
Sbjct: 341 GCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILN 400
Query: 200 VLHACSHVGLVDKGRAL-LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM-S 257
+ C H + + L +++++ V + V ++ G L A+ V + S
Sbjct: 401 AVPVCFHESFLPSLKELHCYSLKQEFVYNELVAN--AFVASYAKCGSLSYAQRVFHGIRS 458
Query: 258 VPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYV 300
N W AL+GG + L+ +A + LL D + V
Sbjct: 459 KTVNS--WNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTV 499
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 127/261 (48%), Gaps = 15/261 (5%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N +A G + A+ +F + + V SW ++I G A+ +L +M+ G
Sbjct: 434 NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLL 493
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
P+ TV ++L AC++L L GK VH F N R+++V +++ +Y+ CG L +
Sbjct: 494 PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQAL 553
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
F+ M ++++VSW+++I G+ + M+ G++ ++ + V ACS + +
Sbjct: 554 FDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSL 613
Query: 211 DKGR-----ALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
GR AL ++ D I L+D+ ++ G + ++ +V + + W
Sbjct: 614 RLGREAHAYALKHLLEDDAFIACS------LIDMYAKNGSITQSSKVFNGLK-EKSTASW 666
Query: 266 GALLGGCRLHKNIVLAEEAMR 286
A++ G +H LA+EA++
Sbjct: 667 NAMIMGYGIHG---LAKEAIK 684
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 110/239 (46%), Gaps = 13/239 (5%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM-EKDGSKPNEVTVVAV 99
G +R +F ++ +N+ W +VI ++ + +E L+ F EM P+ T V
Sbjct: 134 GSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCV 193
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
+ ACA + D+ G +VH G + +V+V NAL+ Y G + + ++F+ M ER +
Sbjct: 194 IKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNL 253
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRV----GMKPNYVTFIGVLHACS---HVGLVDK 212
VSW+SMI F+ + M+ P+ T + VL C+ +GL
Sbjct: 254 VSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKG 313
Query: 213 GRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+R D +V L+D+ S+ G + A ++I M+ N V W ++GG
Sbjct: 314 VHGWAVKLRLDKELVLN----NALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMVGG 367
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 162/396 (40%), Gaps = 54/396 (13%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+++ N ++ G + A+ +F +NV SW +++ G + G V +
Sbjct: 324 DKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQ 383
Query: 84 MEKDGS--KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKC 141
M G K +EVT++ + C L K +H ++ F+ N V NA + Y KC
Sbjct: 384 MLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKC 443
Query: 142 GCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVL 201
G L RVF G+R +TV SW+++I G A M G+ P+ T +L
Sbjct: 444 GSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLL 503
Query: 202 HACSHVGLVDKGRALLTIMRRDY---------GIVPGVEHYGCLVDLLSRAGRLEEAREV 252
ACS + + G+ + + R++ ++ H G L + + +E+ V
Sbjct: 504 SACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLV 563
Query: 253 IANMSVP-------PNR--------VVWG---------ALLGGCRLHKNIVLAEEAMRHL 288
N + P+R V++G + G C L ++ L EA +
Sbjct: 564 SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 623
Query: 289 SKLDLLNDGYYVVMS--NVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFV 346
K LL D ++ S ++YA+ G + S++ +K K T +++ +
Sbjct: 624 LK-HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKE---KSTASWNAM---------I 670
Query: 347 AGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVL 382
G H AK +++E +M+ G+ PD L
Sbjct: 671 MGYGIHGLAKEAIKLFE----EMQRTGHNPDDLTFL 702
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 105/235 (44%), Gaps = 13/235 (5%)
Query: 65 IYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVA------VLVACAQLGDLEFGKSVHRF 118
I + G +++ + E D ++ ++ +L A + D+E G+ +H+
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109
Query: 119 AKGNGFLRNVYV-CNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
G+ LRN V C +I MY CG ++ VF+ +R + + W+++I ++ +
Sbjct: 110 VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDE 169
Query: 178 XXXXXXXMIR-VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCL 236
MI + P++ T+ V+ AC+ + V G A+ ++ + G+V V L
Sbjct: 170 VLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKT-GLVEDVFVGNAL 228
Query: 237 VDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL 291
V G + +A ++ M N V W +++ R+ + +EE+ L ++
Sbjct: 229 VSFYGTHGFVTDALQLFDIMP-ERNLVSWNSMI---RVFSDNGFSEESFLLLGEM 279
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 328 bits (841), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 174/458 (37%), Positives = 270/458 (58%), Gaps = 3/458 (0%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G HA+++ + + D +N+++ + G AR +F M +RNV +W S+I L+
Sbjct: 255 GRGIHAQIV-KRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLS 313
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
K E +F +M+++ + T+ +L AC+++ L GK +H + +V
Sbjct: 314 KKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVP 373
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
+ N+L+DMY KCG +E RVF+ M + + SW+ M+ +A++ MI G
Sbjct: 374 LLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESG 433
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
+ P+ +TF+ +L CS GL + G +L M+ ++ + P +EHY CLVD+L RAG+++EA
Sbjct: 434 VAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEA 493
Query: 250 REVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEA 309
+VI M P+ +WG+LL CRLH N+ + E A + L L+ N G YV++SN+YA+A
Sbjct: 494 VKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADA 553
Query: 310 GKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIF-EMWEKLLVK 368
W+ V +IR +MK RGVKK GCS + + + FVAG + + ++W +L
Sbjct: 554 KMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEA 613
Query: 369 MKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCED 428
++ GY P+TSVVL D+ D + K ++ HSE+LA Y LI+T G+ IRI KNLRVC D
Sbjct: 614 IEKSGYSPNTSVVLHDV-DEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCAD 672
Query: 429 CHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
CH+ K+VS++ R IV+RD RFH F DG C+CKDYW
Sbjct: 673 CHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 5/236 (2%)
Query: 46 ARDLFSSMPQRNV---RSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
AR +F + ++ + W ++ G ++ G +AL V+ +M +P ++ L A
Sbjct: 186 ARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKA 245
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
C L DL G+ +H + V N L+ +Y++ G ++ +VF+GM ER VV+W
Sbjct: 246 CVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTW 305
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR 222
+S+I + M + ++ T +L ACS V + G+ + + +
Sbjct: 306 NSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILK 365
Query: 223 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNI 278
P V L+D+ + G +E +R V M + + W +L ++ NI
Sbjct: 366 SKE-KPDVPLLNSLMDMYGKCGEVEYSRRVFDVM-LTKDLASWNIMLNCYAINGNI 419
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 39/176 (22%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMI-AHLINVGYVGAARDLFSSMPQRNVRS 60
L+ +Y CGE ++R +FD M +D+A+WNIM+ + IN
Sbjct: 378 LMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAIN--------------------- 416
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
G EE + +F M + G P+ +T VA+L C+ G E+G S+ K
Sbjct: 417 -----------GNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMK 465
Query: 121 GNGFLRNV---YVCNALIDMYVKCGCLEEGYRVFEGMRERTVVS-WSSMIVGFAMH 172
+ Y C L+D+ + G ++E +V E M + S W S++ +H
Sbjct: 466 TEFRVSPALEHYAC--LVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLH 519
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/425 (40%), Positives = 250/425 (58%), Gaps = 4/425 (0%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLA-KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACA 104
+ +F + ++ W ++I G + + EEA+K F +M++ G +P++ + V V AC+
Sbjct: 297 SEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACS 356
Query: 105 QLGDLEFGKSVHRFAKGNGFLRN-VYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWS 163
L K +H A + N + V NALI +Y K G L++ VF+ M E VS++
Sbjct: 357 NLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFN 416
Query: 164 SMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRD 223
MI G+A H M+ G+ PN +TF+ VL AC+H G VD+G+ M+
Sbjct: 417 CMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKET 476
Query: 224 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEE 283
+ I P EHY C++DLL RAG+LEEA I M P V W ALLG CR HKN+ LAE
Sbjct: 477 FKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAER 536
Query: 284 AMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVH 343
A L + L YV+++N+YA+A KWEE++ +R+ M+ + ++K PGCS I + H
Sbjct: 537 AANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKH 596
Query: 344 EFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDT--SVVLLDLEDAKQKEIFLYRHSEK 401
FVA D +HP + + E E+++ KMK GY+ D ++V D +E+ L HSEK
Sbjct: 597 VFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEK 656
Query: 402 LALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACT 461
LA+ +GL++T+ G + ++KNLR+C DCH A K +S + REI+VRD RFHCFKDG C+
Sbjct: 657 LAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCS 716
Query: 462 CKDYW 466
C DYW
Sbjct: 717 CGDYW 721
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 138/299 (46%), Gaps = 18/299 (6%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++LY+ CG +AR F + ++ ++N+++ + AR LF +PQ + S+
Sbjct: 49 FVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSY 108
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I G A A+ +F M K G + + T+ ++ AC DL K +H F+
Sbjct: 109 NTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVS 166
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRE-RTVVSWSSMIVGFAMHXXXXXXXX 180
GF V NA + Y K G L E VF GM E R VSW+SMIV + H
Sbjct: 167 GGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALA 226
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGV---EHYGC-L 236
MI G K + T VL+A + + + GR + I G H G L
Sbjct: 227 LYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKL-----IKAGFHQNSHVGSGL 281
Query: 237 VDLLSRAGRLE---EAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLD 292
+D S+ G + ++ +V + + P+ VVW ++ G +++ L+EEA++ ++
Sbjct: 282 IDFYSKCGGCDGMYDSEKVFQEI-LSPDLVVWNTMISGYSMNEE--LSEEAVKSFRQMQ 337
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 6/157 (3%)
Query: 14 HARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGM 73
H + +P I+ N +I+ G + AR +F MP+ N S+ +I G A+ G
Sbjct: 368 HGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGH 427
Query: 74 CEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLR---NVYV 130
EAL ++ M G PN++T VAVL ACA G ++ G+ K + Y
Sbjct: 428 GTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYS 487
Query: 131 CNALIDMYVKCGCLEEGYRVFEGMRERT-VVSWSSMI 166
C +ID+ + G LEE R + M + V+W++++
Sbjct: 488 C--MIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALL 522
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 325 bits (834), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 169/374 (45%), Positives = 236/374 (63%), Gaps = 3/374 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ YA G AR +FD+M +RD+ WN MI G + AA +LF SMP++NV SW
Sbjct: 123 LITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSW 182
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
T+VI G ++ G EALK+F MEKD S KPN +TVV+VL ACA LG+LE G+ + +A+
Sbjct: 183 TTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYAR 242
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM-RERTVVSWSSMIVGFAMHXXXXXXX 179
NGF N+YVCNA I+MY KCG ++ R+FE + +R + SW+SMI A H
Sbjct: 243 ENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEAL 302
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M+R G KP+ VTF+G+L AC H G+V KG+ L M + I P +EHYGC++DL
Sbjct: 303 TLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDL 362
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY 299
L R G+L+EA ++I M + P+ VVWG LLG C H N+ +AE A L KL+ N G
Sbjct: 363 LGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNC 422
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGV-VHEFVAGDETHPQAKGI 358
V+MSN+YA KW+ V R+R+LMK + K G S GV VH+F D++HP++ I
Sbjct: 423 VIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEI 482
Query: 359 FEMWEKLLVKMKMK 372
+++ E++ +MK++
Sbjct: 483 YQVLEEIFRRMKLE 496
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 105/275 (38%), Gaps = 33/275 (12%)
Query: 33 MIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPN 92
++ L+ + + AR LF + +I E++ +++ + DG +P+
Sbjct: 22 LLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPS 81
Query: 93 EVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE 152
T + A A + +H +GF + + C LI Y K G L RVF+
Sbjct: 82 HHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFD 141
Query: 153 GMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR------------------------- 187
M +R V W++MI G+ M R
Sbjct: 142 EMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKM 201
Query: 188 -------VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
+KPN++T + VL AC+++G ++ GR L R + G + +++
Sbjct: 202 FLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYAREN-GFFDNIYVCNATIEMY 260
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
S+ G ++ A+ + + N W +++G H
Sbjct: 261 SKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATH 295
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 325 bits (833), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 166/428 (38%), Positives = 250/428 (58%), Gaps = 1/428 (0%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N +I G + +++DLF+ + RN+ +W +++ A G EE LK+ S+M G
Sbjct: 486 NSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVS 545
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
++ + L A A+L LE G+ +H A GF + ++ NA DMY KCG + E ++
Sbjct: 546 LDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKM 605
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
R++ SW+ +I H M+ +G+KP +VTF+ +L ACSH GLV
Sbjct: 606 LPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLV 665
Query: 211 DKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
DKG A ++ RD+G+ P +EH C++DLL R+GRL EA I+ M + PN +VW +LL
Sbjct: 666 DKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLA 725
Query: 271 GCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKT 330
C++H N+ +A +LSKL+ +D YV+ SN++A G+WE+V +R+ M + +KK
Sbjct: 726 SCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKK 785
Query: 331 PGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQ 390
CS + + V F GD THPQ I+ E + +K GY+ DTS L D D +Q
Sbjct: 786 QACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQD-TDEEQ 844
Query: 391 KEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRN 450
KE L+ HSE+LAL Y L++T G ++RI KNLR+C DCH+ +K VS + R IV+RD+
Sbjct: 845 KEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQY 904
Query: 451 RFHCFKDG 458
RFH F+ G
Sbjct: 905 RFHHFERG 912
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 116/253 (45%), Gaps = 12/253 (4%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ +A N +I+ L ++G V A +F M +R+ SW S+ A+ G EE+ ++FS
Sbjct: 175 ESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSL 234
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M + + N TV +L + ++G+ +H GF V VCN L+ MY G
Sbjct: 235 MRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGR 294
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
E VF+ M + ++SW+S++ F MI G NYVTF L A
Sbjct: 295 SVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAA 354
Query: 204 CSHVGLVDKGR---ALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPP 260
C +KGR L+ + Y + G LV + + G + E+R V+ M P
Sbjct: 355 CFTPDFFEKGRILHGLVVVSGLFYNQIIG----NALVSMYGKIGEMSESRRVLLQM---P 407
Query: 261 NR--VVWGALLGG 271
R V W AL+GG
Sbjct: 408 RRDVVAWNALIGG 420
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 121/246 (49%), Gaps = 13/246 (5%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N +++ +G + +R + MP+R+V +W ++I G A+ ++AL F M +G
Sbjct: 384 NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVS 443
Query: 91 PNEVTVVAVLVACAQLGDL-EFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYR 149
N +TVV+VL AC GDL E GK +H + GF + +V N+LI MY KCG L
Sbjct: 444 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 503
Query: 150 VFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGL 209
+F G+ R +++W++M+ A H M G+ + +F L A + + +
Sbjct: 504 LFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 563
Query: 210 VDKGRALLTIMRRDYGIVPGVEH----YGCLVDLLSRAGRLEEAREVIA---NMSVPPNR 262
+++G+ L + G EH + D+ S+ G + E +++ N S+P
Sbjct: 564 LEEGQQL-----HGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWN 618
Query: 263 VVWGAL 268
++ AL
Sbjct: 619 ILISAL 624
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 116/260 (44%), Gaps = 19/260 (7%)
Query: 42 YVGAARDL-----FSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTV 96
Y GA R + F MP +++ SW S++ G +AL + M G N VT
Sbjct: 289 YAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTF 348
Query: 97 VAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRE 156
+ L AC E G+ +H +G N + NAL+ MY K G + E RV M
Sbjct: 349 TSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPR 408
Query: 157 RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVG-LVDKGRA 215
R VV+W+++I G+A M G+ NY+T + VL AC G L+++G+
Sbjct: 409 RDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKP 468
Query: 216 LLTIMRRDYGIVPGVEH----YGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
L Y + G E L+ + ++ G L ++++ + N + W A+L
Sbjct: 469 L-----HAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAA 522
Query: 272 CRLHKNIVLAEEAMRHLSKL 291
H + EE ++ +SK+
Sbjct: 523 NAHHGH---GEEVLKLVSKM 539
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 108/243 (44%), Gaps = 15/243 (6%)
Query: 34 IAHLINV-GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPN 92
I HL V G V +R +F MP RNV SWTS++ G + G EE + ++ M +G N
Sbjct: 83 ILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCN 142
Query: 93 EVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE 152
E ++ V+ +C L D G+ + +G + V N+LI M G ++ +F+
Sbjct: 143 ENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFD 202
Query: 153 GMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDK 212
M ER +SW+S+ +A + M R + N T +L HV
Sbjct: 203 QMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKW 262
Query: 213 GRALLTIMRRDYGIVP--GVEHYGCLVDLLSR----AGRLEEAREVIANMSVPPNRVVWG 266
GR + +G+V G + C+ + L R AGR EA V M + + W
Sbjct: 263 GRGI-------HGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT-KDLISWN 314
Query: 267 ALL 269
+L+
Sbjct: 315 SLM 317
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 116/245 (47%), Gaps = 6/245 (2%)
Query: 53 MPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDL-EF 111
MP RN SW +++ G+ + G+ E ++ F +M G KP+ + +++ AC + G +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 112 GKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAM 171
G VH F +G L +VYV A++ +Y G + +VFE M +R VVSW+S++VG++
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 172 HXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVE 231
M G+ N + V+ +C + GR ++ + + G+ +
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS-GLESKLA 179
Query: 232 HYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL 291
L+ +L G ++ A + MS + + W ++ + +I EE+ R S +
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQNGHI---EESFRIFSLM 235
Query: 292 DLLND 296
+D
Sbjct: 236 RRFHD 240
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 319 bits (818), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 161/373 (43%), Positives = 231/373 (61%), Gaps = 2/373 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMP--QRNVR 59
L+ +Y SCG AR MFD+M +D+ WN ++A VG + AR L MP RN
Sbjct: 157 LIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEV 216
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
SWT VI G AK G EA++VF M + +P+EVT++AVL ACA LG LE G+ + +
Sbjct: 217 SWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYV 276
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
G R V + NA+IDMY K G + + VFE + ER VV+W+++I G A H
Sbjct: 277 DHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEAL 336
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M++ G++PN VTFI +L ACSHVG VD G+ L MR YGI P +EHYGC++DL
Sbjct: 337 AMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDL 396
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY 299
L RAG+L EA EVI +M N +WG+LL +H ++ L E A+ L KL+ N G Y
Sbjct: 397 LGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNY 456
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIF 359
++++N+Y+ G+W+E +R +MK GVKK G SSI ++ V++F++GD THPQ + I
Sbjct: 457 MLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIH 516
Query: 360 EMWEKLLVKMKMK 372
E+ +++ ++++ K
Sbjct: 517 EILQEMDLQIQSK 529
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 120/285 (42%), Gaps = 42/285 (14%)
Query: 31 NIMIAHLI----NVGYVGAARDLFSSMPQRNVRSWTSVIYGLA---KCGMCEEALKVFSE 83
N+ +A I N G++ A +F+ P N ++I L+ + A+ V+ +
Sbjct: 47 NLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRK 106
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
+ +KP+ T VL ++ D+ FG+ +H GF +V+V LI MY CG
Sbjct: 107 LWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGG 166
Query: 144 LEEGYRVFEGMRERTV---------------------------------VSWSSMIVGFA 170
L + ++F+ M + V VSW+ +I G+A
Sbjct: 167 LGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYA 226
Query: 171 MHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGV 230
M+ ++P+ VT + VL AC+ +G ++ G + + + G+ V
Sbjct: 227 KSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHR-GMNRAV 285
Query: 231 EHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
++D+ +++G + +A +V ++ N V W ++ G H
Sbjct: 286 SLNNAVIDMYAKSGNITKALDVFECVN-ERNVVTWTTIIAGLATH 329
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 318 bits (814), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 154/375 (41%), Positives = 225/375 (60%), Gaps = 6/375 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
+ +YA C + AR +FD MP R++ MI+ AAR +F+ M +RNV SW
Sbjct: 295 FVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSW 354
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I G + G EEAL +F ++++ P + +L ACA L +L G H
Sbjct: 355 NALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLK 414
Query: 122 NGFL------RNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXX 175
+GF +++V N+LIDMYVKCGC+EEGY VF M ER VSW++MI+GFA +
Sbjct: 415 HGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYG 474
Query: 176 XXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGC 235
M+ G KP+++T IGVL AC H G V++GR + M RD+G+ P +HY C
Sbjct: 475 NEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTC 534
Query: 236 LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLN 295
+VDLL RAG LEEA+ +I M + P+ V+WG+LL C++H+NI L + L +++ N
Sbjct: 535 MVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSN 594
Query: 296 DGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQA 355
G YV++SN+YAE GKWE+V +R+ M+ GV K PGCS I I G H F+ D++HP+
Sbjct: 595 SGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRK 654
Query: 356 KGIFEMWEKLLVKMK 370
K I + + L+ +M+
Sbjct: 655 KQIHSLLDILIAEMR 669
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 170/333 (51%), Gaps = 12/333 (3%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ Y+ CG R +FDKMPQR+I TWN ++ L +G++ A LF SMP+R+ +W
Sbjct: 61 LIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTW 120
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
S++ G A+ CEEAL F+ M K+G NE + +VL AC+ L D+ G VH
Sbjct: 121 NSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAK 180
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+ FL +VY+ +AL+DMY KCG + + RVF+ M +R VVSW+S+I F +
Sbjct: 181 SPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDV 240
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M+ ++P+ VT V+ AC+ + + G+ + + ++ + + VD+ +
Sbjct: 241 FQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYA 300
Query: 242 RAGRLEEAREVIANMS----VPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG 297
+ R++EAR + +M + ++ G + ++ + A R++ + L G
Sbjct: 301 KCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAG 360
Query: 298 YYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKT 330
Y + G+ EE + L+K V T
Sbjct: 361 --------YTQNGENEEALSLFCLLKRESVCPT 385
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 35/226 (15%)
Query: 77 ALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLE--FGKSVHRFAKGNGFLRNVYVCNAL 134
A K F ++ D S + + A L+ L + + VH +GF +++ N L
Sbjct: 2 ATKSFLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRL 61
Query: 135 IDMYVKCGCLEEGYRVFEGMRERTVV-------------------------------SWS 163
ID Y KCG LE+G +VF+ M +R + +W+
Sbjct: 62 IDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWN 121
Query: 164 SMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRD 223
SM+ GFA H M + G N +F VL ACS + ++KG + +++ +
Sbjct: 122 SMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKS 181
Query: 224 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALL 269
+ V LVD+ S+ G + +A+ V M N V W +L+
Sbjct: 182 -PFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG-DRNVVSWNSLI 225
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 318 bits (814), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 185/470 (39%), Positives = 267/470 (56%), Gaps = 16/470 (3%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQ--RNVRSWTSVIYG 67
G+ HARL + +R+I + ++ V AR +F SM RNV SWTS+I
Sbjct: 150 GKNIHARLEISGL-RRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITA 208
Query: 68 LAKCGMCEEALKVFSEMEK--DGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL 125
A+ EA+++F + N+ + +V+ AC+ LG L++GK H G+
Sbjct: 209 YAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYE 268
Query: 126 RNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM 185
N V +L+DMY KCG L ++F +R +V+S++SMI+ A H M
Sbjct: 269 SNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEM 328
Query: 186 IRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGR 245
+ + PNYVT +GVLHACSH GLV++G L++M YG+VP HY C+VD+L R GR
Sbjct: 329 VAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGR 388
Query: 246 LEEAREVIANMSVPPNR--VVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMS 303
++EA E+ + V + ++WGALL RLH + + EA + L + + Y+ +S
Sbjct: 389 VDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALS 448
Query: 304 NVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWE 363
N YA +G WE+ +R MK G K CS I V+ F AGD + ++ I +
Sbjct: 449 NAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLK 508
Query: 364 KLLVKMKMKGY------IPDTSVVLLDL-EDAKQKEIFLYRHSEKLALVYGLINTKPGMS 416
L +MK +G+ I +S V +D+ E+AK + + L H E+LAL YGL++ G +
Sbjct: 509 DLEKRMKERGHRGSSSMITTSSSVFVDVDEEAKDEMVSL--HCERLALAYGLLHLPAGST 566
Query: 417 IRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
IRIM NLR+C DCH AFKL+SEI REIVVRD NRFHCFK+G+CTC+DYW
Sbjct: 567 IRIMNNLRMCRDCHEAFKLISEIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 111/233 (47%), Gaps = 6/233 (2%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D T N ++ + + + AR LF M + NV SWTSVI G G + AL +F +M
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 86 KDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCL 144
+D PNE T +V AC+ L + GK++H + +G RN+ V ++L+DMY KC +
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 145 EEGYRVFEGM--RERTVVSWSSMIVGFAMHXXXXXXXXXXXXM--IRVGMKPNYVTFIGV 200
E RVF+ M R VVSW+SMI +A + + N V
Sbjct: 183 ETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASV 242
Query: 201 LHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVI 253
+ ACS +G + G+ ++ R G L+D+ ++ G L A ++
Sbjct: 243 ISACSSLGRLQWGKVAHGLVTRG-GYESNTVVATSLLDMYAKCGSLSCAEKIF 294
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 317 bits (812), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 150/380 (39%), Positives = 239/380 (62%), Gaps = 7/380 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y + A +FD+M +RD+ +WN +++ +G + A+ LF M + + SW
Sbjct: 150 LIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSW 209
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
T++I G G EA+ F EM+ G +P+E+++++VL +CAQLG LE GK +H +A+
Sbjct: 210 TAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAER 269
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
GFL+ VCNALI+MY KCG + + ++F M + V+SWS+MI G+A H
Sbjct: 270 RGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIET 329
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M R +KPN +TF+G+L ACSHVG+ +G +MR+DY I P +EHYGCL+D+L+
Sbjct: 330 FNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLA 389
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RAG+LE A E+ M + P+ +WG+LL CR N+ +A AM HL +L+ + G YV+
Sbjct: 390 RAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVL 449
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
++N+YA+ GKWE+VSR+R+++++ +KKTPG S I ++ +V EFV+GD + P
Sbjct: 450 LANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKP-------F 502
Query: 362 WEKLLVKMKMKGYIPDTSVV 381
W ++ + +++ D V+
Sbjct: 503 WTEISIVLQLFTSHQDQDVI 522
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 136/313 (43%), Gaps = 37/313 (11%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM-EKDGSKPNEVTVVAVLVACA 104
A LF+ + NV + S+I + + ++++ ++ K P+ T + +CA
Sbjct: 61 ATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCA 120
Query: 105 QLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSS 164
LG GK VH G +V NALIDMY+K L + ++VF+ M ER V+SW+S
Sbjct: 121 SLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNS 180
Query: 165 MIVGFA-----------MHXXXXXXXXXXXXMIR--------------------VGMKPN 193
++ G+A H MI G++P+
Sbjct: 181 LLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPD 240
Query: 194 YVTFIGVLHACSHVGLVDKGRAL-LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV 252
++ I VL +C+ +G ++ G+ + L RR + GV L+++ S+ G + +A ++
Sbjct: 241 EISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGV--CNALIEMYSKCGVISQAIQL 298
Query: 253 IANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY-YVVMSNVYAEAGK 311
M + + W ++ G H N A E + + + +G ++ + + + G
Sbjct: 299 FGQME-GKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGM 357
Query: 312 WEEVSRIRRLMKS 324
W+E R +M+
Sbjct: 358 WQEGLRYFDMMRQ 370
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 316 bits (810), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 163/443 (36%), Positives = 259/443 (58%), Gaps = 4/443 (0%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
++ N I G + ++ LF + +N+ SW ++I + G+ E+ L F+
Sbjct: 168 EVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSR 227
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
+ G +P++ T +AVL +C +G + + +H GF N + AL+D+Y K G LE
Sbjct: 228 RVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLE 287
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
+ VF + ++W++M+ +A H M+ G+ P++VTF +L+ACS
Sbjct: 288 DSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACS 347
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
H GLV++G+ M + Y I P ++HY C+VDLL R+G L++A +I M + P+ VW
Sbjct: 348 HSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVW 407
Query: 266 GALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSR 325
GALLG CR++K+ L +A L +L+ + YV++SN+Y+ +G W++ SRIR LMK +
Sbjct: 408 GALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQK 467
Query: 326 GVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMK-GYIPDTSVVLLD 384
G+ + GCS I +H+FV GD +HP+++ I + +++ KMK + GY T VL D
Sbjct: 468 GLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHD 527
Query: 385 L-EDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENRE 443
+ ED K++ I +HSEK+A+ +GL+ P I I KNLR+C DCH K +S IE R
Sbjct: 528 VGEDVKEEMI--NQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRR 585
Query: 444 IVVRDRNRFHCFKDGACTCKDYW 466
I++RD RFH F DG+C+C DYW
Sbjct: 586 IIIRDSKRFHHFLDGSCSCSDYW 608
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 126/257 (49%), Gaps = 15/257 (5%)
Query: 38 INVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM--EKDGSKPNEVT 95
+ +G+ A LF MP+R++ SW S+I G + G + +V S M + G +PNEVT
Sbjct: 77 LRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVT 136
Query: 96 VVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR 155
++++ AC G E G+ +H G L V V NA I+ Y K G L ++FE +
Sbjct: 137 FLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLS 196
Query: 156 ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRA 215
+ +VSW++MIV + RVG +P+ TF+ VL +C +G+V +
Sbjct: 197 IKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQG 256
Query: 216 LLTIMRRDYGIVPGVEHYGC----LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ ++ + G C L+DL S+ GRLE++ V ++ P+ + W A+L
Sbjct: 257 IHGLI-----MFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEIT-SPDSMAWTAMLAA 310
Query: 272 CRLHKNIVLAEEAMRHL 288
H +A++H
Sbjct: 311 YATHG---FGRDAIKHF 324
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 316 bits (809), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 173/451 (38%), Positives = 260/451 (57%), Gaps = 5/451 (1%)
Query: 17 LMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEE 76
LM + +A+ ++ + V + +F + N SWTS+I GL + G E
Sbjct: 292 LMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEM 351
Query: 77 ALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALID 136
AL F +M +D KPN T+ + L C+ L E G+ +H GF R+ Y + LID
Sbjct: 352 ALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLID 411
Query: 137 MYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVT 196
+Y KCGC + VF+ + E V+S ++MI +A + MI +G++PN VT
Sbjct: 412 LYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVT 471
Query: 197 FIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM 256
+ VL AC++ LV++G L R+D I+ +HY C+VDLL RAGRLEEA E++
Sbjct: 472 VLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEA-EMLTTE 529
Query: 257 SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVS 316
+ P+ V+W LL C++H+ + +AE R + +++ ++G ++MSN+YA GKW V
Sbjct: 530 VINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVI 589
Query: 317 RIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDE-THPQAKGIFEMWEKLLVKMKMKGYI 375
++ MK +KK P S + I+ H F+AGD +HP ++ I E E+L+ K K GY+
Sbjct: 590 EMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYV 649
Query: 376 PDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKL 435
D S V D+E+ KE L++HSEKLA+ + + G SIRI+KNLRVC DCH+ K+
Sbjct: 650 EDKSCVFQDMEET-AKERSLHQHSEKLAIAFAVWRNVGG-SIRILKNLRVCVDCHSWIKI 707
Query: 436 VSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
VS + REI+ RD RFH F+DG+C+C DYW
Sbjct: 708 VSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 144/351 (41%), Gaps = 73/351 (20%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y G+TR A+L+ D++ ++D+ ++I LI VGY D
Sbjct: 207 LVDMYVKFGKTREAKLVLDRVEEKDV----VLITALI-VGYSQKGED------------- 248
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
EA+K F M + +PNE T +VL++C L D+ GK +H
Sbjct: 249 -------------TEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVK 295
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+GF + +L+ MY++C +++ RVF+ + VSW+S+I G +
Sbjct: 296 SGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIE 355
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M+R +KPN T L CS++ + ++GR + I+ + YG L+DL
Sbjct: 356 FRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTK-YGFDRDKYAGSGLIDLYG 414
Query: 242 RAGRLEEAR----------------------------------EVIANMSVPPNRVVWGA 267
+ G + AR E + N+ + PN V +
Sbjct: 415 KCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLS 474
Query: 268 LLGGCRLHKNIVLAEEAMRHLSKLD----LLNDGYYVVMSNVYAEAGKWEE 314
+L C N L EE +L + +Y M ++ AG+ EE
Sbjct: 475 VLLAC---NNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEE 522
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 116/235 (49%), Gaps = 3/235 (1%)
Query: 38 INVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVV 97
+ G + AR +F M +R++ +W S+I L K +EA++++ M + P+E T+
Sbjct: 110 LKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLS 169
Query: 98 AVLVACAQLGDLEFGKSVHRFAKGNGF-LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRE 156
+V A + L + + H A G + NV+V +AL+DMYVK G E V + + E
Sbjct: 170 SVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEE 229
Query: 157 RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL 216
+ VV +++IVG++ M+ ++PN T+ VL +C ++ + G+ +
Sbjct: 230 KDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLI 289
Query: 217 LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+M + G + L+ + R ++++ V + PN+V W +L+ G
Sbjct: 290 HGLMVKS-GFESALASQTSLLTMYLRCSLVDDSLRVFKCIEY-PNQVSWTSLISG 342
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 6/123 (4%)
Query: 134 LIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPN 193
L+D +KCG ++ +VF+GM ER +V+W+S+I H MI + P+
Sbjct: 105 LVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPD 164
Query: 194 YVTFIGVLHACSHVGL---VDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAR 250
T V A S + L + L I+ + V V LVD+ + G+ EA+
Sbjct: 165 EYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLE---VSNVFVGSALVDMYVKFGKTREAK 221
Query: 251 EVI 253
V+
Sbjct: 222 LVL 224
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 315 bits (808), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 178/447 (39%), Positives = 256/447 (57%), Gaps = 8/447 (1%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQR--NVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ T N +IA G + +FS M +R NV +W S+I G + +AL +
Sbjct: 551 EATTENALIACYGKCGEMDGCEKIFSRMAERRDNV-TWNSMISGYIHNELLAKALDLVWF 609
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M + G + + VL A A + LE G VH + +V V +AL+DMY KCG
Sbjct: 610 MLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGR 669
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKP-NYVTFIGVLH 202
L+ R F M R SW+SMI G+A H M G P ++VTF+GVL
Sbjct: 670 LDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLS 729
Query: 203 ACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR 262
ACSH GL+++G M YG+ P +EH+ C+ D+L RAG L++ + I M + PN
Sbjct: 730 ACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNV 789
Query: 263 VVWGALLGGC-RLH-KNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRR 320
++W +LG C R + + L ++A L +L+ N YV++ N+YA G+WE++ + R+
Sbjct: 790 LIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARK 849
Query: 321 LMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSV 380
MK VKK G S +T+ VH FVAGD++HP A I++ ++L KM+ GY+P T
Sbjct: 850 KMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGF 909
Query: 381 VLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPG-MSIRIMKNLRVCEDCHAAFKLVSEI 439
L DLE ++EI Y HSEKLA+ + L + + IRIMKNLRVC DCH+AFK +S+I
Sbjct: 910 ALYDLEQENKEEILSY-HSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKI 968
Query: 440 ENREIVVRDRNRFHCFKDGACTCKDYW 466
E R+I++RD NRFH F+DGAC+C D+W
Sbjct: 969 EGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 141/310 (45%), Gaps = 14/310 (4%)
Query: 14 HARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGM 73
H+RL +++ +D+ N +I + G +AR +F MP RN SW ++ G ++ G
Sbjct: 24 HSRLYKNRL-DKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 74 CEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGD--LEFGKSVHRFAKGNGFLRNVYVC 131
+EAL +M K+G N+ V+VL AC ++G + FG+ +H + + V
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 132 NALIDMYVKC-GCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGM 190
N LI MY KC G + F + + VSW+S+I ++ M G
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 191 KPNYVTFIG-VLHACS----HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGR 245
+P TF V ACS V L+++ + TI + G++ + LV +++G
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQ--IMCTIQKS--GLLTDLFVGSGLVSAFAKSGS 258
Query: 246 LEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNV 305
L AR+V M + G ++G R + M S +D+ + Y +++S+
Sbjct: 259 LSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSS- 317
Query: 306 YAEAGKWEEV 315
+ E EEV
Sbjct: 318 FPEYSLAEEV 327
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 109/242 (45%), Gaps = 2/242 (0%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N ++ G + AR +F M ++ SW S+I GL + G EA++ + M +
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL 412
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
P T+++ L +CA L + G+ +H + G NV V NAL+ +Y + G L E ++
Sbjct: 413 PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKI 472
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXX-XXXMIRVGMKPNYVTFIGVLHACSHVGL 209
F M E VSW+S+I A R G K N +TF VL A S +
Sbjct: 473 FSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSF 532
Query: 210 VDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALL 269
+ G+ + + ++ I L+ + G ++ ++ + M+ + V W +++
Sbjct: 533 GELGKQIHGLALKN-NIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMI 591
Query: 270 GG 271
G
Sbjct: 592 SG 593
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 139/313 (44%), Gaps = 18/313 (5%)
Query: 17 LMFDKMPQRDIATWNIMIA-HLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCE 75
LMF D N++I+ + +G VG A F + +N SW S+I ++ G
Sbjct: 129 LMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQR 188
Query: 76 EALKVFSEMEKDGSKPNEVTVVAVLVACAQLG--DLEFGKSVHRFAKGNGFLRNVYVCNA 133
A ++FS M+ DGS+P E T +++ L D+ + + + +G L +++V +
Sbjct: 189 SAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSG 248
Query: 134 LIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR-VGMKP 192
L+ + K G L +VF M R V+ + ++VG M + + P
Sbjct: 249 LVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSP 308
Query: 193 -NYVTFIGVLHACS---HVGLVDKGRAL----LTIMRRDYGIVPGVEHYGCLVDLLSRAG 244
+YV + S VGL KGR + +T D+ + G LV++ ++ G
Sbjct: 309 ESYVILLSSFPEYSLAEEVGL-KKGREVHGHVITTGLVDFMVGIG----NGLVNMYAKCG 363
Query: 245 RLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSN 304
+ +AR V M+ + V W +++ G + + A E + + + D+L + ++ S
Sbjct: 364 SIADARRVFYFMT-DKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSL 422
Query: 305 VYAEAGKWEEVSR 317
+ KW ++ +
Sbjct: 423 SSCASLKWAKLGQ 435
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ D+ + ++ G + A F++MP RN SW S+I G A+ G EEALK+F
Sbjct: 651 ESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFET 710
Query: 84 MEKDG-SKPNEVTVVAVLVACAQLGDLEFG-KSVHRFAKGNGFLRNVYVCNALIDMYVKC 141
M+ DG + P+ VT V VL AC+ G LE G K + G + + + D+ +
Sbjct: 711 MKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRA 770
Query: 142 GCLEEGYRVFEGMRER-TVVSWSSMI 166
G L++ E M + V+ W +++
Sbjct: 771 GELDKLEDFIEKMPMKPNVLIWRTVL 796
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 315 bits (807), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 172/442 (38%), Positives = 247/442 (55%), Gaps = 2/442 (0%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
DI N +I + A LF+ + +N SW +VI G G +A +F E
Sbjct: 382 DIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREAL 441
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
++ EVT + L ACA L ++ G VH A + V V N+LIDMY KCG ++
Sbjct: 442 RNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIK 501
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
VF M V SW+++I G++ H M KPN +TF+GVL CS
Sbjct: 502 FAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCS 561
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
+ GL+D+G+ M RD+GI P +EHY C+V LL R+G+L++A ++I + P+ ++W
Sbjct: 562 NAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIW 621
Query: 266 GALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSR 325
A+L N A + + K++ ++ YV++SN+YA A +W V+ IR+ MK
Sbjct: 622 RAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEM 681
Query: 326 GVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDL 385
GVKK PG S I G VH F G HP K I M E L +K GY+PD + VLLD+
Sbjct: 682 GVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDM 741
Query: 386 EDAKQKEIFLYRHSEKLALVYGLINTKPGMS-IRIMKNLRVCEDCHAAFKLVSEIENREI 444
+D ++K+ L+ HSE+LAL YGL+ + I IMKNLR+C DCH+A K++S I R++
Sbjct: 742 DD-EEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDL 800
Query: 445 VVRDRNRFHCFKDGACTCKDYW 466
V+RD NRFH F G C+C D+W
Sbjct: 801 VIRDMNRFHHFHAGVCSCGDHW 822
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 120/258 (46%), Gaps = 8/258 (3%)
Query: 39 NVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVA 98
+G + A +F+ MP+ +V W+ +I + G C EA+ +F M + PNE T+ +
Sbjct: 294 QLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSS 353
Query: 99 VLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERT 158
+L CA G+ +H GF ++YV NALID+Y KC ++ ++F + +
Sbjct: 354 ILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKN 413
Query: 159 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT 218
VSW+++IVG+ +R + VTF L AC+ + +D G +
Sbjct: 414 EVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHG 473
Query: 219 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNI 278
+ + V L+D+ ++ G ++ A+ V M + W AL+ G H
Sbjct: 474 LAIKTNN-AKKVAVSNSLIDMYAKCGDIKFAQSVFNEMET-IDVASWNALISGYSTHG-- 529
Query: 279 VLAEEAMRHLSKLDLLND 296
L +A+R LD++ D
Sbjct: 530 -LGRQALR---ILDIMKD 543
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 110/247 (44%), Gaps = 10/247 (4%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ NI++ + G+ A +LF MP+RN S+ ++ G A C++ + ++S +
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLH 138
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
++G + N + L L E +H G+ N +V ALI+ Y CG ++
Sbjct: 139 REGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVD 198
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
VFEG+ + +V W+ ++ + + M G PN TF L A
Sbjct: 199 SARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASI 258
Query: 206 HVGLVDKGRALL-TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV 264
+G D + + I++ Y + P V L+ L ++ G + +A +V M P N VV
Sbjct: 259 GLGAFDFAKGVHGQILKTCYVLDPRVGV--GLLQLYTQLGDMSDAFKVFNEM--PKNDVV 314
Query: 265 -WGALLG 270
W ++
Sbjct: 315 PWSFMIA 321
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 12/244 (4%)
Query: 35 AHLINV----GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
A LIN G V +AR +F + +++ W ++ + G E++LK+ S M G
Sbjct: 185 AALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFM 244
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
PN T L A LG +F K VH ++ + V L+ +Y + G + + ++V
Sbjct: 245 PNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKV 304
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS---HV 207
F M + VV WS MI F + M + PN T +L+ C+
Sbjct: 305 FNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCS 364
Query: 208 GLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGA 267
GL ++ L+ + D I L+D+ ++ +++ A ++ A +S N V W
Sbjct: 365 GLGEQLHGLVVKVGFDLDIYVS----NALIDVYAKCEKMDTAVKLFAELS-SKNEVSWNT 419
Query: 268 LLGG 271
++ G
Sbjct: 420 VIVG 423
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 72/144 (50%), Gaps = 2/144 (1%)
Query: 25 RDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM 84
+ +A N +I G + A+ +F+ M +V SW ++I G + G+ +AL++ M
Sbjct: 482 KKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIM 541
Query: 85 EKDGSKPNEVTVVAVLVACAQLGDLEFGKS-VHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
+ KPN +T + VL C+ G ++ G+ + +G + ++ + + G
Sbjct: 542 KDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQ 601
Query: 144 LEEGYRVFEGMR-ERTVVSWSSMI 166
L++ ++ EG+ E +V+ W +M+
Sbjct: 602 LDKAMKLIEGIPYEPSVMIWRAML 625
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 313 bits (803), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 153/387 (39%), Positives = 233/387 (60%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L++ YA+CGE A +F M RD+ +W ++ + G + AR F MP R+ SW
Sbjct: 277 LVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISW 336
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
T +I G + G E+L++F EM+ G P+E T+V+VL ACA LG LE G+ + +
Sbjct: 337 TIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDK 396
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
N +V V NALIDMY KCGC E+ +VF M +R +W++M+VG A +
Sbjct: 397 NKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKV 456
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M + ++P+ +T++GVL AC+H G+VD+ R MR D+ I P + HYGC+VD+L
Sbjct: 457 FFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLG 516
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RAG ++EA E++ M + PN +VWGALLG RLH + +AE A + + +L+ N Y +
Sbjct: 517 RAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYAL 576
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
+ N+YA +W+++ +RR + +KKTPG S I ++G HEFVAGD++H Q++ I+
Sbjct: 577 LCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMK 636
Query: 362 WEKLLVKMKMKGYIPDTSVVLLDLEDA 388
E+L + Y+PDTS +L + DA
Sbjct: 637 LEELAQESTFAAYLPDTSELLFEAGDA 663
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 129/301 (42%), Gaps = 64/301 (21%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y+ CG AR +FD+ + D+ +WN+MI+
Sbjct: 176 LVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMIS-------------------------- 209
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
G + EE++++ EME++ P VT++ VL AC+++ D + K VH +
Sbjct: 210 -----GYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSE 264
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSS----------------- 164
++ + NAL++ Y CG ++ R+F M+ R V+SW+S
Sbjct: 265 CKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTY 324
Query: 165 --------------MIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
MI G+ M GM P+ T + VL AC+H+G +
Sbjct: 325 FDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSL 384
Query: 211 DKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
+ G + T + ++ I V L+D+ + G E+A++V +M ++ W A++
Sbjct: 385 EIGEWIKTYIDKN-KIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMD-QRDKFTWTAMVV 442
Query: 271 G 271
G
Sbjct: 443 G 443
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 128/288 (44%), Gaps = 6/288 (2%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G+V A LF +P+ +V W ++I G +K E ++++ M K+G P+ T +L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 101 VACAQLGD-LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
+ G L GK +H G N+YV NAL+ MY CG ++ VF+ + V
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
SW+ MI G+ M R + P VT + VL ACS V D + +
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEY 261
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIV 279
+ + P + LV+ + G ++ A + +M + + W +++ G N+
Sbjct: 262 V-SECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKA-RDVISWTSIVKGYVERGNLK 319
Query: 280 LAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGV 327
LA + D ++ + +M + Y AG + E I R M+S G+
Sbjct: 320 LARTYFDQMPVRDRIS---WTIMIDGYLRAGCFNESLEIFREMQSAGM 364
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 312 bits (800), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 248/426 (58%), Gaps = 1/426 (0%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G V A+ +F +N+ T+++ + EEAL +FS+M+ PNE T +L
Sbjct: 286 GKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILL 345
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
+ A+L L+ G +H +G+ +V V NAL++MY K G +E+ + F GM R +V
Sbjct: 346 NSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIV 405
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
+W++MI G + H MI G PN +TFIGVL ACSH+G V++G +
Sbjct: 406 TWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQL 465
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
+ + + P ++HY C+V LLS+AG ++A + + + + V W LL C + +N L
Sbjct: 466 MKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRL 525
Query: 281 AEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDG 340
++ + + + G YV++SN++A++ +WE V+++R LM +RGVKK PG S I I
Sbjct: 526 GKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRN 585
Query: 341 VVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSE 400
H F+A D HP+ I+ ++++ K+K GY PD + D+ D +Q+E L HSE
Sbjct: 586 QTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDV-DEEQREDNLSYHSE 644
Query: 401 KLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGAC 460
KLA+ YGLI T + + KN+R+C+DCH+A KL+S+I R IV+RD NRFH F DG C
Sbjct: 645 KLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQC 704
Query: 461 TCKDYW 466
+C DYW
Sbjct: 705 SCCDYW 710
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 130/310 (41%), Gaps = 12/310 (3%)
Query: 6 YASCGETRHARLMFDKMPQR--DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTS 63
Y GE+ HA L+ R D N +I + AR LF MP+RNV SW +
Sbjct: 46 YLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCA 105
Query: 64 VIYGLAKCGMCEEALKVFSEMEKDG-SKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGN 122
++ G G E LK+F M G S+PNE V +C+ G +E GK H
Sbjct: 106 MMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKY 165
Query: 123 GFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXX 182
G + + +V N L+ MY C E RV + + + +SS + G+
Sbjct: 166 GLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVL 225
Query: 183 XXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSR 242
N +T++ L S++ ++ + + M R +G VE G L+++ +
Sbjct: 226 RKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVR-FGFNAEVEACGALINMYGK 284
Query: 243 AGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDL----LNDGY 298
G++ A+ V + N + ++ K+ EEA+ SK+D N+
Sbjct: 285 CGKVLYAQRVFDDTHA-QNIFLNTTIMDAYFQDKSF---EEALNLFSKMDTKEVPPNEYT 340
Query: 299 YVVMSNVYAE 308
+ ++ N AE
Sbjct: 341 FAILLNSIAE 350
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 111/248 (44%), Gaps = 5/248 (2%)
Query: 44 GAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVAC 103
G A + +P ++ ++S + G +CG +E L V + + N +T ++ L
Sbjct: 188 GEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLF 247
Query: 104 AQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWS 163
+ L DL VH GF V C ALI+MY KCG + RVF+ + + +
Sbjct: 248 SNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNT 307
Query: 164 SMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRD 223
+++ + M + PN TF +L++ + + L+ +G L ++ +
Sbjct: 308 TIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKS 367
Query: 224 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEE 283
G V LV++ +++G +E+AR+ + M+ + V W ++ GC H L E
Sbjct: 368 -GYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTF-RDIVTWNTMISGCSHHG---LGRE 422
Query: 284 AMRHLSKL 291
A+ ++
Sbjct: 423 ALEAFDRM 430
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N ++ G + AR FS M R++ +W ++I G + G+ EAL+ F M G
Sbjct: 377 NALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEI 436
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
PN +T + VL AC+ +G +E G +H F +
Sbjct: 437 PNRITFIGVLQACSHIGFVEQG--LHYFNQ 464
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 312 bits (799), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 168/422 (39%), Positives = 249/422 (59%), Gaps = 4/422 (0%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
+ A D+F ++P++NV SWTS+I GL C EAL +F K +PN +T+ A L A
Sbjct: 449 IDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAA 507
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
CA++G L GK +H G + ++ NAL+DMYV+CG + + F +++ V SW
Sbjct: 508 CARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSW 566
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR 222
+ ++ G++ M++ ++P+ +TFI +L CS +V +G + M
Sbjct: 567 NILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKME- 625
Query: 223 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAE 282
DYG+ P ++HY C+VDLL RAG L+EA + I M V P+ VWGALL CR+H I L E
Sbjct: 626 DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGE 685
Query: 283 EAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVV 342
+ +H+ +LD + GYY+++ N+YA+ GKW EV+++RR+MK G+ GCS + + G V
Sbjct: 686 LSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKV 745
Query: 343 HEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKL 402
H F++ D+ HPQ K I + E KM G + +D + + EIF HSE+
Sbjct: 746 HAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFC-GHSERK 804
Query: 403 ALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTC 462
A+ +GLINT PGM I + KNL +CE+CH K +S+ REI VRD FH FKDG C+C
Sbjct: 805 AIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSC 864
Query: 463 KD 464
D
Sbjct: 865 GD 866
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 136/265 (51%), Gaps = 6/265 (2%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
DI N +I + G V +AR LF MP+R++ SW ++I G + GMC E L++F M
Sbjct: 230 DIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMR 289
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
P+ +T+ +V+ AC LGD G+ +H + GF ++ VCN+L MY+ G
Sbjct: 290 GLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWR 349
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
E ++F M + +VSW++MI G+ + M + +KP+ +T VL AC+
Sbjct: 350 EAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACA 409
Query: 206 HVGLVDKGRAL--LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRV 263
+G +D G L L I R ++ V L+++ S+ +++A ++ N+ N +
Sbjct: 410 TLGDLDTGVELHKLAIKAR---LISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVI 465
Query: 264 VWGALLGGCRLHKNIVLAEEAMRHL 288
W +++ G RL+ A +R +
Sbjct: 466 SWTSIIAGLRLNNRCFEALIFLRQM 490
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 112/242 (46%), Gaps = 3/242 (1%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM-EKDGS 89
N +A + G + A +F M +RN+ SW ++ G AK G +EA+ ++ M G
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 90 KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYR 149
KP+ T VL C + DL GK VH G+ ++ V NALI MYVKCG ++
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 150 VFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGL 209
+F+ M R ++SW++MI G+ + M + + P+ +T V+ AC +G
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 210 VDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALL 269
GR + + G + L + AG EA ++ + M + V W ++
Sbjct: 313 RRLGRDIHAYVITT-GFAVDISVCNSLTQMYLNAGSWREAEKLFSRME-RKDIVSWTTMI 370
Query: 270 GG 271
G
Sbjct: 371 SG 372
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 7/210 (3%)
Query: 65 IYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGF 124
++GL G EEA+K+ + M++ +E VA++ C E G V+ A +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 125 LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXX 184
V + NA + M+V+ G L + + VF M ER + SW+ ++ G+A
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 185 MIRV-GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRA 243
M+ V G+KP+ TF VL C + + +G+ + + R YG ++ L+ + +
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVR-YGYELDIDVVNALITMYVKC 244
Query: 244 GRLEEAREVIANMSVPPNR--VVWGALLGG 271
G ++ AR + M P R + W A++ G
Sbjct: 245 GDVKSARLLFDRM---PRRDIISWNAMISG 271
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 8/139 (5%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVR-- 59
LL +Y CG A F+ ++D+ +WNI++ G +LF M + VR
Sbjct: 539 LLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPD 597
Query: 60 --SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
++ S++ G +K M + L FS+ME G PN V+ + G+L+ H+
Sbjct: 598 EITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQ---EAHK 654
Query: 118 FAKGNGFLRNVYVCNALID 136
F + + V AL++
Sbjct: 655 FIQKMPVTPDPAVWGALLN 673
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 309 bits (792), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 150/370 (40%), Positives = 231/370 (62%), Gaps = 5/370 (1%)
Query: 2 LLHLYASC-GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS 60
LLH YAS AR +FD+M +R++ +W M++ G + A LF MP+R+V S
Sbjct: 167 LLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPS 226
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
W +++ + G+ EA+ +F M + S +PNEVTVV VL ACAQ G L+ K +H FA
Sbjct: 227 WNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFA 286
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
+V+V N+L+D+Y KCG LEE VF+ ++++ +W+SMI FA+H
Sbjct: 287 YRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAI 346
Query: 180 XXXXXMIRVGM---KPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCL 236
M+++ + KP+++TFIG+L+AC+H GLV KGR +M +GI P +EHYGCL
Sbjct: 347 AVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCL 406
Query: 237 VDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLND 296
+DLL RAGR +EA EV++ M + + +WG+LL C++H ++ LAE A+++L L+ N
Sbjct: 407 IDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNG 466
Query: 297 GYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAK 356
GY +M+N+Y E G WEE R R+++K + K PG S I ID VH+F + D++HP+ +
Sbjct: 467 GYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETE 526
Query: 357 GIFEMWEKLL 366
I+ + + L+
Sbjct: 527 EIYMILDSLI 536
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 308 bits (789), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 162/446 (36%), Positives = 241/446 (54%), Gaps = 13/446 (2%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ +++ ++ I +A F + + N SW+++I G + EEA+K F
Sbjct: 317 ESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKS 376
Query: 84 M-EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG 142
+ K+ S N T ++ AC+ L D G VH A + + Y +ALI MY KCG
Sbjct: 377 LRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCG 436
Query: 143 CLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLH 202
CL++ VFE M +V+W++ I G A + M+ GMKPN VTFI VL
Sbjct: 437 CLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLT 496
Query: 203 ACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR 262
ACSH GLV++G+ L M R Y + P ++HY C++D+ +R+G L+EA + + NM P+
Sbjct: 497 ACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDA 556
Query: 263 VVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLM 322
+ W L GC HKN+ L E A L +LD + YV+ N+Y AGKWEE + + +LM
Sbjct: 557 MSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLM 616
Query: 323 KSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVL 382
R +KK CS I G +H F+ GD+ HPQ + I+E K+K + +
Sbjct: 617 NERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYE-------KLKEFDGFMEGDMFQ 669
Query: 383 LDLEDAKQKEIFLYRHSEKLALVYGLINT--KPGMSIRIMKNLRVCEDCHAAFKLVSEIE 440
++ + +++ L HSE+LA+ +GLI+ I++ KNLR C DCH K VS +
Sbjct: 670 CNMTERREQ---LLDHSERLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVT 726
Query: 441 NREIVVRDRNRFHCFKDGACTCKDYW 466
EIV+RD RFH FK+G C+C DYW
Sbjct: 727 GHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 115/259 (44%), Gaps = 14/259 (5%)
Query: 38 INVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVV 97
+ G++ A+ +F M + + T ++ G + G +ALK+F ++ +G + +
Sbjct: 230 VKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFS 289
Query: 98 AVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER 157
VL ACA L +L GK +H G V V L+D Y+KC E R F+ +RE
Sbjct: 290 VVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREP 349
Query: 158 TVVSWSSMIVGF-AMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL 216
VSWS++I G+ M + N T+ + ACS + + G +
Sbjct: 350 NDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQV 409
Query: 217 L--TIMRRDYGIVPGVEHYG--CLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGC 272
I R G YG L+ + S+ G L++A EV +M P+ V W A + G
Sbjct: 410 HADAIKRSLIG-----SQYGESALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISGH 463
Query: 273 RLHKNIVLAEEAMRHLSKL 291
+ N A EA+R K+
Sbjct: 464 AYYGN---ASEALRLFEKM 479
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 129/295 (43%), Gaps = 14/295 (4%)
Query: 5 LYASCGETR---HARLMFDKM----PQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRN 57
L+ +C E R H RL+ D+M + N ++ + A LF M + N
Sbjct: 89 LFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELN 148
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
S T++I A+ G+ ++A+ +FS M G KP +L + L+FG+ +H
Sbjct: 149 AVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHA 208
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
G N + +++MYVKCG L RVF+ M + V+ + ++VG+
Sbjct: 209 HVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARD 268
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
++ G++ + F VL AC+ + ++ G+ + + + G+ V LV
Sbjct: 269 ALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAK-LGLESEVSVGTPLV 327
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG-CRLHKNIVLAEEAMRHLSKL 291
D + E A + PN V W A++ G C++ + EEA++ L
Sbjct: 328 DFYIKCSSFESACRAFQEIR-EPNDVSWSAIISGYCQMSQ----FEEAVKTFKSL 377
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 1/206 (0%)
Query: 65 IYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGF 124
+ L+K EA + EM+K G + + + AC +L L G+ +H +
Sbjct: 55 LVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIE 114
Query: 125 LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXX 184
+V + N ++ MY +C LE+ ++F+ M E VS ++MI +A
Sbjct: 115 NPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSG 174
Query: 185 MIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAG 244
M+ G KP + +L + + +D GR + + R G+ +V++ + G
Sbjct: 175 MLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIR-AGLCSNTSIETGIVNMYVKCG 233
Query: 245 RLEEAREVIANMSVPPNRVVWGALLG 270
L A+ V M+V G ++G
Sbjct: 234 WLVGAKRVFDQMAVKKPVACTGLMVG 259
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 308 bits (789), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 164/413 (39%), Positives = 237/413 (57%), Gaps = 34/413 (8%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAH------------------------- 36
L+ Y++ G R AR +FD+MP+RD W M++
Sbjct: 910 LIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATS 969
Query: 37 --LINVGYVG-----AARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGS 89
LIN GY+G A LF+ MP +++ SWT++I G ++ EA+ VF +M ++G
Sbjct: 970 NCLIN-GYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGI 1028
Query: 90 KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYR 149
P+EVT+ V+ ACA LG LE GK VH + NGF+ +VY+ +AL+DMY KCG LE
Sbjct: 1029 IPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALL 1088
Query: 150 VFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGL 209
VF + ++ + W+S+I G A H M +KPN VTF+ V AC+H GL
Sbjct: 1089 VFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGL 1148
Query: 210 VDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALL 269
VD+GR + M DY IV VEHYG +V L S+AG + EA E+I NM PN V+WGALL
Sbjct: 1149 VDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALL 1208
Query: 270 GGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKK 329
GCR+HKN+V+AE A L L+ +N GYY ++ ++YAE +W +V+ IR M+ G++K
Sbjct: 1209 DGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEK 1268
Query: 330 T-PGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVV 381
PG SSI ID H F A D++H + + + +++ +M + GY+ +T V
Sbjct: 1269 ICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQETENV 1321
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 2/145 (1%)
Query: 25 RDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM 84
+D N I + + A + M + NV + ++ G C +L+++ M
Sbjct: 803 QDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRM 862
Query: 85 EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCL 144
+D P+ T +++ A + FG+S+ GF +V + LID Y G +
Sbjct: 863 LRDSVSPSSYTYSSLVKASSFAS--RFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRI 920
Query: 145 EEGYRVFEGMRERTVVSWSSMIVGF 169
E +VF+ M ER ++W++M+ +
Sbjct: 921 REARKVFDEMPERDDIAWTTMVSAY 945
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 304 bits (779), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 144/371 (38%), Positives = 224/371 (60%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++ +Y GE +A+ MFD+MP RD +MI G++ A +LF + ++ W
Sbjct: 164 MMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCW 223
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
T++I GL + +AL++F EM+ + NE T V VL AC+ LG LE G+ VH F +
Sbjct: 224 TAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVEN 283
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+ +V NALI+MY +CG + E RVF MR++ V+S+++MI G AMH
Sbjct: 284 QRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINE 343
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M+ G +PN VT + +L+ACSH GL+D G + M+R + + P +EHYGC+VDLL
Sbjct: 344 FRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLG 403
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
R GRLEEA I N+ + P+ ++ G LL C++H N+ L E+ + L + + + G YV+
Sbjct: 404 RVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVL 463
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
+SN+YA +GKW+E + IR M+ G++K PGCS+I +D +HEF+ GD HP + I++
Sbjct: 464 LSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQR 523
Query: 362 WEKLLVKMKMK 372
++L ++ K
Sbjct: 524 LQELNRILRFK 534
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 301 bits (772), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 149/367 (40%), Positives = 224/367 (61%), Gaps = 2/367 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMP--QRNVR 59
+L YA C E A +F+KMP+R+ +W+ M+ G + AR +F MP +NV
Sbjct: 222 MLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVV 281
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
+WT +I G A+ G+ +EA ++ +M G K + V+++L AC + G L G +H
Sbjct: 282 TWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSIL 341
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
K + N YV NAL+DMY KCG L++ + VF + ++ +VSW++M+ G +H
Sbjct: 342 KRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAI 401
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M R G++P+ VTFI VL +C+H GL+D+G M + Y +VP VEHYGCLVDL
Sbjct: 402 ELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDL 461
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY 299
L R GRL+EA +V+ M + PN V+WGALLG CR+H + +A+E + +L KLD + G Y
Sbjct: 462 LGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNY 521
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIF 359
++SN+YA A WE V+ IR MKS GV+K G SS+ ++ +HEF D++HP++ I+
Sbjct: 522 SLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIY 581
Query: 360 EMWEKLL 366
+M L+
Sbjct: 582 QMLGSLI 588
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 137/293 (46%), Gaps = 46/293 (15%)
Query: 2 LLHLYASCGE--TRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVR 59
L+ Y+ CG R A +F+KM +RD +WN M+ L+ G + AR LF MPQR++
Sbjct: 158 LIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLI 217
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
SW +++ G A+C +A ++F +M + N V+ +++ ++ GD+E + + F
Sbjct: 218 SWNTMLDGYARCREMSKAFELFEKMPER----NTVSWSTMVMGYSKAGDMEMARVM--FD 271
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
K +NV +I Y + G L+E R+ +
Sbjct: 272 KMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVD--------------------------- 304
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M+ G+K + I +L AC+ GL+ G + +I++R + L+D+
Sbjct: 305 ----QMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRS-NLGSNAYVLNALLDM 359
Query: 240 LSRAGRLEEAREVIANMSVPPNRVV-WGALLGGCRLHKNIVLAEEAMRHLSKL 291
++ G L++A +V + +P +V W +L G +H + +EA+ S++
Sbjct: 360 YAKCGNLKKAFDVFND--IPKKDLVSWNTMLHGLGVHGH---GKEAIELFSRM 407
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 12/226 (5%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGD 108
+F+ + + NV S+I A+ +A VFSEM++ G + T +L AC+
Sbjct: 73 VFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSW 132
Query: 109 LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCL--EEGYRVFEGMRERTVVSWSSMI 166
L K +H + G ++YV NALID Y +CG L + ++FE M ER VSW+SM+
Sbjct: 133 LPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSML 192
Query: 167 VGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGI 226
G M + + +++ +L + + K L M +
Sbjct: 193 GGLVKAGELRDARRLFDEMPQRDL----ISWNTMLDGYARCREMSKAFELFEKMPERNTV 248
Query: 227 VPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPP-NRVVWGALLGG 271
+ +V S+AG +E AR + M +P N V W ++ G
Sbjct: 249 -----SWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAG 289
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 296 bits (759), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 135/359 (37%), Positives = 221/359 (61%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +++ CG+ AR +FD + +R I +W MI+ G + +R LF M +++V W
Sbjct: 298 LMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLW 357
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I G + ++AL +F EM+ +KP+E+T++ L AC+QLG L+ G +HR+ +
Sbjct: 358 NAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEK 417
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
NV + +L+DMY KCG + E VF G++ R ++++++I G A+H
Sbjct: 418 YSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISY 477
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
MI G+ P+ +TFIG+L AC H G++ GR + M+ + + P ++HY +VDLL
Sbjct: 478 FNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLG 537
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RAG LEEA ++ +M + + VWGALL GCR+H N+ L E+A + L +LD + G YV+
Sbjct: 538 RAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVL 597
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFE 360
+ +Y EA WE+ R RR+M RGV+K PGCSSI ++G+V EF+ D++ P+++ I++
Sbjct: 598 LDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYD 656
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 141/310 (45%), Gaps = 64/310 (20%)
Query: 3 LHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWT 62
+H++ASCG+ +AR +FD+ P RD+ +WN +I
Sbjct: 198 IHMFASCGDMENARKVFDESPVRDLVSWNCLIN--------------------------- 230
Query: 63 SVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGN 122
G K G E+A+ V+ ME +G KP++VT++ ++ +C+ LGDL GK + + K N
Sbjct: 231 ----GYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN 286
Query: 123 GFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFA------------ 170
G + + NAL+DM+ KCG + E R+F+ + +RT+VSW++MI G+A
Sbjct: 287 GLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLF 346
Query: 171 -------------------MHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVD 211
M KP+ +T I L ACS +G +D
Sbjct: 347 DDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALD 406
Query: 212 KGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
G + + + Y + V LVD+ ++ G + EA V + N + + A++GG
Sbjct: 407 VGIWIHRYIEK-YSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQT-RNSLTYTAIIGG 464
Query: 272 CRLHKNIVLA 281
LH + A
Sbjct: 465 LALHGDASTA 474
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 105/233 (45%), Gaps = 5/233 (2%)
Query: 42 YVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDG---SKPNEVTVVA 98
Y+ + + + N+ SW I G ++ +E+ ++ +M + G S+P+ T
Sbjct: 102 YLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPV 161
Query: 99 VLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERT 158
+ CA L G + +V NA I M+ CG +E +VF+ R
Sbjct: 162 LFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRD 221
Query: 159 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT 218
+VSW+ +I G+ M G+KP+ VT IG++ +CS +G +++G+
Sbjct: 222 LVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYE 281
Query: 219 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
++ + G+ + L+D+ S+ G + EAR + N+ V W ++ G
Sbjct: 282 YVKEN-GLRMTIPLVNALMDMFSKCGDIHEARRIFDNLE-KRTIVSWTTMISG 332
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 289 bits (740), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/434 (36%), Positives = 247/434 (56%), Gaps = 7/434 (1%)
Query: 38 INVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVV 97
+ GY+ +AR F + ++ + SW+S+I G A+ G EA+ +F +++ S+ + +
Sbjct: 258 VKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALS 317
Query: 98 AVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER 157
+++ A L GK + A V N+++DMY+KCG ++E + F M+ +
Sbjct: 318 SIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLK 377
Query: 158 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL 217
V+SW+ +I G+ H M+R ++P+ V ++ VL ACSH G++ +G L
Sbjct: 378 DVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELF 437
Query: 218 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKN 277
+ + +GI P VEHY C+VDLL RAGRL+EA+ +I M + PN +W LL CR+H +
Sbjct: 438 SKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGD 497
Query: 278 IVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSIT 337
I L +E + L ++D N YV+MSN+Y +AG W E R L +G+KK G S +
Sbjct: 498 IELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVE 557
Query: 338 IDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMK-GYIPDTSVVLLDLEDAKQKEIFLY 396
I+ VH F +G+++HP I E ++ +++ + GY+ L D++D + KE L
Sbjct: 558 IEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDD-ESKEENLR 616
Query: 397 RHSEK----LALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRF 452
HSEK LAL G +N K G +IR+ KNLRVC DCH K +S+I VVRD RF
Sbjct: 617 AHSEKLAIGLALATGGLNQK-GKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRF 675
Query: 453 HCFKDGACTCKDYW 466
H F+DG C+C DYW
Sbjct: 676 HSFEDGCCSCGDYW 689
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 158/340 (46%), Gaps = 17/340 (5%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A +F SMP+RNV SW++++ G G + +L +FSEM + G PNE T L AC
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
L LE G +H F GF V V N+L+DMY KCG + E +VF + +R+++SW++M
Sbjct: 120 LNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAM 179
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMK--PNYVTFIGVLHACSHVGLVDKGRALLTIM-RR 222
I GF M +K P+ T +L ACS G++ G+ + + R
Sbjct: 180 IAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRS 239
Query: 223 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAE 282
+ G LVDL + G L AR+ + + W +L+ G V A
Sbjct: 240 GFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK-EKTMISWSSLILGYAQEGEFVEAM 298
Query: 283 EAMRHLSKLDLLNDGYYV-VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGV 341
+ L +L+ D + + + V+A+ + R + M++ VK G + ++ V
Sbjct: 299 GLFKRLQELNSQIDSFALSSIIGVFADFA----LLRQGKQMQALAVKLPSGLETSVLNSV 354
Query: 342 VHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVV 381
V ++ G+ + EK +M++K I T V+
Sbjct: 355 VDMYLKC--------GLVDEAEKCFAEMQLKDVISWTVVI 386
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 151/335 (45%), Gaps = 43/335 (12%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y+ CG A +F ++ R + +WN MIA ++ GY A D F M + N++
Sbjct: 148 LVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIK-- 205
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+P+E T+ ++L AC+ G + GK +H F
Sbjct: 206 ---------------------------ERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVR 238
Query: 122 NGF--LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
+GF + + +L+D+YVKCG L + F+ ++E+T++SWSS+I+G+A
Sbjct: 239 SGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAM 298
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEH--YGCLV 237
+ + + + ++ + L+ +G+ + + + + G+E +V
Sbjct: 299 GLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVK---LPSGLETSVLNSVV 355
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH----KNIVLAEEAMRHLSKLDL 293
D+ + G ++EA + A M + + + W ++ G H K++ + E +RH + D
Sbjct: 356 DMYLKCGLVDEAEKCFAEMQL-KDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDE 414
Query: 294 LNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVK 328
+ Y V+S E +L+++ G+K
Sbjct: 415 VC--YLAVLSACSHSGMIKEGEELFSKLLETHGIK 447
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 90/182 (49%), Gaps = 3/182 (1%)
Query: 91 PNE-VTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYR 149
PN+ +V++L C + G + G VH + +G N+ N LIDMY KC Y+
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 150 VFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGL 209
VF+ M ER VVSWS+++ G ++ M R G+ PN TF L AC +
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 210 VDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALL 269
++KG + + G VE LVD+ S+ GR+ EA +V + V + + W A++
Sbjct: 123 LEKGLQIHGFCLK-IGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMI 180
Query: 270 GG 271
G
Sbjct: 181 AG 182
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 88/180 (48%), Gaps = 5/180 (2%)
Query: 21 KMPQR-DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALK 79
K+P + + N ++ + G V A F+ M ++V SWT VI G K G+ +++++
Sbjct: 341 KLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVR 400
Query: 80 VFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSV-HRFAKGNGFLRNVYVCNALIDMY 138
+F EM + +P+EV +AVL AC+ G ++ G+ + + + +G V ++D+
Sbjct: 401 IFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLL 460
Query: 139 VKCGCLEEGYRVFEGMRERTVVS-WSSMIVGFAMHXXXXXXXXXXXXMIRVGMK--PNYV 195
+ G L+E + + M + V W +++ +H ++R+ K NYV
Sbjct: 461 GRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYV 520
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 288 bits (736), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 151/427 (35%), Positives = 236/427 (55%), Gaps = 2/427 (0%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + +A +F M ++NV SW S+I + G AL++F E+ P+ T+ ++L
Sbjct: 379 GQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASIL 438
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
A A+ L G+ +H + + + N + N+L+ MY CG LE+ + F + + VV
Sbjct: 439 PAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVV 498
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
SW+S+I+ +A+H MI + PN TF +L ACS G+VD+G M
Sbjct: 499 SWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESM 558
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
+R+YGI PG+EHYGC++DL+ R G A+ + M P +WG+LL R HK+I +
Sbjct: 559 KREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITI 618
Query: 281 AEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDG 340
AE A + K++ N G YV++ N+YAEAG+WE+V+RI+ LM+S+G+ +T S++ G
Sbjct: 619 AEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKG 678
Query: 341 VVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLED-AKQKEIFLYRHS 399
H F GD +H I+E+ + ++ +M + I V L E K + RHS
Sbjct: 679 KSHVFTNGDRSHVATNKIYEVLD-VVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHS 737
Query: 400 EKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGA 459
+LA +GLI+T+ G + + N R+C CH + S + REIVV D FH F +G
Sbjct: 738 VRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGR 797
Query: 460 CTCKDYW 466
C+C +YW
Sbjct: 798 CSCGNYW 804
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 109/225 (48%), Gaps = 1/225 (0%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A LF M + + W +I G CG+ EA++ +S M G K + T V+ + A
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
+ LE GK +H GF+ +VYVCN+LI +Y+K GC + +VFE M ER +VSW+SM
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
I G+ M++ G KP+ + + L ACSHV G+ + R
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
V ++D+ S+ G + A + M + N V W ++G
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMIG 306
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 153/324 (47%), Gaps = 15/324 (4%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ N +I+ + +G A +F MP+R++ SW S+I G G +L +F EM
Sbjct: 164 DVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEML 223
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA-KGNGFLRNVYVCNALIDMYVKCGCL 144
K G KP+ + ++ L AC+ + + GK +H A + +V V +++DMY K G +
Sbjct: 224 KCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEV 283
Query: 145 EEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI-RVGMKPNYVTFIGVLHA 203
R+F GM +R +V+W+ MI +A + M + G++P+ +T I +L A
Sbjct: 284 SYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA 343
Query: 204 CSHVGLVDKGRALL-TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR 262
+ + +GR + MRR G +P + L+D+ G+L+ A EVI + N
Sbjct: 344 SA----ILEGRTIHGYAMRR--GFLPHMVLETALIDMYGECGQLKSA-EVIFDRMAEKNV 396
Query: 263 VVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV-MSNVYAEAGKWEEVSRIRRL 321
+ W +++ + A E + L L+ D + + YAE+ E I
Sbjct: 397 ISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAY 456
Query: 322 MKSRGVKKTPGCSSITIDGVVHEF 345
+ VK ++I ++ +VH +
Sbjct: 457 I----VKSRYWSNTIILNSLVHMY 476
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 132/275 (48%), Gaps = 10/275 (3%)
Query: 4 HLYA-SCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWT 62
H+Y+ G+ H + ++ D+ ++ G V A +F+ M QRN+ +W
Sbjct: 243 HVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWN 302
Query: 63 SVIYGLAKCGMCEEALKVFSEM-EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+I A+ G +A F +M E++G +P+ +T + +L A A L G+++H +A
Sbjct: 303 VMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMR 358
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
GFL ++ + ALIDMY +CG L+ +F+ M E+ V+SW+S+I + +
Sbjct: 359 RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALEL 418
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT-IMRRDYGIVPGVEHYGCLVDLL 240
+ + P+ T +L A + + +GR + I++ Y + LV +
Sbjct: 419 FQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTII--LNSLVHMY 476
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
+ G LE+AR+ N + + V W +++ +H
Sbjct: 477 AMCGDLEDARKCF-NHILLKDVVSWNSIIMAYAVH 510
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 281 bits (719), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 211/353 (59%), Gaps = 2/353 (0%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
Y G AR +FD+MP RD+ +WN ++ N+G + A +F MP+RNV SW +I
Sbjct: 100 YIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLI 159
Query: 66 YGLAKCGMCEEALKVFSEMEKDGSK-PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGF 124
G A+ G E L F M +GS PN+ T+ VL ACA+LG +FGK VH++ + G+
Sbjct: 160 KGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGY 219
Query: 125 LR-NVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXX 183
+ +V V NALIDMY KCG +E VF+G++ R ++SW++MI G A H
Sbjct: 220 NKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFH 279
Query: 184 XMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRA 243
M G+ P+ VTF+GVL AC H+GLV+ G A M D+ I+P +EH GC+VDLLSRA
Sbjct: 280 EMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRA 339
Query: 244 GRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMS 303
G L +A E I M V + V+W LLG +++K + + E A+ L KL+ N +V++S
Sbjct: 340 GFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLS 399
Query: 304 NVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAK 356
N+Y +AG++++ +R++ M+ G KK G S I D + +F + E HP+ +
Sbjct: 400 NIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTE 452
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 22/243 (9%)
Query: 40 VGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAV 99
+G + +A +F M ++NV WTS+I G A + F D S ++ +
Sbjct: 41 MGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYF-----DLSPERDIVLWNT 95
Query: 100 LVACAQLGDLEFGKSVH-RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERT 158
+++ G +E G + R R+V N +++ Y G +E RVF+ M ER
Sbjct: 96 MIS----GYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERN 151
Query: 159 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG-MKPNYVTFIGVLHACSHVGLVDKGRALL 217
V SW+ +I G+A + M+ G + PN T VL AC+ +G D G+ +
Sbjct: 152 VFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWV- 210
Query: 218 TIMRRDYGIVPG-----VEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGC 272
YG G V L+D+ + G +E A EV + + + W ++ G
Sbjct: 211 ----HKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIK-RRDLISWNTMINGL 265
Query: 273 RLH 275
H
Sbjct: 266 AAH 268
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 147/373 (39%), Positives = 215/373 (57%), Gaps = 7/373 (1%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+DI N I+ +AR LF M R SWT +I G A+ G +EAL +F
Sbjct: 288 DQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHA 347
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLR-NVYVCNALIDMYVKCG 142
M K G KP+ VT+++++ C + G LE GK + A G R NV +CNALIDMY KCG
Sbjct: 348 MIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCG 407
Query: 143 CLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLH 202
+ E +F+ E+TVV+W++MI G+A++ MI + KPN++TF+ VL
Sbjct: 408 SIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQ 467
Query: 203 ACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR 262
AC+H G ++KG IM++ Y I PG++HY C+VDLL R G+LEEA E+I NMS P+
Sbjct: 468 ACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDA 527
Query: 263 VVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLM 322
+WGALL C++H+N+ +AE+A L L+ YV M+N+YA AG W+ +RIR +M
Sbjct: 528 GIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIM 587
Query: 323 KSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVL 382
K R +KK PG S I ++G H F G+ H + + I+ L + + D V+
Sbjct: 588 KQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGLSL------FAKDKHVLY 641
Query: 383 LDLEDAKQKEIFL 395
D+ + E+F+
Sbjct: 642 KDVYKEQSYELFI 654
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 7/266 (2%)
Query: 9 CGETRHARLMFDKMP-QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYG 67
C E HA L+ K P D+ + + V A +F MP+R+ +W +++ G
Sbjct: 70 CCEMVHAHLI--KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSG 127
Query: 68 LAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRN 127
+ G ++A +F EM + P+ VTV+ ++ + + L+ +++H G
Sbjct: 128 FCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQ 187
Query: 128 VYVCNALIDMYVKCGCLEEGYRVFEGMR--ERTVVSWSSMIVGFAMHXXXXXXXXXXXXM 185
V V N I Y KCG L+ VFE + +RTVVSW+SM +++ M
Sbjct: 188 VTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLM 247
Query: 186 IRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGR 245
+R KP+ TFI + +C + + +GR L+ G +E + + S++
Sbjct: 248 LREEFKPDLSTFINLAASCQNPETLTQGR-LIHSHAIHLGTDQDIEAINTFISMYSKSED 306
Query: 246 LEEAREVIANMSVPPNRVVWGALLGG 271
AR ++ ++ V W ++ G
Sbjct: 307 TCSAR-LLFDIMTSRTCVSWTVMISG 331
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 76 EALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALI 135
E+L +F EM++ G +PN T V ACA+L D+ + VH + F +V+V A +
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 94
Query: 136 DMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYV 195
DM+VKC ++ +VFE M ER +W++M+ GF M + P+ V
Sbjct: 95 DMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSV 154
Query: 196 TFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVE 231
T + ++ + S +K LL M GI GV+
Sbjct: 155 TVMTLIQSAS----FEKSLKLLEAMHA-VGIRLGVD 185
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 140/343 (40%), Positives = 203/343 (59%), Gaps = 1/343 (0%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + A ++F + +R++ SW S+I A+ A+ +F +M G + V++ A L
Sbjct: 490 GRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAAL 549
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
ACA L FGK++H F + +VY + LIDMY KCG L+ VF+ M+E+ +V
Sbjct: 550 SACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIV 609
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMI-RVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
SW+S+I H M+ + G++P+ +TF+ ++ +C HVG VD+G
Sbjct: 610 SWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRS 669
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIV 279
M DYGI P EHY C+VDL RAGRL EA E + +M PP+ VWG LLG CRLHKN+
Sbjct: 670 MTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVE 729
Query: 280 LAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITID 339
LAE A L LD N GYYV++SN +A A +WE V+++R LMK R V+K PG S I I+
Sbjct: 730 LAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEIN 789
Query: 340 GVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVL 382
H FV+GD HP++ I+ + LL +++++GYIP + L
Sbjct: 790 KRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQPYLPL 832
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 121/262 (46%), Gaps = 10/262 (3%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N +++ G A LF M + + +W +I G + G+ EE+L F EM G
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
P+ +T ++L + ++ +LE+ K +H + + ++++ +ALID Y KC + +
Sbjct: 338 PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNI 397
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
F VV +++MI G+ + +++V + PN +T + +L + +
Sbjct: 398 FSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLAL 457
Query: 211 DKGRALLTIMRRDYGIVPGVE---HYGC-LVDLLSRAGRLEEAREVIANMSVPPNRVVWG 266
GR L + I G + + GC ++D+ ++ GR+ A E+ +S + V W
Sbjct: 458 KLGREL-----HGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWN 511
Query: 267 ALLGGCRLHKNIVLAEEAMRHL 288
+++ C N A + R +
Sbjct: 512 SMITRCAQSDNPSAAIDIFRQM 533
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%)
Query: 33 MIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPN 92
+I + G + LF + Q++ W ++ G AKCG + +K FS M D PN
Sbjct: 179 LIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPN 238
Query: 93 EVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE 152
VT VL CA ++ G +H +G + N+L+ MY KCG ++ ++F
Sbjct: 239 AVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFR 298
Query: 153 GMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
M V+W+ MI G+ MI G+ P+ +TF +L + S
Sbjct: 299 MMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 102/221 (46%), Gaps = 10/221 (4%)
Query: 55 QRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKS 114
+ ++R W S+I + G+ +AL + +M G P+ T ++ AC L + +
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDF 159
Query: 115 VHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXX 174
+ G N +V ++LI Y++ G ++ ++F+ + ++ V W+ M+ G+A
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGA 219
Query: 175 XXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYG 234
M + PN VTF VL C+ L+D G L ++ +V GV+ G
Sbjct: 220 LDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLV-----VVSGVDFEG 274
Query: 235 ----CLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
L+ + S+ GR ++A ++ MS + V W ++ G
Sbjct: 275 SIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVTWNCMISG 314
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 70/133 (52%), Gaps = 6/133 (4%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM- 84
D+ + + +I G + AA ++F +M ++N+ SW S+I G +++L +F EM
Sbjct: 576 DVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMV 635
Query: 85 EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK---GNGFLRNVYVCNALIDMYVKC 141
EK G +P+++T + ++ +C +GD++ G R G + Y C ++D++ +
Sbjct: 636 EKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYAC--VVDLFGRA 693
Query: 142 GCLEEGYRVFEGM 154
G L E Y + M
Sbjct: 694 GRLTEAYETVKSM 706
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 277 bits (709), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 147/364 (40%), Positives = 211/364 (57%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
+LH+Y +CG A +F M D+ WN MI G + A++LF MPQRN SW
Sbjct: 167 MLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSW 226
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
S+I G + G ++AL +F EM++ KP+ T+V++L ACA LG E G+ +H +
Sbjct: 227 NSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVR 286
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
N F N V ALIDMY KCGC+EEG VFE ++ + W+SMI+G A +
Sbjct: 287 NRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDL 346
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
+ R G++P+ V+FIGVL AC+H G V + +M+ Y I P ++HY +V++L
Sbjct: 347 FSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLG 406
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
AG LEEA +I NM V + V+W +LL CR N+ +A+ A + L KLD YV+
Sbjct: 407 GAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVL 466
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
+SN YA G +EE R LMK R ++K GCSSI +D VHEF++ THP++ I+ +
Sbjct: 467 LSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSL 526
Query: 362 WEKL 365
+ L
Sbjct: 527 LDIL 530
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 137/316 (43%), Gaps = 46/316 (14%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM--EKDGSKPNEVTVVAVLVACAQL 106
+F+ + +N W ++I G ++ E A+ +F +M KP +T +V A +L
Sbjct: 80 VFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRL 139
Query: 107 GDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMI 166
G G+ +H G + ++ N ++ MYV CGCL E +R+F GM VV+W+SMI
Sbjct: 140 GQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMI 199
Query: 167 VGFAMHXXXXXXXXXXXXM---------------IRVG----------------MKPNYV 195
+GFA M +R G +KP+
Sbjct: 200 MGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGF 259
Query: 196 TFIGVLHACSHVGLVDKGRALLT-IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIA 254
T + +L+AC+++G ++GR + I+R + + V L+D+ + G +EE V
Sbjct: 260 TMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIV--VTALIDMYCKCGCIEEGLNVFE 317
Query: 255 NMSVPPNRV-VWGALLGGCRLHKNIVLAEEAMRHLSKLD---LLNDGY-YVVMSNVYAEA 309
P ++ W +++ G N E AM S+L+ L D ++ + A +
Sbjct: 318 --CAPKKQLSCWNSMILGL---ANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHS 372
Query: 310 GKWEEVSRIRRLMKSR 325
G+ RLMK +
Sbjct: 373 GEVHRADEFFRLMKEK 388
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 273 bits (697), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 135/370 (36%), Positives = 219/370 (59%), Gaps = 3/370 (0%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
+ G+ AR +FD+M + + TW MI N+ + AAR LF +MP+RN+ SW ++I
Sbjct: 186 FVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMI 245
Query: 66 YGLAKCGMCEEALKVFSEMEKDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGF 124
G + +E +++F EM+ S P++VT+++VL A + G L G+ H F +
Sbjct: 246 GGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKL 305
Query: 125 LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXX 184
+ V VC A++DMY KCG +E+ R+F+ M E+ V SW++MI G+A++
Sbjct: 306 DKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVT 365
Query: 185 MIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAG 244
M+ + KP+ +T + V+ AC+H GLV++GR +MR + G+ +EHYGC+VDLL RAG
Sbjct: 366 MM-IEEKPDEITMLAVITACNHGGLVEEGRKWFHVMR-EMGLNAKIEHYGCMVDLLGRAG 423
Query: 245 RLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSN 304
L+EA ++I NM PN ++ + L C +K+I AE ++ +L+ NDG YV++ N
Sbjct: 424 SLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRN 483
Query: 305 VYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEK 364
+YA +W++ ++ +M+ KK GCS I I+ +V EF++GD THP + I +
Sbjct: 484 LYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGD 543
Query: 365 LLVKMKMKGY 374
LL+ M + Y
Sbjct: 544 LLMHMNEEKY 553
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 112/247 (45%), Gaps = 28/247 (11%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVV--- 97
G +G AR+ F MP R+ SWT++I G +CG + A K+F +M P+ VV
Sbjct: 127 GKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQM------PHVKDVVIYN 180
Query: 98 AVLVACAQLGDLE-----FGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE 152
A++ + GD+ F + H + V +I Y ++ ++F+
Sbjct: 181 AMMDGFVKSGDMTSARRLFDEMTH---------KTVITWTTMIHGYCNIKDIDAARKLFD 231
Query: 153 GMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM-IRVGMKPNYVTFIGVLHACSHVGLVD 211
M ER +VSW++MI G+ + M + P+ VT + VL A S G +
Sbjct: 232 AMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALS 291
Query: 212 KGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV-WGALLG 270
G ++R + V+ ++D+ S+ G +E+A+ + M P +V W A++
Sbjct: 292 LGEWCHCFVQRK-KLDKKVKVCTAILDMYSKCGEIEKAKRIFDEM--PEKQVASWNAMIH 348
Query: 271 GCRLHKN 277
G L+ N
Sbjct: 349 GYALNGN 355
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 32/153 (20%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
+L +Y+ CGE A+ +FD+MP++ +A+WN MI G AA DLF +M
Sbjct: 315 ILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTM-------- 366
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
M EE KP+E+T++AV+ AC G +E G+ +
Sbjct: 367 -----------MIEE-------------KPDEITMLAVITACNHGGLVEEGRKWFHVMRE 402
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM 154
G + ++D+ + G L+E + M
Sbjct: 403 MGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNM 435
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 5/140 (3%)
Query: 32 IMIAHLINVGYVGAARDLFSSMPQRNVRSWT-SVIYGLAKCGMCEEALKVFSEMEKDGS- 89
++ A + +GY AR LF PQR+ + S+I + ++ ++ ++ K+
Sbjct: 18 VISASAVGIGY---ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCF 74
Query: 90 KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYR 149
P+ T + +C+ + G +H GF ++YV ++DMY K G +
Sbjct: 75 APDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARN 134
Query: 150 VFEGMRERTVVSWSSMIVGF 169
F+ M R+ VSW+++I G+
Sbjct: 135 AFDEMPHRSEVSWTALISGY 154
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 271 bits (694), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 138/359 (38%), Positives = 213/359 (59%), Gaps = 8/359 (2%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
YA G+ A +FD+MP +D WN+MI + + +AR+LF +++V +W ++I
Sbjct: 188 YAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMI 247
Query: 66 YGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA-KGNGF 124
G CG +EAL +F EM G P+ VT++++L ACA LGDLE GK +H + +
Sbjct: 248 SGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASV 307
Query: 125 LRNVYV----CNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
++YV NALIDMY KCG ++ VF G+++R + +W+++IVG A+H
Sbjct: 308 SSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEGSIEM 367
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M R+ + PN VTFIGV+ ACSH G VD+GR ++MR Y I P ++HYGC+VD+L
Sbjct: 368 FEE-MQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDML 426
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYV 300
RAG+LEEA + +M + PN +VW LLG C+++ N+ L + A L + G YV
Sbjct: 427 GRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYV 486
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDG--VVHEFVAGDETHPQAKG 357
++SN+YA G+W+ V ++R++ VKK G S I D ++ ++ E +++G
Sbjct: 487 LLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDDDKLMMRYLLSSEPESRSRG 545
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 70/139 (50%)
Query: 32 IMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKP 91
I A L G + A LF +P+ +V V+ G A+ E+ + +++EMEK G P
Sbjct: 51 IYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSP 110
Query: 92 NEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVF 151
+ T VL AC++L G + H +GF+ N YV NALI + CG L +F
Sbjct: 111 DRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELF 170
Query: 152 EGMRERTVVSWSSMIVGFA 170
+ + V+WSSM G+A
Sbjct: 171 DDSAKAHKVAWSSMTSGYA 189
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 113/264 (42%), Gaps = 49/264 (18%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N +I N G +G A +LF + + +W+S+ G AK G +EA+++F EM
Sbjct: 151 NALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEM----PY 206
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSV-HRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYR 149
++V ++ C + +++ + + RF + ++V NA+I YV CG +E
Sbjct: 207 KDQVAWNVMITGCLKCKEMDSARELFDRFTE-----KDVVTWNAMISGYVNCGYPKEALG 261
Query: 150 VFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGL 209
+F+ MR+ G P+ VT + +L AC+ +G
Sbjct: 262 IFKEMRD-------------------------------AGEHPDVVTILSLLSACAVLGD 290
Query: 210 VDKGRAL----LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
++ G+ L L I G + L+D+ ++ G ++ A EV + + W
Sbjct: 291 LETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVK-DRDLSTW 349
Query: 266 GALLGGCRLHK---NIVLAEEAMR 286
L+ G LH +I + EE R
Sbjct: 350 NTLIVGLALHHAEGSIEMFEEMQR 373
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 271 bits (693), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 138/341 (40%), Positives = 200/341 (58%), Gaps = 1/341 (0%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
Y G A+ +FD MP+RD+ TW MI +G+V A+ LF MP R+V ++ S++
Sbjct: 262 YVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMM 321
Query: 66 YGLAKCGMCEEALKVFSEMEKDGSK-PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGF 124
G + EAL++FS+MEK+ P++ T+V VL A AQLG L +H + F
Sbjct: 322 AGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQF 381
Query: 125 LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXX 184
+ ALIDMY KCG ++ VFEG+ +++ W++MI G A+H
Sbjct: 382 YLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQ 441
Query: 185 MIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAG 244
+ R+ +KP+ +TF+GVL+ACSH GLV +G +MRR + I P ++HYGC+VD+LSR+G
Sbjct: 442 IERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSG 501
Query: 245 RLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSN 304
+E A+ +I M V PN V+W L C HK E +HL N YV++SN
Sbjct: 502 SIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSN 561
Query: 305 VYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEF 345
+YA G W++V R+R +MK R ++K PGCS I +DG VHEF
Sbjct: 562 MYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEF 602
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 156/324 (48%), Gaps = 27/324 (8%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMP--QRNVR 59
L+ LY CG +R MFD+MP+RD ++N MI + G + +AR+LF MP +N+
Sbjct: 162 LIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLI 221
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
SW S+I G A+ + + + S++ D + + ++ +++ + G +E K +
Sbjct: 222 SWNSMISGYAQ---TSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVM 278
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
R+V +ID Y K G + +F+ M R VV+++SM+ G+ +
Sbjct: 279 PR----RDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEAL 334
Query: 180 XXXXXMIRVG-MKPNYVTFIGVLHACSHVGLVDKGRAL-LTIMRRDYGIVPGVEHYGCLV 237
M + + P+ T + VL A + +G + K + L I+ + + + G + L+
Sbjct: 335 EIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYL--GGKLGVALI 392
Query: 238 DLLSRAGRLEEAR---EVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLL 294
D+ S+ G ++ A E I N S+ W A++GG +H L E A L +++ L
Sbjct: 393 DMYSKCGSIQHAMLVFEGIENKSIDH----WNAMIGGLAIHG---LGESAFDMLLQIERL 445
Query: 295 ----NDGYYVVMSNVYAEAGKWEE 314
+D +V + N + +G +E
Sbjct: 446 SLKPDDITFVGVLNACSHSGLVKE 469
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 64/109 (58%)
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
W +VI + +AL + M ++G ++ ++ VL AC++LG ++ G +H F K
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLK 148
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGF 169
G ++++ N LI +Y+KCGCL ++F+ M +R VS++SMI G+
Sbjct: 149 KTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGY 197
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 149/413 (36%), Positives = 228/413 (55%), Gaps = 40/413 (9%)
Query: 28 ATWNIMIAHLINV----GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
AT+ ++ L+++ G + +A +F M +++V SWT+++ G G +EALK+F
Sbjct: 361 ATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCN 420
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M G P+++ +VL A A+L LEFG+ VH +GF ++ V N+L+ MY KCG
Sbjct: 421 MRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGS 480
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
LE+ +F M R +++W+ +IVG+A +
Sbjct: 481 LEDANVIFNSMEIRDLITWTCLIVGYAKN------------------------------- 509
Query: 204 CSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRV 263
GL++ + MR YGI PG EHY C++DL R+G + +++ M V P+
Sbjct: 510 ----GLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDAT 565
Query: 264 VWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMK 323
VW A+L R H NI E A + L +L+ N YV +SN+Y+ AG+ +E + +RRLMK
Sbjct: 566 VWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMK 625
Query: 324 SRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLL 383
SR + K PGCS + G VH F++ D HP+ I+ +++++ +K GY D S L
Sbjct: 626 SRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFALH 685
Query: 384 DLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLV 436
DL D + KE+ L HSEKLA+ +GL+ G IRI+KNLRVC DCH+A KL+
Sbjct: 686 DL-DKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSAMKLL 737
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 92/273 (33%), Positives = 135/273 (49%), Gaps = 3/273 (1%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS 60
+LL + G AR MFDKMP+RD TWN MI N + A LF S P +N S
Sbjct: 33 LLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTIS 92
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
W ++I G K G EA +F EM+ DG KPNE T+ +VL C L L G+ +H
Sbjct: 93 WNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTI 152
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMHXXXXXXX 179
GF +V V N L+ MY +C + E +FE M E+ V+W+SM+ G++ +
Sbjct: 153 KTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAI 212
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
+ R G + N TF VL AC+ V G + + + G + L+D+
Sbjct: 213 ECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS-GFKTNIYVQSALIDM 271
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGC 272
++ +E AR ++ M V + V W +++ GC
Sbjct: 272 YAKCREMESARALLEGMEV-DDVVSWNSMIVGC 303
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 136/286 (47%), Gaps = 13/286 (4%)
Query: 45 AARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACA 104
+AR L M +V SW S+I G + G+ EAL +F M + K ++ T+ ++L C
Sbjct: 280 SARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSIL-NCF 338
Query: 105 QLG--DLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
L +++ S H G+ V NAL+DMY K G ++ +VFEGM E+ V+SW
Sbjct: 339 ALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISW 398
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR 222
++++ G + M G+ P+ + VL A + + L++ G+ + +
Sbjct: 399 TALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIK 458
Query: 223 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAE 282
G + LV + ++ G LE+A + +M + + + W L+ G KN +L E
Sbjct: 459 S-GFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEI-RDLITWTCLIVG--YAKNGLL-E 513
Query: 283 EAMRHLSKLDLL-----NDGYYVVMSNVYAEAGKWEEVSRIRRLMK 323
+A R+ + + +Y M +++ +G + +V ++ M+
Sbjct: 514 DAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQME 559
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 156/425 (36%), Positives = 229/425 (53%), Gaps = 11/425 (2%)
Query: 49 LFSSMPQ-RNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLG 107
LF M R++ +W +I A E A+ +F ++ ++ P+ T +VL ACA L
Sbjct: 325 LFMEMSHCRDIVAWNGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLV 383
Query: 108 DLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIV 167
S+H GFL + + N+LI Y KCG L+ RVF+ M R VVSW+SM+
Sbjct: 384 TARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLK 443
Query: 168 GFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIV 227
+++H M + P+ TFI +L ACSH G V++G + M +
Sbjct: 444 AYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETL 500
Query: 228 PGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRH 287
P + HY C++D+LSRA R EA EVI M + P+ VVW ALLG CR H N L + A
Sbjct: 501 PQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADK 560
Query: 288 LSKL-DLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFV 346
L +L + N Y+ MSN+Y G + E + + M++ V+K P S I VHEF
Sbjct: 561 LKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFA 620
Query: 347 AGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVY 406
+G P + ++ ++L+ +K GY+P+ D+ED +Q+E L HSEKLAL +
Sbjct: 621 SGGRHRPDKEAVYRELKRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAF 680
Query: 407 GLINTKPGMS-----IRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACT 461
++ + I+IMKN R+C DCH KL S++ +EI++RD NRFH FKD +C+
Sbjct: 681 AVMEGRKSSDCGVNLIQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCS 740
Query: 462 CKDYW 466
C DYW
Sbjct: 741 CNDYW 745
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 88/177 (49%), Gaps = 17/177 (9%)
Query: 5 LYASCGETR---------HARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQ 55
L+ +C E R H L +++ N +I G + AR +F +MP+
Sbjct: 65 LFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPE 124
Query: 56 RNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSV 115
RNV SWT++I G + G +E +FS M PNE T+ +VL +C E GK V
Sbjct: 125 RNVVSWTALITGYVQAGNEQEGFCLFSSMLSH-CFPNEFTLSSVLTSC----RYEPGKQV 179
Query: 116 HRFAKGNGFLRNVYVCNALIDMYVKC---GCLEEGYRVFEGMRERTVVSWSSMIVGF 169
H A G ++YV NA+I MY +C E + VFE ++ + +V+W+SMI F
Sbjct: 180 HGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAF 236
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 23/290 (7%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A +F ++ +N+ +W S+I C + ++A+ VF M DG + T++ + + +
Sbjct: 214 AWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYK 273
Query: 106 LGDL---EFGK---SVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE---EGYRVFEGMRE 156
DL E K +H +G + V ALI +Y + LE + Y++F M
Sbjct: 274 SSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSE--MLEDYTDCYKLFMEMSH 331
Query: 157 -RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRA 215
R +V+W+ +I FA++ + + + P++ TF VL AC+ GLV R
Sbjct: 332 CRDIVAWNGIITAFAVY-DPERAIHLFGQLRQEKLSPDWYTFSSVLKACA--GLV-TARH 387
Query: 216 LLTIMRR--DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCR 273
L+I + G + L+ ++ G L+ V +M + V W ++L
Sbjct: 388 ALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMD-SRDVVSWNSMLKAYS 446
Query: 274 LHKNIVLAEEAMRHLSKLDLLND-GYYVVMSNVYAEAGKWEEVSRIRRLM 322
LH + + + K+D+ D ++ + + + AG+ EE RI R M
Sbjct: 447 LHGQV---DSILPVFQKMDINPDSATFIALLSACSHAGRVEEGLRIFRSM 493
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 13/180 (7%)
Query: 33 MIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPN 92
MI L + + R S +P R + + L + G A+ +F S P
Sbjct: 1 MITSLSQISFGTLRRFGSSVLPSALKREFVEGLRTLVRSGDIRRAVSLFY------SAPV 54
Query: 93 EV----TVVAVLVACAQLGDLEFGKSVHRFAKGNGFL--RNVYVCNALIDMYVKCGCLEE 146
E+ A+ ACA+ +L G ++H + + +NV + N LI+MY KCG +
Sbjct: 55 ELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILY 114
Query: 147 GYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSH 206
+VF+ M ER VVSW+++I G+ M+ PN T VL +C +
Sbjct: 115 ARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCRY 173
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 266 bits (680), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 200/340 (58%), Gaps = 5/340 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y+ A +FD+ PQRD+ T+N++I L+ + AR+LF SMP R++ SW
Sbjct: 158 LIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSW 217
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
S+I G A+ C EA+K+F EM G KP+ V +V+ L ACAQ GD + GK++H + K
Sbjct: 218 NSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKR 277
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+ ++ L+D Y KCG ++ +FE ++T+ +W++MI G AMH
Sbjct: 278 KRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDY 337
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M+ G+KP+ VTFI VL CSH GLVD+ R L MR Y + ++HYGC+ DLL
Sbjct: 338 FRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLG 397
Query: 242 RAGRLEEAREVIANMSVP-PNR---VVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG 297
RAG +EEA E+I M NR + W LLGGCR+H NI +AE+A + L + G
Sbjct: 398 RAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGG 457
Query: 298 YYVVMSNVYAEAGKWEEVSRIRRLM-KSRGVKKTPGCSSI 336
Y VM +YA A +WEEV ++R ++ + + VKK G S +
Sbjct: 458 VYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/335 (39%), Positives = 198/335 (59%), Gaps = 1/335 (0%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A+ +F MP RNV +WT++I G + ++ + VF EM K PNE T+ +VL ACA
Sbjct: 259 AQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAH 318
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
+G L G+ VH + N N LID+YVKCGCLEE VFE + E+ V +W++M
Sbjct: 319 VGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAM 378
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
I GFA H M+ + PN VTF+ VL AC+H GLV++GR L M+ +
Sbjct: 379 INGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFN 438
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
+ P +HY C+VDL R G LEEA+ +I M + P VVWGAL G C LHK+ L + A
Sbjct: 439 MEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAA 498
Query: 286 RHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEF 345
+ KL + G Y +++N+Y+E+ W+EV+R+R+ MK + V K+PG S I + G + EF
Sbjct: 499 SRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEF 558
Query: 346 VAGDETHP-QAKGIFEMWEKLLVKMKMKGYIPDTS 379
+A D+ P ++ +++ + + V+M++ + D +
Sbjct: 559 IAFDDKKPLESDDLYKTLDTVGVQMRLPDELEDVT 593
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 128/246 (52%), Gaps = 3/246 (1%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N +I+ + G A LF ++V +WT++I G + G EA+ F EM+K G
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVA 201
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLR-NVYVCNALIDMYVKCGCLEEGYR 149
NE+TVV+VL A ++ D+ FG+SVH G ++ +V++ ++L+DMY KC C ++ +
Sbjct: 202 ANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQK 261
Query: 150 VFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGL 209
VF+ M R VV+W+++I G+ M++ + PN T VL AC+HVG
Sbjct: 262 VFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGA 321
Query: 210 VDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALL 269
+ +GR + M ++ I L+DL + G LEEA V + N W A++
Sbjct: 322 LHRGRRVHCYMIKN-SIEINTTAGTTLIDLYVKCGCLEEAILVFERLH-EKNVYTWTAMI 379
Query: 270 GGCRLH 275
G H
Sbjct: 380 NGFAAH 385
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 10/231 (4%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALK--VFSEMEKDGSKPNEVTVVAVLVAC 103
AR L + +++ W S+I + L + M ++G P+ T +L A
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAV 114
Query: 104 AQLGD---LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
+L D +F + +F G + +V N+LI Y G + R+F+G ++ VV
Sbjct: 115 FKLRDSNPFQFHAHIVKF----GLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVV 170
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
+W++MI GF + M + G+ N +T + VL A V V GR++ +
Sbjct: 171 TWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLY 230
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ V LVD+ + ++A++V M N V W AL+ G
Sbjct: 231 LETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP-SRNVVTWTALIAG 280
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 142/397 (35%), Positives = 220/397 (55%), Gaps = 21/397 (5%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ ++ CG AR +FD M +++ W M+ ++ G + AR LF P ++V W
Sbjct: 188 LVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLW 247
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
T+++ G + +EAL++F M+ G +P+ +V++L CAQ G LE GK +H +
Sbjct: 248 TAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINE 307
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
N + V AL+DMY KCGC+E VF ++ER SW+S+I G AM+
Sbjct: 308 NRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDL 367
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M VG++ + +TF+ VL AC+H G V +GR + M + + P EH CL+DLL
Sbjct: 368 YYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLC 427
Query: 242 RAGRLEEAREVIANMSVPPNRV---VWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY 298
RAG L+EA E+I M + V+ +LL R + N+ +AE L K+++ +
Sbjct: 428 RAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSA 487
Query: 299 YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDE--THPQAK 356
+ ++++VYA A +WE+V+ +RR MK G++K PGCSSI IDGV HEF+ GD+ +HP+
Sbjct: 488 HTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMD 547
Query: 357 GIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEI 393
I M + T+ ++LDLE KEI
Sbjct: 548 EINSMLHQ-------------TTNLMLDLE---HKEI 568
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 127/277 (45%), Gaps = 35/277 (12%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGS- 89
N ++ ++G + +F MPQR+V SW +I G E+A+ VF M ++ +
Sbjct: 85 NSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNL 144
Query: 90 KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYR 149
K +E T+V+ L AC+ L +LE G+ ++RF F +V + NAL+DM+ KCGCL++
Sbjct: 145 KFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARA 203
Query: 150 VFEGMRERTVVSWSSMIV-------------------------------GFAMHXXXXXX 178
VF+ MR++ V W+SM+ G+
Sbjct: 204 VFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEA 263
Query: 179 XXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVD 238
M G++P+ + +L C+ G +++G+ + + + V V LVD
Sbjct: 264 LELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTA-LVD 322
Query: 239 LLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
+ ++ G +E A EV + + W +L+ G ++
Sbjct: 323 MYAKCGCIETALEVFYEIK-ERDTASWTSLIYGLAMN 358
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 123/269 (45%), Gaps = 7/269 (2%)
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
+ ++ LA + L +F E+ G P+ T+ VL + +L + G+ VH +A
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
G + YV N+L+ MY G +E ++VF+ M +R VVSW+ +I + +
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133
Query: 181 XXXXMIR-VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M + +K + T + L ACS + ++ G + + ++ + V LVD+
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEM--SVRIGNALVDM 191
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY 299
+ G L++AR V +M N W +++ G I +EA + + + +
Sbjct: 192 FCKCGCLDKARAVFDSMR-DKNVKCWTSMVFGYVSTGRI---DEARVLFERSPVKDVVLW 247
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVK 328
M N Y + +++E + R M++ G++
Sbjct: 248 TAMMNGYVQFNRFDEALELFRCMQTAGIR 276
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 261 bits (668), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 145/380 (38%), Positives = 222/380 (58%), Gaps = 14/380 (3%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL +Y C E+ A+ FD M ++D+ +WN M+ + +G + AA+ +F MP+R++ SW
Sbjct: 275 LLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSW 334
Query: 62 TSVIYGLAKCGMCEEALK-VFSEME-KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
S+++G +K G + ++ +F EM + KP+ VT+V+++ A G+L G+ VH
Sbjct: 335 NSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLV 394
Query: 120 -----KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXX 174
KG+ FL +ALIDMY KCG +E + VF+ E+ V W+SMI G A H
Sbjct: 395 IRLQLKGDAFL-----SSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGN 449
Query: 175 XXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYG 234
M G+ PN VT + VL ACSH GLV++G + M+ +G P EHYG
Sbjct: 450 GQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYG 509
Query: 235 CLVDLLSRAGRLEEAREVIA-NMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDL 293
LVDLL RAGR+EEA++++ M + P++ +WG++L CR ++I AE A+ L KL+
Sbjct: 510 SLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEP 569
Query: 294 LNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGD-ETH 352
+G YV++SN+YA G+W + R M++RGVKKT G SS+ +H FVA + + H
Sbjct: 570 EKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNH 629
Query: 353 PQAKGIFEMWEKLLVKMKMK 372
P+ I + + L +MK K
Sbjct: 630 PRWTEIKRILQHLYNEMKPK 649
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 49/289 (16%)
Query: 30 WNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGS 89
WN ++ + +G G A +F+ MP +V S+ +I G AK G EALK++ +M DG
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGI 228
Query: 90 KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNG--FLRNVYVCNALIDMYVKC------ 141
+P+E TV+++LV C L D+ GK VH + + G + N+ + NAL+DMY KC
Sbjct: 229 EPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLA 288
Query: 142 -------------------------GCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXX 176
G +E VF+ M +R +VSW+S++ G++
Sbjct: 289 KRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQ 348
Query: 177 XXXXXXXXMIRV--GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYG 234
+ + +KP+ VT + ++ ++ G + GR + +G+V ++ G
Sbjct: 349 RTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWV-------HGLVIRLQLKG 401
Query: 235 ------CLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKN 277
L+D+ + G +E A V + + +W +++ G H N
Sbjct: 402 DAFLSSALIDMYCKCGIIERAFMVFKT-ATEKDVALWTSMITGLAFHGN 449
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 261 bits (667), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 137/337 (40%), Positives = 202/337 (59%), Gaps = 2/337 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++ LY S G A+ +FD+M +R++ WN+MI + G V LF M +R++ SW
Sbjct: 143 VVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSW 202
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
S+I L+KCG EAL++F EM G P+E TVV VL A LG L+ GK +H A+
Sbjct: 203 NSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAES 262
Query: 122 NGFLRN-VYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
+G ++ + V NAL+D Y K G LE +F M+ R VVSW+++I G A++
Sbjct: 263 SGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGID 322
Query: 181 XXXXMIRVG-MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
MI G + PN TF+GVL CS+ G V++G L +M + + EHYG +VDL
Sbjct: 323 LFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDL 382
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY 299
+SR+GR+ EA + + NM V N +WG+LL CR H ++ LAE A L K++ N G Y
Sbjct: 383 MSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNY 442
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSI 336
V++SN+YAE G+W++V ++R LMK ++K+ G S+I
Sbjct: 443 VLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 113/276 (40%), Gaps = 36/276 (13%)
Query: 31 NIMIAHLINV----GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEK 86
N+++AH I++ A +FS + NV + ++I + G E+L FS M+
Sbjct: 36 NLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKS 95
Query: 87 DGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGF---------------------- 124
G +E T +L +C+ L DL FGK VH GF
Sbjct: 96 RGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGD 155
Query: 125 ---------LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXX 175
RNV V N +I + G +E G +F+ M ER++VSW+SMI +
Sbjct: 156 AQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRD 215
Query: 176 XXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGC 235
MI G P+ T + VL + +G++D G+ + + +
Sbjct: 216 REALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNA 275
Query: 236 LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
LVD ++G LE A + M N V W L+ G
Sbjct: 276 LVDFYCKSGDLEAATAIFRKMQ-RRNVVSWNTLISG 310
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/374 (36%), Positives = 212/374 (56%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++ YA CG +AR +FD+M ++D T+ +I+ + G V A LFS M + +W
Sbjct: 275 VIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTW 334
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I GL + EE + F EM + GS+PN VT+ ++L + +L+ GK +H FA
Sbjct: 335 NAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIR 394
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
NG N+YV ++ID Y K G L RVF+ ++R++++W+++I +A+H
Sbjct: 395 NGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSL 454
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M +G KP+ VT VL A +H G D + + M Y I PGVEHY C+V +LS
Sbjct: 455 FDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLS 514
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RAG+L +A E I+ M + P VWGALL G + ++ +A A L +++ N G Y +
Sbjct: 515 RAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTI 574
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
M+N+Y +AG+WEE +R MK G+KK PG S I + + F+A D + ++K ++E+
Sbjct: 575 MANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEI 634
Query: 362 WEKLLVKMKMKGYI 375
E L+ M K YI
Sbjct: 635 IEGLVESMSDKEYI 648
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 118/266 (44%), Gaps = 19/266 (7%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ N MI + + +AR +F M +R+V SW S+I G ++ G E+ K++ M
Sbjct: 166 DVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAML 225
Query: 86 K-DGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCL 144
KPN VTV++V AC Q DL FG VH+ N ++ +CNA+I Y KCG L
Sbjct: 226 ACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSL 285
Query: 145 EEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHAC 204
+ +F+ M E+ V++ ++I G+ H M +G+ G++
Sbjct: 286 DYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNN 345
Query: 205 SHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIA---------- 254
H +++ R ++ R P L+ L+ + L+ +E+ A
Sbjct: 346 HHEEVINSFREMIRCGSR-----PNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNN 400
Query: 255 ---NMSVPPNRVVWGALLGGCRLHKN 277
S+ N G LLG R+ N
Sbjct: 401 IYVTTSIIDNYAKLGFLLGAQRVFDN 426
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 146/335 (43%), Gaps = 19/335 (5%)
Query: 14 HARLM-FDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCG 72
HAR++ F P +A+ +I+ A +F + RN S+ +++
Sbjct: 45 HARIVVFSIKPDNFLAS--KLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 73 MCEEALKVF------SEMEKDGSKPNEVTVVAVLVACAQLGDLEFG---KSVHRFAKGNG 123
M +A +F S D ++P+ +++ VL A + D G + VH F G
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGG 162
Query: 124 FLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXX 183
F +V+V N +I Y KC +E +VF+ M ER VVSW+SMI G++
Sbjct: 163 FDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYK 222
Query: 184 XMIRVG-MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSR 242
M+ KPN VT I V AC + G + M ++ I + ++ ++
Sbjct: 223 AMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENH-IQMDLSLCNAVIGFYAK 281
Query: 243 AGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVM 302
G L+ AR + MS + V +GA++ G H L +EAM S+++ + + M
Sbjct: 282 CGSLDYARALFDEMS-EKDSVTYGAIISGYMAHG---LVKEAMALFSEMESIGLSTWNAM 337
Query: 303 SNVYAEAGKWEEV-SRIRRLMKSRGVKKTPGCSSI 336
+ + EEV + R +++ T SS+
Sbjct: 338 ISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSL 372
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 137/430 (31%), Positives = 227/430 (52%), Gaps = 5/430 (1%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + AR F MP++ +W +VI G A G EEAL + +M G ++ T+ ++
Sbjct: 273 GDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMI 332
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
+L LE K H NGF + AL+D Y K G ++ VF+ + + ++
Sbjct: 333 RISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNII 392
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
SW++++ G+A H MI + PN+VTF+ VL AC++ GL ++G + M
Sbjct: 393 SWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSM 452
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
+GI P HY C+++LL R G L+EA I + +W ALL CR+ +N+ L
Sbjct: 453 SEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLEL 512
Query: 281 AEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDG 340
L + G YVVM N+Y GK E + + ++S+G+ P C+ + +
Sbjct: 513 GRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGD 572
Query: 341 VVHEFVAGDE----THPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLY 396
H F++GD + I++ ++L+ ++ GY + +L D+++ +++ + Y
Sbjct: 573 QTHSFLSGDRFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRY 632
Query: 397 RHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFK 456
HSEKLA+ YGL+NT ++I +N R+C++CH + +S + RE+VVRD +RFH FK
Sbjct: 633 -HSEKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFK 691
Query: 457 DGACTCKDYW 466
+G C+C YW
Sbjct: 692 EGKCSCGGYW 701
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 162/353 (45%), Gaps = 21/353 (5%)
Query: 32 IMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKP 91
I++ H + G + AR LF +P+RN+ S+ S+I G G EA ++F M ++ S
Sbjct: 164 ILLMH-VKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDC 222
Query: 92 NEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVF 151
T +L A A LG + GK +H A G + N +V LIDMY KCG +E+ F
Sbjct: 223 ETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAF 282
Query: 152 EGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVD 211
E M E+T V+W+++I G+A+H M G+ + T ++ + + ++
Sbjct: 283 ECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLE 342
Query: 212 KGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ + R+ G + LVD S+ GR++ AR V + N + W AL+GG
Sbjct: 343 LTKQAHASLIRN-GFESEIVANTALVDFYSKWGRVDTARYVFDKLP-RKNIISWNALMGG 400
Query: 272 ----------CRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRL 321
+L + ++ A A H++ L +L+ Y +S E G WE + +
Sbjct: 401 YANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLS----EQG-WEIFLSMSEV 455
Query: 322 --MKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMK 372
+K R + + DG++ E +A P K MW LL +M+
Sbjct: 456 HGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAP-LKTTVNMWAALLNACRMQ 507
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 6/224 (2%)
Query: 63 SVIYGLAKCGMCEEALKVFSEMEKDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
S I L C EA ++F +E S K T A++ AC +L + K V+ F
Sbjct: 92 SQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMS 151
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
NGF Y+ N ++ M+VKCG + + R+F+ + ER + S+ S+I GF
Sbjct: 152 NGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFEL 211
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M TF +L A + +G + G+ L + G+V L+D+ S
Sbjct: 212 FKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQ-LHVCALKLGVVDNTFVSCGLIDMYS 270
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
+ G +E+AR M V W ++ G LH +EEA+
Sbjct: 271 KCGDIEDARCAFECMP-EKTTVAWNNVIAGYALHG---YSEEAL 310
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 140/393 (35%), Positives = 216/393 (54%), Gaps = 8/393 (2%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQ------ 55
L+H+Y G+ + A +F ++ + I +WN +I ++ G + A LFS + +
Sbjct: 335 LIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCN 394
Query: 56 --RNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGK 113
NV +WTSVI G G +++L+ F +M+ N VT+ +L CA+L L G+
Sbjct: 395 VKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGR 454
Query: 114 SVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHX 173
+H N+ V NAL++MY KCG L EG VFE +R++ ++SW+S+I G+ MH
Sbjct: 455 EIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHG 514
Query: 174 XXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHY 233
MI G P+ + + VL ACSH GLV+KGR + M + +G+ P EHY
Sbjct: 515 FAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHY 574
Query: 234 GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDL 293
C+VDLL R G L+EA E++ NM + P V GALL CR+HKN+ +AE LS L+
Sbjct: 575 ACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEP 634
Query: 294 LNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHP 353
G Y+++SN+Y+ G+WEE + +R L K + +KK G S I + ++F +G
Sbjct: 635 ERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQS 694
Query: 354 QAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLE 386
+ + I+ + E L+ M KG D + DL+
Sbjct: 695 EFETIYPVLEDLVSHMLKKGPTHDGNNYEDDLD 727
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 125/299 (41%), Gaps = 15/299 (5%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVR-- 59
LL LY G A +F +MP R+ +WN+MI +A +F M + +
Sbjct: 199 LLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPD 258
Query: 60 --SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
+WTSV+ ++CG E+ LK F M G+ + + CA+L L + VH
Sbjct: 259 EVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHG 318
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
+ GF + NALI +Y K G +++ +F +R + + SW+S+I F
Sbjct: 319 YVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDE 378
Query: 178 XXXXXXXMIRV----GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHY 233
+ + +K N VT+ V+ C+ G D M+ + V
Sbjct: 379 ALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVT-I 437
Query: 234 GCLVDLLSRAGRLEEAREV---IANMSVPPNRVVWGALL---GGCRLHKNIVLAEEAMR 286
C++ + + L RE+ + S+ N +V AL+ C L L EA+R
Sbjct: 438 CCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIR 496
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 3/219 (1%)
Query: 14 HARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQ---RNVRSWTSVIYGLAK 70
HA+++ R + +I+ +G + AR++F ++ ++R W S++
Sbjct: 76 HAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVS 135
Query: 71 CGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYV 130
G+ E AL+++ M + G + + +L AC LG ++ H G N++V
Sbjct: 136 HGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHV 195
Query: 131 CNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGM 190
N L+ +Y K G + + Y +F M R +SW+ MI GF+ M R
Sbjct: 196 VNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEF 255
Query: 191 KPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPG 229
KP+ VT+ VL S G + +MR V G
Sbjct: 256 KPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSG 294
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 258 bits (660), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 130/315 (41%), Positives = 193/315 (61%), Gaps = 6/315 (1%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR +F +PQ +V W ++ G +CG+ E L+VF EM G +P+E +V L ACAQ
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQ 230
Query: 106 LGDLEFGKSVHRFAKGNGFLR-NVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSS 164
+G L GK +H F K ++ +V+V AL+DMY KCGC+E VFE + R V SW++
Sbjct: 231 VGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAA 290
Query: 165 MIVGFAMHXXXXXXXXXXXXMIRV-GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRD 223
+I G+A + + R G+KP+ V +GVL AC+H G +++GR +L M
Sbjct: 291 LIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEAR 350
Query: 224 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEE 283
YGI P EHY C+VDL+ RAGRL++A ++I M + P VWGALL GCR HKN+ L E
Sbjct: 351 YGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGEL 410
Query: 284 AMRHLSKLDLLN----DGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITID 339
A+++L L+ N + V +SN+Y + E ++R +++ RG++KTPG S + +D
Sbjct: 411 AVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVD 470
Query: 340 GVVHEFVAGDETHPQ 354
G+V +FV+GD +HP
Sbjct: 471 GIVTKFVSGDVSHPN 485
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 123/268 (45%), Gaps = 8/268 (2%)
Query: 11 ETRHARLMFDKMPQRDIATWNIMIA--HLINVG-YVGAARDLFSSMPQRNVRSWTSVIYG 67
++ H+ + + + A ++ A HL N+ + A +F S+ N + ++I
Sbjct: 28 KSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRI 87
Query: 68 LAKCGMCEEALKVFSEM---EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNG- 123
++ L+ F M E++ P+ +T ++VAC + GK +H + NG
Sbjct: 88 CSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGV 147
Query: 124 FLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXX 183
FL + +V ++ +YV+ L + +VF+ + + VV W ++ G+
Sbjct: 148 FLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFK 207
Query: 184 XMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRA 243
M+ G++P+ + L AC+ VG + +G+ + +++ I V LVD+ ++
Sbjct: 208 EMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKC 267
Query: 244 GRLEEAREVIANMSVPPNRVVWGALLGG 271
G +E A EV ++ N W AL+GG
Sbjct: 268 GCIETAVEVFEKLT-RRNVFSWAALIGG 294
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 3/152 (1%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ D+ ++ G + A ++F + +RNV SW ++I G A G ++A
Sbjct: 251 ESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDR 310
Query: 84 MEK-DGSKPNEVTVVAVLVACAQLGDLEFGKS-VHRFAKGNGFLRNVYVCNALIDMYVKC 141
+E+ DG KP+ V ++ VL ACA G LE G++ + G + ++D+ +
Sbjct: 311 IEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRA 370
Query: 142 GCLEEGYRVFEGMRERTVVS-WSSMIVGFAMH 172
G L++ + E M + + S W +++ G H
Sbjct: 371 GRLDDALDLIEKMPMKPLASVWGALLNGCRTH 402
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 258 bits (659), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 138/341 (40%), Positives = 198/341 (58%), Gaps = 5/341 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y G A +FD+MP+R+ TWN+MI L N+G A MP R V SW
Sbjct: 164 LVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSW 223
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEK-DGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
T++I G A+ +EA+ +FS M D KPNE+T++A+L A LGDL+ SVH +
Sbjct: 224 TTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVG 283
Query: 121 GNGFLR-NVYVCNALIDMYVKCGCLEEGYRVFEGMRE--RTVVSWSSMIVGFAMHXXXXX 177
GF+ ++ V N+LID Y KCGC++ ++ F + + +VSW++MI FA+H
Sbjct: 284 KRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKE 343
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKG-RALLTIMRRDYGIVPGVEHYGCL 236
M R+G+KPN VT I VL+ACSH GL ++ M +Y I P V+HYGCL
Sbjct: 344 AVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCL 403
Query: 237 VDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLND 296
VD+L R GRLEEA ++ + + VVW LLG C ++ + LAE R L +L+ +
Sbjct: 404 VDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHG 463
Query: 297 GYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSIT 337
G YV+MSN++ G++ + R R+ M RGV K PG S +T
Sbjct: 464 GDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQVT 504
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 255 bits (652), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 130/315 (41%), Positives = 192/315 (60%), Gaps = 6/315 (1%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR +F +PQ +V W ++ G +CG+ E L+VF EM G +P+E +V L ACAQ
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQ 230
Query: 106 LGDLEFGKSVHRFAKGNGFLR-NVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSS 164
+G L GK +H F K ++ +V+V AL+DMY KCGC+E VF+ + R V SW++
Sbjct: 231 VGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAA 290
Query: 165 MIVGFAMHXXXXXXXXXXXXMIRV-GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRD 223
+I G+A + + R G+KP+ V +GVL AC+H G +++GR++L M
Sbjct: 291 LIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEAR 350
Query: 224 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEE 283
Y I P EHY C+VDL+ RAGRL++A +I M + P VWGALL GCR HKN+ L E
Sbjct: 351 YEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGEL 410
Query: 284 AMRHLSKLDLLN----DGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITID 339
A+++L L+ N + V +SN+Y + E S++R +++ RGV+KTPG S + +D
Sbjct: 411 AVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVD 470
Query: 340 GVVHEFVAGDETHPQ 354
G V +FV+GD +HP
Sbjct: 471 GNVTKFVSGDVSHPN 485
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 133/289 (46%), Gaps = 11/289 (3%)
Query: 11 ETRHARLMFDKMPQRDIATWNIMIA--HLINVG-YVGAARDLFSSMPQRNVRSWTSVIYG 67
++ H+ + + + A ++ A HL N+ + A +F S+ N + ++I
Sbjct: 28 KSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRI 87
Query: 68 LAKCGMCEEALKVFSEM---EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNG- 123
++ L+ F M E++ P+ +T ++VAC + GK +H + NG
Sbjct: 88 CSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGV 147
Query: 124 FLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXX 183
FL + +V ++ +YV+ L + +VF+ + + VV W ++ G+
Sbjct: 148 FLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFR 207
Query: 184 XMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRA 243
M+ G++P+ + L AC+ VG + +G+ + +++ I V LVD+ ++
Sbjct: 208 EMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKC 267
Query: 244 GRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLD 292
G +E A EV ++ N W AL+GG + A++AM L +L+
Sbjct: 268 GCIETAVEVFKKLT-RRNVFSWAALIGGYAAYG---YAKKAMTCLERLE 312
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ D+ ++ G + A ++F + +RNV SW ++I G A G ++A+
Sbjct: 251 ESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLER 310
Query: 84 MEK-DGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL---RNVYVCNALIDMYV 139
+E+ DG KP+ V ++ VL ACA G LE G+S+ + + Y C ++D+
Sbjct: 311 LEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSC--IVDLMC 368
Query: 140 KCGCLEEGYRVFEGMRERTVVS-WSSMIVGFAMH 172
+ G L++ + E M + + S W +++ G H
Sbjct: 369 RAGRLDDALNLIEKMPMKPLASVWGALLNGCRTH 402
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/368 (38%), Positives = 207/368 (56%), Gaps = 3/368 (0%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
YA A +F MP+RD A+WN MI I + A LF MP++NV SWT++I
Sbjct: 243 YAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMI 302
Query: 66 YGLAKCGMCEEALKVFSEMEKDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGF 124
G + EEAL VFS+M +DGS KPN T V++L AC+ L L G+ +H+ +
Sbjct: 303 TGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVH 362
Query: 125 LRNVYVCNALIDMYVKCGCLEEGYRVFEG--MRERTVVSWSSMIVGFAMHXXXXXXXXXX 182
+N V +AL++MY K G L ++F+ + +R ++SW+SMI +A H
Sbjct: 363 QKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMY 422
Query: 183 XXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSR 242
M + G KP+ VT++ +L ACSH GLV+KG + RD + EHY CLVDL R
Sbjct: 423 NQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGR 482
Query: 243 AGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVM 302
AGRL++ I +R +GA+L C +H + +A+E ++ + + + G YV+M
Sbjct: 483 AGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLM 542
Query: 303 SNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMW 362
SN+YA GK EE + +R MK +G+KK PGCS + + H FV GD++HPQ + + +
Sbjct: 543 SNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSIL 602
Query: 363 EKLLVKMK 370
L KM+
Sbjct: 603 SDLRNKMR 610
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 131/251 (52%), Gaps = 10/251 (3%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
YA G A +FD+MP+R+I +WN M+ L+ G + A +LF MP+R+V SWT+++
Sbjct: 150 YAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMV 209
Query: 66 YGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL 125
GLAK G +EA ++F M + N ++ A++ AQ ++ + +
Sbjct: 210 DGLAKNGKVDEARRLFDCM----PERNIISWNAMITGYAQNNRIDEADQLFQVMPE---- 261
Query: 126 RNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM 185
R+ N +I +++ + + +F+ M E+ V+SW++MI G+ + M
Sbjct: 262 RDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKM 321
Query: 186 IRVG-MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAG 244
+R G +KPN T++ +L ACS + + +G+ + ++ + + L+++ S++G
Sbjct: 322 LRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIV-TSALLNMYSKSG 380
Query: 245 RLEEAREVIAN 255
L AR++ N
Sbjct: 381 ELIAARKMFDN 391
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 95/169 (56%), Gaps = 11/169 (6%)
Query: 6 YASCGETRHARLMFDKMPQR-DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSV 64
Y G+ R AR +FD++ R ++ TW M++ + + A LF MP+RNV SW ++
Sbjct: 87 YIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTM 146
Query: 65 IYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSV-HRFAKGNG 123
I G A+ G ++AL++F EM + N V+ +++ A Q G ++ ++ R +
Sbjct: 147 IDGYAQSGRIDKALELFDEM----PERNIVSWNSMVKALVQRGRIDEAMNLFERMPR--- 199
Query: 124 FLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMH 172
R+V A++D K G ++E R+F+ M ER ++SW++MI G+A +
Sbjct: 200 --RDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQN 246
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 114/262 (43%), Gaps = 50/262 (19%)
Query: 33 MIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPN 92
+I L VG + AR LF +P+R+V +WT VI G K G EA ++F ++ S+ N
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVD---SRKN 108
Query: 93 EVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE 152
VT A++ + L + + + RNV N +ID Y + G +++ +F+
Sbjct: 109 VVTWTAMVSGYLRSKQLSIAEMLFQEMPE----RNVVSWNTMIDGYAQSGRIDKALELFD 164
Query: 153 GMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDK 212
M ER +VSW+SM+ A G +D+
Sbjct: 165 EMPERNIVSWNSMV-----------------------------------KALVQRGRIDE 189
Query: 213 GRALLTIM-RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
L M RRD V + +VD L++ G+++EAR + M N + W A++ G
Sbjct: 190 AMNLFERMPRRD------VVSWTAMVDGLAKNGKVDEARRLFDCMP-ERNIISWNAMITG 242
Query: 272 CRLHKNIVLAEEAMRHLSKLDL 293
+ I A++ + + + D
Sbjct: 243 YAQNNRIDEADQLFQVMPERDF 264
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 186/291 (63%), Gaps = 2/291 (0%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR +F P+R + SW ++I GL G EA+++F +M++ G +P++ T+V+V +C
Sbjct: 171 ARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGG 230
Query: 106 LGDLEFGKSVHR--FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWS 163
LGDL +H+ ++ + N+LIDMY KCG ++ +FE MR+R VVSWS
Sbjct: 231 LGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWS 290
Query: 164 SMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRD 223
SMIVG+A + M G++PN +TF+GVL AC H GLV++G+ +M+ +
Sbjct: 291 SMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSE 350
Query: 224 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEE 283
+ + PG+ HYGC+VDLLSR G+L+EA++V+ M + PN +VWG L+GGC ++ +AE
Sbjct: 351 FELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEW 410
Query: 284 AMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCS 334
++ +L+ NDG YVV++NVYA G W++V R+R+LMK++ V K P S
Sbjct: 411 VAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYS 461
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 129/302 (42%), Gaps = 7/302 (2%)
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
W +++ + +A++V+ M + P+ ++ V+ A Q+ D GK +H A
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
GF+ + + + I +Y K G E +VF+ ER + SW+++I G
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT-IMRRDYGIVPGVEHYGCLVDL 239
M R G++P+ T + V +C +G + L +++ + L+D+
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDM 264
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDL-LNDGY 298
+ GR++ A + M N V W +++ G + N + A E R + + + N
Sbjct: 265 YGKCGRMDLASHIFEEMR-QRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKIT 323
Query: 299 YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGI 358
+V + + G EE +MKS + PG S G + + ++ D +AK +
Sbjct: 324 FVGVLSACVHGGLVEEGKTYFAMMKSE-FELEPGLSHY---GCIVDLLSRDGQLKEAKKV 379
Query: 359 FE 360
E
Sbjct: 380 VE 381
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 85/180 (47%), Gaps = 15/180 (8%)
Query: 2 LLHLYASCGETRHARLMFD---------KMPQRDIATWNIMIAHLINVGYVGAARDLFSS 52
++ + ASCG L F + DI N +I G + A +F
Sbjct: 221 MVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEE 280
Query: 53 MPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG 112
M QRNV SW+S+I G A G EAL+ F +M + G +PN++T V VL AC G +E G
Sbjct: 281 MRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEG 340
Query: 113 KSVHRFAKGNGFLR---NVYVCNALIDMYVKCGCLEEGYRVFEGMRER-TVVSWSSMIVG 168
K+ K L + Y C ++D+ + G L+E +V E M + V+ W ++ G
Sbjct: 341 KTYFAMMKSEFELEPGLSHYGC--IVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGG 398
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 134/347 (38%), Positives = 199/347 (57%), Gaps = 5/347 (1%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
DI N +I ++ A +F +M +R++ +W SV+ CG + L +F M
Sbjct: 296 DIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERML 355
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLR----NVYVCNALIDMYVKC 141
G +P+ VT+ VL C +L L G+ +H + +G L N ++ N+L+DMYVKC
Sbjct: 356 CSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKC 415
Query: 142 GCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVL 201
G L + VF+ MR + SW+ MI G+ + M R G+KP+ +TF+G+L
Sbjct: 416 GDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLL 475
Query: 202 HACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPN 261
ACSH G +++GR L M Y I+P +HY C++D+L RA +LEEA E+ + + N
Sbjct: 476 QACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDN 535
Query: 262 RVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRL 321
VVW ++L CRLH N LA A + L +L+ + G YV+MSNVY EAGK+EEV +R
Sbjct: 536 PVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDA 595
Query: 322 MKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVK 368
M+ + VKKTPGCS I + VH F G++THP+ K I + W L++
Sbjct: 596 MRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHD-WLSLVIS 641
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 117/238 (49%), Gaps = 15/238 (6%)
Query: 43 VGAARDLFSSMPQRNVRS-WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLV 101
V A+ +F +P R+ W +++ G ++ E+AL VFS+M ++G + T+ +VL
Sbjct: 211 VEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLS 270
Query: 102 ACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVS 161
A GD++ G+S+H A G ++ V NALIDMY K LEE +FE M ER + +
Sbjct: 271 AFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFT 330
Query: 162 WSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMR 221
W+S++ M+ G++P+ VT VL C + + +GR +
Sbjct: 331 WNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREI----- 385
Query: 222 RDYGIVPGVEH--------YGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
Y IV G+ + + L+D+ + G L +AR V +M V + W ++ G
Sbjct: 386 HGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRV-KDSASWNIMING 442
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 28/250 (11%)
Query: 48 DLFSSM-PQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQL 106
DLF+++ P + S S + G EE K + N T +A L CAQ
Sbjct: 26 DLFAAIKPSSALASLYSTV-----SGQIEENPKRYEHH-------NVATCIATLQRCAQR 73
Query: 107 GDLEFGKSVHRFAKGNGFLRNV-YVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
D G+ +H F GFL + +L++MY KCG + VF G ER V ++++
Sbjct: 74 KDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNAL 132
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVD----KGRALLTIMR 221
I GF ++ M G+ P+ TF +L + L D G A
Sbjct: 133 ISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVHGLAFKLGFD 192
Query: 222 RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLA 281
D + G LV S+ +E+A++V + + V+W AL+ G + I
Sbjct: 193 SDCYVGSG------LVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNG---YSQIFRF 243
Query: 282 EEAMRHLSKL 291
E+A+ SK+
Sbjct: 244 EDALLVFSKM 253
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 251 bits (641), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 141/427 (33%), Positives = 227/427 (53%), Gaps = 7/427 (1%)
Query: 46 ARDLFSSMPQR--NVRSWTSVIYGLAKCGMCEEALKVFSE-MEKDGSKPNEVTVVAVLVA 102
A ++F P + ++ TS+I G A+ G+ ++A+ +F + + +EV++ +L
Sbjct: 471 AEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAV 530
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
C LG E G +H +A G+ ++ + N+LI MY KC ++ ++F MRE V+SW
Sbjct: 531 CGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISW 590
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHV--GLVDKGRALLTIM 220
+S+I + + M +KP+ +T V+ A + + R L M
Sbjct: 591 NSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSM 650
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
+ Y I P EHY V +L G LEEA + I +M V P V ALL CR+H N +
Sbjct: 651 KTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSV 710
Query: 281 AEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDG 340
A+ + + Y++ SN+Y+ +G W IR M+ RG +K P S I +
Sbjct: 711 AKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHEN 770
Query: 341 VVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSE 400
+H F A D +HPQ K I+ E L+++ GY P+T VL ++++ +K FL+ HS
Sbjct: 771 KIHSFHARDTSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKS-FLFHHSA 829
Query: 401 KLALVYGLINTKP-GMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGA 459
KLA+ YG++++ G +R+MKN+ +C DCH FK +S + REIV+RD + FH F +G
Sbjct: 830 KLAVTYGILSSNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGK 889
Query: 460 CTCKDYW 466
C+C+D W
Sbjct: 890 CSCRDLW 896
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 6/210 (2%)
Query: 12 TRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKC 71
T+ F K+ + N +I+ + +G+ A +F S+ V S+T++I G ++
Sbjct: 99 TKAVHASFLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRL 158
Query: 72 GMCEEALKVFSEMEKDG-SKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYV 130
+ EALKVF M K G +PNE T VA+L AC ++ G +H +GFL +V+V
Sbjct: 159 NLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFV 218
Query: 131 CNALIDMYVK---CGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR 187
N+L+ +Y K C ++ ++F+ + +R V SW++++ M R
Sbjct: 219 SNSLMSLYDKDSGSSC-DDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNR 277
Query: 188 V-GMKPNYVTFIGVLHACSHVGLVDKGRAL 216
V G + T +L +C+ ++ +GR L
Sbjct: 278 VEGFGVDSFTLSTLLSSCTDSSVLLRGREL 307
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 80/151 (52%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ Y+ + + +++ M +D T+ MI ++ G V +A ++F+++ ++N ++
Sbjct: 326 LIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITY 385
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+++ G + G +ALK+F++M + G + + ++ + + AC + + + + +H F
Sbjct: 386 NALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIK 445
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFE 152
G N + AL+DM +C + + +F+
Sbjct: 446 FGTAFNPCIQTALLDMCTRCERMADAEEMFD 476
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 248 bits (634), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 161/511 (31%), Positives = 246/511 (48%), Gaps = 55/511 (10%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVR-- 59
L+ +Y+ CG+ AR +FD + +D+ TWN MI GY G A +LF+ M N+R
Sbjct: 393 LVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPN 452
Query: 60 --SWTSVIYGLAKCGMCEEALKVFSEMEKDGS---------------------------- 89
+W ++I G K G EA+ +F MEKDG
Sbjct: 453 IITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELF 512
Query: 90 --------KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNV----YVCNALIDM 137
PN VT++++L ACA L + + +H G RN+ V NAL D
Sbjct: 513 RKMQFSRFMPNSVTILSLLPACANLLGAKMVREIH----GCVLRRNLDAIHAVKNALTDT 568
Query: 138 YVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTF 197
Y K G +E +F GM + +++W+S+I G+ +H M G+ PN T
Sbjct: 569 YAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTL 628
Query: 198 IGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS 257
++ A +G VD+G+ + + DY I+P +EH +V L RA RLEEA + I M+
Sbjct: 629 SSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMN 688
Query: 258 VPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSR 317
+ +W + L GCR+H +I +A A +L L+ N ++S +YA K
Sbjct: 689 IQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLE 748
Query: 318 IRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPD 377
+ + +KK G S I + ++H F GD Q+K ++ L+ KM D
Sbjct: 749 GNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGD----QSKLCTDVLYPLVEKMSRLDNRSD 804
Query: 378 TSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPG--MSIRIMKNLRVCEDCHAAFKL 435
L +E+ ++E HSEK A+ +GLI++ +IRI+KNLR+C DCH K
Sbjct: 805 QYNGELWIEEEGREETCGI-HSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKY 863
Query: 436 VSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
VS+ +I++ D H FK+G C+CKDYW
Sbjct: 864 VSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 140/315 (44%), Gaps = 46/315 (14%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDI---------------------------------- 27
+L +YA CGE A F +M +RD+
Sbjct: 222 ILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPG 281
Query: 28 -ATWNIMIAHLINVGYVGAARDLFSSMPQ----RNVRSWTSVIYGLAKCGMCEEALKVFS 82
TWNI+I +G AA DL M +V +WT++I GL GM +AL +F
Sbjct: 282 LVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFR 341
Query: 83 EMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG 142
+M G PN VT+++ + AC+ L + G VH A GF+ +V V N+L+DMY KCG
Sbjct: 342 KMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCG 401
Query: 143 CLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLH 202
LE+ +VF+ ++ + V +W+SMI G+ M ++PN +T+ ++
Sbjct: 402 KLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMIS 461
Query: 203 ACSHVGLVDKGRA--LLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVP- 259
G D+G A L M +D + + ++ + G+ +EA E+ M
Sbjct: 462 GYIKNG--DEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSR 519
Query: 260 --PNRVVWGALLGGC 272
PN V +LL C
Sbjct: 520 FMPNSVTILSLLPAC 534
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 150/324 (46%), Gaps = 11/324 (3%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G HAR F + D+ +++ G + AR +F SM +RN+ +W+++I +
Sbjct: 100 GRILHAR--FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYS 157
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
+ E K+F M KDG P++ +L CA GD+E GK +H G +
Sbjct: 158 RENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLR 217
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
V N+++ +Y KCG L+ + F MRER V++W+S+++ + + M + G
Sbjct: 218 VSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEG 277
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
+ P VT+ ++ + +G D L+ M +GI V + ++ L G +A
Sbjct: 278 ISPGLVTWNILIGGYNQLGKCDAAMDLMQKMET-FGITADVFTWTAMISGLIHNGMRYQA 336
Query: 250 REVIANM---SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLND---GYYVVMS 303
++ M V PN V + + C K I E K+ ++D G +V
Sbjct: 337 LDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLV-- 394
Query: 304 NVYAEAGKWEEVSRIRRLMKSRGV 327
++Y++ GK E+ ++ +K++ V
Sbjct: 395 DMYSKCGKLEDARKVFDSVKNKDV 418
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 248 bits (632), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 136/361 (37%), Positives = 207/361 (57%), Gaps = 4/361 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+H+Y S + AR +FD+MP +++ TWN ++ G V +AR +F M +R+V +W
Sbjct: 149 LIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTW 208
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
+S+I G K G +AL++F +M + GS K NEVT+V+V+ ACA LG L GK+VHR+
Sbjct: 209 SSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYIL 268
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVF--EGMRERTVVSWSSMIVGFAMHXXXXXX 178
V + +LIDMY KCG + + + VF ++E + W+++I G A H
Sbjct: 269 DVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRES 328
Query: 179 XXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVD 238
M + P+ +TF+ +L ACSH GLV + ++ G P EHY C+VD
Sbjct: 329 LQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GAEPKSEHYACMVD 387
Query: 239 LLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY 298
+LSRAG +++A + I+ M + P + GALL GC H N+ LAE + L +L NDG
Sbjct: 388 VLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGR 447
Query: 299 YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGI 358
YV ++NVYA ++ +R M+ +GVKK G S + +DG H F+A D+TH + I
Sbjct: 448 YVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKI 507
Query: 359 F 359
+
Sbjct: 508 Y 508
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 125/287 (43%), Gaps = 38/287 (13%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ + + + L + G V A S + W VI G + E+++ V+ +
Sbjct: 39 EEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQ 98
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALI-------- 135
M + G P+ +T ++ + ++L + + G S+H +G ++++CN LI
Sbjct: 99 MLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRD 158
Query: 136 -----------------------DMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMH 172
D Y K G + VF+ M ER VV+WSSMI G+
Sbjct: 159 QASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKR 218
Query: 173 XXXXXXXXXXXXMIRVG-MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR--DYGIVPG 229
M+R+G K N VT + V+ AC+H+G +++G+ T+ R D +
Sbjct: 219 GEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGK---TVHRYILDVHLPLT 275
Query: 230 VEHYGCLVDLLSRAGRLEEAREVIANMSVP-PNRVVWGALLGGCRLH 275
V L+D+ ++ G + +A V SV + ++W A++GG H
Sbjct: 276 VILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASH 322
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 136/390 (34%), Positives = 211/390 (54%), Gaps = 14/390 (3%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y+ CG A + + QR + G + + + Q SW
Sbjct: 523 LIDMYSKCGMIEEAEKIHSRFFQRANVS-----------GTMEELEKMHNKRLQEMCVSW 571
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
S+I G E+A +F+ M + G P++ T VL CA L GK +H
Sbjct: 572 NSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIK 631
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+VY+C+ L+DMY KCG L + +FE R V+W++MI G+A H
Sbjct: 632 KELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQL 691
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
MI +KPN+VTFI +L AC+H+GL+DKG +M+RDYG+ P + HY +VD+L
Sbjct: 692 FERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILG 751
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIV-LAEEAMRHLSKLDLLNDGYYV 300
++G+++ A E+I M + V+W LLG C +H+N V +AEEA L +LD + Y
Sbjct: 752 KSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYT 811
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFE 360
++SNVYA+AG WE+VS +RR M+ +KK PGCS + + +H F+ GD+ HP+ + I+E
Sbjct: 812 LLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYE 871
Query: 361 MWEKLLVKMKMKGYIPDTSVVLLDLEDAKQ 390
E L+ +MK + + V +++E+ Q
Sbjct: 872 --ELGLIYSEMKPFDDSSFVRGVEVEEEDQ 899
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 132/271 (48%), Gaps = 4/271 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL +Y + + A ++FDKMP RD+ +WN MI + A F+ MP R+V SW
Sbjct: 89 LLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSW 148
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
S++ G + G ++++VF +M ++G + + T +L C+ L D G +H
Sbjct: 149 NSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVR 208
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
G +V +AL+DMY K E RVF+G+ E+ VSWS++I G +
Sbjct: 209 VGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKF 268
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT-IMRRDYGIVPGVEHYGCLVDLL 240
M +V + + VL +C+ + + G L ++ D+ G+ L D+
Sbjct: 269 FKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFA-ADGIVRTATL-DMY 326
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
++ +++A +++ + S NR + A++ G
Sbjct: 327 AKCDNMQDA-QILFDNSENLNRQSYNAMITG 356
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 128/291 (43%), Gaps = 28/291 (9%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ N I + A +F M +R+ SW ++I + G E L +F M
Sbjct: 416 DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSML 475
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
+ +P+E T ++L AC G L +G +H +G N V +LIDMY KCG +E
Sbjct: 476 RSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIE 534
Query: 146 EGYRVFEGMRERT--------------------VVSWSSMIVGFAMHXXXXXXXXXXXXM 185
E ++ +R VSW+S+I G+ M M
Sbjct: 535 EAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRM 594
Query: 186 IRVGMKPNYVTFIGVLHACSHVGLVDKGRAL-LTIMRRDYGIVPGVEHYGCLVDLLSRAG 244
+ +G+ P+ T+ VL C+++ G+ + +++++ + V LVD+ S+ G
Sbjct: 595 MEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE--LQSDVYICSTLVDMYSKCG 652
Query: 245 RLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLN 295
L ++R ++ S+ + V W A++ G H EEA++ ++ L N
Sbjct: 653 DLHDSR-LMFEKSLRRDFVTWNAMICGYAHHGK---GEEAIQLFERMILEN 699
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 4/208 (1%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A+ LF + N +S+ ++I G ++ +AL +F + G +E+++ V ACA
Sbjct: 335 AQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACAL 394
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
+ L G ++ A + +V V NA IDMY KC L E +RVF+ MR R VSW+++
Sbjct: 395 VKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAI 454
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
I + M+R ++P+ TF +L AC+ L +I++
Sbjct: 455 IAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMA 514
Query: 226 IVPGVEHYGC-LVDLLSRAGRLEEAREV 252
V GC L+D+ S+ G +EEA ++
Sbjct: 515 SNSSV---GCSLIDMYSKCGMIEEAEKI 539
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 12/228 (5%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGD 108
+F +P++N SW+++I G + + ALK F EM+K + ++ +VL +CA L +
Sbjct: 237 VFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 296
Query: 109 LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVG 168
L G +H A + F + V A +DMY KC +++ +F+ S+++MI G
Sbjct: 297 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITG 356
Query: 169 FAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHV-----GLVDKGRALLTIMRRD 223
++ ++ G+ + ++ GV AC+ V GL G A+ + + D
Sbjct: 357 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLD 416
Query: 224 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ +D+ + L EA V M + V W A++
Sbjct: 417 VCVANAA------IDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 88/225 (39%), Gaps = 33/225 (14%)
Query: 99 VLVACAQLGDLEFGKSVHRFAKGNGF-------------------------------LRN 127
V CA+ G LE GK H +GF LR+
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 128 VYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR 187
V N +I+ Y K + + F M R VVSW+SM+ G+ + M R
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173
Query: 188 VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLE 247
G++ + TF +L CS + G + I+ R G V L+D+ ++ R
Sbjct: 174 EGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVR-VGCDTDVVAASALLDMYAKGKRFV 232
Query: 248 EAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLD 292
E+ V + N V W A++ GC + + LA + + + K++
Sbjct: 233 ESLRVFQGIP-EKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVN 276
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/369 (36%), Positives = 198/369 (53%), Gaps = 32/369 (8%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y++C + +RL+FD+M +D+ WN M A GYV + +
Sbjct: 495 LIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFA-----GYVQQSEN------------- 536
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
EEAL +F E++ +P+E T ++ A L ++ G+ H
Sbjct: 537 -------------EEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLK 583
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
G N Y+ NAL+DMY KCG E+ ++ F+ R VV W+S+I +A H
Sbjct: 584 RGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQM 643
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M+ G++PNY+TF+GVL ACSH GLV+ G +M R +GI P EHY C+V LL
Sbjct: 644 LEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLG 702
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RAGRL +ARE+I M P +VW +LL GC N+ LAE A D + G + +
Sbjct: 703 RAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTM 762
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
+SN+YA G W E ++R MK GV K PG S I I+ VH F++ D++H +A I+E+
Sbjct: 763 LSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEV 822
Query: 362 WEKLLVKMK 370
+ LLV+++
Sbjct: 823 LDDLLVQIR 831
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 138/269 (51%), Gaps = 14/269 (5%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G+ HA ++ + + D + N++I + G V AA LF+ MP +N+ SWT+++ G
Sbjct: 268 GKQIHAHILRYGL-EMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYK 326
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
+ + +EA+++F+ M K G KP+ ++L +CA L L FG VH + + Y
Sbjct: 327 QNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSY 386
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFA-------MHXXXXXXXXXX 182
V N+LIDMY KC CL + +VF+ VV +++MI G++ +H
Sbjct: 387 VTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR 446
Query: 183 XXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSR 242
+IR P+ +TF+ +L A + + + + + +M + YG+ + L+D+ S
Sbjct: 447 FRLIR----PSLLTFVSLLRASASLTSLGLSKQIHGLMFK-YGLNLDIFAGSALIDVYSN 501
Query: 243 AGRLEEAREVIANMSVPPNRVVWGALLGG 271
L+++R V M V + V+W ++ G
Sbjct: 502 CYCLKDSRLVFDEMKV-KDLVIWNSMFAG 529
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 127/248 (51%), Gaps = 4/248 (1%)
Query: 25 RDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM 84
RD+ ++I + G + AR +F ++P+++ +WT++I G K G +L++F ++
Sbjct: 181 RDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQL 240
Query: 85 EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCL 144
+D P+ + VL AC+ L LE GK +H G + + N LID YVKCG +
Sbjct: 241 MEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRV 300
Query: 145 EEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHAC 204
+++F GM + ++SW++++ G+ + M + G+KP+ +L +C
Sbjct: 301 IAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSC 360
Query: 205 SHVGLVDKGRAL-LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRV 263
+ + + G + ++ + G V + L+D+ ++ L +AR+V ++ + V
Sbjct: 361 ASLHALGFGTQVHAYTIKANLGNDSYVTN--SLIDMYAKCDCLTDARKVF-DIFAAADVV 417
Query: 264 VWGALLGG 271
++ A++ G
Sbjct: 418 LFNAMIEG 425
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 131/285 (45%), Gaps = 23/285 (8%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D NI+I G + AR +F MP+RN+ SW++++ G+ EE+L VF E
Sbjct: 78 DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFW 137
Query: 86 KD-GSKPNEVTVVAVLVACAQLGDLEFGK------SVHRFAKGNGFLRNVYVCNALIDMY 138
+ PNE + + + AC+ L G+ + F +GF R+VYV LID Y
Sbjct: 138 RTRKDSPNEYILSSFIQACSGLD----GRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFY 193
Query: 139 VKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFI 198
+K G ++ VF+ + E++ V+W++MI G ++ + P+
Sbjct: 194 LKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILS 253
Query: 199 GVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSV 258
VL ACS + ++ G+ + + R YG+ L+D + GR+ A ++ M
Sbjct: 254 TVLSACSILPFLEGGKQIHAHILR-YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGM-- 310
Query: 259 PPNR--VVWGALLGGCR---LHKNIVLAEEAMRHLSKLDLLNDGY 298
PN+ + W LL G + LHK A E +SK L D Y
Sbjct: 311 -PNKNIISWTTLLSGYKQNALHKE---AMELFTSMSKFGLKPDMY 351
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 123/291 (42%), Gaps = 35/291 (12%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +YA C AR +FD D+ +N MI GY R W
Sbjct: 391 LIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIE-----GY------------SRLGTQW 433
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
EAL +F +M +P+ +T V++L A A L L K +H
Sbjct: 434 E-----------LHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK 482
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
G +++ +ALID+Y C CL++ VF+ M+ + +V W+SM G+
Sbjct: 483 YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNL 542
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL-LTIMRRDYGIVPGVEHYGCLVDLL 240
+ +P+ TF ++ A ++ V G+ +++R P + + L+D+
Sbjct: 543 FLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN--ALLDMY 600
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL 291
++ G E+A + + + + V W +++ H ++A++ L K+
Sbjct: 601 AKCGSPEDAHKAF-DSAASRDVVCWNSVISSYANHGE---GKKALQMLEKM 647
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 7/180 (3%)
Query: 123 GFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXX 182
G + Y+ N LI++Y + G + +VFE M ER +VSWS+M+ H
Sbjct: 74 GLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVF 133
Query: 183 XXMIRVGM-KPNYVTFIGVLHACSHVGLVDKGRALLTIMRR---DYGIVPGVEHYGCLVD 238
R PN + ACS GL +GR ++ ++ G V L+D
Sbjct: 134 LEFWRTRKDSPNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLID 191
Query: 239 LLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY 298
+ G ++ AR V + + V W ++ GC ++ + L + +++ DGY
Sbjct: 192 FYLKDGNIDYARLVFDALP-EKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGY 250
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 135/386 (34%), Positives = 215/386 (55%), Gaps = 15/386 (3%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINV----GYVGAARDLF--SSMPQRNVRSWTS 63
G+ HA L+ R + M ++LI++ G + ++ LF S +R+ +W S
Sbjct: 438 GKQTHAFLI------RQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNS 491
Query: 64 VIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNG 123
+I G + G E+ VF +M + +PN VTV ++L AC+Q+G ++ GK +H F+
Sbjct: 492 MISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQY 551
Query: 124 FLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXX 183
+NV+V +AL+DMY K G ++ +F +ER V++++MI+G+ H
Sbjct: 552 LDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFL 611
Query: 184 XMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRA 243
M G+KP+ +TF+ VL ACS+ GL+D+G + MR Y I P EHY C+ D+L R
Sbjct: 612 SMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRV 671
Query: 244 GRLEEAREVIANMSVPPNRV-VWGALLGGCRLHKNIVLAEEAMRHLSKLDLLND--GYYV 300
GR+ EA E + + N +WG+LLG C+LH + LAE L+K D + GY V
Sbjct: 672 GRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEV 731
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFE 360
++SN+YAE KW+ V ++RR M+ +G+KK G S I I G V+ FV+ D+ HP + I++
Sbjct: 732 LLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYD 791
Query: 361 MWEKLLVKMKMKGYIPDTSVVLLDLE 386
+ + L M+ ++ V LE
Sbjct: 792 VIDGLAKDMRGDSFLTTLPTVTPSLE 817
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 122/251 (48%), Gaps = 8/251 (3%)
Query: 25 RDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM 84
+D+ + I+ +G + ++R +F S +RN+ W ++I + E++++F +
Sbjct: 249 KDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELF--L 306
Query: 85 EKDGSK---PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKC 141
E GSK +EVT + A + L +E G+ H F N + + N+L+ MY +C
Sbjct: 307 EAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRC 366
Query: 142 GCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVL 201
G + + + VF MRER VVSW++MI F + M + G K +Y+T +L
Sbjct: 367 GSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALL 426
Query: 202 HACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPP- 260
A S++ + G+ + R G+ Y L+D+ S++G + ++++
Sbjct: 427 SAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY--LIDMYSKSGLIRISQKLFEGSGYAER 484
Query: 261 NRVVWGALLGG 271
++ W +++ G
Sbjct: 485 DQATWNSMISG 495
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 121/275 (44%), Gaps = 22/275 (8%)
Query: 11 ETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAK 70
+TRH+ + ++ + G AR LF ++P+ W ++I G
Sbjct: 23 QTRHSSTFSPPTLTPQTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFIC 82
Query: 71 CGMCEEALKVFSEMEKDGSKPN--EVTVVAVLVACAQLGDLEFGKSVH----RFAKGNGF 124
+ EAL +S M+K N T + L ACA+ +L+ GK+VH R + +
Sbjct: 83 NNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSR 142
Query: 125 LRNVYVCNALIDMYVKC----GCLEEGY--RVFEGMRERTVVSWSSMIVGFAMHXXXXXX 178
+ V N+L++MYV C C E +VF+ MR + VV+W+++I +
Sbjct: 143 V----VHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEA 198
Query: 179 XXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR---DYGIVPGVEHYGC 235
M+R+ +KP+ V+F+ V A S + K +M + +Y V +
Sbjct: 199 CRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEY--VKDLFVVSS 256
Query: 236 LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
+ + + G +E +R V + V N VW ++G
Sbjct: 257 AISMYAELGDIESSRRVF-DSCVERNIEVWNTMIG 290
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 100/215 (46%), Gaps = 8/215 (3%)
Query: 47 RDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQL 106
R +F +M ++NV +W ++I K G EA + F M + KP+ V+ V V A +
Sbjct: 168 RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSIS 227
Query: 107 GDLEFGKSVH--RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSS 164
++ + G+ ++++++V ++ I MY + G +E RVF+ ER + W++
Sbjct: 228 RSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNT 287
Query: 165 MIVGFAMHXXXXXXXXXXXXMIRVGMK---PNYVTFIGVLHACSHVGLVDKGRALLTIMR 221
MI + + I G K + VT++ A S + V+ GR +
Sbjct: 288 MIGVYVQNDCLVESIELFLEAI--GSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVS 345
Query: 222 RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM 256
+++ +P V L+ + SR G + ++ V +M
Sbjct: 346 KNFRELPIV-IVNSLMVMYSRCGSVHKSFGVFLSM 379
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 246 bits (627), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 125/330 (37%), Positives = 191/330 (57%), Gaps = 1/330 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL Y G AR +FD+M +R++ +WN MI+ G V A+++F SMP R+V SW
Sbjct: 212 LLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSW 271
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
+++ A G E L+VF++M D + KP+ T+V+VL ACA LG L G+ VH +
Sbjct: 272 NAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYID 331
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
+G ++ AL+DMY KCG +++ VF +R V +W+S+I ++H
Sbjct: 332 KHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALE 391
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M+ G KPN +TFIGVL AC+HVG++D+ R L +M Y + P +EHYGC+VDLL
Sbjct: 392 IFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLL 451
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYV 300
R G++EEA E++ + ++ +LLG C+ + AE L +L+L + Y
Sbjct: 452 GRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYA 511
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVKKT 330
MSN+YA G+WE+V RR M++ V ++
Sbjct: 512 QMSNLYASDGRWEKVIDGRRNMRAERVNRS 541
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 94/227 (41%), Gaps = 41/227 (18%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
V A + + + N + SVI A E AL VF EM P++ + VL A
Sbjct: 90 VSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKA 149
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
CA E G+ +H +G + +V+V N L+++Y + G E +V + M R VSW
Sbjct: 150 CAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSW 209
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR 222
+S+ L A GLVD+ RAL M
Sbjct: 210 NSL-----------------------------------LSAYLEKGLVDEARALFDEMEE 234
Query: 223 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALL 269
VE + ++ + AG ++EA+EV +M V + V W A++
Sbjct: 235 R-----NVESWNFMISGYAAAGLVKEAKEVFDSMPV-RDVVSWNAMV 275
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 244 bits (624), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 132/356 (37%), Positives = 191/356 (53%), Gaps = 1/356 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++ YA CG+ A+ FD+M +DI W +I+ +G + AA LF MP++N SW
Sbjct: 220 IIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSW 279
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
T++I G + G AL +F +M G KP + T + L A A + L GK +H +
Sbjct: 280 TALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIR 339
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER-TVVSWSSMIVGFAMHXXXXXXXX 180
N V ++LIDMY K G LE RVF ++ V W++MI A H
Sbjct: 340 TNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALR 399
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
MI+ ++PN T + +L+ACSH GLV++G M +GIVP EHY CL+DLL
Sbjct: 400 MLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLL 459
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYV 300
RAG +E I M P++ +W A+LG CR+H N L ++A L KLD + Y+
Sbjct: 460 GRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYI 519
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAK 356
++S++YA+ GKWE V ++R +MK R V K S I I+ V F D +H A+
Sbjct: 520 LLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHAR 575
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 152/348 (43%), Gaps = 39/348 (11%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y CG+ A +FD+M R++ +WN M++ + G + AR +F SMP+R+V SW
Sbjct: 88 LIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSW 147
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+++ G A+ G EAL + E + G K NE + +L AC + L+ + H
Sbjct: 148 NTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLV 207
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR-------------------------- 155
GFL NV + ++ID Y KCG +E R F+ M
Sbjct: 208 AGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKL 267
Query: 156 -----ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
E+ VSW+++I G+ MI +G+KP TF L A + + +
Sbjct: 268 FCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASL 327
Query: 211 DKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
G+ + M R + P L+D+ S++G LE + V + V W ++
Sbjct: 328 RHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMIS 386
Query: 271 GCRLHKNIVLAEEAMRHLSKLDLL----NDGYYVVMSNVYAEAGKWEE 314
H L +A+R L + N VV+ N + +G EE
Sbjct: 387 ALAQHG---LGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEE 431
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 124/321 (38%), Gaps = 59/321 (18%)
Query: 76 EALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGF----------- 124
+A+ + + G + + ++L C L+ GK +HR K GF
Sbjct: 29 QAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHL 88
Query: 125 ---------------------LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWS 163
LRN+Y N ++ YVK G L VF+ M ER VVSW+
Sbjct: 89 IGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWN 148
Query: 164 SMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRD 223
+M++G+A R G+K N +F G+L AC K R L + R+
Sbjct: 149 TMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACV------KSRQ-LQLNRQA 201
Query: 224 YGIV------PGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKN 277
+G V V ++D ++ G++E A+ M+V + +W L+ G +
Sbjct: 202 HGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTV-KDIHIWTTLISG---YAK 257
Query: 278 IVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPG----- 332
+ E A + ++ N + + Y G + R M + GVK
Sbjct: 258 LGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSC 317
Query: 333 -CSSITIDGVVHEFVAGDETH 352
C+S +I + H G E H
Sbjct: 318 LCASASIASLRH----GKEIH 334
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/315 (40%), Positives = 186/315 (59%), Gaps = 2/315 (0%)
Query: 39 NVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVA 98
+ G V A +F MP+RNV SWT++I G A+ + LK++S+M K S PN+ T A
Sbjct: 167 DSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTA 226
Query: 99 VLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERT 158
+L AC G L G+SVH G +++ N+LI MY KCG L++ +R+F+ +
Sbjct: 227 LLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKD 286
Query: 159 VVSWSSMIVGFAMHXXXXXXXXXXXXMI-RVGMKPNYVTFIGVLHACSHVGLVDKGRALL 217
VVSW+SMI G+A H M+ + G KP+ +T++GVL +C H GLV +GR
Sbjct: 287 VVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFF 346
Query: 218 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKN 277
+M ++G+ P + HY CLVDLL R G L+EA E+I NM + PN V+WG+LL CR+H +
Sbjct: 347 NLM-AEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGD 405
Query: 278 IVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSIT 337
+ A L+ +V ++N+YA G W+E + +R+LMK +G+K PGCS I
Sbjct: 406 VWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIE 465
Query: 338 IDGVVHEFVAGDETH 352
I+ V F A D ++
Sbjct: 466 INNYVFMFKAEDGSN 480
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 133/302 (44%), Gaps = 16/302 (5%)
Query: 82 SEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKC 141
S +++DG + + + + +C D G H A GF+ +VY+ ++L+ +Y
Sbjct: 109 SSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDS 168
Query: 142 GCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVL 201
G +E Y+VFE M ER VVSW++MI GFA M + PN TF +L
Sbjct: 169 GEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALL 228
Query: 202 HACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPN 261
AC+ G + +GR+ + G+ + L+ + + G L++A + S +
Sbjct: 229 SACTGSGALGQGRS-VHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS-NKD 286
Query: 262 RVVWGALLGGCRLH----KNIVLAEEAM-RHLSKLDLLNDGYYVVMSNVYAEAGKWEEVS 316
V W +++ G H + I L E M + +K D + Y V+S+ AG +E
Sbjct: 287 VVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAIT--YLGVLSSC-RHAGLVKEGR 343
Query: 317 RIRRLMKSRGVKKTPGCSSITID-----GVVHEFVAGDETHPQAKGIFEMWEKLLVKMKM 371
+ LM G+K S +D G++ E + E P +W LL ++
Sbjct: 344 KFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSV-IWGSLLFSCRV 402
Query: 372 KG 373
G
Sbjct: 403 HG 404
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 76/173 (43%), Gaps = 33/173 (19%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y CG+ + A +FD+ +D+ +WN MIA
Sbjct: 262 LISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIA-------------------------- 295
Query: 62 TSVIYGLAKCGMCEEALKVFS-EMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
G A+ G+ +A+++F M K G+KP+ +T + VL +C G ++ G+
Sbjct: 296 -----GYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMA 350
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER-TVVSWSSMIVGFAMH 172
+G + + L+D+ + G L+E + E M + V W S++ +H
Sbjct: 351 EHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVH 403
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 242 bits (618), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 133/368 (36%), Positives = 199/368 (54%), Gaps = 1/368 (0%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G+ HA++ + ++I + ++ G + A LF S+ R++ W ++I G
Sbjct: 127 GKRIHAQMFVVGFALNEYLKVKLLILYALS-GDLQTAGILFRSLKIRDLIPWNAMISGYV 185
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
+ G+ +E L ++ +M ++ P++ T +V AC+ L LE GK H N+
Sbjct: 186 QKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNII 245
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
V +AL+DMY KC +G+RVF+ + R V++W+S+I G+ H M G
Sbjct: 246 VDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEG 305
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
+PN VTF+ VL AC+H GLVDKG M+RDYGI P +HY +VD L RAGRL+EA
Sbjct: 306 CRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEA 365
Query: 250 REVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEA 309
E + + VWG+LLG CR+H N+ L E A +LD N G YVV +N YA
Sbjct: 366 YEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASC 425
Query: 310 GKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKM 369
G E S++RR M++ GVKK PG S I + G VH F+ D +H ++ I++ ++
Sbjct: 426 GLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSFF 485
Query: 370 KMKGYIPD 377
Y PD
Sbjct: 486 MDIDYYPD 493
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 92/230 (40%), Gaps = 7/230 (3%)
Query: 50 FSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDL 109
F QR + GL G +EA+ + + G + T +L C Q +
Sbjct: 68 FQVENQRKTEKLDKTLKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEY 124
Query: 110 EFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGF 169
GK +H GF N Y+ L+ +Y G L+ +F ++ R ++ W++MI G+
Sbjct: 125 TKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGY 184
Query: 170 AMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKG-RALLTIMRRDYGIVP 228
M + + P+ TF V ACS + ++ G RA +++R I
Sbjct: 185 VQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKR--CIKS 242
Query: 229 GVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNI 278
+ LVD+ + + V +S N + W +L+ G H +
Sbjct: 243 NIIVDSALVDMYFKCSSFSDGHRVFDQLST-RNVITWTSLISGYGYHGKV 291
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 130/342 (38%), Positives = 189/342 (55%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + A +F S + + S T ++ GLA+ G EEA++ F M + G + + V AVL
Sbjct: 305 GSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVL 364
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
L GK +H F N +V N LI+MY KCG L + VF M +R V
Sbjct: 365 GVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYV 424
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
SW+SMI FA H M + +KP VTF+ +LHACSHVGL+DKGR LL M
Sbjct: 425 SWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEM 484
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
+ +GI P EHY C++D+L RAG L+EA+ I ++ + P+ +W ALLG C H + +
Sbjct: 485 KEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEV 544
Query: 281 AEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDG 340
E A L + + +++++N+Y+ GKW+E ++ + MK+ GV K G SSI I+
Sbjct: 545 GEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEH 604
Query: 341 VVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVL 382
H FV D+ HPQA+ I+++ L M +GY PD +L
Sbjct: 605 KTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRPDKRFIL 646
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 134/273 (49%), Gaps = 8/273 (2%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
++I+ N +I G + R +F M RNV + T+VI GL + + E+ L++FS
Sbjct: 187 DKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSL 246
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M + PN VT ++ L AC+ + G+ +H G + + +AL+DMY KCG
Sbjct: 247 MRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGS 306
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMK--PNYVT-FIGV 200
+E+ + +FE E VS + ++VG A + M++ G++ N V+ +GV
Sbjct: 307 IEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGV 366
Query: 201 LHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPP 260
+ +GL + +L +++R + V + L+++ S+ G L +++ V M
Sbjct: 367 SFIDNSLGLGKQLHSL--VIKRKFSGNTFVNN--GLINMYSKCGDLTDSQTVFRRMP-KR 421
Query: 261 NRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDL 293
N V W +++ H + + A + ++ L++
Sbjct: 422 NYVSWNSMIAAFARHGHGLAALKLYEEMTTLEV 454
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 2/231 (0%)
Query: 27 IATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEK 86
+ WN +++ G + A LF MP R+V S V YG + E + M
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG 149
Query: 87 DGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEE 146
G + T+ VL C K +H A +G+ + + V N LI Y KCGC
Sbjct: 150 SGGF-DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVS 208
Query: 147 GYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSH 206
G VF+GM R V++ +++I G + M R + PN VT++ L ACS
Sbjct: 209 GRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSG 268
Query: 207 VGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS 257
+ +G+ + ++ + YGI + L+D+ S+ G +E+A + + +
Sbjct: 269 SQRIVEGQQIHALLWK-YGIESELCIESALMDMYSKCGSIEDAWTIFESTT 318
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 32/154 (20%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+++Y+ CG+ ++ +F +MP+R+ +WN MIA G
Sbjct: 398 LINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHG-------------------- 437
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKS-VHRFAK 120
+GLA ALK++ EM KP +VT +++L AC+ +G ++ G+ ++ +
Sbjct: 438 ----HGLA-------ALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKE 486
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM 154
+G +IDM + G L+E + +
Sbjct: 487 VHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSL 520
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/464 (31%), Positives = 239/464 (51%), Gaps = 21/464 (4%)
Query: 8 SCGETRHARLMFD-------KMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS 60
+C + RH R + + + ++ N ++ + V A ++ SM +R+ +
Sbjct: 436 ACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNIT 495
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
+TS++ + G E AL V + M DG + +++++ + A A LG LE GK +H ++
Sbjct: 496 YTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSV 555
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
+GF V N+L+DMY KCG LE+ +VFE + VVSW+ ++ G A +
Sbjct: 556 KSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALS 615
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M +P+ VTF+ +L ACS+ L D G +M++ Y I P VEHY LV +L
Sbjct: 616 AFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGIL 675
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYV 300
RAGRLEEA V+ M + PN +++ LL CR N+ L E+ L + Y+
Sbjct: 676 GRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYI 735
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETH-PQAKGIF 359
+++++Y E+GK E + R LM + + K G S++ + G VH FV+ D T + GI+
Sbjct: 736 LLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIY 795
Query: 360 EMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRI 419
E + ++K G + F HS K A+VYG I P + +
Sbjct: 796 AEIESIKEEIKRFG----------SPYRGNENASF---HSAKQAVVYGFIYASPEAPVHV 842
Query: 420 MKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCK 463
+KN +C+DCH +++ + +++I VRD N+ H FK+G C+CK
Sbjct: 843 VKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSCK 886
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 112/228 (49%), Gaps = 7/228 (3%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR LF M R V +WT +I K AL +F EM G+ PNE T +V+ +CA
Sbjct: 77 ARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAG 136
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
L D+ +G VH GF N V ++L D+Y KCG +E +F ++ +SW+ M
Sbjct: 137 LRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMM 196
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT--IMRRD 223
I M++ G+ PN TF+ +L A S +GL + G+ + + I+R
Sbjct: 197 ISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-EFGKTIHSNIIVR-- 253
Query: 224 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
GI V LVD S+ ++E+A V+ N S + +W +++ G
Sbjct: 254 -GIPLNVVLKTSLVDFYSQFSKMEDAVRVL-NSSGEQDVFLWTSVVSG 299
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 112/236 (47%), Gaps = 4/236 (1%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G A +LFSS+ + SWT +I L EAL+ +SEM K G PNE T V +L
Sbjct: 173 GQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLL 232
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
A + LG LEFGK++H G NV + +L+D Y + +E+ RV E+ V
Sbjct: 233 GASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVF 291
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
W+S++ GF + M +G++PN T+ +L CS V +D G+ + +
Sbjct: 292 LWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQT 351
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLE-EAREVIANMSVPPNRVVWGALLGGCRLH 275
+ G + LVD+ + E EA V M V PN V W L+ G H
Sbjct: 352 IK-VGFEDSTDVGNALVDMYMKCSASEVEASRVFGAM-VSPNVVSWTTLILGLVDH 405
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 123/251 (49%), Gaps = 9/251 (3%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G+T H+ ++ +P ++ ++ + A + +S +++V WTSV+ G
Sbjct: 243 GKTIHSNIIVRGIPL-NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFV 301
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
+ +EA+ F EM G +PN T A+L C+ + L+FGK +H GF +
Sbjct: 302 RNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTD 361
Query: 130 VCNALIDMYVKCGCLE-EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRV 188
V NAL+DMY+KC E E RVF M VVSW+++I+G H M++
Sbjct: 362 VGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKR 421
Query: 189 GMKPNYVTFIGVLHACS---HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGR 245
++PN VT GVL ACS HV V + A L D +V G LVD + + +
Sbjct: 422 EVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVG----NSLVDAYASSRK 477
Query: 246 LEEAREVIANM 256
++ A VI +M
Sbjct: 478 VDYAWNVIRSM 488
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 106/226 (46%), Gaps = 2/226 (0%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A +F +M NV SWT++I GL G ++ + EM K +PN VT+ VL AC++
Sbjct: 380 ASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSK 439
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
L + +H + + V N+L+D Y ++ + V M+ R ++++S+
Sbjct: 440 LRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSL 499
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
+ F M G++ + ++ G + A +++G ++ G+ L + G
Sbjct: 500 VTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKS-G 558
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
LVD+ S+ G LE+A++V ++ P+ V W L+ G
Sbjct: 559 FSGAASVLNSLVDMYSKCGSLEDAKKVFEEIAT-PDVVSWNGLVSG 603
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 96/243 (39%), Gaps = 61/243 (25%)
Query: 123 GFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXX 182
G L N+ +CN L+ +Y+K + ++F+ M RTV +W+ MI F
Sbjct: 53 GLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLF 112
Query: 183 XXMIRVGMKPNYVTFIGVLHACSHVGLVD---KGRALLTIMRRDYGIVPGVEHYG-CLVD 238
M+ G PN TF V+ +C+ GL D GR ++++ + G G L D
Sbjct: 113 EEMMASGTHPNEFTFSSVVRSCA--GLRDISYGGRVHGSVIKTGF---EGNSVVGSSLSD 167
Query: 239 LLSRAGRLEEAREVIANMS----------------------------------VPPNRVV 264
L S+ G+ +EA E+ +++ VPPN
Sbjct: 168 LYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFT 227
Query: 265 WGALLG---------GCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEV 315
+ LLG G +H NI++ + + K L+ + Y++ K E+
Sbjct: 228 FVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLV---------DFYSQFSKMEDA 278
Query: 316 SRI 318
R+
Sbjct: 279 VRV 281
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 193/325 (59%), Gaps = 5/325 (1%)
Query: 17 LMFDKMPQRDIATWNIMIAHLINV----GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCG 72
L FD Q + I+ LI++ G + AR LF MP+R + SW S+I G ++ G
Sbjct: 237 LGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNG 296
Query: 73 MCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCN 132
EEAL +F +M G P++VT ++V+ A G + G+S+H + GF+++ +
Sbjct: 297 DAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVC 356
Query: 133 ALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG-MK 191
AL++MY K G E + FE + ++ ++W+ +I+G A H M G
Sbjct: 357 ALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNAT 416
Query: 192 PNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEARE 251
P+ +T++GVL+ACSH+GLV++G+ MR +G+ P VEHYGC+VD+LSRAGR EEA
Sbjct: 417 PDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAER 476
Query: 252 VIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGK 311
++ M V PN +WGALL GC +H+N+ L + +++ + L G YV++SN+YA+AG+
Sbjct: 477 LVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGR 536
Query: 312 WEEVSRIRRLMKSRGVKKTPGCSSI 336
W +V IR MKS+ V K G SS+
Sbjct: 537 WADVKLIRESMKSKRVDKVLGHSSV 561
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 162/370 (43%), Gaps = 79/370 (21%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LLH+Y CGE + +F+ +PQ ++ W +I+ +N + FS
Sbjct: 148 LLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVN-------NNRFS---------- 190
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+A++ F EM+ +G K NE +V +LVAC + D+ GK H F +G
Sbjct: 191 --------------DAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQG 236
Query: 122 NGFLR--------NVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHX 173
GF NV + +LIDMY KCG L +F+GM ERT+VSW+S+I G++ +
Sbjct: 237 LGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNG 296
Query: 174 XXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHY 233
M+ +G+ P+ VTF+ V+ A G G+++ + + G V
Sbjct: 297 DAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKT-GFVKDAAIV 355
Query: 234 GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH------------------ 275
LV++ ++ G E A++ ++ + + W ++ G H
Sbjct: 356 CALVNMYAKTGDAESAKKAFEDLE-KKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGN 414
Query: 276 ---------------KNIVLAEEAMRHLSKLDLLND-----GYYVVMSNVYAEAGKWEEV 315
+I L EE R+ +++ L+ +Y M ++ + AG++EE
Sbjct: 415 ATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEA 474
Query: 316 SRIRRLMKSR 325
R+ + M +
Sbjct: 475 ERLVKTMPVK 484
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 124/267 (46%), Gaps = 21/267 (7%)
Query: 38 INVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVV 97
+N+ Y AR +F S+ +V W S+I G + ++AL + EM + G P+ T
Sbjct: 55 MNLSY---ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFP 111
Query: 98 AVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER 157
VL AC+ L D++FG VH F GF N+YV L+ MY+ CG + G RVFE + +
Sbjct: 112 YVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQW 171
Query: 158 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL 217
VV+W S+I GF + M G+K N + +L AC + G+
Sbjct: 172 NVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFH 231
Query: 218 TIMRRDYGIVPGVEH--------YGCLVDLLSRAGRLEEAREVIANMSVPPNR--VVWGA 267
+ + G P + L+D+ ++ G L AR + M P R V W +
Sbjct: 232 GFL-QGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGM---PERTLVSWNS 287
Query: 268 LLGGCRLHKNIVLAEEAM-RHLSKLDL 293
++ G + + AEEA+ L LDL
Sbjct: 288 IITGYSQNGD---AEEALCMFLDMLDL 311
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/357 (37%), Positives = 203/357 (56%), Gaps = 11/357 (3%)
Query: 2 LLHLYASC---GETRHARLMFDKMPQRDIATWNIMIAHLINV----GYVGAARDLFSSMP 54
L+ + +C G+ R RL+ + + I + + LI++ G + +AR +F+ M
Sbjct: 236 LVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMI 295
Query: 55 QRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKS 114
+++ +WT++I ++ G EA K+F EMEK G P+ T+ VL AC +G LE GK
Sbjct: 296 KKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQ 355
Query: 115 VHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXX 174
+ A N+YV L+DMY KCG +EE RVFE M + +W++MI +A
Sbjct: 356 IETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGH 415
Query: 175 XXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYG 234
R+ + P+ +TFIGVL AC H GLV +G M +G+VP +EHY
Sbjct: 416 AKEALLLFD---RMSVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYT 472
Query: 235 CLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL-DL 293
++DLLSRAG L+EA E + P+ ++ A+LG C K++ + E+AMR L ++ +
Sbjct: 473 NIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEA 532
Query: 294 LNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDE 350
N G YV+ SNV A+ W+E +++R LM+ RGV KTPGCS I I+G + EF+AG +
Sbjct: 533 KNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSD 589
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 136/260 (52%), Gaps = 3/260 (1%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G + H+ L F +RD+ + +I G VG AR LF + +R+ SW S+I G +
Sbjct: 151 GRSVHSSL-FKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYS 209
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
+ G ++A+ +F +ME++G +P+E T+V++L AC+ LGDL G+ + A + +
Sbjct: 210 EAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTF 269
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
+ + LI MY KCG L+ RVF M ++ V+W++MI ++ + M + G
Sbjct: 270 LGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTG 329
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
+ P+ T VL AC VG ++ G+ + T + + + LVD+ + GR+EEA
Sbjct: 330 VSPDAGTLSTVLSACGSVGALELGKQIET-HASELSLQHNIYVATGLVDMYGKCGRVEEA 388
Query: 250 REVIANMSVPPNRVVWGALL 269
V M V N W A++
Sbjct: 389 LRVFEAMPV-KNEATWNAMI 407
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 127/269 (47%), Gaps = 3/269 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L L C R + +M + N +I + +G + LFS + N S+
Sbjct: 40 FLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSF 99
Query: 62 TSVIYGLAKC-GMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
+I GL E AL ++ M+ G KP++ T V +ACA+L ++ G+SVH
Sbjct: 100 NYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLF 159
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
G R+V++ ++LI MY KCG + ++F+ + ER VSW+SMI G++
Sbjct: 160 KVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMD 219
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M G +P+ T + +L ACSH+G + GR LL M I L+ +
Sbjct: 220 LFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGR-LLEEMAITKKIGLSTFLGSKLISMY 278
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALL 269
+ G L+ AR V M + +RV W A++
Sbjct: 279 GKCGDLDSARRVFNQM-IKKDRVAWTAMI 306
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/327 (37%), Positives = 192/327 (58%), Gaps = 2/327 (0%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME-KDGSKPNEVTVVAVLVACA 104
A +FS +P+++V SW ++I G GM +++ FS M ++ ++P+ + +V VL +C+
Sbjct: 318 AYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCS 377
Query: 105 QLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSS 164
+LG LE K H + GF N ++ +L+++Y +CG L +VF G+ + V W+S
Sbjct: 378 ELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTS 437
Query: 165 MIVGFAMHXXXXXXXXXXXXMIRVG-MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRD 223
+I G+ +H M++ +KPN VTF+ +L ACSH GL+ +G + +M D
Sbjct: 438 LITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVND 497
Query: 224 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEE 283
Y + P +EHY LVDLL R G L+ A E+ M P + G LLG CR+H+N +AE
Sbjct: 498 YRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAET 557
Query: 284 AMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVH 343
+ L +L+ + GYY++MSNVY G+WE V ++R +K RG+KK S I I VH
Sbjct: 558 VAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVH 617
Query: 344 EFVAGDETHPQAKGIFEMWEKLLVKMK 370
FVA DE HP+ + ++ + ++L + MK
Sbjct: 618 RFVADDELHPEKEPVYGLLKELDLHMK 644
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 144/280 (51%), Gaps = 5/280 (1%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A +LF + +++V SW++VI + G EAL VF++M DG++PN TV+ VL ACA
Sbjct: 217 AVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAA 276
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
DLE G+ H A G V V AL+DMY+KC EE Y VF + + VVSW ++
Sbjct: 277 AHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVAL 336
Query: 166 IVGFAMHXXXXXXXXXXXXM-IRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDY 224
I GF ++ M + +P+ + + VL +CS +G +++ + + + + Y
Sbjct: 337 ISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIK-Y 395
Query: 225 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEA 284
G LV+L SR G L A +V +++ + VVW +L+ G +H A E
Sbjct: 396 GFDSNPFIGASLVELYSRCGSLGNASKVFNGIAL-KDTVVWTSLITGYGIHGKGTKALET 454
Query: 285 MRHLSKLDLL--NDGYYVVMSNVYAEAGKWEEVSRIRRLM 322
H+ K + N+ ++ + + + AG E RI +LM
Sbjct: 455 FNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLM 494
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 128/268 (47%), Gaps = 5/268 (1%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
GE H + D D+ + +I I G + A +F + + ++ +W+S++ G
Sbjct: 79 GEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFE 138
Query: 70 KCGMCEEALKVFSEM-EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNV 128
K G +A++ F M P+ VT++ ++ AC +L + G+ VH F GF ++
Sbjct: 139 KNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDL 198
Query: 129 YVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRV 188
+ N+L++ Y K +E +F+ + E+ V+SWS++I + + M+
Sbjct: 199 SLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDD 258
Query: 189 GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEE 248
G +PN T + VL AC+ +++GR + R G+ V+ LVD+ + EE
Sbjct: 259 GTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK-GLETEVKVSTALVDMYMKCFSPEE 317
Query: 249 AREVIANMSVPPNRVV-WGALLGGCRLH 275
A V + +P VV W AL+ G L+
Sbjct: 318 AYAVFSR--IPRKDVVSWVALISGFTLN 343
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 147/303 (48%), Gaps = 17/303 (5%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR +F M +R++ W +++ L++ EE L FS M +D KP+ T+ L AC +
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 106 LGDLEFGKSVHRFAKGNGFL-RNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSS 164
L ++ +G+ +H F K + L ++YV ++LI MY+KCG + E R+F+ + + +V+WSS
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 165 MIVGFAMHXXXXXXXXXXXXMIRVG-MKPNYVTFIGVLHACSHVGLVDKGRALLT-IMRR 222
M+ GF + M+ + P+ VT I ++ AC+ + GR + ++RR
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 223 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAE 282
G + L++ +++ +EA + M + + W ++ C + A
Sbjct: 193 --GFSNDLSLVNSLLNCYAKSRAFKEAVNLF-KMIAEKDVISWSTVI-ACYVQNGA--AA 246
Query: 283 EAMRHLSKLDLLNDGYYVVMSNVY------AEAGKWEEVSRIRRLMKSRGVKKTPGCSSI 336
EA+ + D+++DG ++ V A A E+ + L +G++ S+
Sbjct: 247 EALLVFN--DMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTA 304
Query: 337 TID 339
+D
Sbjct: 305 LVD 307
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 124/293 (42%), Positives = 168/293 (57%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR LF + RNV WT++I G AKC EA +F +M ++ PN+ T+ A+LV+C+
Sbjct: 265 ARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSS 324
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
LG L GKSVH + NG + + IDMY +CG ++ VF+ M ER V+SWSSM
Sbjct: 325 LGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSM 384
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
I F ++ M + PN VTF+ +L ACSH G V +G M RDYG
Sbjct: 385 INAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYG 444
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
+VP EHY C+VDLL RAG + EA+ I NM V P WGALL CR+HK + LA E
Sbjct: 445 VVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIA 504
Query: 286 RHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITI 338
L ++ YV++SN+YA+AG WE V+ +RR M +G +K G S+ +
Sbjct: 505 EKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 127/258 (49%), Gaps = 6/258 (2%)
Query: 39 NVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVA 98
+G + +A+ +F +P RN W ++ G K E ++F M G + +T++
Sbjct: 156 QLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLIC 215
Query: 99 VLVACAQLGDLEFGKSVHRFAKGNGFL-RNVYVCNALIDMYVKCGCLEEGYRVFEGMRER 157
++ AC + + GK VH + F+ ++ Y+ ++IDMYVKC L+ ++FE +R
Sbjct: 216 LVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDR 275
Query: 158 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL 217
VV W+++I GFA M+R + PN T +L +CS +G + G+++
Sbjct: 276 NVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVH 335
Query: 218 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKN 277
M R+ GI ++ +D+ +R G ++ AR V +M N + W +++ ++
Sbjct: 336 GYMIRN-GIEMDAVNFTSFIDMYARCGNIQMARTVF-DMMPERNVISWSSMINAFGING- 392
Query: 278 IVLAEEAMRHLSKLDLLN 295
L EEA+ K+ N
Sbjct: 393 --LFEEALDCFHKMKSQN 408
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 115/253 (45%), Gaps = 5/253 (1%)
Query: 46 ARDLFSSMP--QRNVRSWTSVIYGLAKCGMC--EEALKVFSEMEKDGSKPNEVTVVAVLV 101
A F+ +P +RN SW +++ G +K C + L +++ M + + +V +
Sbjct: 58 ATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIK 117
Query: 102 ACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVS 161
AC LG LE G +H A NG ++ YV +L++MY + G +E +VF+ + R V
Sbjct: 118 ACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVL 177
Query: 162 WSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMR 221
W ++ G+ + M G+ + +T I ++ AC +V G+ + +
Sbjct: 178 WGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSI 237
Query: 222 RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLA 281
R I ++D+ + L+ AR++ SV N V+W L+ G + V A
Sbjct: 238 RRSFIDQSDYLQASIIDMYVKCRLLDNARKLFET-SVDRNVVMWTTLISGFAKCERAVEA 296
Query: 282 EEAMRHLSKLDLL 294
+ R + + +L
Sbjct: 297 FDLFRQMLRESIL 309
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 83/174 (47%), Gaps = 10/174 (5%)
Query: 7 ASCGETRHARLMFDKMPQRDIATWNIMIAHLINV----GYVGAARDLFSSMPQRNVRSWT 62
+S G RH + + M + I + I++ G + AR +F MP+RNV SW+
Sbjct: 323 SSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWS 382
Query: 63 SVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG-KSVHRFAKG 121
S+I G+ EEAL F +M+ PN VT V++L AC+ G+++ G K +
Sbjct: 383 SMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRD 442
Query: 122 NGFL--RNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVS-WSSMIVGFAMH 172
G + Y C ++D+ + G + E + M + + S W +++ +H
Sbjct: 443 YGVVPEEEHYAC--MVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIH 494
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 238 bits (607), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 125/336 (37%), Positives = 184/336 (54%), Gaps = 31/336 (9%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ YA+CG+ R AR +F+++ + D+ATWN ++A N + +
Sbjct: 156 LVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSD--------------- 200
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
EE L +F M+ +PNE+++VA++ +CA LG+ G H +
Sbjct: 201 -------------EEVLLLFMRMQ---VRPNELSLVALIKSCANLGEFVRGVWAHVYVLK 244
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
N N +V +LID+Y KCGCL +VF+ M +R V +++MI G A+H
Sbjct: 245 NNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIEL 304
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
+I G+ P+ TF+ + ACSH GLVD+G + M+ YGI P VEHYGCLVDLL
Sbjct: 305 YKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLG 364
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
R+GRLEEA E I M V PN +W + LG + H + E A++HL L+ N G YV+
Sbjct: 365 RSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVL 424
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSIT 337
+SN+YA +W +V + R LMK V K+PG S++
Sbjct: 425 LSNIYAGVNRWTDVEKTRELMKDHRVNKSPGISTLN 460
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 238 bits (606), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 128/381 (33%), Positives = 208/381 (54%), Gaps = 4/381 (1%)
Query: 8 SCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYG 67
+ G+ HA ++ + Q ++ N ++ GY+ A+ F M +++ +W ++I
Sbjct: 230 TTGKQIHASVI-KRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISE 288
Query: 68 LAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRN 127
L + EAL +F E G PN T +++ ACA + L G+ +H GF +N
Sbjct: 289 LERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKN 347
Query: 128 VYVCNALIDMYVKCGCLEEGYRVF-EGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI 186
V + NALIDMY KCG + + RVF E + R +VSW+SM++G+ H M+
Sbjct: 348 VELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMV 407
Query: 187 RVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRL 246
G++P+ + F+ VL AC H GLV+KG +M +YGI P + Y C+VDLL RAG++
Sbjct: 408 SSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKI 467
Query: 247 EEAREVIANMSVPPNRVVWGALLGGCRLHK-NIVLAEEAMRHLSKLDLLNDGYYVVMSNV 305
EA E++ M P+ WGA+LG C+ HK N +++ A R + +L G YV++S +
Sbjct: 468 GEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYI 527
Query: 306 YAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKL 365
YA GKW + +R+R++M+ G KK G S I ++ V F D+ P A ++ + L
Sbjct: 528 YAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLL 587
Query: 366 LVKMKMKGYIPDTSVVLLDLE 386
+ + + GY+P+ ++ D E
Sbjct: 588 IEETREAGYVPELDSLVNDQE 608
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 115/251 (45%), Gaps = 6/251 (2%)
Query: 21 KMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKV 80
K + I N+++++ G V AR LF MP R+V +WT++I G A A +
Sbjct: 40 KPKKHHILATNLIVSYF-EKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWEC 98
Query: 81 FSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVK 140
F EM K G+ PNE T+ +VL +C + L +G VH G ++YV NA+++MY
Sbjct: 99 FHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYAT 158
Query: 141 CG-CLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIG 199
C +E +F ++ + V+W+++I GF M+ +
Sbjct: 159 CSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI 218
Query: 200 VLHACSHVGLVDKGRAL-LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSV 258
+ A + + V G+ + ++++R G + ++DL R G L EA+ M
Sbjct: 219 AVRASASIDSVTTGKQIHASVIKR--GFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME- 275
Query: 259 PPNRVVWGALL 269
+ + W L+
Sbjct: 276 DKDLITWNTLI 286
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/370 (32%), Positives = 203/370 (54%), Gaps = 2/370 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQR-DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS 60
LL YA CG +A +F + +R + ++N +++ +N G A+ LF+ M ++ +
Sbjct: 476 LLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTT 535
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
W+ ++ A+ EA+ VF E++ G +PN VT++ +L CAQL L + H +
Sbjct: 536 WSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYII 595
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
G L ++ + L+D+Y KCG L+ Y VF+ R +V +++M+ G+A+H
Sbjct: 596 RGG-LGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALM 654
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M +KP++V +L AC H GL+ G + +R +G+ P +E Y C VDL+
Sbjct: 655 IYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLI 714
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYV 300
+R GRL++A + M V PN +WG LL C + + L HL + + + G +V
Sbjct: 715 ARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHV 774
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFE 360
++SN+YA KWE V +R LMK + +KK GCS + +DG + FV+GD +HP+ IF+
Sbjct: 775 LISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFD 834
Query: 361 MWEKLLVKMK 370
+ L ++MK
Sbjct: 835 LVNALYLQMK 844
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 117/276 (42%), Gaps = 40/276 (14%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
+L++YA C + MF +M D WNI
Sbjct: 62 VLNMYAKCRRMDDCQKMFRQMDSLDPVVWNI----------------------------- 92
Query: 62 TSVIYGLA-KCGMCEEALKVFSEME-KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
V+ GL+ CG E ++ F M D KP+ VT VL C +LGD GKS+H +
Sbjct: 93 --VLTGLSVSCG--RETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYI 148
Query: 120 KGNGFLRNVYVCNALIDMYVKCG-CLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXX 178
G ++ V NAL+ MY K G + Y F+G+ ++ VVSW+++I GF+ +
Sbjct: 149 IKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADA 208
Query: 179 XXXXXXMIRVGMKPNYVTFIGVLHACSHVG---LVDKGRALLTIMRRDYGIVPGVEHYGC 235
M++ +PNY T VL C+ + GR + + + + + V
Sbjct: 209 FRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNS 268
Query: 236 LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
LV R GR+EEA + M + V W ++ G
Sbjct: 269 LVSFYLRVGRIEEAASLFTRMG-SKDLVSWNVVIAG 303
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 149/328 (45%), Gaps = 17/328 (5%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G H+ ++ Q + N +++ + VG + A LF+ M +++ SW VI G A
Sbjct: 246 GRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYA 305
Query: 70 KCGMCEEALKVFSEMEKDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL-RN 127
+A ++F + G P+ VT++++L CAQL DL GK +H + + +L +
Sbjct: 306 SNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLED 365
Query: 128 VYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR 187
V NALI Y + G Y F M + ++SW++++ FA ++
Sbjct: 366 TSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLN 425
Query: 188 VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHY-------GCLVDLL 240
+ + VT + +L C +V + K + + Y + G+ H L+D
Sbjct: 426 EAITLDSVTILSLLKFCINVQGIGKVKEV-----HGYSVKAGLLHDEEEPKLGNALLDAY 480
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYV 300
++ G +E A ++ +S V + +LL G + N ++A +++ + +
Sbjct: 481 AKCGNVEYAHKIFLGLSERRTLVSYNSLLSG---YVNSGSHDDAQMLFTEMSTTDLTTWS 537
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVK 328
+M +YAE+ E + R +++RG++
Sbjct: 538 LMVRIYAESCCPNEAIGVFREIQARGMR 565
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 128/266 (48%), Gaps = 8/266 (3%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGA-ARDLFSSMPQRNVRSWTSVIYGL 68
G++ H+ ++ + ++D N +++ G++ A F + ++V SW ++I G
Sbjct: 141 GKSMHSYIIKAGL-EKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGF 199
Query: 69 AKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGD---LEFGKSVHRFAKGNGFL 125
++ M +A + F M K+ ++PN T+ VL CA + G+ +H + +L
Sbjct: 200 SENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWL 259
Query: 126 R-NVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXX 184
+ +V+VCN+L+ Y++ G +EE +F M + +VSW+ +I G+A +
Sbjct: 260 QTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHN 319
Query: 185 MIRVG-MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRA 243
++ G + P+ VT I +L C+ + + G+ + + + R ++ L+ +R
Sbjct: 320 LVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARF 379
Query: 244 GRLEEAREVIANMSVPPNRVVWGALL 269
G A + MS + + W A+L
Sbjct: 380 GDTSAAYWAFSLMST-KDIISWNAIL 404
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 192/340 (56%), Gaps = 2/340 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ Y G+ AR +F+ M ++ MI+ +N G+V A ++F++ +++ +
Sbjct: 181 LVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVY 240
Query: 62 TSVIYGLAKCG-MCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
+++ G ++ G + ++ ++ M++ G PN T +V+ AC+ L E G+ VH
Sbjct: 241 NAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIM 300
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
+G ++ + ++L+DMY KCG + + RVF+ M+E+ V SW+SMI G+ +
Sbjct: 301 KSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALE 360
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M ++PNYVTF+G L ACSH GLVDKG + M+RDY + P +EHY C+VDL+
Sbjct: 361 LFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLM 420
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDL-LNDGYY 299
RAG L +A E M P+ +W ALL C LH N+ LA A L KL+ G Y
Sbjct: 421 GRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAY 480
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITID 339
+ +SNVYA KW+ VS+IR +MK R + KT G S + D
Sbjct: 481 LALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWTSED 520
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 139/307 (45%), Gaps = 33/307 (10%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVG-------------YVGAARD 48
LL L+ CG +AR +FD++P+ ++ +N MI+ + G Y G D
Sbjct: 75 LLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKAD 134
Query: 49 LFS-SMPQRNVRS-WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQL 106
++ SM + S +++I + C + V + + K + ++V + A++ +
Sbjct: 135 GYTLSMVLKASNSRGSTMILPRSLCRL------VHARIIKCDVELDDVLITALVDTYVKS 188
Query: 107 GDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMI 166
G LE ++V K NV C ++I Y+ G +E+ +F + + +V +++M+
Sbjct: 189 GKLESARTVFETMKD----ENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMV 244
Query: 167 VGFAMH-XXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL-LTIMRRDY 224
GF+ M R G PN TF V+ ACS + + G+ + IM+
Sbjct: 245 EGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKS-- 302
Query: 225 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEA 284
G+ ++ L+D+ ++ G + +AR V M N W +++ G + N EEA
Sbjct: 303 GVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQ-EKNVFSWTSMIDGYGKNGN---PEEA 358
Query: 285 MRHLSKL 291
+ +++
Sbjct: 359 LELFTRM 365
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 234 bits (597), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 129/365 (35%), Positives = 196/365 (53%), Gaps = 34/365 (9%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRN-------- 57
Y GE A+ MFD MP+R++ +WN ++ L+ G + A+ LF MP+R+
Sbjct: 186 YVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMI 245
Query: 58 -----------------------VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEV 94
VR+W+++I G A+ G EA KVFSEM KP+E
Sbjct: 246 DGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEF 305
Query: 95 TVVAVLVACAQLGDLEFGKSVHRF--AKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE 152
+V ++ AC+Q+G E + V + + N F + YV ALIDM KCG ++ ++FE
Sbjct: 306 IMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSH-YVVPALIDMNAKCGHMDRAAKLFE 364
Query: 153 GMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDK 212
M +R +VS+ SM+ G A+H M+ G+ P+ V F +L C LV++
Sbjct: 365 EMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEE 424
Query: 213 GRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGC 272
G +MR+ Y I+ +HY C+V+LLSR G+L+EA E+I +M + WG+LLGGC
Sbjct: 425 GLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGC 484
Query: 273 RLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPG 332
LH N +AE RHL +L+ + G YV++SN+YA +W +V+ +R M G+ K G
Sbjct: 485 SLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICG 544
Query: 333 CSSIT 337
S I+
Sbjct: 545 RSWIS 549
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDG-SKPNEVTVVAVLVACAQLG 107
+F +P W +I G + + E + + M + G ++P+E T V+ C+ G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 108 DLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIV 167
+ G SVH GF ++V V + +D Y KC L +VF M ER VSW++++V
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 168 GF 169
+
Sbjct: 185 AY 186
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/311 (37%), Positives = 177/311 (56%), Gaps = 4/311 (1%)
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
SW +++ + E L++F M +P+ +T+ +L C ++ L+ G VH ++
Sbjct: 440 SWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYS 499
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
G ++ N LIDMY KCG L + R+F+ M R VVSWS++IVG+A
Sbjct: 500 LKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEAL 559
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M G++PN+VTF+GVL ACSHVGLV++G L M+ ++GI P EH C+VDL
Sbjct: 560 ILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDL 619
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY 299
L+RAGRL EA I M + P+ VVW LL C+ N+ LA++A ++ K+D N +
Sbjct: 620 LARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAH 679
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIF 359
V++ +++A +G WE + +R MK VKK PG S I I+ +H F A D HP+ I+
Sbjct: 680 VLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIY 739
Query: 360 ----EMWEKLL 366
+W ++L
Sbjct: 740 TVLHNIWSQML 750
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 143/308 (46%), Gaps = 35/308 (11%)
Query: 3 LHLYASCGETR---HARLMFDKMPQRDIATWNIMIAHLINV----GYVGAARDLFSSMPQ 55
+ L +C +R R + D + + I+ H++++ G + AR++F MP+
Sbjct: 71 ISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPE 130
Query: 56 RNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSV 115
RN+ S+TSVI G ++ G EA++++ +M ++ P++ +++ ACA D+ GK +
Sbjct: 131 RNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQL 190
Query: 116 HRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXX 175
H ++ NALI MYV+ + + RVF G+ + ++SWSS+I GF+
Sbjct: 191 HAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFE 250
Query: 176 XXXXXXXXXMIRVGM-KPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGI-------- 226
M+ G+ PN F L ACS +++R DYG
Sbjct: 251 FEALSHLKEMLSFGVFHPNEYIFGSSLKACS------------SLLRPDYGSQIHGLCIK 298
Query: 227 --VPGVEHYGC-LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEE 283
+ G GC L D+ +R G L AR V + P+ W ++ G N A+E
Sbjct: 299 SELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIAGL---ANNGYADE 354
Query: 284 AMRHLSKL 291
A+ S++
Sbjct: 355 AVSVFSQM 362
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 112/234 (47%), Gaps = 7/234 (2%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G++ +AR +F + + + SW +I GLA G +EA+ VFS+M G P+ +++ ++L
Sbjct: 319 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 378
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERT-V 159
A + L G +H + GFL ++ VCN+L+ MY C L + +FE R
Sbjct: 379 CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADS 438
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
VSW++++ H M+ +P+++T +L C + + G +
Sbjct: 439 VSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCY 498
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR--VVWGALLGG 271
+ G+ P L+D+ ++ G L +AR + +M NR V W L+ G
Sbjct: 499 SLKT-GLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMD---NRDVVSWSTLIVG 548
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 77/138 (55%), Gaps = 2/138 (1%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N +I G +G AR +F SM R+V SW+++I G A+ G EEAL +F EM+ G +
Sbjct: 512 NGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIE 571
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKG-NGFLRNVYVCNALIDMYVKCGCLEEGYR 149
PN VT V VL AC+ +G +E G ++ + +G C+ ++D+ + G L E R
Sbjct: 572 PNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAER 631
Query: 150 VFEGMR-ERTVVSWSSMI 166
+ M+ E VV W +++
Sbjct: 632 FIDEMKLEPDVVVWKTLL 649
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 115/271 (42%), Gaps = 3/271 (1%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G+ HA+++ + IA N +IA + + A +F +P +++ SW+S+I G +
Sbjct: 187 GKQLHAQVIKLESSSHLIAQ-NALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFS 245
Query: 70 KCGMCEEALKVFSEMEKDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNV 128
+ G EAL EM G PNE + L AC+ L ++G +H + N
Sbjct: 246 QLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNA 305
Query: 129 YVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRV 188
+L DMY +CG L RVF+ + SW+ +I G A + M
Sbjct: 306 IAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSS 365
Query: 189 GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEE 248
G P+ ++ +L A + + +G + + + + +G + + L+ + + L
Sbjct: 366 GFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIK-WGFLADLTVCNSLLTMYTFCSDLYC 424
Query: 249 AREVIANMSVPPNRVVWGALLGGCRLHKNIV 279
+ + + V W +L C H+ V
Sbjct: 425 CFNLFEDFRNNADSVSWNTILTACLQHEQPV 455
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 104/231 (45%), Gaps = 12/231 (5%)
Query: 65 IYGLAKCGMCEEALKVFSEMEKDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNG 123
I L K EAL+ F +K+ S K T ++++ AC+ L G+ +H +
Sbjct: 38 INSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSN 97
Query: 124 FLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXX 183
+ + N ++ MY KCG L + VF+ M ER +VS++S+I G++ +
Sbjct: 98 CKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYL 157
Query: 184 XMIRVGMKPNYVTFIGVLHAC---SHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M++ + P+ F ++ AC S VGL + A + + ++ L+ +
Sbjct: 158 KMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIA----QNALIAMY 213
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL 291
R ++ +A V + + + + W +++ G + EA+ HL ++
Sbjct: 214 VRFNQMSDASRVFYGIPM-KDLISWSSIIAG---FSQLGFEFEALSHLKEM 260
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/364 (34%), Positives = 207/364 (56%), Gaps = 4/364 (1%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLIN--VGYVGAARDLFSSMPQRNVRSWTSVIYG 67
G++ H ++ + Q AT N +I+ I G + A LF S+ +++ SW S+I G
Sbjct: 324 GKSLHGMVIKKGLEQVTSAT-NALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITG 382
Query: 68 LAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRN 127
A+ G+ E+A+K FS + K ++ A+L +C+ L L+ G+ +H A +GF+ N
Sbjct: 383 FAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSN 442
Query: 128 VYVCNALIDMYVKCGCLEEGYRVFEGMRER-TVVSWSSMIVGFAMHXXXXXXXXXXXXMI 186
+V ++LI MY KCG +E + F+ + + + V+W++MI+G+A H M
Sbjct: 443 EFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMC 502
Query: 187 RVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRL 246
+K ++VTF +L ACSH GL+ +G LL +M Y I P +EHY VDLL RAG +
Sbjct: 503 NQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLV 562
Query: 247 EEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVY 306
+A+E+I +M + P+ +V LG CR I +A + HL +++ + YV +S++Y
Sbjct: 563 NKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMY 622
Query: 307 AEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLL 366
++ KWEE + ++++MK RGVKK PG S I I V F A D ++P + I+ M + L
Sbjct: 623 SDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLT 682
Query: 367 VKMK 370
+M+
Sbjct: 683 QEMQ 686
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 121/255 (47%), Gaps = 4/255 (1%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMP-QRNVRSWTSVIYGLAKCGMCEEALKVFS 82
Q +I N MI+ + G V A+ +F + +++ SW S+I G +K + E A ++F
Sbjct: 235 QHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFI 294
Query: 83 EMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVK-- 140
+M++ + + T +L AC+ FGKS+H G + NALI MY++
Sbjct: 295 QMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFP 354
Query: 141 CGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGV 200
G +E+ +FE ++ + ++SW+S+I GFA + +K + F +
Sbjct: 355 TGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSAL 414
Query: 201 LHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPP 260
L +CS + + G+ + + + G V L+ + S+ G +E AR+ +S
Sbjct: 415 LRSCSDLATLQLGQQIHALATKS-GFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKH 473
Query: 261 NRVVWGALLGGCRLH 275
+ V W A++ G H
Sbjct: 474 STVAWNAMILGYAQH 488
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 80/144 (55%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
DI N ++ I G++G A LF MP+R+ SW ++I G CG E+A +F+ M+
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
+ GS + + +L A + + G+ VH G+ NVYV ++L+DMY KC +E
Sbjct: 94 RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVE 153
Query: 146 EGYRVFEGMRERTVVSWSSMIVGF 169
+ + F+ + E VSW+++I GF
Sbjct: 154 DAFEAFKEISEPNSVSWNALIAGF 177
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 146/368 (39%), Gaps = 87/368 (23%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQR----- 56
+L Y G +A ++FD+MP+RD +WN MI+ + G + A LF+ M +
Sbjct: 41 ILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVD 100
Query: 57 ----------------------------------NVRSWTSVIYGLAKCGMCEEALKVFS 82
NV +S++ AKC E+A + F
Sbjct: 101 GYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFK 160
Query: 83 EMEKDGSKPNEVTVVAVLVACAQLGDLEFG------------------------------ 112
E+ S+PN V+ A++ Q+ D++
Sbjct: 161 EI----SEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDP 216
Query: 113 ------KSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM-RERTVVSWSSM 165
K VH G + +CNA+I Y CG + + RVF+G+ + ++SW+SM
Sbjct: 217 MFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSM 276
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
I GF+ H M R ++ + T+ G+L ACS G++L ++ + G
Sbjct: 277 IAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKK-G 335
Query: 226 IVPGVEHYGCLVDLLSR--AGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEE 283
+ L+ + + G +E+A + ++ + + W +++ G L+E+
Sbjct: 336 LEQVTSATNALISMYIQFPTGTMEDALSLFESLK-SKDLISWNSIITG---FAQKGLSED 391
Query: 284 AMRHLSKL 291
A++ S L
Sbjct: 392 AVKFFSYL 399
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 2/157 (1%)
Query: 115 VHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXX 174
H +A G + ++YV N ++D Y+K G L +F+ M +R VSW++MI G+
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 175 XXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYG 234
M R G + +F +L + V D G + ++ + G V
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKG-GYECNVYVGS 140
Query: 235 CLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
LVD+ ++ R+E+A E +S PN V W AL+ G
Sbjct: 141 SLVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIAG 176
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 126/343 (36%), Positives = 190/343 (55%), Gaps = 2/343 (0%)
Query: 11 ETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAK 70
+ A +F+KMP +D+ +W MI G + +LF MP+++ +WT++I
Sbjct: 356 QISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVS 415
Query: 71 CGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH-RFAKGNGFLRNVY 129
G EEAL F +M + PN T +VL A A L DL G +H R K N + ++
Sbjct: 416 NGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMN-IVNDLS 474
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
V N+L+ MY KCG + Y++F + E +VS+++MI G++ + + G
Sbjct: 475 VQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSG 534
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
+PN VTF+ +L AC HVG VD G M+ Y I PG +HY C+VDLL R+G L++A
Sbjct: 535 KEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDA 594
Query: 250 REVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEA 309
+I+ M P+ VWG+LL + H + LAE A + L +L+ + YVV+S +Y+
Sbjct: 595 SNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSII 654
Query: 310 GKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETH 352
GK + RI + KS+ +KK PG S I + G VH F+AGDE+
Sbjct: 655 GKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQ 697
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 125/300 (41%), Gaps = 13/300 (4%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS 60
+LL Y G+ A +F M +++ + + M+ +G + AR LF M +RNV +
Sbjct: 182 VLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVIT 241
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
WT++I G K G E+ +F M ++G K N T+ + AC G +H
Sbjct: 242 WTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLV 301
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
++++ N+L+ MY K G + E VF M+ + VSW+S+I G
Sbjct: 302 SRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAY 361
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M M V++ ++ S G + K L +M I + ++
Sbjct: 362 ELFEKMPGKDM----VSWTDMIKGFSGKGEISKCVELFGMMPEKDNIT-----WTAMISA 412
Query: 240 LSRAGRLEEAREVIANM---SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLND 296
G EEA M V PN + ++L +++ + + K++++ND
Sbjct: 413 FVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVND 472
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 138/301 (45%), Gaps = 20/301 (6%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLI-NVGYVGAARDLFSSMPQRNVRS 60
++ YA G+ A +FD+MP R ++N MI +I N +G A +LF +P++N S
Sbjct: 87 MISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVS 146
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGK--SVHRF 118
+ ++I G + G +EA +++E K + VL++ G L GK R
Sbjct: 147 YATMITGFVRAGRFDEAEFLYAETP---VKFRDSVASNVLLS----GYLRAGKWNEAVRV 199
Query: 119 AKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXX 178
+G ++ V C++++ Y K G + + +F+ M ER V++W++MI G+
Sbjct: 200 FQGMA-VKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDG 258
Query: 179 XXXXXXMIRVG-MKPNYVTFIGVLHACSHVGLVDKG---RALLTIMRRDYGIVPGVEHYG 234
M + G +K N T + AC +G L++ M ++ + G
Sbjct: 259 FGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLG----N 314
Query: 235 CLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLL 294
L+ + S+ G + EA+ V M + V W +L+ G K I A E + D++
Sbjct: 315 SLMSMYSKLGYMGEAKAVFGVMK-NKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMV 373
Query: 295 N 295
+
Sbjct: 374 S 374
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 231 bits (590), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 131/335 (39%), Positives = 189/335 (56%), Gaps = 2/335 (0%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N +I G V +A +F+ + R+V +W S++ G ++ G EA+ +F M +
Sbjct: 443 NSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLE 502
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
NEVT +AV+ AC+ +G LE GK VH +G L++++ ALIDMY KCG L V
Sbjct: 503 MNEVTFLAVIQACSSIGSLEKGKWVHHKLIISG-LKDLFTDTALIDMYAKCGDLNAAETV 561
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
F M R++VSWSSMI + MH M+ G KPN V F+ VL AC H G V
Sbjct: 562 FRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSV 621
Query: 211 DKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
++G+ +M+ +G+ P EH+ C +DLLSR+G L+EA I M + VWG+L+
Sbjct: 622 EEGKYYFNLMK-SFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVN 680
Query: 271 GCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKT 330
GCR+H+ + + + LS + + GYY ++SN+YAE G+WEE R+R MKS +KK
Sbjct: 681 GCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKV 740
Query: 331 PGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKL 365
PG S+I ID V F AG+E Q I+ L
Sbjct: 741 PGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL 775
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 125/233 (53%), Gaps = 5/233 (2%)
Query: 39 NVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVA 98
G + A +F MP R++ +W++++ + G +AL++F M DG +P+ VT+++
Sbjct: 148 QTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMIS 207
Query: 99 VLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERT 158
V+ CA+LG L +SVH F + +CN+L+ MY KCG L R+FE + ++
Sbjct: 208 VVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKN 267
Query: 159 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT 218
VSW++MI + MI+ G++PN VT VL +C +GL+ +G+++
Sbjct: 268 AVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHG 327
Query: 219 I-MRRDYGIVPGVEHYG-CLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALL 269
+RR+ + P E LV+L + G+L + V+ +S N V W +L+
Sbjct: 328 FAVRRE--LDPNYESLSLALVELYAECGKLSDCETVLRVVS-DRNIVAWNSLI 377
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 142/300 (47%), Gaps = 12/300 (4%)
Query: 21 KMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKV 80
KM D N ++ G + ++ +F + ++N SWT++I + E+AL+
Sbjct: 231 KMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRS 290
Query: 81 FSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCN-ALIDMYV 139
FSEM K G +PN VT+ +VL +C +G + GKSVH FA N + AL+++Y
Sbjct: 291 FSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYA 350
Query: 140 KCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIG 199
+CG L + V + +R +V+W+S+I +A M+ +KP+ T
Sbjct: 351 ECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLAS 410
Query: 200 VLHACSHVGLVDKGRALLT-IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSV 258
+ AC + GLV G+ + ++R D V L+D+ S++G ++ A V N
Sbjct: 411 SISACENAGLVPLGKQIHGHVIRTD---VSDEFVQNSLIDMYSKSGSVDSASTVF-NQIK 466
Query: 259 PPNRVVWGALLGGCRLHKNIVLAEEAMRHL--SKLDLLNDGYYVVMSNVYA----EAGKW 312
+ V W ++L G + N V A ++ S L++ + V+ + E GKW
Sbjct: 467 HRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKW 526
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 9/207 (4%)
Query: 53 MPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG 112
+ RN+ +W S+I A GM +AL +F +M KP+ T+ + + AC G + G
Sbjct: 365 VSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLG 424
Query: 113 KSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMH 172
K +H + + +V N+LIDMY K G ++ VF ++ R+VV+W+SM+ GF+ +
Sbjct: 425 KQIHGHVIRTD-VSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQN 483
Query: 173 XXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEH 232
M ++ N VTF+ V+ ACS +G ++KG+ + + I+ G++
Sbjct: 484 GNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKL-----IISGLKD 538
Query: 233 Y---GCLVDLLSRAGRLEEAREVIANM 256
L+D+ ++ G L A V M
Sbjct: 539 LFTDTALIDMYAKCGDLNAAETVFRAM 565
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 136/297 (45%), Gaps = 15/297 (5%)
Query: 3 LHLYASCGETR-----HARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRN 57
+ L+ SC R HA L+ +RD +I +G ++R +F + P +
Sbjct: 5 MPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPD 64
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGD-LEFGKSVH 116
+ +I C + + A+ ++ + + ++ ++ +VL ACA + L G VH
Sbjct: 65 SFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVH 124
Query: 117 -RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXX 175
R KG G + + +L+ MY + G L + +VF+GM R +V+WS+++ +
Sbjct: 125 GRIIKG-GVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEV 183
Query: 176 XXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL-TIMRRDYGIVPGVEHYG 234
M+ G++P+ VT I V+ C+ +G + R++ I R+ + + +
Sbjct: 184 VKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETL--CN 241
Query: 235 CLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL 291
L+ + S+ G L + + ++ N V W A++ + +E+A+R S++
Sbjct: 242 SLLTMYSKCGDLLSSERIFEKIA-KKNAVSWTAMISS---YNRGEFSEKALRSFSEM 294
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 3/164 (1%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G+ H +L+ + +D+ T +I G + AA +F +M R++ SW+S+I
Sbjct: 524 GKWVHHKLIISGL--KDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYG 581
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
G A+ F++M + G+KPNEV + VL AC G +E GK K G N
Sbjct: 582 MHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSE 641
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVS-WSSMIVGFAMH 172
ID+ + G L+E YR + M S W S++ G +H
Sbjct: 642 HFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIH 685
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 231 bits (589), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 119/342 (34%), Positives = 195/342 (57%), Gaps = 5/342 (1%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS 60
++L +Y + + AR F+ +P+++ W++M++ +G V AR +F + R++
Sbjct: 182 VMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVI 241
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
W ++I G A+ G ++A+ F M+ +G +P+ VTV ++L ACAQ G L+ G+ VH
Sbjct: 242 WNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLIN 301
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
G N +V NALIDMY KCG LE VFE + R+V +SMI A+H
Sbjct: 302 HRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALE 361
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M + +KP+ +TFI VL AC H G + +G + + M+ + P V+H+GCL+ LL
Sbjct: 362 MFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLIHLL 420
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY-- 298
R+G+L+EA ++ M V PN V GALLG C++H + +AE+ M+ + + + Y
Sbjct: 421 GRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSE 480
Query: 299 --YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITI 338
+SN+YA +W+ +R M+ RG++K+PG SS+ +
Sbjct: 481 NHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSLVL 522
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 153/339 (45%), Gaps = 17/339 (5%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQ-RNVRS 60
L+ +Y CG AR +FD+MP+R++ATWN MI ++ G A LF + RN +
Sbjct: 87 LISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVT 146
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTV-VAVLVACAQLGDL-EFGKSVHRF 118
W +I G K E+A ++F M + +V + V V ++ D +F + +
Sbjct: 147 WIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPE- 205
Query: 119 AKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXX 178
+N +V + ++ Y + G + E +F + R +V W+++I G+A +
Sbjct: 206 -------KNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDA 258
Query: 179 XXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVD 238
M G +P+ VT +L AC+ G +D GR + +++ GI L+D
Sbjct: 259 IDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHR-GIELNQFVSNALID 317
Query: 239 LLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY 298
+ ++ G LE A V ++SV + +++ +H A E + LDL D
Sbjct: 318 MYAKCGDLENATSVFESISV-RSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEI 376
Query: 299 -YVVMSNVYAEAGKWEEVSRIRRLMKSRGVK---KTPGC 333
++ + G E +I MK++ VK K GC
Sbjct: 377 TFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGC 415
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 8/177 (4%)
Query: 96 VVAVLVACA-QLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM 154
V +L ACA + + GK +H + G +V V ++LI MY KCGC+ +VF+ M
Sbjct: 48 VPLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEM 107
Query: 155 RERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGR 214
ER V +W++MI G+ + + + N VT+I ++ ++K R
Sbjct: 108 PERNVATWNAMIGGYMSNGDAVLASGLFE---EISVCRNTVTWIEMIKGYGKRIEIEKAR 164
Query: 215 ALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
L M + + V+ + ++ + ++E+AR+ ++ N VW ++ G
Sbjct: 165 ELFERMPFE---LKNVKAWSVMLGVYVNNRKMEDARKFFEDIP-EKNAFVWSLMMSG 217
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 231 bits (589), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 120/330 (36%), Positives = 189/330 (57%), Gaps = 2/330 (0%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
Y A +F +MP RD +WN+M++ +VG V AR F P+++ SW S+I
Sbjct: 322 YVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSII 381
Query: 66 YGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL 125
K +EA+ +F M +G KP+ T+ ++L A L +L G +H+ +
Sbjct: 382 AAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT-VI 440
Query: 126 RNVYVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMHXXXXXXXXXXXX 184
+V V NALI MY +CG + E R+F+ M+ +R V++W++MI G+A H
Sbjct: 441 PDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGS 500
Query: 185 MIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAG 244
M G+ P+++TF+ VL+AC+H GLVD+ +A M Y I P +EHY LV++ S G
Sbjct: 501 MKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQG 560
Query: 245 RLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSN 304
+ EEA +I +M P++ VWGALL CR++ N+ LA A +S+L+ + YV++ N
Sbjct: 561 QFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYN 620
Query: 305 VYAEAGKWEEVSRIRRLMKSRGVKKTPGCS 334
+YA+ G W+E S++R M+S+ +KK G S
Sbjct: 621 MYADMGLWDEASQVRMNMESKRIKKERGSS 650
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 118/295 (40%), Gaps = 59/295 (20%)
Query: 6 YASCGETRHARLMFDKMPQ---------------RDIATWNIMIAHLINVGYVGAARDLF 50
Y G+ AR +FD++P +++ +WN MI + VG V +AR LF
Sbjct: 245 YGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLF 304
Query: 51 SSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLE 110
M R+ SW ++I G E+A +FSEM PN
Sbjct: 305 DQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM------PN------------------ 340
Query: 111 FGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFA 170
R+ + N ++ Y G +E FE E+ VSW+S+I +
Sbjct: 341 ---------------RDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYE 385
Query: 171 MHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGV 230
+ M G KP+ T +L A + + + G + I+ + ++P V
Sbjct: 386 KNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT--VIPDV 443
Query: 231 EHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
+ L+ + SR G + E+R + M + + W A++GG H N A EA+
Sbjct: 444 PVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGN---ASEAL 495
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 49/212 (23%)
Query: 6 YASCGETR---HARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWT 62
Y SCG R AR +FD+MP RD +WN MI+ +G A LF MP+RN SW+
Sbjct: 112 YVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWS 171
Query: 63 SVIYGLAKCGMCEEALKVFSEMEKDGSKP----------NEVTVVAVLVACAQLGDLEFG 112
++I G + G + A+ +F +M S P NE A V Q G L G
Sbjct: 172 AMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWV-LGQYGSLVSG 230
Query: 113 KSVHRFAK-----GNG------------------------------FLRNVYVCNALIDM 137
+ +A G G F +NV N++I
Sbjct: 231 REDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKA 290
Query: 138 YVKCGCLEEGYRVFEGMRERTVVSWSSMIVGF 169
Y+K G + +F+ M++R +SW++MI G+
Sbjct: 291 YLKVGDVVSARLLFDQMKDRDTISWNTMIDGY 322
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 69/163 (42%), Gaps = 42/163 (25%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G AR +F+K+ R+ TWN MI+ + + AR LF MP+R+V +W ++I G
Sbjct: 54 GYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYV 113
Query: 70 KCG---MCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLR 126
CG EEA K+F EM R
Sbjct: 114 SCGGIRFLEEARKLFDEMPS---------------------------------------R 134
Query: 127 NVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGF 169
+ + N +I Y K + E +FE M ER VSWS+MI GF
Sbjct: 135 DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGF 177
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 124/298 (41%), Gaps = 38/298 (12%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVG---YVGAARDLFSSMPQRNVRSWT 62
Y E AR +FD MP+RD+ TWN MI+ ++ G ++ AR LF MP R+ SW
Sbjct: 81 YVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWN 140
Query: 63 SVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGN 122
++I G AK EAL +F +M + N V+ A++ Q G+++ + R
Sbjct: 141 TMISGYAKNRRIGEALLLFEKMPER----NAVSWSAMITGFCQNGEVDSAVVLFRKMP-- 194
Query: 123 GFLRNVYVCNALIDMYVKCGCLEEG------YRVFEGMRERTVVSWSSMIVGFAMHXXXX 176
+++ AL+ +K L E Y RE V +++++IVG+
Sbjct: 195 --VKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVE 252
Query: 177 XXXXXXXXM-----------IRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
+ R N V++ ++ A VG V R L M+
Sbjct: 253 AARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDT 312
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV--WGALLGGCRLHKNIVLA 281
I + ++D R+E+A + + M PNR W ++ G N+ LA
Sbjct: 313 I-----SWNTMIDGYVHVSRMEDAFALFSEM---PNRDAHSWNMMVSGYASVGNVELA 362
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 32/114 (28%)
Query: 2 LLHLYASCGETRHARLMFDKMP-QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS 60
L+ +Y+ CGE +R +FD+M +R++ TWN MI
Sbjct: 449 LITMYSRCGEIMESRRIFDEMKLKREVITWNAMIG------------------------- 483
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKS 114
G A G EAL +F M+ +G P+ +T V+VL ACA G ++ K+
Sbjct: 484 ------GYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKA 531
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 133/388 (34%), Positives = 203/388 (52%), Gaps = 18/388 (4%)
Query: 1 MLLHLYASCGETRHARLMF-DKMPQRDIA-------------TWNIMIAHLINVGYVGAA 46
ML + ++S E +++ L F K+ RD A +WN +I + +G A
Sbjct: 231 MLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKA 290
Query: 47 RDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQL 106
++F P++N+ +WT++I G + G E+AL+ F EM K G + AVL AC+ L
Sbjct: 291 LEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGL 350
Query: 107 GDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMI 166
L GK +H GF YV NAL+++Y KCG ++E R F + + +VSW++M+
Sbjct: 351 ALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTML 410
Query: 167 VGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGI 226
F +H MI G+KP+ VTFIG+L CSH GLV++G + M +DY I
Sbjct: 411 FAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRI 470
Query: 227 VPGVEHYGCLVDLLSRAGRLEEAREVIANMSV----PPNRVVWGALLGGCRLHKNIVLAE 282
V+H C++D+ R G L EA+++ S N W LLG C H + L
Sbjct: 471 PLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGR 530
Query: 283 EAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVV 342
E + L + + +V++SN+Y G+W+E +RR M RG+KKTPGCS I + V
Sbjct: 531 EVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQV 590
Query: 343 HEFVAGDETHPQAKGIFEMWEKLLVKMK 370
FV GD +HP+ + + E L +M+
Sbjct: 591 STFVVGDSSHPRLEELSETLNCLQHEMR 618
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 142/323 (43%), Gaps = 47/323 (14%)
Query: 2 LLHLYASCGETRHARLMFDKM--PQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVR 59
L+ +Y C +T A +F M R+ TW ++ +N AA D+F MP+R
Sbjct: 111 LIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAF 170
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVAC-AQLGDLEFGKSVHRF 118
+W +I G A CG E L +F EM + KP+ T +++ AC A ++ +G+ VH
Sbjct: 171 AWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAV 230
Query: 119 AKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR----------------------- 155
NG+ V N+++ Y K G ++ R E +
Sbjct: 231 MLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKA 290
Query: 156 --------ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHV 207
E+ +V+W++MI G+ + M++ G+ ++ + VLHACS +
Sbjct: 291 LEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGL 350
Query: 208 GLVDKGRALLTIMRRDYGIVPGVEHYG----CLVDLLSRAGRLEEAREVIANMSVPPNRV 263
L+ G+ + + I G + Y LV+L ++ G ++EA +++ + V
Sbjct: 351 ALLGHGKMIHGCL-----IHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIA-NKDLV 404
Query: 264 VWGALLGGCRLHKNIVLAEEAMR 286
W +L +H LA++A++
Sbjct: 405 SWNTMLFAFGVHG---LADQALK 424
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 140/328 (42%), Gaps = 39/328 (11%)
Query: 34 IAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNE 93
IA L G + +AR +F MP+ + +W +++ ++ G+ +EA+ +F+++ +KP++
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 94 VTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG----------- 142
+ A+L CA LG+++FG+ + +GF ++ V N+LIDMY KC
Sbjct: 71 YSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRD 130
Query: 143 -C---------------------LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
C E VF M +R +W+ MI G A
Sbjct: 131 MCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLS 190
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACS-HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M+ KP+ TF +++ACS V GR + +M ++ G VE ++
Sbjct: 191 LFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKN-GWSSAVEAKNSVLSF 249
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY 299
++ G ++A + ++ V +V W +++ C I E+A+ N +
Sbjct: 250 YTKLGSRDDAMRELESIEV-LTQVSWNSIIDACM---KIGETEKALEVFHLAPEKNIVTW 305
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGV 327
M Y G E+ R M GV
Sbjct: 306 TTMITGYGRNGDGEQALRFFVEMMKSGV 333
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/332 (35%), Positives = 193/332 (58%), Gaps = 4/332 (1%)
Query: 8 SCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYG 67
S G+ H L+ + + T N +I + + A +F + +++ SW S+I G
Sbjct: 221 SLGKGIHG-LILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISG 279
Query: 68 LAKCGMCEEALKVFSEME-KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLR 126
L C +EA+ +FS M+ G KP+ + +VL ACA LG ++ G+ VH + G
Sbjct: 280 LVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKW 339
Query: 127 NVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI 186
+ ++ A++DMY KCG +E +F G+R + V +W++++ G A+H M+
Sbjct: 340 DTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMV 399
Query: 187 RVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMR-RDYGIVPGVEHYGCLVDLLSRAGR 245
++G KPN VTF+ L+AC H GLVD+GR M+ R+Y + P +EHYGC++DLL RAG
Sbjct: 400 KLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGL 459
Query: 246 LEEAREVIANMSVPPNRVVWGALLGGCRLHKNIV-LAEEAMRHLSKLDLLNDGYYVVMSN 304
L+EA E++ M V P+ + GA+L C+ ++ L +E + ++ + G YV++SN
Sbjct: 460 LDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSN 519
Query: 305 VYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSI 336
++A +W++V+RIRRLMK +G+ K PG S I
Sbjct: 520 IFAANRRWDDVARIRRLMKVKGISKVPGSSYI 551
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 156/340 (45%), Gaps = 54/340 (15%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+H Y CGE+R+A +F MP R+V SW
Sbjct: 147 LVHFYGVCGESRNAC-------------------------------KVFGEMPVRDVVSW 175
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
T +I G + G+ +EAL FS+M+ + PN T V VLV+ ++G L GK +H
Sbjct: 176 TGIITGFTRTGLYKEALDTFSKMDVE---PNLATYVCVLVSSGRVGCLSLGKGIHGLILK 232
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
L ++ NALIDMYVKC L + RVF + ++ VSW+SMI G +H
Sbjct: 233 RASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGL-VHCERSKEAID 291
Query: 182 XXXMIRV--GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVE---HYG-C 235
+++ G+KP+ VL AC+ +G VD GR + +Y + G++ H G
Sbjct: 292 LFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWV-----HEYILTAGIKWDTHIGTA 346
Query: 236 LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLL- 294
+VD+ ++ G +E A E+ + N W ALLGG +H + E++R+ ++ L
Sbjct: 347 IVDMYAKCGYIETALEIFNGIR-SKNVFTWNALLGGLAIHGH---GLESLRYFEEMVKLG 402
Query: 295 ---NDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTP 331
N ++ N G +E R MKSR P
Sbjct: 403 FKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFP 442
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 125/279 (44%), Gaps = 15/279 (5%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDL--FSSMPQRNV 58
+LL L + C R + + ++ RD+ +++I ++ ++G + D +SS+ ++
Sbjct: 8 VLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVT--FLGKSADFASYSSVILHSI 65
Query: 59 RS------WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG 112
RS + +++ A C + + +G P+ T V AC + + G
Sbjct: 66 RSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREG 125
Query: 113 KSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMH 172
K +H GF ++YV N+L+ Y CG +VF M R VVSW+ +I GF
Sbjct: 126 KQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRT 185
Query: 173 XXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEH 232
M ++PN T++ VL + VG + G+ + ++ + ++ +E
Sbjct: 186 GLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLI-SLET 241
Query: 233 YGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
L+D+ + +L +A V + ++V W +++ G
Sbjct: 242 GNALIDMYVKCEQLSDAMRVFGELE-KKDKVSWNSMISG 279
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 194/339 (57%), Gaps = 4/339 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++H YA + + A F+ + IA+ N +IA + G V AR++F +++ SW
Sbjct: 346 IIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSW 405
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
++I G A+ + AL +F EM KP+ +T+V+V A + LG LE GK H +
Sbjct: 406 NAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLN 465
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVF---EGMRERTVVSWSSMIVGFAMHXXXXX 177
+ N + A+IDMY KCG +E +F + + T+ W+++I G A H
Sbjct: 466 FSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKL 525
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
+ + +KPN +TF+GVL AC H GLV+ G+ M+ D+GI P ++HYGC+V
Sbjct: 526 ALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMV 585
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG 297
DLL +AGRLEEA+E+I M V + ++WG LL R H N+ +AE A L+ +D + G
Sbjct: 586 DLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGG 645
Query: 298 YYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSI 336
V++SNVYA+AG+WE+V+ +R M++R V+ + S +
Sbjct: 646 CKVMLSNVYADAGRWEDVALVREEMRTRDVEWSRAFSGV 684
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 155/331 (46%), Gaps = 45/331 (13%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LLH+Y C + AR +FD+MP+R++ TWN+M+ G + A +LF + ++++ SW
Sbjct: 214 LLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSW 273
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I G + +EAL ++EM + G KP+EV +V +L A A+ G +H
Sbjct: 274 GTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVK 333
Query: 122 NGF---------LRNVYVC----------------------NALIDMYVKCGCLEEGYRV 150
GF + + Y NALI +VK G +E+ V
Sbjct: 334 RGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREV 393
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG-MKPNYVTFIGVLHACSHVGL 209
F+ ++ + SW++MI G+A MI +KP+ +T + V A S +G
Sbjct: 394 FDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGS 453
Query: 210 VDKGRALLTIMRRDYGIVPGVEHY-GCLVDLLSRAGRLEEAREV------IANMSVPPNR 262
+++G+ + ++ +P ++ ++D+ ++ G +E A + I++ ++ P
Sbjct: 454 LEEGKRAHDYL--NFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISP-- 509
Query: 263 VVWGALLGGCRLHKNIVLAEEAMRHLSKLDL 293
W A++ G H + LA + L L +
Sbjct: 510 --WNAIICGSATHGHAKLALDLYSDLQSLPI 538
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 117/255 (45%), Gaps = 32/255 (12%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
+L++YA C A +F + D A++NIM+ + + A LF MP+R+ S+
Sbjct: 82 VLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSY 141
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA-- 119
T++I G A+ EA+++F EM G NEVT+ V+ AC+ LG + + + A
Sbjct: 142 TTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIK 201
Query: 120 ---KGNGFL--------------------------RNVYVCNALIDMYVKCGCLEEGYRV 150
+G F+ RN+ N +++ Y K G +E+ +
Sbjct: 202 LKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEEL 261
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
F+ + E+ +VSW +MI G M+R GMKP+ V + +L A +
Sbjct: 262 FDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGS 321
Query: 211 DKGRALL-TIMRRDY 224
KG L TI++R +
Sbjct: 322 SKGLQLHGTIVKRGF 336
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 107/248 (43%), Gaps = 43/248 (17%)
Query: 89 SKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEE-- 146
S E +V+ L +CA D+ G+ +H +G N Y+CN++++MY KC L +
Sbjct: 37 SSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAE 96
Query: 147 -------------------GY----------RVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
GY ++F+ M ER+ VS++++I G+A +
Sbjct: 97 SVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSE 156
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL--LTIMRRDYG---IVPGVEH 232
M +G+ N VT V+ ACSH+G + R L L I + G + + H
Sbjct: 157 AMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLH 216
Query: 233 YGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLD 292
CL L++AR++ M N V W +L G I AEE +++ D
Sbjct: 217 MYCLCLC------LKDARKLFDEMP-ERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKD 269
Query: 293 LLNDGYYV 300
+++ G +
Sbjct: 270 IVSWGTMI 277
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 228 bits (582), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 125/332 (37%), Positives = 187/332 (56%), Gaps = 3/332 (0%)
Query: 49 LFSSMPQ-RNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLG 107
LFS + +++ WT ++ G ++ G EEALK + EM DG P++ T V VL C+ L
Sbjct: 687 LFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLS 746
Query: 108 DLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERT-VVSWSSMI 166
L G+++H + N LIDMY KCG ++ +VF+ MR R+ VVSW+S+I
Sbjct: 747 SLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLI 806
Query: 167 VGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGI 226
G+A + M + + P+ +TF+GVL ACSH G V GR + +M YGI
Sbjct: 807 NGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGI 866
Query: 227 VPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMR 286
V+H C+VDLL R G L+EA + I ++ P+ +W +LLG CR+H + + E +
Sbjct: 867 EARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAE 926
Query: 287 HLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFV 346
L +L+ N YV++SN+YA G WE+ + +R++M+ RGVKK PG S I ++ H F
Sbjct: 927 KLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFA 986
Query: 347 AGDETHPQAKGIFEMWEKLLVKMKMKGYI-PD 377
AGD++H + I E L MK + PD
Sbjct: 987 AGDKSHSEIGKIEMFLEDLYDLMKDDAVVNPD 1018
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 162/363 (44%), Gaps = 31/363 (8%)
Query: 45 AARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACA 104
AA +F ++ ++N W ++I G A G + +++F +M+ G ++ T ++L CA
Sbjct: 380 AAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCA 439
Query: 105 QLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSS 164
DLE G H +N++V NAL+DMY KCG LE+ ++FE M +R V+W++
Sbjct: 440 ASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNT 499
Query: 165 MIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDY 224
+I + M G+ + L AC+HV + +G+ + + +
Sbjct: 500 IIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVK-C 558
Query: 225 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV-WGALLGG---CRLHKNIVL 280
G+ + L+D+ S+ G +++AR+V + S+P VV AL+ G L + +VL
Sbjct: 559 GLDRDLHTGSSLIDMYSKCGIIKDARKVFS--SLPEWSVVSMNALIAGYSQNNLEEAVVL 616
Query: 281 AE------------------EAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLM 322
+ EA L L + + ++ G++ +S + M
Sbjct: 617 FQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYM 676
Query: 323 KSRGVKKTPGC---SSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTS 379
SRG+ T C S ++ + + H Q G +E K +M+ G +PD +
Sbjct: 677 NSRGM--TEACALFSELSSPKSIVLWTGMMSGHSQ-NGFYEEALKFYKEMRHDGVLPDQA 733
Query: 380 VVL 382
+
Sbjct: 734 TFV 736
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 136/300 (45%), Gaps = 6/300 (2%)
Query: 2 LLHLYASCGETRHARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMPQRN 57
L Y G A L+F++M D + +I I +G + AR LF M +
Sbjct: 232 LFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPD 291
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
V +W +I G K G A++ F M K K T+ +VL A + +L+ G VH
Sbjct: 292 VVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHA 351
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
A G N+YV ++L+ MY KC +E +VFE + E+ V W++MI G+A +
Sbjct: 352 EAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHK 411
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
M G + TF +L C+ ++ G +I+ + + + LV
Sbjct: 412 VMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK-KLAKNLFVGNALV 470
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG 297
D+ ++ G LE+AR++ M N V W ++G +N A + + ++ +++DG
Sbjct: 471 DMYAKCGALEDARQIFERMCDRDN-VTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDG 529
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 126/287 (43%), Gaps = 39/287 (13%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +YA CG AR +F++M RD TWN +I + A DLF M
Sbjct: 469 LVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMN------- 521
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+ G+ G C + + L AC + L GK VH +
Sbjct: 522 ---LCGIVSDGAC---------------------LASTLKACTHVHGLYQGKQVHCLSVK 557
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
G R+++ ++LIDMY KCG +++ +VF + E +VVS +++I G++ +
Sbjct: 558 CGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLF 617
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL-TIMRRDYGIVPGVEHYG-CLVDL 239
+ R G+ P+ +TF ++ AC + G I +R G E+ G L+ +
Sbjct: 618 QEMLTR-GVNPSEITFATIVEACHKPESLTLGTQFHGQITKR--GFSSEGEYLGISLLGM 674
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMR 286
+ + EA + + +S P + V+W ++ G H EEA++
Sbjct: 675 YMNSRGMTEACALFSELSSPKSIVLWTGMMSG---HSQNGFYEEALK 718
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 155/380 (40%), Gaps = 57/380 (15%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++ LYA C + +A FD + ++D+ WN M++ ++G P + +RS+
Sbjct: 101 IVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIG-----------KPGKVLRSF 148
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
S+ ++F PN+ T VL CA+ ++EFG+ +H
Sbjct: 149 VSLFEN-----------QIF---------PNKFTFSIVLSTCARETNVEFGRQIHCSMIK 188
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
G RN Y AL+DMY KC + + RVFE + + V W+ + G+
Sbjct: 189 MGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLV 248
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M G +P+++ F+ V++ +G + R L M P V + ++
Sbjct: 249 FERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHG 303
Query: 242 RAGRLEEAREVIANM---SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY 298
+ G A E NM SV R G++L + N+ L KL L ++ Y
Sbjct: 304 KRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIY 363
Query: 299 Y-VVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKG 357
+ ++Y++ K E +++ ++ + + + + ++ + E+H
Sbjct: 364 VGSSLVSMYSKCEKMEAAAKVFEALEEK--------NDVFWNAMIRGYAHNGESHKVM-- 413
Query: 358 IFEMWEKLLVKMKMKGYIPD 377
+L + MK GY D
Sbjct: 414 ------ELFMDMKSSGYNID 427
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 228 bits (582), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 121/333 (36%), Positives = 182/333 (54%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N M+ G + +A LF M R++ SW+++I G + G EE K FS M + G+K
Sbjct: 349 NSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTK 408
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
P + + ++L + +E G+ VH A G +N V ++LI+MY KCG ++E +
Sbjct: 409 PTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMI 468
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
F +VS ++MI G+A H ++VG +P+ VTFI VL AC+H G +
Sbjct: 469 FGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQL 528
Query: 211 DKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
D G +M+ Y + P EHYGC+VDLL RAGRL +A ++I MS + VVW LL
Sbjct: 529 DLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLI 588
Query: 271 GCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKT 330
C+ +I A + +LD V ++N+Y+ G EE + +R+ MK++GV K
Sbjct: 589 ACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKE 648
Query: 331 PGCSSITIDGVVHEFVAGDETHPQAKGIFEMWE 363
PG SSI I V FV+GD HPQ++ I+ + E
Sbjct: 649 PGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 116/250 (46%), Gaps = 5/250 (2%)
Query: 40 VGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAV 99
VG + + +FS MP RN +WT++I GL G +E L FSEM + + T
Sbjct: 156 VGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIA 215
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
L ACA L +++GK++H GF+ + V N+L MY +CG +++G +FE M ER V
Sbjct: 216 LKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDV 275
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
VSW+S+IV + M + PN TF + AC+ + + G L
Sbjct: 276 VSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCN 335
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIV 279
+ G+ + ++ + S G L A + M + + W ++GG +
Sbjct: 336 V-LSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRC-RDIISWSTIIGG---YCQAG 390
Query: 280 LAEEAMRHLS 289
EE ++ S
Sbjct: 391 FGEEGFKYFS 400
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 145/338 (42%), Gaps = 46/338 (13%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME--KDG 88
N + LIN G + AAR +F MP ++ SWTS+I +EAL +FS M
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 89 SKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGY 148
P+ + VL AC Q ++ +G+S+H +A L +VYV ++L+DMY + G +++
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 149 RVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVG 208
RVF M R V+W+++I G M R + TF L AC+ +
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223
Query: 209 LVDKGRALLT--IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA---------REVIA--- 254
V G+A+ T I+R G V + L + + G +++ R+V++
Sbjct: 224 QVKYGKAIHTHVIVR---GFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTS 280
Query: 255 ----------------------NMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLD 292
N VPPN + ++ C +V E+ H + L
Sbjct: 281 LIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQL--HCNVLS 338
Query: 293 L-LNDGYYV--VMSNVYAEAGKWEEVSRIRRLMKSRGV 327
L LND V M +Y+ G S + + M+ R +
Sbjct: 339 LGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDI 376
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 99/201 (49%), Gaps = 1/201 (0%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGD 108
LF +M +R+V SWTS+I + G +A++ F +M PNE T ++ ACA L
Sbjct: 266 LFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSR 325
Query: 109 LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVG 168
L +G+ +H G ++ V N+++ MY CG L +F+GMR R ++SWS++I G
Sbjct: 326 LVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGG 385
Query: 169 FAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVP 228
+ M + G KP +L ++ +++ GR + + +G+
Sbjct: 386 YCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALC-FGLEQ 444
Query: 229 GVEHYGCLVDLLSRAGRLEEA 249
L+++ S+ G ++EA
Sbjct: 445 NSTVRSSLINMYSKCGSIKEA 465
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 228 bits (581), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 127/362 (35%), Positives = 202/362 (55%), Gaps = 7/362 (1%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQ-RDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVR 59
++++ Y G+ A +F+++ D +W MI + G V A LF + ++
Sbjct: 373 IIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGV 432
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH-RF 118
+WT +I GL + + EA + S+M + G KP T +L + +L+ GK +H
Sbjct: 433 TWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVI 492
Query: 119 AKGNG-FLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
AK + ++ + N+L+ MY KCG +E+ Y +F M ++ VSW+SMI+G + H
Sbjct: 493 AKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADK 552
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
M+ G KPN VTF+GVL ACSH GL+ +G L M+ Y I PG++HY ++
Sbjct: 553 ALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMI 612
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH----KNIVLAEEAMRHLSKLDL 293
DLL RAG+L+EA E I+ + P+ V+GALLG C L+ +AE A L +LD
Sbjct: 613 DLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDP 672
Query: 294 LNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHP 353
+N +V + NVYA G+ + +R+ M +GVKKTPGCS + ++G + F++GD++
Sbjct: 673 VNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSAS 732
Query: 354 QA 355
+A
Sbjct: 733 EA 734
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 149/342 (43%), Gaps = 75/342 (21%)
Query: 14 HARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGM 73
A+L+F M ++++ TW M+ G V A LF MP+RN+ SWT++I G A +
Sbjct: 218 EAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNEL 277
Query: 74 CEEALKVFSEMEK--DGSKPNEVTVVAVLVACAQLGDLEF---GKSVHRFAKGNGF---- 124
EAL +F EM+K D PN T++++ AC LG +EF G+ +H NG+
Sbjct: 278 YREALMLFLEMKKDVDAVSPNGETLISLAYACGGLG-VEFRRLGEQLHAQVISNGWETVD 336
Query: 125 --------LRNVYV--------------------CNALIDMYVKCGCLE----------- 145
L ++Y CN +I+ Y+K G LE
Sbjct: 337 HDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKS 396
Query: 146 -----------EGYR----------VFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXX 184
+GY +F+ + ++ V+W+ MI G +
Sbjct: 397 LHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSD 456
Query: 185 MIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIV-PGVEHYGCLVDLLSRA 243
M+R G+KP T+ +L + +D+G+ + ++ + P + LV + ++
Sbjct: 457 MVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKC 516
Query: 244 GRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
G +E+A E+ A M V + V W +++ G H LA++A+
Sbjct: 517 GAIEDAYEIFAKM-VQKDTVSWNSMIMGLSHHG---LADKAL 554
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 11/210 (5%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
+L Y C A +F +MP +++ +W +M+ L + G A +LF MP+RNV SW
Sbjct: 114 MLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSW 172
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+++ GL + G E+A +VF M + V+ A++ + +E K + G
Sbjct: 173 NTLVTGLIRNGDMEKAKQVFDAM----PSRDVVSWNAMIKGYIENDGMEEAKLLF----G 224
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+ +NV +++ Y + G + E YR+F M ER +VSW++MI GFA +
Sbjct: 225 DMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALML 284
Query: 182 XXXMIR--VGMKPNYVTFIGVLHACSHVGL 209
M + + PN T I + +AC +G+
Sbjct: 285 FLEMKKDVDAVSPNGETLISLAYACGGLGV 314
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 82/160 (51%), Gaps = 13/160 (8%)
Query: 14 HARLMFDKMPQRD----IATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
HAR + DK+PQR + W +++ GY+ AR LF MP+RN+ + +++ G
Sbjct: 60 HARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYV 119
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
KC EA +F EM K N V+ +L A G E +V F + RNV
Sbjct: 120 KCRRMNEAWTLFREMPK-----NVVSWTVMLTALCDDGRSE--DAVELFDEMPE--RNVV 170
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGF 169
N L+ ++ G +E+ +VF+ M R VVSW++MI G+
Sbjct: 171 SWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGY 210
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/314 (36%), Positives = 177/314 (56%), Gaps = 2/314 (0%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ N +I+ G + A FS + ++V S+ S+I G EE+ ++F EM
Sbjct: 342 DLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMR 401
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
G +P+ T++ VL AC+ L L G S H + +G+ N +CNAL+DMY KCG L+
Sbjct: 402 TSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLD 461
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
RVF+ M +R +VSW++M+ GF +H M G+ P+ VT + +L ACS
Sbjct: 462 VAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACS 521
Query: 206 HVGLVDKGRALLTIMRR-DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV 264
H GLVD+G+ L M R D+ ++P ++HY C+ DLL+RAG L+EA + + M P+ V
Sbjct: 522 HSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRV 581
Query: 265 WGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKS 324
G LL C +KN L E + + L + V++SN Y+ A +WE+ +RIR + K
Sbjct: 582 LGTLLSACWTYKNAELGNEVSKKMQSLGETTES-LVLLSNTYSAAERWEDAARIRMIQKK 640
Query: 325 RGVKKTPGCSSITI 338
RG+ KTPG S + +
Sbjct: 641 RGLLKTPGYSWVDV 654
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 128/271 (47%), Gaps = 32/271 (11%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L LYASC E AR +FD++P P+ N +W
Sbjct: 41 LTRLYASCNEVELARHVFDEIPH-----------------------------PRINPIAW 71
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+I A E+AL ++ +M G +P + T VL ACA L ++ GK +H
Sbjct: 72 DLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNC 131
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+ F ++YVC AL+D Y KCG LE +VF+ M +R +V+W++MI GF++H
Sbjct: 132 SDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGL 191
Query: 182 XXXMIRV-GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M R+ G+ PN T +G+ A G + +G+A+ R G + ++D+
Sbjct: 192 FLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTR-MGFSNDLVVKTGILDVY 250
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+++ + AR V ++ N V W A++GG
Sbjct: 251 AKSKCIIYARRVF-DLDFKKNEVTWSAMIGG 280
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 127/252 (50%), Gaps = 15/252 (5%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM--EKDGSKPNEVTVVAVLVAC 103
AR +F ++N +W+++I G + M +EA +VF +M + + V + +L+ C
Sbjct: 259 ARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGC 318
Query: 104 AQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWS 163
A+ GDL G+ VH +A GF+ ++ V N +I Y K G L + +R F + + V+S++
Sbjct: 319 ARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYN 378
Query: 164 SMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRD 223
S+I G ++ M G++P+ T +GVL ACSH+ + G +
Sbjct: 379 SLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSC-----HG 433
Query: 224 YGIVPG--VEHYGC--LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIV 279
Y +V G V C L+D+ ++ G+L+ A+ V M + V W +L G +H
Sbjct: 434 YCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMH-KRDIVSWNTMLFGFGIHG--- 489
Query: 280 LAEEAMRHLSKL 291
L +EA+ + +
Sbjct: 490 LGKEALSLFNSM 501
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 110/236 (46%), Gaps = 7/236 (2%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEK-DGSKPNEVTVVAV 99
G + A +F MP+R++ +W ++I G + + + +F +M + DG PN T+V +
Sbjct: 152 GELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGM 211
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
A + G L GK+VH + GF ++ V ++D+Y K C+ RVF+ ++
Sbjct: 212 FPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNE 271
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIG---VLHACSHVGLVDKGRAL 216
V+WS+MI G+ + M+ V VT + +L C+ G + GR +
Sbjct: 272 VTWSAMIGGYVENEMIKEAGEVFFQML-VNDNVAMVTPVAIGLILMGCARFGDLSGGRCV 330
Query: 217 LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGC 272
+ G + + ++ ++ G L +A + + + + + + +L+ GC
Sbjct: 331 HCYAVKA-GFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGL-KDVISYNSLITGC 384
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/335 (36%), Positives = 182/335 (54%), Gaps = 2/335 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMP-QRNVRS 60
LL +Y C HAR +FD++PQR+ WN MI+H + G V A +L+ +M N S
Sbjct: 89 LLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESS 148
Query: 61 WTSVIYGLAKC-GMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
+ ++I GL A++ + +M + KPN +T++A++ AC+ +G K +H +A
Sbjct: 149 FNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYA 208
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
N + + + L++ Y +CG + VF+ M +R VV+WSS+I +A+H
Sbjct: 209 FRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESAL 268
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M + P+ + F+ VL ACSH GL D+ M+ DYG+ +HY CLVD+
Sbjct: 269 KTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDV 328
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY 299
LSR GR EEA +VI M P WGALLG CR + I LAE A R L ++ N Y
Sbjct: 329 LSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANY 388
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCS 334
V++ +Y G+ EE R+R MK GVK +PG S
Sbjct: 389 VLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 110/268 (41%), Gaps = 39/268 (14%)
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAV-LVACAQLGDLEFGKSVHRF 118
S T + A G E+AL +F +M + P + V ++ L +CA G SVH
Sbjct: 14 SLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAH 73
Query: 119 AKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGF--------- 169
+ + FL N +V AL+DMY KC + ++F+ + +R V W++MI +
Sbjct: 74 SVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEA 133
Query: 170 -----AMHXXXXXXXXXXX-------------------XMIRVGMKPNYVTFIGVLHACS 205
AM MI KPN +T + ++ ACS
Sbjct: 134 VELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACS 193
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
+G + + + R+ I P + LV+ R G + + V +M + V W
Sbjct: 194 AIGAFRLIKEIHSYAFRNL-IEPHPQLKSGLVEAYGRCGSIVYVQLVFDSME-DRDVVAW 251
Query: 266 GALLGGCRLHKNIVLAEEAMRHLSKLDL 293
+L+ LH + AE A++ +++L
Sbjct: 252 SSLISAYALHGD---AESALKTFQEMEL 276
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 112/337 (33%), Positives = 176/337 (52%), Gaps = 33/337 (9%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+H+YA C + R A+ +F+ ++DI +W
Sbjct: 383 LVHMYAKCYQNRDAKYVFEMESEKDIV-------------------------------AW 411
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
S+I G ++ G EAL +F M + PN VTV ++ ACA LG L G S+H ++
Sbjct: 412 NSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVK 471
Query: 122 NGFL--RNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
GFL +V+V AL+D Y KCG + +F+ + E+ ++WS+MI G+
Sbjct: 472 LGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSL 531
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M++ KPN TF +L AC H G+V++G+ + M +DY P +HY C+VD+
Sbjct: 532 ELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDM 591
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY 299
L+RAG LE+A ++I M + P+ +GA L GC +H L E ++ + L + YY
Sbjct: 592 LARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYY 651
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSI 336
V++SN+YA G+W + +R LMK RG+ K G S++
Sbjct: 652 VLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTM 688
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 114/235 (48%), Gaps = 3/235 (1%)
Query: 38 INVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVV 97
+ G + AR +F+ ++ WT++I G G EAL +F +M+ KPN VT+
Sbjct: 288 VKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIA 347
Query: 98 AVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER 157
+VL C + +LE G+SVH + G + + V NAL+ MY KC + VFE E+
Sbjct: 348 SVLSGCGLIENLELGRSVHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYVFEMESEK 406
Query: 158 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL 217
+V+W+S+I GF+ + M + PN VT + AC+ +G + G +L
Sbjct: 407 DIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLH 466
Query: 218 TIMRRDYGIVPGVEHYG-CLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ + H G L+D ++ G + AR + + N + W A++GG
Sbjct: 467 AYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIE-EKNTITWSAMIGG 520
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 169/407 (41%), Gaps = 49/407 (12%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G+ H +L+ K+P D ++ G + +A +F+ + RNV WTS+I G
Sbjct: 161 GKKIHCQLV--KVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYV 218
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
K +CEE L +F+ M ++ NE T +++AC +L L GK H +G +
Sbjct: 219 KNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSC 278
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
+ +L+DMYVKCG + RVF +V W++MIVG+ + M V
Sbjct: 279 LVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE 338
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRAL--LTI---------------------MRRDYGI 226
+KPN VT VL C + ++ GR++ L+I RD
Sbjct: 339 IKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKY 398
Query: 227 VPGVEH------YGCLVDLLSRAGRLEEAREVIANM---SVPPNRVVWGALLGGCRLHKN 277
V +E + ++ S+ G + EA + M SV PN V +L C +
Sbjct: 399 VFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGS 458
Query: 278 IVLAEEAMRHLSKLDLLNDGYYVV---MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCS 334
+ + + KL L V + + YA+ G + I ++ + +
Sbjct: 459 LAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEK--------N 510
Query: 335 SITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVV 381
+IT + + G G E++E++L K + TS++
Sbjct: 511 TITWSAM----IGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSIL 553
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 122/275 (44%), Gaps = 44/275 (16%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ LY G T+ ARL+FD++P+ D W +M+
Sbjct: 82 LVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLR-------------------------- 115
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH-RFAK 120
Y L K + E +K++ + K G + +++ L AC +L DL+ GK +H + K
Sbjct: 116 ---CYCLNKESV--EVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVK 170
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
F NV V L+DMY KCG ++ ++VF + R VV W+SMI G+ +
Sbjct: 171 VPSF-DNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLV 228
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV--- 237
M + N T+ ++ AC+ + + +G+ + + G+E CLV
Sbjct: 229 LFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCL-----VKSGIELSSCLVTSL 283
Query: 238 -DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
D+ + G + AR V N + V+W A++ G
Sbjct: 284 LDMYVKCGDISNARRVF-NEHSHVDLVMWTAMIVG 317
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/191 (18%), Positives = 85/191 (44%), Gaps = 11/191 (5%)
Query: 85 EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCL 144
E DGS + + ++ +++ + H GNG + ++ + L+ +Y G
Sbjct: 33 ENDGSSLHYAASSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYT 92
Query: 145 EEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHAC 204
++ VF+ + E W M+ + ++ +++ G + + + F L AC
Sbjct: 93 KDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKAC 152
Query: 205 SHVGLVDKGR----ALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPP 260
+ + +D G+ L+ + D ++ G L+D+ ++ G ++ A +V ++++
Sbjct: 153 TELQDLDNGKKIHCQLVKVPSFDNVVLTG------LLDMYAKCGEIKSAHKVFNDITL-R 205
Query: 261 NRVVWGALLGG 271
N V W +++ G
Sbjct: 206 NVVCWTSMIAG 216
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 221 bits (563), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 122/332 (36%), Positives = 191/332 (57%), Gaps = 3/332 (0%)
Query: 39 NVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVA 98
N+GY A +F S+ ++V SWTS+I A G EA+++F M + G + V ++
Sbjct: 536 NMGY---ATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLC 592
Query: 99 VLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERT 158
+L A A L L G+ +H + GF + A++DMY CG L+ VF+ + +
Sbjct: 593 ILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKG 652
Query: 159 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT 218
++ ++SMI + MH M + P++++F+ +L+ACSH GL+D+GR L
Sbjct: 653 LLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLK 712
Query: 219 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNI 278
IM +Y + P EHY CLVD+L RA + EA E + M P VW ALL CR H
Sbjct: 713 IMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEK 772
Query: 279 VLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITI 338
+ E A + L +L+ N G V++SNV+AE G+W +V ++R MK+ G++K PGCS I +
Sbjct: 773 EIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEM 832
Query: 339 DGVVHEFVAGDETHPQAKGIFEMWEKLLVKMK 370
DG VH+F A D++HP++K I+E ++ K++
Sbjct: 833 DGKVHKFTARDKSHPESKEIYEKLSEVTRKLE 864
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
YA G+ HA ++ ++ N +IA G + A + M +V +W S+I
Sbjct: 299 YAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLI 358
Query: 66 YGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL 125
G + M +EAL+ FS+M G K +EV++ +++ A +L +L G +H + +G+
Sbjct: 359 KGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD 418
Query: 126 RNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMH 172
N+ V N LIDMY KC R F M ++ ++SW+++I G+A +
Sbjct: 419 SNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQN 465
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 137/314 (43%), Gaps = 22/314 (7%)
Query: 8 SCGETRHARLMFDKMPQRDIATWNIMIAHLI----NVGYVGAARDLFSSMPQRNVRSWTS 63
S G H+R+ F P ++ + + L+ G + A +F MP R +W +
Sbjct: 97 SQGRQLHSRI-FKTFPSFEL---DFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNT 152
Query: 64 VIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNG 123
+I G AL ++ M +G + A+L ACA+L D+ G +H G
Sbjct: 153 MIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLG 212
Query: 124 FLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER-TVVSWSSMIVGFAMHXXXXXXXXXX 182
+ ++ NAL+ MY K L R+F+G +E+ V W+S++ ++
Sbjct: 213 YHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELF 272
Query: 183 XXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGC--LVDLL 240
M G PN T + L AC G+ + + + E Y C L+ +
Sbjct: 273 REMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSS--THSSELYVCNALIAMY 330
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY- 299
+R G++ +A ++ M+ + V W +L+ G + ++ +EA+ S D++ G+
Sbjct: 331 TRCGKMPQAERILRQMN-NADVVTWNSLIKG---YVQNLMYKEALEFFS--DMIAAGHKS 384
Query: 300 --VVMSNVYAEAGK 311
V M+++ A +G+
Sbjct: 385 DEVSMTSIIAASGR 398
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 10/206 (4%)
Query: 42 YVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLV 101
Y+G A F M +++ SWT+VI G A+ EAL++F ++ K + +E+ + ++L
Sbjct: 439 YMGRA---FLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILR 495
Query: 102 ACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVS 161
A + L + K +H G L V + N L+D+Y KC + RVFE ++ + VVS
Sbjct: 496 ASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVS 554
Query: 162 WSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL-LTIM 220
W+SMI A++ M+ G+ + V + +L A + + ++KGR + ++
Sbjct: 555 WTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLL 614
Query: 221 RRDYGI-----VPGVEHYGCLVDLLS 241
R+ + + V V+ Y C DL S
Sbjct: 615 RKGFCLEGSIAVAVVDMYACCGDLQS 640
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 10/178 (5%)
Query: 99 VLVACAQLGDLEFGKSVH-RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER 157
VL C + + G+ +H R K ++ L+ MY KCG L++ +VF+ M +R
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDR 145
Query: 158 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL 217
T +W++MI + + M G+ +F +L AC+ + + G L
Sbjct: 146 TAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELH 205
Query: 218 TIMRRDYGIVPGVEHYG----CLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+++ + G G LV + ++ L AR + + V+W ++L
Sbjct: 206 SLL-----VKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSS 258
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 129/367 (35%), Positives = 196/367 (53%), Gaps = 7/367 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
+L+ Y AR FD ++ + +I+ + A LF +MP+R+V +W
Sbjct: 134 VLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTW 193
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSK-PNEVTVVAVLVACAQLGDLEFGKSVHRFA- 119
+VI G ++ G EEA+ F +M ++G PNE T + A + + GKS+H A
Sbjct: 194 NAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAI 253
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRE--RTVVSWSSMIVGFAMHXXXXX 177
K G NV+V N+LI Y KCG +E+ F + E R +VSW+SMI G+A +
Sbjct: 254 KFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEE 313
Query: 178 XXXXXXXMIR-VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGI--VPGVEHYG 234
M++ ++PN VT +GVL AC+H GL+ +G DY + +EHY
Sbjct: 314 AVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYA 373
Query: 235 CLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLL 294
C+VD+LSR+GR +EA E+I +M + P W ALLGGC++H N LA+ A + +LD
Sbjct: 374 CMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPR 433
Query: 295 NDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQ 354
+ YV++SN Y+ W+ VS IRR MK G+K+ GCS I + + FV D+ +
Sbjct: 434 DVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNEL 493
Query: 355 AKGIFEM 361
++ M
Sbjct: 494 KDEVYRM 500
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 112/267 (41%), Gaps = 33/267 (12%)
Query: 38 INVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVV 97
I+ + A +F +P+ +V S T+VI K EA + F + G +PNE T
Sbjct: 38 IDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFG 97
Query: 98 AVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCL------------- 144
V+ + D++ GK +H +A G NV+V +A+++ YVK L
Sbjct: 98 TVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDP 157
Query: 145 ------------------EEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI 186
EE +F M ER+VV+W+++I GF+ M+
Sbjct: 158 NVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDML 217
Query: 187 RVGMK-PNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGR 245
R G+ PN TF + A S++ G+++ + G V + L+ S+ G
Sbjct: 218 REGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGN 277
Query: 246 LEEAREVIANMSVPPNRVV-WGALLGG 271
+E++ + +V W +++ G
Sbjct: 278 MEDSLLAFNKLEEEQRNIVSWNSMIWG 304
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 118/345 (34%), Positives = 185/345 (53%), Gaps = 3/345 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+H+Y CG A+ +F ++P+RDI +WN +IA ++ G V AA LF MP +N+ SW
Sbjct: 159 LMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISW 218
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+I ++ +F EM + G + NE T+V +L AC + L+ G+SVH
Sbjct: 219 NIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIR 278
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+V + ALIDMY KC + R+F+ + R V+W+ MI+ +H
Sbjct: 279 TFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLEL 338
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
MI ++P+ VTF+GVL C+ GLV +G++ ++M ++ I P H C+ +L S
Sbjct: 339 FEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYS 398
Query: 242 RAGRLEEAREVIANM---SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY 298
AG EEA E + N+ V P W LL R N L E + L + D LN Y
Sbjct: 399 SAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKY 458
Query: 299 YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVH 343
Y ++ N+Y+ G+WE+V+R+R ++K R + + PGC + + +VH
Sbjct: 459 YHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVH 503
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 184/344 (53%), Gaps = 33/344 (9%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LLH YA G+ R+AR +FD+MP+R TWN MI GY + +D N R
Sbjct: 153 LLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG-----GYC-SHKD----KGNHNARKA 202
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+ + CG G +P + T+V VL A +Q G LE G VH + +
Sbjct: 203 MVLFRRFSCCG--------------SGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEK 248
Query: 122 NGFLR--NVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
GF +V++ AL+DMY KCGCL + VFE M+ + V +W+SM G A++
Sbjct: 249 LGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETP 308
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M G+KPN +TF +L A H+GLV++G L M+ +G+ P +EHYGC+VDL
Sbjct: 309 NLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDL 368
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY- 298
L +AGR++EA + I M + P+ ++ +L C ++ V+ EE + L +++ ++
Sbjct: 369 LGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLS 428
Query: 299 ------YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSI 336
YV +SNV A GKW EV ++R+ MK R +K PG S +
Sbjct: 429 GSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 117/336 (34%), Positives = 193/336 (57%), Gaps = 3/336 (0%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS 60
+L+ Y +C E + AR FD MPQ++ +W MI+ +G V +A +LF M +++
Sbjct: 237 ILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLV 296
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGS--KPNEVTVVAVLVACAQLGDLEFGKSVHRF 118
+ ++I + G ++ALK+F++M + S +P+E+T+ +V+ A +QLG+ FG V +
Sbjct: 297 YDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESY 356
Query: 119 AKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXX 178
+G + + +LID+Y+K G + +++F + ++ VS+S+MI+G ++
Sbjct: 357 ITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEA 416
Query: 179 XXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVD 238
MI + PN VTF G+L A SH GLV +G M+ D+ + P +HYG +VD
Sbjct: 417 NSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMK-DHNLEPSADHYGIMVD 475
Query: 239 LLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY 298
+L RAGRLEEA E+I +M + PN VWGALL LH N+ E A H KL+ GY
Sbjct: 476 MLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGY 535
Query: 299 YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCS 334
++ +Y+ G+W++ +R +K + + KT GCS
Sbjct: 536 LSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCS 571
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 133/329 (40%), Gaps = 30/329 (9%)
Query: 14 HARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGM 73
H L F K R+I T+ I N D FS W ++ L++
Sbjct: 40 HQTLHFTKEFSRNIVTYVKRILKGFN------GHDSFS---------WGCLVRFLSQHRK 84
Query: 74 CEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNA 133
+E + V+ +M G P+ V +VL AC ++ ++ GK +H A NG VYV
Sbjct: 85 FKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTG 144
Query: 134 LIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPN 193
L+ +Y + G +E + F+ + E+ VSW+S++ G+ + + +
Sbjct: 145 LVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIP----EKD 200
Query: 194 YVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVI 253
V++ ++ + + G + +L + M + + L+ ++ AR
Sbjct: 201 AVSWNLIISSYAKKGDMGNACSLFSAMP-----LKSPASWNILIGGYVNCREMKLARTYF 255
Query: 254 ANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWE 313
M N V W ++ G ++ AEE R +SK D L Y M Y + GK +
Sbjct: 256 DAMP-QKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKL---VYDAMIACYTQNGKPK 311
Query: 314 EVSRIRRLMKSRGVKKTPGCSSITIDGVV 342
+ ++ M R P IT+ VV
Sbjct: 312 DALKLFAQMLERNSYIQP--DEITLSSVV 338
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 218 bits (556), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 177/299 (59%), Gaps = 1/299 (0%)
Query: 38 INVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVV 97
+++G + AR LF MP R+ +T++ G + G L +F EM G + V +V
Sbjct: 180 VDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMV 239
Query: 98 AVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER 157
++L+AC QLG L+ GKSVH + + + NA+ DMYVKC L+ + VF M R
Sbjct: 240 SLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRR 299
Query: 158 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL 217
V+SWSS+I+G+ + M++ G++PN VTF+GVL AC+H GLV+K
Sbjct: 300 DVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYF 359
Query: 218 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKN 277
+M+ +Y IVP ++HY + D +SRAG LEEA + + +M V P+ V GA+L GC+++ N
Sbjct: 360 RLMQ-EYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGN 418
Query: 278 IVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSI 336
+ + E R L +L YYV ++ +Y+ AG+++E +R+ MK + + K PGCSSI
Sbjct: 419 VEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 110/235 (46%), Gaps = 3/235 (1%)
Query: 48 DLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGS-KPNEVTVVAVLVACAQL 106
+F MP RN+ SW +I ++ G +++ +F M ++ +P++ T+ +L AC+
Sbjct: 88 SVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSAS 147
Query: 107 GDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMI 166
+ + G +H GF +++V +AL+ MYV G L ++F+ M R V +++M
Sbjct: 148 REAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMF 207
Query: 167 VGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGI 226
G+ M G + V + +L AC +G + G+++ R
Sbjct: 208 GGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSC 267
Query: 227 VPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLA 281
+ G+ + D+ + L+ A V NMS + + W +L+ G L ++V++
Sbjct: 268 L-GLNLGNAITDMYVKCSILDYAHTVFVNMS-RRDVISWSSLILGYGLDGDVVMS 320
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 218 bits (556), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 191/370 (51%), Gaps = 32/370 (8%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y+ C + RHA ++F + + + TWN
Sbjct: 321 LITMYSKCKDLRHALIVFRQTEENSLCTWN------------------------------ 350
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA-K 120
S+I G A+ EEA + EM G +PN +T+ ++L CA++ +L+ GK H + +
Sbjct: 351 -SIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILR 409
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
F + N+L+D+Y K G + +V + M +R V+++S+I G+
Sbjct: 410 RKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALA 469
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M R G+KP++VT + VL ACSH LV +G L M+ +YGI P ++H+ C+VDL
Sbjct: 470 LFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLY 529
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYV 300
RAG L +A+++I NM P+ W LL C +H N + + A L ++ N GYYV
Sbjct: 530 GRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYV 589
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFE 360
+++N+YA AG W +++ +R +M+ GVKK PGC+ I D F GD + P+A +
Sbjct: 590 LIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYP 649
Query: 361 MWEKLLVKMK 370
+ + L MK
Sbjct: 650 LLDGLNQLMK 659
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 126/266 (47%), Gaps = 15/266 (5%)
Query: 15 ARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSM----PQRNVRSWTSVIYGLAK 70
AR +FD+M +RD +WN +I + G A +LF M + +V +W + G +
Sbjct: 198 ARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQ 257
Query: 71 CGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYV 130
G AL + S M + + V ++ L AC+ +G + GK +H A + + V
Sbjct: 258 TGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNV 317
Query: 131 CNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGM 190
N LI MY KC L VF E ++ +W+S+I G+A M+ G
Sbjct: 318 RNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGF 377
Query: 191 KPNYVTFIGVLHACSHVGLVDKGRAL-LTIMRR----DYGIVPGVEHYGCLVDLLSRAGR 245
+PN +T +L C+ + + G+ I+RR DY ++ + LVD+ +++G+
Sbjct: 378 QPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTML-----WNSLVDVYAKSGK 432
Query: 246 LEEAREVIANMSVPPNRVVWGALLGG 271
+ A++V MS + V + +L+ G
Sbjct: 433 IVAAKQVSDLMS-KRDEVTYTSLIDG 457
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 6/175 (3%)
Query: 48 DLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLG 107
D+ +P W +I AK + EE + + M G +P+ T +VL AC +
Sbjct: 105 DILHPLP------WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETL 158
Query: 108 DLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIV 167
D+ FG+ VH + + + ++YVCNALI MY + + R+F+ M ER VSW+++I
Sbjct: 159 DVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVIN 218
Query: 168 GFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR 222
+A M G++ + +T+ + C G L++ MR
Sbjct: 219 CYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRN 273
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 218 bits (555), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 169/294 (57%), Gaps = 4/294 (1%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGD 108
+FS + + W+++I G + + +AL +F M ++ +PN T+ ++L A A L D
Sbjct: 376 VFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALAD 435
Query: 109 LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER----TVVSWSS 164
L ++H + GF+ ++ L+ +Y KCG LE +++F G++E+ VV W +
Sbjct: 436 LRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGA 495
Query: 165 MIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDY 224
+I G+ MH M+R G+ PN +TF L+ACSH GLV++G L M Y
Sbjct: 496 LISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHY 555
Query: 225 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEA 284
+ HY C+VDLL RAGRL+EA +I + P VWGALL C H+N+ L E A
Sbjct: 556 KTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMA 615
Query: 285 MRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITI 338
L +L+ N G YV+++N+YA G+W+++ ++R +M++ G++K PG S+I I
Sbjct: 616 ANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 120/248 (48%), Gaps = 2/248 (0%)
Query: 25 RDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM 84
RD N ++A +N G V ARD+F M R+V SW ++I G + G +AL +F M
Sbjct: 150 RDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWM 209
Query: 85 EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCL 144
+ + T+V++L C L DLE G++VH+ + + V NAL++MY+KCG +
Sbjct: 210 VNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRM 269
Query: 145 EEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHAC 204
+E VF+ M R V++W+ MI G+ M G++PN VT ++ C
Sbjct: 270 DEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVC 329
Query: 205 SHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV 264
V+ G+ L R + + L+ + ++ R++ V + S +
Sbjct: 330 GDALKVNDGKCLHGWAVRQQ-VYSDIIIETSLISMYAKCKRVDLCFRVFSGAS-KYHTGP 387
Query: 265 WGALLGGC 272
W A++ GC
Sbjct: 388 WSAIIAGC 395
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 115/233 (49%), Gaps = 4/233 (1%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK--PNEVTVVA 98
G++ AR LF MPQ ++ S+ VI + G+ +A+ VF M +G K P+ T
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 99 VLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERT 158
V A +L ++ G VH + F R+ YV NAL+ MY+ G +E VF+ M+ R
Sbjct: 123 VAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRD 182
Query: 159 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT 218
V+SW++MI G+ + M+ + ++ T + +L C H+ ++ GR +
Sbjct: 183 VISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHK 242
Query: 219 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
++ + +E LV++ + GR++EAR V M + + W ++ G
Sbjct: 243 LVEEKR-LGDKIEVKNALVNMYLKCGRMDEARFVFDRME-RRDVITWTCMING 293
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 124/264 (46%), Gaps = 6/264 (2%)
Query: 16 RLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCE 75
+L+ +K I N ++ + G + AR +F M +R+V +WT +I G + G E
Sbjct: 242 KLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVE 301
Query: 76 EALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALI 135
AL++ M+ +G +PN VT+ +++ C + GK +H +A ++ + +LI
Sbjct: 302 NALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLI 361
Query: 136 DMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYV 195
MY KC ++ +RVF G + WS++I G + M R ++PN
Sbjct: 362 SMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIA 421
Query: 196 TFIGVLHACSHVGLVDKGRAL-LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV-- 252
T +L A + L D +A+ + G + ++ LV + S+ G LE A ++
Sbjct: 422 TLNSLLPA--YAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFN 479
Query: 253 -IANMSVPPNRVVWGALLGGCRLH 275
I + V+WGAL+ G +H
Sbjct: 480 GIQEKHKSKDVVLWGALISGYGMH 503
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 218 bits (555), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 117/361 (32%), Positives = 202/361 (55%), Gaps = 2/361 (0%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G + H L +P ++ ++ VG++ A +FS M + SW S+I G A
Sbjct: 236 GRSVHGYLYRTGLPM-NVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFA 294
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
+ G+ +A + EM+ G +P+ VT+V VLVAC+Q+G L+ G+ VH + L V
Sbjct: 295 QNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRV- 353
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
AL+DMY KCG L +FE + + +V W++MI + +H M
Sbjct: 354 TATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESN 413
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
++P++ TF +L A SH GLV++G+ ++M Y I P +HY CL+DLL+RAGR+EEA
Sbjct: 414 IEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEA 473
Query: 250 REVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEA 309
++I + + +W ALL GC H+N+ + + A + +L+ + G ++SN +A A
Sbjct: 474 LDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATA 533
Query: 310 GKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKM 369
KW+EV+++R+LM++ ++K PG S+I ++G + F+ D +H + + ++ L ++
Sbjct: 534 NKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTEI 593
Query: 370 K 370
+
Sbjct: 594 R 594
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 124/238 (52%), Gaps = 5/238 (2%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + A LF M +R+V WT+++ G A+ G +A++ + EM+ +G + V ++ +L
Sbjct: 165 GKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLL 224
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
A LGD + G+SVH + G NV V +L+DMY K G +E RVF M +T V
Sbjct: 225 QASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAV 284
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL-LTI 219
SW S+I GFA + M +G +P+ VT +GVL ACS VG + GR + I
Sbjct: 285 SWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYI 344
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKN 277
++R V L+D+ S+ G L +RE+ ++ + V W ++ +H N
Sbjct: 345 LKRH---VLDRVTATALMDMYSKCGALSSSREIFEHVG-RKDLVCWNTMISCYGIHGN 398
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 121/239 (50%), Gaps = 2/239 (0%)
Query: 33 MIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPN 92
+IA +G + AR +F +PQR V + S+I ++ +E L+++ +M + +P+
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPD 115
Query: 93 EVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE 152
T + AC LE G++V A G+ +V+VC++++++Y+KCG ++E +F
Sbjct: 116 SSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFG 175
Query: 153 GMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDK 212
M +R V+ W++M+ GFA M G + V +G+L A +G
Sbjct: 176 KMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKM 235
Query: 213 GRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
GR++ + R G+ V LVD+ ++ G +E A V + M + V WG+L+ G
Sbjct: 236 GRSVHGYLYRT-GLPMNVVVETSLVDMYAKVGFIEVASRVFSRM-MFKTAVSWGSLISG 292
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/361 (34%), Positives = 185/361 (51%), Gaps = 34/361 (9%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIA-TWNIMIAHLINVGYVGAARDLFSSMPQRNVRS 60
L+ LY CGE A +F K Q+D+A +WN+MI+ I+VG +
Sbjct: 350 LIDLYFKCGEANLAETVFSK-TQKDVAESWNVMISSYISVG------------------N 390
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
W +A++V+ +M G KP+ VT +VL AC+QL LE GK +H
Sbjct: 391 WF-------------KAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSIS 437
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
+ + + +AL+DMY KCG +E +R+F + ++ VVSW+ MI + H
Sbjct: 438 ESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALY 497
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M + G+KP+ VT + VL AC H GL+D+G + MR YGI P +EHY C++D+L
Sbjct: 498 QFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDIL 557
Query: 241 SRAGRLEEAREVIANM-SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY 299
RAGRL EA E+I N + L C LH L + R L + + Y
Sbjct: 558 GRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTY 617
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIF 359
+V+ N+YA W+ R+R MK G++K PGCS I + V F A D +H +A+ ++
Sbjct: 618 MVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVY 677
Query: 360 E 360
E
Sbjct: 678 E 678
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 3/208 (1%)
Query: 48 DLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLG 107
+F MP+R+V SW +VI + G E+AL++F ME G +PN V++ + AC++L
Sbjct: 163 QVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLL 222
Query: 108 DLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIV 167
LE GK +HR GF + YV +AL+DMY KC CLE VF+ M +++V+W+SMI
Sbjct: 223 WLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIK 282
Query: 168 GFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIV 227
G+ MI G +P+ T +L ACS + G+ + + R +V
Sbjct: 283 GYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIR--SVV 340
Query: 228 PGVEHYGC-LVDLLSRAGRLEEAREVIA 254
+ C L+DL + G A V +
Sbjct: 341 NADIYVNCSLIDLYFKCGEANLAETVFS 368
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 128/258 (49%), Gaps = 14/258 (5%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR++F MP++++ +W S+I G G + +++ + M +G++P++ T+ ++L+AC++
Sbjct: 262 AREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSR 321
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
+L GK +H + + ++YV +LID+Y KCG VF ++ SW+ M
Sbjct: 322 SRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVM 381
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL-LTI----M 220
I + M+ VG+KP+ VTF VL ACS + ++KG+ + L+I +
Sbjct: 382 ISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRL 441
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV-WGALLGGCRLHKNIV 279
D ++ L+D+ S+ G +EA + S+P VV W ++ H
Sbjct: 442 ETDELLLSA------LLDMYSKCGNEKEAFRIFN--SIPKKDVVSWTVMISAYGSHGQPR 493
Query: 280 LAEEAMRHLSKLDLLNDG 297
A + K L DG
Sbjct: 494 EALYQFDEMQKFGLKPDG 511
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 119/255 (46%), Gaps = 14/255 (5%)
Query: 24 QRDIATWNIMIAHLINVGYVG----AARDLFSSMPQR-NVRSWTSVIYGLAKCGMCEEAL 78
+RD+ ++ LINV + +AR +F + R +V W S++ G +K M + L
Sbjct: 36 RRDV----VLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTL 91
Query: 79 KVFSEMEKDG-SKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDM 137
+VF + P+ T V+ A LG G+ +H +G++ +V V ++L+ M
Sbjct: 92 EVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGM 151
Query: 138 YVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTF 197
Y K E +VF+ M ER V SW+++I F M G +PN V+
Sbjct: 152 YAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSL 211
Query: 198 IGVLHACSHVGLVDKGRAL-LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM 256
+ ACS + +++G+ + +++ + + V LVD+ + LE AREV M
Sbjct: 212 TVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN--SALVDMYGKCDCLEVAREVFQKM 269
Query: 257 SVPPNRVVWGALLGG 271
+ V W +++ G
Sbjct: 270 P-RKSLVAWNSMIKG 283
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 127/369 (34%), Positives = 190/369 (51%), Gaps = 5/369 (1%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+R + ++ G + AR F + +R+V WTS+I G + EEAL ++
Sbjct: 354 ERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRR 413
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M+ G PN+ T+ +VL AC+ L LE GK VH +GF V + +AL MY KCG
Sbjct: 414 MKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGS 473
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
LE+G VF + VVSW++MI G + + M+ GM+P+ VTF+ ++ A
Sbjct: 474 LEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISA 533
Query: 204 CSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRV 263
CSH G V++G +M G+ P V+HY C+VDLLSRAG+L+EA+E I + ++
Sbjct: 534 CSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLC 593
Query: 264 VWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMK 323
+W LL C+ H L A L L YV +S +Y G+ +V R+ + M+
Sbjct: 594 LWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMR 653
Query: 324 SRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLL 383
+ GV K GCS I + H FV GD HP + K LV + + I + V +L
Sbjct: 654 ANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEET-----KDLVCLVSRQMIEEGFVTVL 708
Query: 384 DLEDAKQKE 392
D +++E
Sbjct: 709 DSSFVEEEE 717
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 125/248 (50%), Gaps = 8/248 (3%)
Query: 27 IATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEK 86
+A N ++ + A +F S RN +W++++ G ++ G EA+K+FS M
Sbjct: 256 VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFS 315
Query: 87 DGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEE 146
G KP+E T+V VL AC+ + LE GK +H F GF R+++ AL+DMY K GCL +
Sbjct: 316 AGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLAD 375
Query: 147 GYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSH 206
+ F+ ++ER V W+S+I G+ + M G+ PN T VL ACS
Sbjct: 376 ARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSS 435
Query: 207 VGLVDKGRALLT-IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR--V 263
+ ++ G+ + ++ +G+ + L + S+ G LE+ V PN+ V
Sbjct: 436 LATLELGKQVHGHTIKHGFGLEVPIG--SALSTMYSKCGSLEDGNLVFRR---TPNKDVV 490
Query: 264 VWGALLGG 271
W A++ G
Sbjct: 491 SWNAMISG 498
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 131/262 (50%), Gaps = 5/262 (1%)
Query: 13 RHARLMFDKMPQ-RDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKC 71
R A + KM DI ++ G V +F+ MP+RN +W++++ G A
Sbjct: 138 RQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATR 197
Query: 72 GMCEEALKVFSEM--EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
G EEA+KVF+ EK+ ++ AVL + A + G+ +H NG L V
Sbjct: 198 GRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVA 257
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
+ NAL+ MY KC L E ++F+ +R ++WS+M+ G++ + M G
Sbjct: 258 LSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAG 317
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
+KP+ T +GVL+ACS + +++G+ L + + + G + LVD+ ++AG L +A
Sbjct: 318 IKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK-LGFERHLFATTALVDMYAKAGCLADA 376
Query: 250 REVIANMSVPPNRVVWGALLGG 271
R+ + + +W +L+ G
Sbjct: 377 RKGFDCLQ-ERDVALWTSLISG 397
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 113/247 (45%), Gaps = 9/247 (3%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEA---LKVFSEMEKD 87
N+++ G + A +F+++ ++V SW S+I G ++ G + +++F EM
Sbjct: 53 NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ 112
Query: 88 GSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEG 147
PN T+ + A + L G+ H ++YV +L+ MY K G +E+G
Sbjct: 113 DILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDG 172
Query: 148 YRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR---VGMKPNYVTFIGVLHAC 204
+VF M ER +WS+M+ G+A +R G +YV F VL +
Sbjct: 173 LKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSL 231
Query: 205 SHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV 264
+ V GR + I ++ G++ V LV + S+ L EA ++ + S N +
Sbjct: 232 AATIYVGLGRQIHCITIKN-GLLGFVALSNALVTMYSKCESLNEACKMF-DSSGDRNSIT 289
Query: 265 WGALLGG 271
W A++ G
Sbjct: 290 WSAMVTG 296
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 17/191 (8%)
Query: 90 KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYR 149
P+ T++ L +Q +L G++VH G + N L++ Y KCG L + +
Sbjct: 11 NPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHS 70
Query: 150 VFEGMRERTVVSWSSMIVGFAMH---XXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSH 206
+F + + VVSW+S+I G++ + M + PN T G+ A S
Sbjct: 71 IFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESS 130
Query: 207 VGLVDKGRALLTIMRRDYGIVPGVEHYG------CLVDLLSRAGRLEEAREVIANMSVPP 260
+ T+ R+ + +V + +G LV + +AG +E+ +V A M
Sbjct: 131 L-------QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ER 182
Query: 261 NRVVWGALLGG 271
N W ++ G
Sbjct: 183 NTYTWSTMVSG 193
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 215 bits (548), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 105/280 (37%), Positives = 155/280 (55%), Gaps = 1/280 (0%)
Query: 57 NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH 116
NV +W ++I C E+A+ +F M + KP+ +T+V +L+AC G LE G+ +H
Sbjct: 497 NVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIH 556
Query: 117 RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXX 176
R+ N+ + ALIDMY KCG LE+ +F+ ++ V W+ MI G+ MH
Sbjct: 557 RYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVE 616
Query: 177 XXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCL 236
M +KP TF+ +L AC+H GLV++G+ L M + Y + P ++HY CL
Sbjct: 617 SAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ-YDVKPNLKHYSCL 675
Query: 237 VDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLND 296
VDLLSR+G LEEA + +M P+ V+WG LL C H + D ND
Sbjct: 676 VDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQND 735
Query: 297 GYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSI 336
GYY++++N+Y+ AGKWEE R R +M+ GV K G S +
Sbjct: 736 GYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 109/256 (42%), Gaps = 14/256 (5%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
R+ A + G++ A +F MP R+V +WT++I G + G E L +
Sbjct: 158 DRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCK 217
Query: 84 MEKDGS---KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVK 140
M GS KPN T+ AC+ LG L+ G+ +H FA NG + +V +++ Y K
Sbjct: 218 MHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSK 277
Query: 141 CGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGV 200
G E Y F + + + SW+S+I A M GM P+ V +
Sbjct: 278 SGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCL 337
Query: 201 LHACSHVGLVDKGRALLTIMRR-----DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 255
++ + LV +G+A + R D + + C +LLS A +L
Sbjct: 338 INELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKL------FCR 391
Query: 256 MSVPPNRVVWGALLGG 271
+S N+ W +L G
Sbjct: 392 ISEEGNKEAWNTMLKG 407
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 143/322 (44%), Gaps = 17/322 (5%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQR-NVRSWTSVIYGLAKCGMCEEALKVFSEM 84
D N +++ + A LF + + N +W +++ G K + +++F ++
Sbjct: 365 DSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKI 424
Query: 85 EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCL 144
+ G + + + +V+ +C+ +G + GKS+H + + V N+LID+Y K G L
Sbjct: 425 QNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDL 484
Query: 145 EEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHAC 204
+R+F + V++W++MI + M+ KP+ +T + +L AC
Sbjct: 485 TVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMAC 543
Query: 205 SHVGLVDKGRALLTIMRRDYGIVPGVEH------YGCLVDLLSRAGRLEEAREVIANMSV 258
+ G +++G+ + + + EH L+D+ ++ G LE++RE+ +
Sbjct: 544 VNTGSLERGQMI-------HRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELF-DAGN 595
Query: 259 PPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG-YYVVMSNVYAEAGKWEEVSR 317
+ V W ++ G +H ++ A + + D+ G ++ + + AG E+ +
Sbjct: 596 QKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKK 655
Query: 318 IRRLMKSRGVKKTPGCSSITID 339
+ M VK S +D
Sbjct: 656 LFLKMHQYDVKPNLKHYSCLVD 677
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 102/241 (42%), Gaps = 5/241 (2%)
Query: 13 RHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCG 72
+H L+ +I + +I+ + G + +F + +R++ W S+I G
Sbjct: 45 KHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNG 104
Query: 73 MCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA-KGNGFLRNVYVC 131
+L F M G P+ T V+ ACA+L G VH K GF RN V
Sbjct: 105 DYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVG 164
Query: 132 NALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGM- 190
+ + Y KCG L++ VF+ M +R VV+W+++I G + M G
Sbjct: 165 ASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSD 224
Query: 191 --KPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEE 248
KPN T ACS++G + +GR L ++ G+ + S++G E
Sbjct: 225 VDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKN-GLASSKFVQSSMFSFYSKSGNPSE 283
Query: 249 A 249
A
Sbjct: 284 A 284
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 47/199 (23%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVR-- 59
L+ +YA CG +R +FD Q+D WN+MI+ G V +A LF M + +V+
Sbjct: 574 LIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPT 633
Query: 60 --SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPN--------------------EVTVV 97
++ +++ G+ E+ K+F +M + KPN E TV+
Sbjct: 634 GPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVM 693
Query: 98 A------------VLVACAQLGDLEFG-----KSVHRFAKGNGFLRNVYVCNALIDMYVK 140
+ +L +C G+ E G ++V + +G+ Y+ L +MY
Sbjct: 694 SMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGY----YI--MLANMYSA 747
Query: 141 CGCLEEGYRVFEGMRERTV 159
G EE R E MRE V
Sbjct: 748 AGKWEEAERAREMMRESGV 766
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 215 bits (547), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 174/311 (55%), Gaps = 8/311 (2%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ D +I++ NVG + A LF +P +++ +++ +I G K G A +F E
Sbjct: 374 ELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRE 433
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
+ K G ++ V +L C+ L L +GK +H G+ AL+DMYVKCG
Sbjct: 434 LIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGE 493
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
++ G +F+GM ER VVSW+ +IVGF + MI +G++PN VTF+G+L A
Sbjct: 494 IDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSA 553
Query: 204 CSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRV 263
C H GL+++ R+ L M+ +YG+ P +EHY C+VDLL +AG +EA E+I M + P++
Sbjct: 554 CRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKT 613
Query: 264 VWGALLGGCRLHKN----IVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIR 319
+W +LL C HKN V+AE+ ++ + Y +SN YA G W+++S++R
Sbjct: 614 IWTSLLTACGTHKNAGLVTVIAEKLLKGFPD----DPSVYTSLSNAYATLGMWDQLSKVR 669
Query: 320 RLMKSRGVKKT 330
K G K++
Sbjct: 670 EAAKKLGAKES 680
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 148/351 (42%), Gaps = 25/351 (7%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++ +Y G A F ++ + +WN +I+ G + A LF MPQ NV SW
Sbjct: 148 VVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSW 207
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+I G G AL+ M+++G + + L AC+ G L GK +H
Sbjct: 208 NCLISGFVDKG-SPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVK 266
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR---ERTVVSWSSMIVGFAMHXXXXXX 178
+G + + +ALIDMY CG L VF + +V W+SM+ GF ++
Sbjct: 267 SGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAA 326
Query: 179 XXXXXXMIRVGMKPNYVTFIGVLHACSH-----VGLVDKGRALLTIMRRDYGIVPGVEHY 233
+ + + + T G L C + +GL +++ DY IV +
Sbjct: 327 LWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDY-IVGSI--- 382
Query: 234 GCLVDLLSRAGRLEEAREVIANMSVPPNR--VVWGALLGGCRLHKNIVLAEEAMRHLSKL 291
LVDL + G +++A ++ + PN+ + + L+ GC LA R L KL
Sbjct: 383 --LVDLHANVGNIQDAHKLFHRL---PNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKL 437
Query: 292 DLLNDGYYVVMSNVYAEAGKWEEVS---RIRRLMKSRGVKKTPGCSSITID 339
L D + ++SN+ + +I L +G + P ++ +D
Sbjct: 438 GLDADQF--IVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVD 486
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 142/325 (43%), Gaps = 41/325 (12%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
GE+ A ++ + Q ++ N +I+ ++ + A +F M +RN+ +WT+++ G
Sbjct: 24 GESIQAHVIKQGISQ-NVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYT 82
Query: 70 KCGMCEEALKVFSEM-EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH-RFAKGNGFLR- 126
G +A++++ M + + NE AVL AC +GD++ G V+ R K N LR
Sbjct: 83 SDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKEN--LRG 140
Query: 127 NVYVCNALIDMYV-------------------------------KCGCLEEGYRVFEGMR 155
+V + N+++DMYV K G ++E +F M
Sbjct: 141 DVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMP 200
Query: 156 ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRA 215
+ VVSW+ +I GF + M R G+ + L ACS GL+ G+
Sbjct: 201 QPNVVSWNCLISGF-VDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQ 259
Query: 216 LLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVI--ANMSVPPNRVVWGALLGGCR 273
L + + G+ L+D+ S G L A +V ++V + VW ++L G
Sbjct: 260 LHCCVVKS-GLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFL 318
Query: 274 LHKNIVLAEEAMRHLSKLDLLNDGY 298
+++ A + + + DL D Y
Sbjct: 319 INEENEAALWLLLQIYQSDLCFDSY 343
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 3/177 (1%)
Query: 96 VVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR 155
+ A L C ++ + G+S+ G +NV++ N +I MYV L + ++VF+ M
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMS 67
Query: 156 ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMK-PNYVTFIGVLHACSHVGLVDKGR 214
ER +V+W++M+ G+ M+ + N + VL AC VG + G
Sbjct: 68 ERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGI 127
Query: 215 ALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ + ++ + V +VD+ + GRL EA + + P+ W L+ G
Sbjct: 128 LVYERIGKE-NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTLISG 182
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 7/200 (3%)
Query: 17 LMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEE 76
L K + + T ++ + G + LF M +R+V SWT +I G + G EE
Sbjct: 468 LCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEE 527
Query: 77 ALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNV---YVCNA 133
A + F +M G +PN+VT + +L AC G LE +S K L Y C
Sbjct: 528 AFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYC-- 585
Query: 134 LIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKP 192
++D+ + G +E + M E W+S++ H +++ G
Sbjct: 586 VVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLK-GFPD 644
Query: 193 NYVTFIGVLHACSHVGLVDK 212
+ + + +A + +G+ D+
Sbjct: 645 DPSVYTSLSNAYATLGMWDQ 664
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 159/390 (40%), Gaps = 59/390 (15%)
Query: 39 NVGYVGAARDLFSSMP---QRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVT 95
N G + A D+F +V W S++ G E AL + ++ + + T
Sbjct: 285 NCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYT 344
Query: 96 VVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR 155
+ L C +L G VH +G+ + V + L+D++ G +++ +++F +
Sbjct: 345 LSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLP 404
Query: 156 ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRA 215
+ ++++S +I G +I++G+ + +L CS + + G+
Sbjct: 405 NKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQ 464
Query: 216 LLTI-MRRDYGIVP------------------GVEHYGCLV--DLLS---------RAGR 245
+ + +++ Y P GV + ++ D++S + GR
Sbjct: 465 IHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGR 524
Query: 246 LEEAREV---IANMSVPPNRVVWGALLGGCRLHKNIVLAE----EAMRHLSKLDLLNDGY 298
+EEA + N+ + PN+V + LL CR H ++ E M+ L+ + Y
Sbjct: 525 VEEAFRYFHKMINIGIEPNKVTFLGLLSACR-HSGLLEEARSTLETMKSEYGLEPYLEHY 583
Query: 299 YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGI 358
Y V+ ++ +AG ++E + + M KT S +T G TH A +
Sbjct: 584 YCVV-DLLGQAGLFQEANELINKMPLEP-DKTIWTSLLTACG----------THKNAGLV 631
Query: 359 FEMWEKLLVKMKMKGYIPDTSVVLLDLEDA 388
+ EKLL KG+ PD V L +A
Sbjct: 632 TVIAEKLL-----KGF-PDDPSVYTSLSNA 655
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/333 (33%), Positives = 183/333 (54%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL +Y+ CG A +F ++ D N MI + G + A+ +F + +++ SW
Sbjct: 359 LLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISW 418
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
S+ G ++ G E L+ F +M K +EV++ +V+ ACA + LE G+ V A
Sbjct: 419 NSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATI 478
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
G + V ++LID+Y KCG +E G RVF+ M + V W+SMI G+A +
Sbjct: 479 VGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDL 538
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M G++P +TF+ VL AC++ GLV++GR L M+ D+G VP EH+ C+VDLL+
Sbjct: 539 FKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLA 598
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RAG +EEA ++ M + +W ++L GC + + ++A + +L+ N YV
Sbjct: 599 RAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQ 658
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCS 334
+S ++A +G WE + +R+LM+ V K PG S
Sbjct: 659 LSAIFATSGDWESSALVRKLMRENNVTKNPGSS 691
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 142/304 (46%), Gaps = 40/304 (13%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+++YA CG+ R A M +++ + D + + +I+ N G V +R LF R V W
Sbjct: 228 LVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILW 287
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
S+I G M EAL +F+EM ++ ++ + T+ AV+ AC LG LE GK +H A
Sbjct: 288 NSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIGLGFLETGKQMHCHACK 346
Query: 122 NGFLRNVYVCNALIDMYVKCGC-------------------------------LEEGYRV 150
G + ++ V + L+DMY KCG +++ RV
Sbjct: 347 FGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRV 406
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
FE + ++++SW+SM GF+ + M ++ + + V+ V+ AC+ + +
Sbjct: 407 FERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSL 466
Query: 211 DKGRALL---TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGA 267
+ G + TI+ D V L+DL + G +E R V M V + V W +
Sbjct: 467 ELGEQVFARATIVGLDSDQVVS----SSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNS 521
Query: 268 LLGG 271
++ G
Sbjct: 522 MISG 525
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 128/275 (46%), Gaps = 36/275 (13%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
Y + GE + FD MP+RD +WN++++ G + AR LF++MP+++V + S++
Sbjct: 103 YMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLL 162
Query: 66 YGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRF------- 118
+G G EEAL++F E+ + +T+ VL ACA+L L+ GK +H
Sbjct: 163 HGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVE 219
Query: 119 --AKGNGFLRNVYV----------------------CNALIDMYVKCGCLEEGYRVFEGM 154
+K N L NVY +ALI Y CG + E +F+
Sbjct: 220 CDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRK 279
Query: 155 RERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGR 214
R V+ W+SMI G+ + M R + + T V++AC +G ++ G+
Sbjct: 280 SNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIGLGFLETGK 338
Query: 215 ALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
+ + +G++ + L+D+ S+ G EA
Sbjct: 339 QMHCHACK-FGLIDDIVVASTLLDMYSKCGSPMEA 372
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/353 (33%), Positives = 181/353 (51%), Gaps = 39/353 (11%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMP------- 54
L+ +Y+ GE +AR +F + ++D+ +N MI+ N A +L M
Sbjct: 158 LIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPD 217
Query: 55 --------------------------------QRNVRSWTSVIYGLAKCGMCEEALKVFS 82
+ +V SWTS+I GL E+A F
Sbjct: 218 VITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFK 277
Query: 83 EMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG 142
+M G PN T++ +L AC L ++ GK +H ++ G + +V +AL+DMY KCG
Sbjct: 278 QMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCG 337
Query: 143 CLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLH 202
+ E +F ++T V+++SMI +A H M G K +++TF +L
Sbjct: 338 FISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILT 397
Query: 203 ACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR 262
ACSH GL D G+ L +M+ Y IVP +EHY C+VDLL RAG+L EA E+I M + P+
Sbjct: 398 ACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDL 457
Query: 263 VVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEV 315
VWGALL CR H N+ LA A +HL++L+ N G ++++++YA AG WE V
Sbjct: 458 FVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESV 510
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 153/337 (45%), Gaps = 17/337 (5%)
Query: 33 MIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPN 92
++ + G V AR +F MP+R++ +I A+ G +E+L F EM KDG K +
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLD 116
Query: 93 EVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE 152
V ++L A L D EFGK +H + + ++ ++LIDMY K G + +VF
Sbjct: 117 AFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFS 176
Query: 153 GMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDK 212
+ E+ +V +++MI G+A + M +G+KP+ +T+ ++ SH+ +K
Sbjct: 177 DLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEK 236
Query: 213 GRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNRVVWGALL 269
+L +M D G P V + ++ L + E+A + M + PN LL
Sbjct: 237 VSEILELMCLD-GYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLL 295
Query: 270 GGCRLHKNIVLAEEAMRHLSKLDLLNDGYY-VVMSNVYAEAGKWEEVSRIRRLMKSRGVK 328
C + +E + L + G+ + ++Y + G E + R
Sbjct: 296 PACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFR-------- 347
Query: 329 KTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKL 365
KTP +++T + ++ + H A E+++++
Sbjct: 348 KTPKKTTVTFNSMIFCYA----NHGLADKAVELFDQM 380
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 119/275 (43%), Gaps = 21/275 (7%)
Query: 112 GKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAM 171
G+ +H +G R + L+ YV+CG + + +VF+ M +R + MI A
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 172 HXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVE 231
+ M + G+K + +L A ++ + G+ + ++ + +
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLK-FSYESDAF 153
Query: 232 HYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL 291
L+D+ S+ G + AR+V +++ + VV+ A++ G + N A+EA+ + +
Sbjct: 154 IVSSLIDMYSKFGEVGNARKVFSDLG-EQDLVVFNAMISG---YANNSQADEALNLVKDM 209
Query: 292 DLLNDGYYVVMSNV----YAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVA 347
LL V+ N ++ E+VS I LM G K + I G+VH F
Sbjct: 210 KLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNF-- 267
Query: 348 GDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVL 382
Q + F+ ++++L G P+++ ++
Sbjct: 268 ------QNEKAFDAFKQMLT----HGLYPNSATII 292
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 199/384 (51%), Gaps = 21/384 (5%)
Query: 2 LLHLYASCGETRHARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMPQR- 56
LL YA G + A +F M ++ TWN++I L+ G V A+D+F M
Sbjct: 447 LLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSG 506
Query: 57 ---NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGK 113
N+ SWT+++ G+ + G EEA+ +M++ G +PN ++ L ACA L L G+
Sbjct: 507 IIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGR 566
Query: 114 SVHRFAKGNGFLRN------VYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIV 167
++H + +RN V + +L+DMY KCG + + +VF + ++MI
Sbjct: 567 TIHGY-----IIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMIS 621
Query: 168 GFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIV 227
+A++ + VG+KP+ +T VL AC+H G +++ + T + +
Sbjct: 622 AYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMK 681
Query: 228 PGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRH 287
P +EHYG +VDLL+ AG E+A +I M P+ + +L+ C + L + R
Sbjct: 682 PCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRK 741
Query: 288 LSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGV--VHEF 345
L + + N G YV +SN YA G W+EV ++R +MK++G+KK PGCS I I G VH F
Sbjct: 742 LLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVF 801
Query: 346 VAGDETHPQAKGIFEMWEKLLVKM 369
VA D+TH + I M LL M
Sbjct: 802 VANDKTHTRINEIQMMLALLLYDM 825
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 114/230 (49%), Gaps = 10/230 (4%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A LFS + RNV SW ++I + G+CE AL F EM ++ P+ V V AC
Sbjct: 126 AEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGA 185
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
L FG+ VH + +G V+V ++L DMY KCG L++ +VF+ + +R V+W+++
Sbjct: 186 LKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNAL 245
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
+VG+ + M + G++P VT L A +++G V++G+ I
Sbjct: 246 MVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAI-----A 300
Query: 226 IVPGVEHYG----CLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
IV G+E L++ + G +E A V M + V W ++ G
Sbjct: 301 IVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRM-FEKDVVTWNLIISG 349
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 121/253 (47%), Gaps = 5/253 (1%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + A +F +P RN +W +++ G + G EEA+++FS+M K G +P VTV L
Sbjct: 222 GVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCL 281
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
A A +G +E GK H A NG + + +L++ Y K G +E VF+ M E+ VV
Sbjct: 282 SASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVV 341
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
+W+ +I G+ M +K + VT ++ A + + G+ +
Sbjct: 342 TWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYC 401
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
R + + ++D+ ++ G + +A++V + +V + ++W LL + L
Sbjct: 402 IR-HSFESDIVLASTVMDMYAKCGSIVDAKKVF-DSTVEKDLILWNTLLAA---YAESGL 456
Query: 281 AEEAMRHLSKLDL 293
+ EA+R + L
Sbjct: 457 SGEALRLFYGMQL 469
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 154/337 (45%), Gaps = 44/337 (13%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL+ Y G +A ++FD+M ++D+ TWN++I+ GYV
Sbjct: 315 LLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIIS-----GYV------------------ 351
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+ G+ E+A+ + M + K + VT+ ++ A A+ +L+ GK V +
Sbjct: 352 --------QQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIR 403
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+ F ++ + + ++DMY KCG + + +VF+ E+ ++ W++++ +A
Sbjct: 404 HSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRL 463
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M G+ PN +T+ ++ + G VD+ + + M+ GI+P + + +++ +
Sbjct: 464 FYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS-GIIPNLISWTTMMNGMV 522
Query: 242 RAGRLEEAREVIANMS---VPPNRVVWGALLGGC----RLHKNIVLAEEAMRHLSKLDLL 294
+ G EEA + M + PN L C LH + +R+L L+
Sbjct: 523 QNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLV 582
Query: 295 NDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTP 331
+ +V ++YA+ G ++++ ++ S+ + P
Sbjct: 583 SIETSLV--DMYAKCG---DINKAEKVFGSKLYSELP 614
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 98/240 (40%), Gaps = 19/240 (7%)
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR-- 117
S+ + L K G +EAL + +EM+ + +L C DL GK +H
Sbjct: 37 SYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARI 96
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
G+ + RN Y+ L+ Y KC LE +F +R R V SW+++I
Sbjct: 97 LKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEG 156
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEH----Y 233
M+ + P+ V AC + GR + Y + G+E
Sbjct: 157 ALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGV-----HGYVVKSGLEDCVFVA 211
Query: 234 GCLVDLLSRAGRLEEAREVIANMSVPP-NRVVWGALL-GGCRLHKNIVLAEEAMRHLSKL 291
L D+ + G L++A +V +P N V W AL+ G + KN EEA+R S +
Sbjct: 212 SSLADMYGKCGVLDDASKVFD--EIPDRNAVAWNALMVGYVQNGKN----EEAIRLFSDM 265
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 211 bits (538), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 107/289 (37%), Positives = 158/289 (54%), Gaps = 1/289 (0%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK-PNEVTVVAVLVACAQLG 107
LF + + + SW SVI G + G A +VF +M G P+ +T+ ++L C+QL
Sbjct: 404 LFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLC 463
Query: 108 DLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIV 167
L GK +H + N F +VC ALIDMY KCG + VF+ ++ +W+SMI
Sbjct: 464 CLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMIS 523
Query: 168 GFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIV 227
G+++ M G+KP+ +TF+GVL AC+H G VD+G+ M +++GI
Sbjct: 524 GYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGIS 583
Query: 228 PGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRH 287
P ++HY +V LL RA EA +I M + P+ VWGALL C +H+ + + E R
Sbjct: 584 PTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARK 643
Query: 288 LSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSI 336
+ LD N G YV+MSN+YA W++V R+R +MK G G S I
Sbjct: 644 MFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 7/215 (3%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G V +A+ LF MP+R+ W ++I G ++ G +A K+F M + G P+ T+V +L
Sbjct: 99 GCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLL 158
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
C Q G + G+SVH A +G + V NALI Y KC L +F M++++ V
Sbjct: 159 PFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTV 218
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
SW++MI ++ M ++ + VT I +L A HV L +
Sbjct: 219 SWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA--HV-----SHEPLHCL 271
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 255
G+V + LV SR G L A + A+
Sbjct: 272 VVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYAS 306
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 118/254 (46%), Gaps = 9/254 (3%)
Query: 25 RDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM 84
DI+ ++ G + +A L++S Q ++ TS++ A+ G + A+ FS+
Sbjct: 279 NDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKT 338
Query: 85 EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCL 144
+ K + V +V +L C + ++ G S+H +A +G V N LI MY K +
Sbjct: 339 RQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDV 398
Query: 145 EEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRV-GMKPNYVTFIGVLHA 203
E +FE ++E ++SW+S+I G M+ G+ P+ +T +L
Sbjct: 399 ETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAG 458
Query: 204 CSHVGLVDKGRALL-TIMRRDYGIVPGVEHYGC--LVDLLSRAGRLEEAREVIANMSVPP 260
CS + ++ G+ L +R ++ E++ C L+D+ ++ G +A V ++ P
Sbjct: 459 CSQLCCLNLGKELHGYTLRNNF----ENENFVCTALIDMYAKCGNEVQAESVFKSIKAPC 514
Query: 261 NRVVWGALLGGCRL 274
W +++ G L
Sbjct: 515 T-ATWNSMISGYSL 527
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 7/210 (3%)
Query: 78 LKVFSEMEKDGSKPNEVTVVAVLVACA-QLGDLEFG-KSVHRFAKGNGFLRNVYVCNALI 135
+ +F ++ + PN T+ L A + + V +G R VYV +L+
Sbjct: 33 ITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLL 92
Query: 136 DMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYV 195
++Y+K GC+ +F+ M ER V W+++I G++ + M++ G P+
Sbjct: 93 NLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSAT 152
Query: 196 TFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 255
T + +L C G V +GR++ + + G+ + L+ S+ L A +
Sbjct: 153 TLVNLLPFCGQCGFVSQGRSVHGVAAKS-GLELDSQVKNALISFYSKCAELGSAEVLFRE 211
Query: 256 MSVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
M + V W ++G + L EEA+
Sbjct: 212 MK-DKSTVSWNTMIGA---YSQSGLQEEAI 237
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 211 bits (537), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 177/324 (54%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A +F+SM N+ +W S+I ++ + E ++ +F+ M G P+ V++ +VLVA +
Sbjct: 530 ALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISS 589
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
L GKS+H + G + ++ NALIDMYVKCG + +F+ M+ +++++W+ M
Sbjct: 590 TASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLM 649
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
I G+ H M + G P+ VTF+ ++ AC+H G V++G+ + M++DYG
Sbjct: 650 IYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYG 709
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
I P +EHY +VDLL RAG LEEA I M + + +W LL R H N+ L +
Sbjct: 710 IEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSA 769
Query: 286 RHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEF 345
L +++ YV + N+Y EAG E +++ LMK +G+ K PGCS I + + F
Sbjct: 770 EKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVF 829
Query: 346 VAGDETHPQAKGIFEMWEKLLVKM 369
+G + P IF + +L M
Sbjct: 830 FSGGSSSPMKAEIFNVLNRLKSNM 853
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 148/318 (46%), Gaps = 8/318 (2%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLIN-VGYVGAARDLFSSMPQRNVRSWTSVIYGL 68
G++ HA L K P + +T + L + G A +F SM ++++ +W S+I GL
Sbjct: 392 GKSVHAELF--KRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGL 449
Query: 69 AKCGMCEEALKVFSEMEKDGS--KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLR 126
K G +EALKVF +M+ D KP+ + +V ACA L L FG VH G +
Sbjct: 450 CKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVL 509
Query: 127 NVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI 186
NV+V ++LID+Y KCG E +VF M +V+W+SMI ++ + M+
Sbjct: 510 NVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLML 569
Query: 187 RVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRL 246
G+ P+ V+ VL A S + KG++L R GI L+D+ + G
Sbjct: 570 SQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLR-LGIPSDTHLKNALIDMYVKCGFS 628
Query: 247 EEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL-DLLNDGYYVVMSNV 305
+ A + M + + W ++ G H + + A + K + +D ++ + +
Sbjct: 629 KYAENIFKKMQ-HKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISA 687
Query: 306 YAEAGKWEEVSRIRRLMK 323
+G EE I MK
Sbjct: 688 CNHSGFVEEGKNIFEFMK 705
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 109/240 (45%), Gaps = 5/240 (2%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G VG A +FS + + + W +++ A+ AL +F M + P+ T+ V+
Sbjct: 321 GMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVI 380
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
C+ LG +GKSVH + +AL+ +Y KCGC + Y VF+ M E+ +V
Sbjct: 381 SCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMV 440
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMI--RVGMKPNYVTFIGVLHACSHVGLVDKGRALLT 218
+W S+I G + M +KP+ V +AC+ + + G +
Sbjct: 441 AWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHG 500
Query: 219 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNI 278
M + G+V V L+DL S+ G E A +V +MS N V W +++ C N+
Sbjct: 501 SMIKT-GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMST-ENMVAWNSMI-SCYSRNNL 557
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 4/218 (1%)
Query: 55 QRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKS 114
+ NV W +I G G+CE +L ++ + + K + L AC+Q + FG+
Sbjct: 234 KSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQ 293
Query: 115 VHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXX 174
+H G + YVC +L+ MY KCG + E VF + ++ + W++M+ +A +
Sbjct: 294 IHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDY 353
Query: 175 XXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL-LTIMRRDYGIVPGVEHY 233
M + + P+ T V+ CS +GL + G+++ + +R +E
Sbjct: 354 GYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIE-- 411
Query: 234 GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
L+ L S+ G +A V +M + V WG+L+ G
Sbjct: 412 SALLTLYSKCGCDPDAYLVFKSME-EKDMVAWGSLISG 448
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKP---NEVTVVAVLVACAQLGDLEFGKSVH 116
S S I L + G +AL ++S+ DGS P + T ++L AC+ L +L +GK++H
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSK--HDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIH 83
Query: 117 RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRE-------RTVVSWSSMIVGF 169
G+ + ++ +L++MYVKCG L+ +VF+G + R V W+SMI G+
Sbjct: 84 GSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGY 143
Query: 170 AMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV--DKGRALLTIMRRDYGIV 227
M+ G++P+ + V+ G ++G+ + M R+ +
Sbjct: 144 FKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRN-SLD 202
Query: 228 PGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
L+D+ + G +A V + N V+W ++ G
Sbjct: 203 TDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVG 246
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 211 bits (537), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 191/348 (54%), Gaps = 12/348 (3%)
Query: 27 IATWNIMIAHLINVGYVGAARDLFSSMPQR-NVRSWTSVIYGLAKCGMCEEALKVFSEME 85
I ++ +VG V AR +F P++ N+ WT++I + EA+++F ME
Sbjct: 100 IQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRME 159
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR--FAKGNGFLRNVYVCNALIDMYVKCGC 143
+ + + V V L ACA LG ++ G+ ++ + ++ + N+L++MYVK G
Sbjct: 160 AEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGE 219
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG------MKPNYVTF 197
E+ ++F+ + V +++SMI G+A++ M + + PN VTF
Sbjct: 220 TEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTF 279
Query: 198 IGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS 257
IGVL ACSH GLV++G+ M DY + P H+GC+VDL R+G L++A E I M
Sbjct: 280 IGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMP 339
Query: 258 VPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSR 317
+ PN V+W LLG C LH N+ L EE R + +LD + G YV +SN+YA G W+E S+
Sbjct: 340 IKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSK 399
Query: 318 IRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKL 365
+R ++ R + PG S I + +++EFV+G + + + + E+ E L
Sbjct: 400 MRDRVRKR---RMPGKSWIELGSIINEFVSGPDNNDEQLMMGEISEVL 444
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 83/159 (52%), Gaps = 16/159 (10%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ N ++ + G AR LF +++V ++TS+I+G A G +E+L++F +M+
Sbjct: 203 DLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMK 262
Query: 86 K-DGSK-----PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNA----LI 135
D S+ PN+VT + VL+AC+ G +E GK R K N+ A ++
Sbjct: 263 TIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGK---RHFKSMIMDYNLKPREAHFGCMV 319
Query: 136 DMYVKCGCLEEGYRVFEGM--RERTVVSWSSMIVGFAMH 172
D++ + G L++ + M + TV+ W +++ ++H
Sbjct: 320 DLFCRSGHLKDAHEFINQMPIKPNTVI-WRTLLGACSLH 357
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 127/364 (34%), Positives = 182/364 (50%), Gaps = 37/364 (10%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+HLY +C +T AR +FD+M + RNV SW
Sbjct: 154 LIHLYGTCKKTSDARKVFDEMTE-------------------------------RNVVSW 182
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
S++ L + G + F EM P+E T+V +L AC G+L GK VH
Sbjct: 183 NSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMV 240
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
N + AL+DMY K G LE VFE M ++ V +WS+MIVG A +
Sbjct: 241 RELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQL 300
Query: 182 XXXMIR-VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M++ ++PNYVTF+GVL ACSH GLVD G M + + I P + HYG +VD+L
Sbjct: 301 FSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDIL 360
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIV---LAEEAMRHLSKLDLLNDG 297
RAGRL EA + I M P+ VVW LL C +H + + E+ + L +L+ G
Sbjct: 361 GRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSG 420
Query: 298 YYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKG 357
V+++N +AEA W E + +RR+MK +KK G S + + G H F +G + +
Sbjct: 421 NLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVS 480
Query: 358 IFEM 361
I+E+
Sbjct: 481 IYEL 484
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 132/290 (45%), Gaps = 15/290 (5%)
Query: 9 CGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDL------FSSMPQRNVRSWT 62
C +H + ++ + + +I+ L+ V + A+DL +W
Sbjct: 23 CSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWN 82
Query: 63 SVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGN 122
+ G + E++ V+SEM++ G KPN++T +L ACA L G+ + +
Sbjct: 83 MLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKH 142
Query: 123 GFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXX 182
GF +VYV N LI +Y C + +VF+ M ER VVSW+S++ +
Sbjct: 143 GFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECF 202
Query: 183 XXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT-IMRRDYGIVPGVEHYGCLVDLLS 241
MI P+ T + +L AC G + G+ + + +M R+ + LVD+ +
Sbjct: 203 CEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELEL--NCRLGTALVDMYA 258
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL 291
++G LE AR V M V N W A++ G + AEEA++ SK+
Sbjct: 259 KSGGLEYARLVFERM-VDKNVWTWSAMIVGLAQYG---FAEEALQLFSKM 304
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 163/296 (55%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + AR ++ +P+ + S +S+I G ++ G+ ++ +F +M G + + ++L
Sbjct: 600 GSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSIL 659
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
A A + G VH + G V ++L+ MY K G +++ + F + ++
Sbjct: 660 KAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLI 719
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
+W+++I +A H M G KP+ VTF+GVL ACSH GLV++ L M
Sbjct: 720 AWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSM 779
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
+DYGI P HY C+VD L R+GRL EA I NM + P+ +VWG LL C++H + L
Sbjct: 780 VKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVEL 839
Query: 281 AEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSI 336
+ A + +L+ + G Y+ +SN+ AE G+W+EV R+LMK GV+K PG SS+
Sbjct: 840 GKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 139/314 (44%), Gaps = 43/314 (13%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + + LF +P ++ W S+I G + G EA+ +FSEM DG+ P+E T+ AVL
Sbjct: 499 GSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVL 558
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
C+ L GK +H + G + + + +AL++MY KCG L+ +V++ + E V
Sbjct: 559 TVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPV 618
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHAC---------------- 204
S SS+I G++ H M+ G + +L A
Sbjct: 619 SCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYI 678
Query: 205 SHVGLVDK---GRALLTIMRRDYGIV------------PGVEHYGCLVDLLSRAGRLEEA 249
+ +GL + G +LLT M +G + P + + L+ ++ G+ EA
Sbjct: 679 TKIGLCTEPSVGSSLLT-MYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEA 737
Query: 250 REVIANM---SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL--DL---LNDGYYVV 301
+V M P++V + +L C H +V EE+ HL+ + D + +YV
Sbjct: 738 LQVYNLMKEKGFKPDKVTFVGVLSACS-HGGLV--EESYFHLNSMVKDYGIEPENRHYVC 794
Query: 302 MSNVYAEAGKWEEV 315
M + +G+ E
Sbjct: 795 MVDALGRSGRLREA 808
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 94/177 (53%), Gaps = 4/177 (2%)
Query: 76 EALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALI 135
+A+++F+ M ++G + +E +V ++L + L L GK VH + +G + ++ V ++L
Sbjct: 436 KAIRLFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLF 492
Query: 136 DMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYV 195
+Y KCG LEE Y++F+G+ + W+SMI GF + M+ G P+
Sbjct: 493 TLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDES 552
Query: 196 TFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV 252
T VL CS + +G+ + R GI G++ LV++ S+ G L+ AR+V
Sbjct: 553 TLAAVLTVCSSHPSLPRGKEIHGYTLRA-GIDKGMDLGSALVNMYSKCGSLKLARQV 608
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 125/281 (44%), Gaps = 18/281 (6%)
Query: 13 RHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCG 72
R L FD + + +W N G + A LF ++PQ +V S +I G +
Sbjct: 76 RRYLLPFDVFLTKSLLSW------YSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHR 129
Query: 73 MCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCN 132
+ EE+L+ FS+M G + NE++ +V+ AC+ L F + V G+ V +
Sbjct: 130 LFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVES 189
Query: 133 ALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKP 192
ALID++ K E+ Y+VF V W+++I G + M KP
Sbjct: 190 ALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKP 249
Query: 193 NYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEH-YGC--LVDLLSRAGRLEEA 249
+ T+ VL AC+ + + G+ + + I G E + C +VDL ++ G + EA
Sbjct: 250 DSYTYSSVLAACASLEKLRFGKVVQARV-----IKCGAEDVFVCTAIVDLYAKCGHMAEA 304
Query: 250 REVIANMSVPPNRVVWGALLGGCRLHKNIVLAEE---AMRH 287
EV + + P+ V W +L G + A E MRH
Sbjct: 305 MEVFSRIP-NPSVVSWTVMLSGYTKSNDAFSALEIFKEMRH 344
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 16/267 (5%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G+ AR++ K D+ ++ G++ A ++FS +P +V SWT ++ G
Sbjct: 270 GKVVQARVI--KCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYT 327
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
K AL++F EM G + N TV +V+ AC + + VH + +GF +
Sbjct: 328 KSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSS 387
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGM---RERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI 186
V ALI MY K G ++ +VFE + + + +V + MI F+ M+
Sbjct: 388 VAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRML 445
Query: 187 RVGMKPNYVTFIGVLHA--CSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAG 244
+ G++ + + +L C ++G G L + G+V + L L S+ G
Sbjct: 446 QEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKS------GLVLDLTVGSSLFTLYSKCG 499
Query: 245 RLEEAREVIANMSVPPNRVVWGALLGG 271
LEE+ ++ + N W +++ G
Sbjct: 500 SLEESYKLFQGIPFKDN-ACWASMISG 525
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 173/293 (59%), Gaps = 1/293 (0%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
+ +A +F+S+ + ++ + +S+I G ++CG +EAL +F+E+ G KP+ V V VL +
Sbjct: 258 IASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGS 317
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
CA+L D GK VH + G ++ VC+ALIDMY KCG L+ +F G+ E+ +VS+
Sbjct: 318 CAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSF 377
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR 222
+S+I+G +H ++ +G+ P+ +TF +L C H GL++KG+ + M+
Sbjct: 378 NSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKS 437
Query: 223 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAE 282
++GI P EHY +V L+ AG+LEEA E + ++ P + + GALL C +H+N LAE
Sbjct: 438 EFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAE 497
Query: 283 EAMRHLSKL-DLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCS 334
++ K + Y V++SNVYA G+W+EV R+R + K PG S
Sbjct: 498 VVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 117/256 (45%), Gaps = 2/256 (0%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + A LF S+P ++ W +I G CG ++ + +F+ M+ G +PN T+VA+
Sbjct: 155 GLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALT 214
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
L SVH F + YV AL++MY +C C+ VF + E +V
Sbjct: 215 SGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLV 274
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
+ SS+I G++ + G KP+ V VL +C+ + G+ + + +
Sbjct: 275 ACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYV 334
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
R G+ ++ L+D+ S+ G L+ A + A + N V + +L+ G LH
Sbjct: 335 IR-LGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP-EKNIVSFNSLILGLGLHGFAST 392
Query: 281 AEEAMRHLSKLDLLND 296
A E + ++ L+ D
Sbjct: 393 AFEKFTEILEMGLIPD 408
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 105/239 (43%), Gaps = 13/239 (5%)
Query: 45 AARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACA 104
+AR LF P+R+V W S+I AK L +FS++ + ++P+ T + +
Sbjct: 58 SARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFS 117
Query: 105 QLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSS 164
+ D + + +H A +G + +A++ Y K G + E ++F + + + W+
Sbjct: 118 ESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNV 177
Query: 165 MIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDY 224
MI+G+ M G +PN T + + GL+D L+ +
Sbjct: 178 MILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTS-----GLIDPSLLLVAWSVHAF 232
Query: 225 GIVPGVEHY---GC-LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG---CRLHK 276
+ ++ + GC LV++ SR + A V ++S P+ V +L+ G C HK
Sbjct: 233 CLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSIS-EPDLVACSSLITGYSRCGNHK 290
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ DI + +I G + A LF+ +P++N+ S+ S+I GL G A + F+E
Sbjct: 340 ELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTE 399
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSV 115
+ + G P+E+T A+L C G L G+ +
Sbjct: 400 ILEMGLIPDEITFSALLCTCCHSGLLNKGQEI 431
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 119/364 (32%), Positives = 179/364 (49%), Gaps = 12/364 (3%)
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
C + L+ K+VH + ++ + L++MY CG E VFE M E+ + +W
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETW 323
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR 222
+I FA + G P+ F G+ +AC +G VD+G M R
Sbjct: 324 CIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSR 383
Query: 223 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAE 282
DYGI P +E Y LV++ + G L+EA E + M + PN VW L+ R+H N+ L +
Sbjct: 384 DYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGD 443
Query: 283 EAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVV 342
+ LD + +A E+ S +R GVK + +
Sbjct: 444 YCAEVVEFLDPTRLNKQSREGFIPVKASDVEKESLKKRSGILHGVKSS-----------M 492
Query: 343 HEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKL 402
EF AGD P+ +F++ L + M GY+ +T + L D+ D + KE L HSE++
Sbjct: 493 QEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDI-DQESKETLLLGHSERI 551
Query: 403 ALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTC 462
A ++N+ P ++KNLRVC DCH A K++S+I RE++ RD RFH K+GACTC
Sbjct: 552 AFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTC 611
Query: 463 KDYW 466
KDYW
Sbjct: 612 KDYW 615
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 9/174 (5%)
Query: 2 LLHLYASCGET---RHARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMP 54
LL L CGE + A+ + K+ D+++ ++++ N G A +F M
Sbjct: 257 LLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMS 316
Query: 55 QRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG-K 113
++N+ +W +I AK G E+A+ +FS +++G+ P+ + AC LGD++ G
Sbjct: 317 EKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLL 376
Query: 114 SVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMI 166
++ G ++ +L++MY G L+E E M E V W +++
Sbjct: 377 HFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLM 430
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/338 (33%), Positives = 183/338 (54%), Gaps = 12/338 (3%)
Query: 7 ASCGETR---HARLMFDKMPQRDIATWNIMIAHLINV----GYVGAARDLFSSMPQRNVR 59
+CG R + + K+ I + ++ + L+++ G V AR +F+ M ++N
Sbjct: 273 TACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSV 332
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
SW++++ G + G E+A+++F EME+ + VL ACA L + GK +H
Sbjct: 333 SWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQY 388
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
G NV V +ALID+Y K GC++ RV+ M R +++W++M+ A +
Sbjct: 389 VRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAV 448
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M++ G+KP+Y++FI +L AC H G+VD+GR +M + YGI PG EHY C++DL
Sbjct: 449 SFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDL 508
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIV-LAEEAMRHLSKLDLLNDGY 298
L RAG EEA ++ + +WG LLG C + + +AE + + +L+
Sbjct: 509 LGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMS 568
Query: 299 YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSI 336
YV++SN+Y G+ + IR+LM RGV KT G S I
Sbjct: 569 YVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWI 606
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 115/226 (50%), Gaps = 9/226 (3%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEK-DGSKPNEVTVVAVLVACA 104
AR +F MP+ +V WT+V+ +K + EEAL +F M + G P+ T VL AC
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276
Query: 105 QLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSS 164
L L+ GK +H NG NV V ++L+DMY KCG + E +VF GM ++ VSWS+
Sbjct: 277 NLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSA 336
Query: 165 MIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL-TIMRRD 223
++ G+ + + R + + F VL AC+ + V G+ + +RR
Sbjct: 337 LLGGYCQN----GEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRR- 391
Query: 224 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALL 269
G V L+DL ++G ++ A V + MS+ N + W A+L
Sbjct: 392 -GCFGNVIVESALIDLYGKSGCIDSASRVYSKMSI-RNMITWNAML 435
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 119/249 (47%), Gaps = 3/249 (1%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
R +F ++ SWTS++ G +AL+VF EM G NE T+ + + AC++
Sbjct: 116 TRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSE 175
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
LG++ G+ H +GF N ++ + L +Y + RVF+ M E V+ W+++
Sbjct: 176 LGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAV 235
Query: 166 IVGFAMHXXXXXXXXXXXXMIR-VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDY 224
+ F+ + M R G+ P+ TF VL AC ++ + +G+ + + +
Sbjct: 236 LSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITN- 294
Query: 225 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEA 284
GI V L+D+ + G + EAR+V MS N V W ALLGG + A E
Sbjct: 295 GIGSNVVVESSLLDMYGKCGSVREARQVFNGMS-KKNSVSWSALLGGYCQNGEHEKAIEI 353
Query: 285 MRHLSKLDL 293
R + + DL
Sbjct: 354 FREMEEKDL 362
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 95/240 (39%), Gaps = 19/240 (7%)
Query: 51 SSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLE 110
SS P + R I L K G EA+++ + ++L C ++
Sbjct: 24 SSAPTKQSR-----ILELCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFI 78
Query: 111 FGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG-CLEEGYRVFEGMRERTVVSWSSMIVGF 169
G H +G + V N+L+ +Y K G + E RVF+G + +SW+SM+ G+
Sbjct: 79 HGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGY 138
Query: 170 AMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPG 229
M+ G+ N T + ACS +G V GR ++ I G
Sbjct: 139 VTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVV-----ITHG 193
Query: 230 VE--HY--GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
E H+ L L +AR V M P+ + W A+L KN L EEA+
Sbjct: 194 FEWNHFISSTLAYLYGVNREPVDARRVFDEMP-EPDVICWTAVLSA--FSKND-LYEEAL 249
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 106/316 (33%), Positives = 160/316 (50%)
Query: 50 FSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDL 109
F+S ++++ SWTS+I + E A +F ++ +P E TV ++ ACA L
Sbjct: 416 FASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAAL 475
Query: 110 EFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGF 169
G+ + +A +G V + I MY K G + +VF ++ V ++S+MI
Sbjct: 476 SSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSL 535
Query: 170 AMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPG 229
A H M G+KPN F+GVL AC H GLV +G M+ DY I P
Sbjct: 536 AQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPN 595
Query: 230 VEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLS 289
+H+ CLVDLL R GRL +A +I + + V W ALL CR++K+ V+ + L
Sbjct: 596 EKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLM 655
Query: 290 KLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGD 349
+L+ G YV++ N+Y ++G +R LM+ RGVKK P S I I H F D
Sbjct: 656 ELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVAD 715
Query: 350 ETHPQAKGIFEMWEKL 365
+HP ++ I+ M E +
Sbjct: 716 LSHPSSQMIYTMLETM 731
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 117/232 (50%), Gaps = 5/232 (2%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
+G AR LF MP+RN+ S+ S+I G + G E+A+++F E + K ++ T L
Sbjct: 98 LGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGF 157
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
C + DL+ G+ +H NG + V++ N LIDMY KCG L++ +F+ ER VSW
Sbjct: 158 CGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSW 217
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS---HVGLVDKGRALLTI 219
+S+I G+ M R G+ VL AC + G ++KG A+
Sbjct: 218 NSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCY 277
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ G+ + L+D+ ++ G L+EA ++ + M N V + A++ G
Sbjct: 278 TAK-LGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNAMISG 327
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 12/257 (4%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
GE H ++ + + Q+ + N++I G + A LF +R+ SW S+I G
Sbjct: 167 GELLHGLVVVNGLSQQ-VFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYV 225
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACA---QLGDLEFGKSVHRFAKGNGFLR 126
+ G EE L + ++M +DG + +VL AC G +E G ++H + G
Sbjct: 226 RVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEF 285
Query: 127 NVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAM-----HXXXXXXXXX 181
++ V AL+DMY K G L+E ++F M + VV++++MI GF
Sbjct: 286 DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKL 345
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYG-CLVDLL 240
M R G++P+ TF VL ACS ++ GR + ++ ++ E G L++L
Sbjct: 346 FMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNN--FQSDEFIGSALIELY 403
Query: 241 SRAGRLEEAREVIANMS 257
+ G E+ + A+ S
Sbjct: 404 ALMGSTEDGMQCFASTS 420
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 120/270 (44%), Gaps = 18/270 (6%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCG-----MCEEALKV 80
DI ++ G + A LFS MP +NV ++ ++I G + EA K+
Sbjct: 286 DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKL 345
Query: 81 FSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVK 140
F +M++ G +P+ T VL AC+ LE+G+ +H N F + ++ +ALI++Y
Sbjct: 346 FMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYAL 405
Query: 141 CGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGV 200
G E+G + F ++ + SW+SMI + + ++P T +
Sbjct: 406 MGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLM 465
Query: 201 LHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCL----VDLLSRAGRLEEAREVIANM 256
+ AC+ + G + + Y I G++ + + + + +++G + A +V +
Sbjct: 466 MSACADFAALSSGEQI-----QGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEV 520
Query: 257 SVPPNRVVWGALLGGCRLHKNIVLAEEAMR 286
P+ + A++ H + A EA+
Sbjct: 521 Q-NPDVATYSAMISSLAQHGS---ANEALN 546
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 117/286 (40%), Gaps = 58/286 (20%)
Query: 137 MYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVT 196
MY KC L ++F+ M ER ++S++S+I G+ +K + T
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 197 FIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM 256
+ G L C +D G L ++ + G+ V L+D+ S+ G+L++A + +
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVN-GLSQQVFLINVLIDMYSKCGKLDQAMSLF-DR 208
Query: 257 SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSK-----LDL---------------LND 296
++V W +L+ G + + AEE + L+K L+L LN+
Sbjct: 209 CDERDQVSWNSLISG---YVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNE 265
Query: 297 GYY----------------------VVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCS 334
G+ + ++YA+ G +E ++ LM S+ V
Sbjct: 266 GFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNV------- 318
Query: 335 SITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSV 380
+T + ++ F+ DE +A E + KL + M+ +G P S
Sbjct: 319 -VTYNAMISGFLQMDEITDEASS--EAF-KLFMDMQRRGLEPSPST 360
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/341 (33%), Positives = 182/341 (53%), Gaps = 16/341 (4%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A+ F + R + SW ++I G A+ G EALK+F + + PNE T +VL A A
Sbjct: 426 AKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAE-TMPNEYTFGSVLNAIAF 484
Query: 106 LGDLEF--GKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWS 163
D+ G+ H G V +AL+DMY K G ++E +VF M ++ W+
Sbjct: 485 AEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWT 544
Query: 164 SMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRD 223
S+I ++ H MI+ + P+ VTF+ VL AC+ G+VDKG + +M
Sbjct: 545 SIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEV 604
Query: 224 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL--- 280
Y + P EHY C+VD+L RAGRL+EA E+++ + P + ++LG CRLH N+ +
Sbjct: 605 YNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAK 664
Query: 281 -AEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITID 339
AE AM +L G YV M N+YAE +W++ + IR+ M+ + V K G S I +
Sbjct: 665 VAELAMEMKPEL----SGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVG 720
Query: 340 G-----VVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYI 375
+ F +GD++HP++ I+ M E + ++M ++G +
Sbjct: 721 DTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLEGKV 761
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 117/251 (46%), Gaps = 12/251 (4%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
NI+++ G + A + +F M +RNV SWT++I ++A+ +F M DG
Sbjct: 315 NILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVY 369
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
PNEVT V ++ A ++ G +H GF+ V N+ I +Y K LE+ +
Sbjct: 370 PNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKA 429
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS---HV 207
FE + R ++SW++MI GFA + M PN TF VL+A + +
Sbjct: 430 FEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDI 488
Query: 208 GLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGA 267
+ R +++ P V L+D+ ++ G ++E+ +V MS N+ VW +
Sbjct: 489 SVKQGQRCHAHLLKLGLNSCPVVS--SALLDMYAKRGNIDESEKVFNEMS-QKNQFVWTS 545
Query: 268 LLGGCRLHKNI 278
++ H +
Sbjct: 546 IISAYSSHGDF 556
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 115/249 (46%), Gaps = 8/249 (3%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCE-EALKVFS 82
+ D+ N I G AR +F M +++ SW S++ GL++ G EA+ +F
Sbjct: 206 ESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFR 265
Query: 83 EMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG 142
+M ++G + + V+ +V+ C DL+ + +H G+ + V N L+ Y KCG
Sbjct: 266 DMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCG 325
Query: 143 CLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLH 202
LE VF M ER VVSW++MI M G+ PN VTF+G+++
Sbjct: 326 VLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLIN 380
Query: 203 ACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR 262
A + +G + + + G V + L ++ LE+A++ +++
Sbjct: 381 AVKCNEQIKEGLKIHGLCIKT-GFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFRE-I 438
Query: 263 VVWGALLGG 271
+ W A++ G
Sbjct: 439 ISWNAMISG 447
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 112/262 (42%), Gaps = 28/262 (10%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKC---GMCEEALKVFSE---MEKDGSKPNEVTVVAV 99
A LF QRN TS+ + +++ AL +F E + G +EVT+
Sbjct: 27 AHKLFDGSSQRNAT--TSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLA 84
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
L AC GDL+ G +H F+ +GF V V NA++ MY K G + +FE + + V
Sbjct: 85 LKACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDV 142
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
VSW++++ GF + V MK V F ++ + V LL +
Sbjct: 143 VSWNTILSGFDDNQIALNFV--------VRMKSAGVVFDAFTYSTALSFCVGSEGFLLGL 194
Query: 220 MRRDYGIVPGVEHY----GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
+ + G+E + + SR+G AR V MS + + W +LL G
Sbjct: 195 QLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSF-KDMISWNSLLSGLSQE 253
Query: 276 -----KNIVLAEEAMRHLSKLD 292
+ +V+ + MR +LD
Sbjct: 254 GTFGFEAVVIFRDMMREGVELD 275
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 97/261 (37%), Positives = 150/261 (57%), Gaps = 1/261 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ LY CG+ R +FDKMP R I +W M+ L++ + +A +F+ MP RNV SW
Sbjct: 160 LMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSW 219
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
T++I K +EA ++F M+ D KPNE T+V +L A QLG L G+ VH +A
Sbjct: 220 TAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHK 279
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHX-XXXXXXX 180
NGF+ + ++ ALIDMY KCG L++ +VF+ M+ +++ +W+SMI +H
Sbjct: 280 NGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSL 339
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
++P+ +TF+GVL AC++ G V G T M + YGI P EH C++ LL
Sbjct: 340 FEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLL 399
Query: 241 SRAGRLEEAREVIANMSVPPN 261
+A +E+A ++ +M P+
Sbjct: 400 EQALEVEKASNLVESMDSDPD 420
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 126/306 (41%), Gaps = 65/306 (21%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ + +S GET++A L+F+++ TWN+MI R L + R
Sbjct: 58 LISVSSSFGETQYASLVFNQLQSPSTFTWNLMI------------RSLSVNHKPR----- 100
Query: 62 TSVIYGLAKCGMCEEALKVFSEME-KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
EAL +F M S+ ++ T V+ AC + G VH A
Sbjct: 101 --------------EALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAI 146
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
GF +V+ N L+D+Y KCG + G +VF+ M R++VSW++M+ G +
Sbjct: 147 KAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEI 206
Query: 181 XXXXM------------------------------IRV-GMKPNYVTFIGVLHACSHVGL 209
M ++V +KPN T + +L A + +G
Sbjct: 207 VFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGS 266
Query: 210 VDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALL 269
+ GR + ++ G V L+D+ S+ G L++AR+V M + W +++
Sbjct: 267 LSMGRWVHDYAHKN-GFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQ-GKSLATWNSMI 324
Query: 270 GGCRLH 275
+H
Sbjct: 325 TSLGVH 330
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 186/340 (54%), Gaps = 8/340 (2%)
Query: 2 LLHLYASCGETRHARLMFDKMPQ-RDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVR- 59
L+ +Y+ C + A ++F ++ R++ +WN +I+ ++ G A +LF + ++
Sbjct: 272 LIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKP 331
Query: 60 ---SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH 116
+W S+I G ++ G EA K F M P+ + ++L AC+ + L+ GK +H
Sbjct: 332 DSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIH 391
Query: 117 RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM--RERTVVSWSSMIVGFAMHXX 174
R+++V +LIDMY+KCG R+F+ + + V W+ MI G+ H
Sbjct: 392 GHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGE 451
Query: 175 XXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYG 234
+ ++P+ TF VL ACSH G V+KG + +M+ +YG P EH G
Sbjct: 452 CESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIG 511
Query: 235 CLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLL 294
C++DLL R+GRL EA+EVI MS P + V +LLG CR H + VL EEA L++L+
Sbjct: 512 CMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPE 570
Query: 295 NDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCS 334
N +V++S++YA +WE+V IR+++ + + K PG S
Sbjct: 571 NPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 139/297 (46%), Gaps = 14/297 (4%)
Query: 2 LLHLYASCGETRHARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMPQRN 57
LL A G+ R++ ++ + D+ T +++ + V V A + MP+R
Sbjct: 37 LLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERG 96
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
+ S + + GL + G C +A ++F + GS N VTV +VL C GD+E G +H
Sbjct: 97 IASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGGMQLHC 153
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
A +GF VYV +L+ MY +CG R+FE + ++VV++++ I G +
Sbjct: 154 LAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNL 213
Query: 178 XXXXXXXMIRVGM-KPNYVTFIGVLHACSHVGLVDKGRALL-TIMRRDYGIVPGVEHYGC 235
M + +PN VTF+ + AC+ + + GR L +M++++ V
Sbjct: 214 VPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGT--A 271
Query: 236 LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLD 292
L+D+ S+ + A V + N + W +++ G ++ E A+ KLD
Sbjct: 272 LIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQ---HETAVELFEKLD 325
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 103/202 (50%), Gaps = 7/202 (3%)
Query: 42 YVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK-PNEVTVVAVL 100
+V AAR +F +P ++V ++ + I GL + G+ VF+ M K S+ PN+VT V +
Sbjct: 180 WVLAAR-MFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAI 238
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRE-RTV 159
ACA L +L++G+ +H F V ALIDMY KC C + Y VF +++ R +
Sbjct: 239 TACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNL 298
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
+SW+S+I G ++ + G+KP+ T+ ++ S +G V +
Sbjct: 299 ISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFER 358
Query: 220 MRRDYGIVPGVEHYGCLVDLLS 241
M +VP ++ CL LLS
Sbjct: 359 M-LSVVMVPSLK---CLTSLLS 376
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
PN+ T +L +CA+LGD+ G+ +H GF +V+ AL+ MY+K + + +V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 151 FEGMRERTVVSWSSMIVGF 169
+ M ER + S ++ + G
Sbjct: 89 LDEMPERGIASVNAAVSGL 107
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 170/306 (55%), Gaps = 2/306 (0%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G V +R LF + R+V W+S+I G A+ G C E + + ++M K+G + N VT++A++
Sbjct: 301 GNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIV 360
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
AC L F +VH GF+ ++ + NALIDMY KCG L VF + E+ +V
Sbjct: 361 SACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLV 420
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
SWSSMI + +H MI+ G + + + F+ +L AC+H GLV++ + + T
Sbjct: 421 SWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQA 480
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
+ Y + +EHY C ++LL R G++++A EV NM + P+ +W +LL C H + +
Sbjct: 481 GK-YHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDV 539
Query: 281 AEEAM-RHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITID 339
A + + L K + N YV++S ++ E+G + +RR+M+ R + K G S I +
Sbjct: 540 AGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPE 599
Query: 340 GVVHEF 345
+ ++
Sbjct: 600 LQIEDY 605
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 125/263 (47%), Gaps = 3/263 (1%)
Query: 14 HARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGM 73
HA ++ D+ Q + ++ + AA +F M +N SWT++I G
Sbjct: 172 HALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQN 231
Query: 74 CEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLG-DLEFGKSVHRFAKGNGFLRNVYVCN 132
E + +F M+++ +PN VT+++VL AC +L K +H F+ +G + +
Sbjct: 232 YEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTA 291
Query: 133 ALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKP 192
A + MY +CG + +FE + R VV WSSMI G+A M + G++
Sbjct: 292 AFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEA 351
Query: 193 NYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV 252
N VT + ++ AC++ L+ + + + + G + + L+D+ ++ G L AREV
Sbjct: 352 NSVTLLAIVSACTNSTLLSFASTVHSQILK-CGFMSHILLGNALIDMYAKCGSLSAAREV 410
Query: 253 IANMSVPPNRVVWGALLGGCRLH 275
++ + V W +++ LH
Sbjct: 411 FYELT-EKDLVSWSSMINAYGLH 432
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 2/181 (1%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D N +I+ A R +F M R+ S+ S+I + G+ EA+K+ EM
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 86 KDGSKPNEVTVVAVLVACAQLG-DLEFGKSVHRFAKGNGFLR-NVYVCNALIDMYVKCGC 143
G P V ++L C ++G + + H + ++ +V + AL+DMY+K
Sbjct: 141 FYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDD 200
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
+ VF+ M + VSW++MI G + M R ++PN VT + VL A
Sbjct: 201 HAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPA 260
Query: 204 C 204
C
Sbjct: 261 C 261
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 191 bits (485), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 112/341 (32%), Positives = 172/341 (50%), Gaps = 5/341 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
+ Y G+ +R MFD + + N ++ G + A + F MP +V SW
Sbjct: 127 FVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSW 186
Query: 62 TSVIYGLAKCGMCEEALKVFSEM---EKDGSKPNEVTVVAVLVACAQL--GDLEFGKSVH 116
T+VI G +K G+ +AL VF EM E+ PNE T V+VL +CA G + GK +H
Sbjct: 187 TTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIH 246
Query: 117 RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXX 176
+ + + AL+DMY K G LE +F+ +R++ V +W+++I A +
Sbjct: 247 GYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPK 306
Query: 177 XXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCL 236
M + PN +T + +L AC+ LVD G L + + +Y I+P EHYGC+
Sbjct: 307 QALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCV 366
Query: 237 VDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLND 296
VDL+ RAG L +A I ++ P+ V GALLG C++H+N L + L L +
Sbjct: 367 VDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHC 426
Query: 297 GYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSIT 337
G YV +S A W E ++R+ M G++K P S +T
Sbjct: 427 GQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVLT 467
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 185/362 (51%), Gaps = 2/362 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++ +Y CG ++A ++ + + MI + G + A+ LF S+ ++N+ W
Sbjct: 301 IVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVW 360
Query: 62 TSVIYGLAKCGMCEEALKVF-SEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
T++ G + L++ + + + + P+ + +V+VL AC+ +E GK +H +
Sbjct: 361 TAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSL 420
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
G L + + A +DMY KCG +E R+F+ ER V +++MI G A H
Sbjct: 421 RTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQ 480
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M G KP+ +TF+ +L AC H GLV +G M Y I P HY C++DL
Sbjct: 481 HFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLY 540
Query: 241 SRAGRLEEAREVIANM-SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY 299
+A RL++A E++ + V + V+ GA L C +KN L +E L ++ N Y
Sbjct: 541 GKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRY 600
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIF 359
+ ++N YA +G+W+E+ RIR M+ + ++ GCS ID H F + D +H + + I+
Sbjct: 601 IQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIY 660
Query: 360 EM 361
M
Sbjct: 661 AM 662
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 139/309 (44%), Gaps = 37/309 (11%)
Query: 2 LLHLYASCGETRHARLMFDK--MPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRN-V 58
L+H+Y+ CG+ + +F+ + D N MIA G + A +F P+ N
Sbjct: 166 LIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDT 225
Query: 59 RSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRF 118
SW ++I G A+ G EEALK+ ME++G K +E + AVL + L L+ GK VH
Sbjct: 226 ISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHAR 285
Query: 119 AKGNGFLRNVYVCNALIDMYVKCGCLE-------------------------------EG 147
NG N +V + ++D+Y KCG ++ E
Sbjct: 286 VLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEA 345
Query: 148 YRVFEGMRERTVVSWSSMIVGF-AMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSH 206
R+F+ + E+ +V W++M +G+ + + P+ + + VL ACS
Sbjct: 346 KRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSL 405
Query: 207 VGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWG 266
++ G+ + R GI+ + VD+ S+ G +E A E I + S + V++
Sbjct: 406 QAYMEPGKEIHGHSLRT-GILMDKKLVTAFVDMYSKCGNVEYA-ERIFDSSFERDTVMYN 463
Query: 267 ALLGGCRLH 275
A++ GC H
Sbjct: 464 AMIAGCAHH 472
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 118/252 (46%), Gaps = 39/252 (15%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMP-QRNVRS 60
L++LY+ G R AR +FD+M +R++ +WN +IA + V AR+LF S +R++ +
Sbjct: 29 LVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLIT 88
Query: 61 WTSVIYGLAKCGMCE-EALKVFSEM---EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH 116
+ +++ G AK CE EA+++F EM EKD ++ TV ++ A+L ++ +G+ +H
Sbjct: 89 YNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLH 148
Query: 117 RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM------------------RE-- 156
G + ++LI MY KCG +E +F G RE
Sbjct: 149 GVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGD 208
Query: 157 --------------RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLH 202
+SW+++I G+A + M G+K + +F VL+
Sbjct: 209 IDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLN 268
Query: 203 ACSHVGLVDKGR 214
S + + G+
Sbjct: 269 VLSSLKSLKIGK 280
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 158/323 (48%), Gaps = 4/323 (1%)
Query: 17 LMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEE 76
L + + D N +I + +A +F + N+ SW VI L++ E
Sbjct: 606 LAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGRE 665
Query: 77 ALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALID 136
++F ++ + PNE+T V +L A QLG +G H GF N +V AL+D
Sbjct: 666 VFQLFRNLKLE---PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVD 722
Query: 137 MYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG-MKPNYV 195
MY CG LE G +VF ++ +W+S+I H + M+PN
Sbjct: 723 MYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKS 782
Query: 196 TFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 255
+FI +L ACSH G +D+G + M +G+ P EH +VD+L RAG+L EA E I
Sbjct: 783 SFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITG 842
Query: 256 MSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEV 315
+ P VWGALL C H + L +E L +++ N YY+ ++N Y G WEE
Sbjct: 843 IGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEA 902
Query: 316 SRIRRLMKSRGVKKTPGCSSITI 338
R+R++++ +KK PG S I +
Sbjct: 903 VRLRKMVEDNALKKLPGYSVIDV 925
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 174/440 (39%), Gaps = 79/440 (17%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAAR-------------- 47
++ +Y CG T A L+F RD+ +WN MI+ G+ A+
Sbjct: 435 VIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSK 494
Query: 48 ---------------------------------DLFSSM-------PQRNVRSWTSVIYG 67
DL S+ R++ SW SVI G
Sbjct: 495 FSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISG 554
Query: 68 LAKCGMCEEALKVFSEMEKDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLR 126
A G E+L+ F M ++G + + +T++ + A LG + G+ H A +
Sbjct: 555 CASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLREL 614
Query: 127 NVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI 186
+ + N LI MY +C +E +VF + + + SW+ +I + + +
Sbjct: 615 DTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL- 673
Query: 187 RVGMKPNYVTFIGVLHACSHVGLVDKG-RALLTIMRRDYGIVPGVEHYGCLVDLLSRAGR 245
++PN +TF+G+L A + +G G +A ++RR + P V LVD+ S G
Sbjct: 674 --KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVS--AALVDMYSSCGM 729
Query: 246 LEEAREVIANMSVPPNRV-VWGALLGGCRLHKNIVLAEEAMRHLSKLDLL--NDGYYVVM 302
LE +V N V N + W +++ H A E + LS + N ++ +
Sbjct: 730 LETGMKVFRNSGV--NSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISL 787
Query: 303 SNVYAEAGKWEE-VSRIRRLMKSRGVKKTPGCSSITIDGV--------VHEFVAGDETHP 353
+ + +G +E +S +++ + GVK +D + +EF+ G P
Sbjct: 788 LSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGI-GEP 846
Query: 354 QAKGIFEMWEKLLVKMKMKG 373
Q G+ W LL G
Sbjct: 847 QKAGV---WGALLSACNYHG 863
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 108/232 (46%), Gaps = 4/232 (1%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
+ +A +F+ M R++ SW +++ G ++L+ F M G + + VT V+ A
Sbjct: 239 LSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISA 298
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVC--NALIDMYVKCGCLEEGYRVFEGMRERTVV 160
C+ + +L G+S+H +G+ +V N++I MY KCG E VFE + R V+
Sbjct: 299 CSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVI 358
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVG-MKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
S ++++ GFA + M V ++P+ T + + C + +GRA+
Sbjct: 359 SSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGY 418
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
R +E ++D+ + G +A E++ + + V W +++
Sbjct: 419 TVRMEMQSRALEVINSVIDMYGKCGLTTQA-ELLFKTTTHRDLVSWNSMISA 469
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 117/257 (45%), Gaps = 30/257 (11%)
Query: 23 PQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFS 82
P+ ++ N +I+ G AA +F + R+V S +++ G A GM EEA + +
Sbjct: 322 PEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILN 381
Query: 83 EMEK-DGSKPNEVTVVAVLVACAQLGDLEF---GKSVHRFA-KGNGFLRNVYVCNALIDM 137
+M+ D +P+ TVV++ C GDL F G++VH + + R + V N++IDM
Sbjct: 382 QMQSVDKIQPDIATVVSITSIC---GDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDM 438
Query: 138 YVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR--VGMKPNYV 195
Y KCG + +F+ R +VSW+SMI F+ + ++ K +
Sbjct: 439 YGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLS 498
Query: 196 TFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 255
T + +L +C + G+++ +++ L DL S RLE
Sbjct: 499 TVLAILTSCDSSDSLIFGKSVHCWLQK-------------LGDLTSAFLRLE-------T 538
Query: 256 MSVPPNRVVWGALLGGC 272
MS + W +++ GC
Sbjct: 539 MSETRDLTSWNSVISGC 555
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 138/346 (39%), Gaps = 54/346 (15%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G H + +M R + N +I G A LF + R++ SW S+I +
Sbjct: 412 GRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFS 471
Query: 70 KCGMCEEALKVFSEM--EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRN 127
+ G +A +F E+ E SK + TV+A+L +C L FGKSVH + +
Sbjct: 472 QNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQ------- 524
Query: 128 VYVCNALIDMYVKCGCLEEGYRVFEGMRE-RTVVSWSSMIVGFAMHXXXXXXXXXXXXMI 186
K G L + E M E R + SW+S+I G A M
Sbjct: 525 ------------KLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMS 572
Query: 187 RVG-MKPNYVTFIGVLHACSHVGLVDKGR-------------------ALLTIMRR---- 222
R G ++ + +T +G + A ++GLV +GR L+T+ R
Sbjct: 573 REGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDI 632
Query: 223 -----DYGIV--PGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
+G++ P + + C++ LS+ E ++ N+ + PN + + LL
Sbjct: 633 ESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVGLLSASTQL 692
Query: 276 KNIVLAEEAMRHLSKLDLLNDGYY-VVMSNVYAEAGKWEEVSRIRR 320
+ +A HL + + + + ++Y+ G E ++ R
Sbjct: 693 GSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFR 738
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 111/248 (44%), Gaps = 2/248 (0%)
Query: 25 RDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM 84
+D+AT + ++ G + ++ LF + +++V W S+I L + G A+ +F EM
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179
Query: 85 EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCL 144
G++ + T++ A + L +H A G + + +CNAL+++Y K L
Sbjct: 180 IHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENL 239
Query: 145 EEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHAC 204
VF M R +VSW++++ + M G + + VTF V+ AC
Sbjct: 240 SSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISAC 299
Query: 205 SHVGLVDKGRALL-TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRV 263
S + + G +L +++ Y V ++ + S+ G E A V + V + +
Sbjct: 300 SSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEEL-VCRDVI 358
Query: 264 VWGALLGG 271
A+L G
Sbjct: 359 SSNAILNG 366
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 190/384 (49%), Gaps = 30/384 (7%)
Query: 83 EMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG 142
E+ G+ P+ V + +CA L LE K VH + F + + N +I M+ +C
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 143 CLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLH 202
+ + RVF+ M ++ + SW M+ ++ + M + G+KPN TF+ V
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 203 ACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR 262
AC+ VG +++ M+ ++GI P EHY ++ +L + G L EA + I ++ P
Sbjct: 346 ACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTA 405
Query: 263 VVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLM 322
W A+ RLH +I L + ++ +L + D V++ + K
Sbjct: 406 DFWEAMRNYARLHGDIDLED----YMEELMVDVDPSKAVINKIPTPPPK----------- 450
Query: 323 KSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVL 382
K+T + +T + EF + ++ K + K Y+PDT VL
Sbjct: 451 ---SFKET---NMVTSKSRILEF--------RNLTFYKDEAKEMAAKKGVVYVPDTRFVL 496
Query: 383 LDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENR 442
D++ +++ LY HSE+LA+ YG+I T P ++ I+KNLRVC DCH K++S+I R
Sbjct: 497 HDIDQEAKEQALLY-HSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGR 555
Query: 443 EIVVRDRNRFHCFKDGACTCKDYW 466
++VRD RFH FKDG C+C DYW
Sbjct: 556 VLIVRDNKRFHHFKDGKCSCGDYW 579
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 5 LYASCGETR---HARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMPQRN 57
L+ SC + H++ + D Q D N++I+ + A+ +F M ++
Sbjct: 242 LFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKD 301
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLE 110
+ SW ++ + GM ++AL +F EM K G KPNE T + V +ACA +G +E
Sbjct: 302 MDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIE 354
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 193/395 (48%), Gaps = 17/395 (4%)
Query: 72 GMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVC 131
G ++A+++ +G + + + C L+ K VH F + + ++
Sbjct: 160 GKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAY 219
Query: 132 NALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMK 191
N++I+MY CG +E+ VF M ER + +W +I FA + + G K
Sbjct: 220 NSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNK 279
Query: 192 PNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEARE 251
P+ F + AC +G +++G M ++YGI+P +EHY LV +L+ G L+EA
Sbjct: 280 PDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALR 339
Query: 252 VIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGK 311
+ +M PN +W L+ R+H +++L + + +LD N ++AG
Sbjct: 340 FVESME--PNVDLWETLMNLSRVHGDLILGDRCQDMVEQLD-------ASRLNKESKAGL 390
Query: 312 WEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKM 371
S K + + K P + AGD + P+ + ++ + L M
Sbjct: 391 VPVKSSDLVKEKLQRMAKGPNYG-------IRYMAAGDISRPENRELYMALKSLKEHMIE 443
Query: 372 KGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHA 431
GY+P + + L D+ D + K+ L+ H+E+ A + ++T IR+MKNLRVC DCH
Sbjct: 444 IGYVPLSKLALHDV-DQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHN 502
Query: 432 AFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
A KL+S+I RE++ RD RFH KDG C+C++YW
Sbjct: 503 ALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 2/142 (1%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
DI+ +N +I G V A +F+SMP+RN+ +W VI AK G E+A+ FS +
Sbjct: 215 DISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFK 274
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFG-KSVHRFAKGNGFLRNVYVCNALIDMYVKCGCL 144
++G+KP+ + AC LGD+ G K G + + +L+ M + G L
Sbjct: 275 QEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYL 334
Query: 145 EEGYRVFEGMRERTVVSWSSMI 166
+E R E M E V W +++
Sbjct: 335 DEALRFVESM-EPNVDLWETLM 355
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 171/330 (51%), Gaps = 3/330 (0%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D N +I G++ + +F M +R++ SW ++I G A+ +AL +F EM+
Sbjct: 380 DTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMK 439
Query: 86 -KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCN-ALIDMYVKCGC 143
K + + TVV++L AC+ G L GK +H F+R + + AL+DMY KCG
Sbjct: 440 FKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVI-RSFIRPCSLVDTALVDMYSKCGY 498
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
LE R F+ + + VVSW +I G+ H + GM+PN+V F+ VL +
Sbjct: 499 LEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSS 558
Query: 204 CSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRV 263
CSH G+V +G + + M RD+G+ P EH C+VDLL RA R+E+A + P+
Sbjct: 559 CSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSID 618
Query: 264 VWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMK 323
V G +L CR + + + + +L + G+YV + + +A +W++VS M+
Sbjct: 619 VLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMR 678
Query: 324 SRGVKKTPGCSSITIDGVVHEFVAGDETHP 353
S G+KK PG S I ++G F +H
Sbjct: 679 SLGLKKLPGWSKIEMNGKTTTFFMNHTSHS 708
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 130/251 (51%), Gaps = 3/251 (1%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ +I + G A+ + ++P ++V WT +I GL + G E+AL VFSEM
Sbjct: 279 DMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEML 338
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
+ GS + + +V+ +CAQLG + G SVH + +G+ + N+LI MY KCG L+
Sbjct: 339 QSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLD 398
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM-IRVGMKPNYVTFIGVLHAC 204
+ +FE M ER +VSW+++I G+A + M + + + T + +L AC
Sbjct: 399 KSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQAC 458
Query: 205 SHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV 264
S G + G+ + I+ R + I P LVD+ S+ G LE A+ ++S + V
Sbjct: 459 SSAGALPVGKLIHCIVIRSF-IRPCSLVDTALVDMYSKCGYLEAAQRCFDSISW-KDVVS 516
Query: 265 WGALLGGCRLH 275
WG L+ G H
Sbjct: 517 WGILIAGYGFH 527
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 125/262 (47%), Gaps = 6/262 (2%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
DIA N M+ +VG A+DLF M QR++ SW ++I G A G E LK+ M
Sbjct: 178 DIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMR 237
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
DG +P++ T A L + DLE G+ +H GF ++++ ALI MY+KCG E
Sbjct: 238 GDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEE 297
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
YRV E + + VV W+ MI G M++ G + V+ +C+
Sbjct: 298 ASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCA 357
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
+G D G ++ + R +G L+ + ++ G L+++ + M+ + V W
Sbjct: 358 QLGSFDLGASVHGYVLR-HGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSW 415
Query: 266 GALLGG----CRLHKNIVLAEE 283
A++ G L K ++L EE
Sbjct: 416 NAIISGYAQNVDLCKALLLFEE 437
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 126/258 (48%), Gaps = 15/258 (5%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + AR +F M +R+V WT++I ++ G+ EA + +EM G KP VT++ +L
Sbjct: 95 GLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEML 154
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
++ L+ +H FA GF ++ V N+++++Y KC + + +F+ M +R +V
Sbjct: 155 SGVLEITQLQ---CLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMV 211
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL-LTI 219
SW++MI G+A M G++P+ TF L + ++ GR L I
Sbjct: 212 SWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQI 271
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR--VVWGALLGGC----R 273
++ + + + L+ + + G+ E + V+ + PN+ V W ++ G R
Sbjct: 272 VKTGFDV--DMHLKTALITMYLKCGKEEASYRVLETI---PNKDVVCWTVMISGLMRLGR 326
Query: 274 LHKNIVLAEEAMRHLSKL 291
K +++ E ++ S L
Sbjct: 327 AEKALIVFSEMLQSGSDL 344
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 5/216 (2%)
Query: 56 RNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSV 115
+ + + S I L+ G ++ L FS M + P+ T ++L ACA L L FG S+
Sbjct: 9 NSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSI 68
Query: 116 HRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXX 175
H+ NGF + Y+ ++L+++Y K G L +VFE MRER VV W++MI ++
Sbjct: 69 HQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIV 128
Query: 176 XXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGC 235
M G+KP VT + +L + + I YG +
Sbjct: 129 GEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVI----YGFDCDIAVMNS 184
Query: 236 LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+++L + + +A+++ M + V W ++ G
Sbjct: 185 MLNLYCKCDHVGDAKDLFDQME-QRDMVSWNTMISG 219
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 153/282 (54%), Gaps = 1/282 (0%)
Query: 57 NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK-PNEVTVVAVLVACAQLGDLEFGKSV 115
++ W S+I G + +AL +F M + PNE + VL +C++L L G+
Sbjct: 482 DIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQF 541
Query: 116 HRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXX 175
H +G++ + +V AL DMY KCG ++ + F+ + + V W+ MI G+ +
Sbjct: 542 HGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRG 601
Query: 176 XXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGC 235
MI G KP+ +TF+ VL ACSH GLV+ G +L+ M+R +GI P ++HY C
Sbjct: 602 DEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYIC 661
Query: 236 LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLN 295
+VD L RAGRLE+A ++ + V+W LL CR+H ++ LA L +LD +
Sbjct: 662 IVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQS 721
Query: 296 DGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSIT 337
YV++SN Y+ +W++ + ++ LM V KTPG S T
Sbjct: 722 SAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTT 763
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 111/201 (55%), Gaps = 1/201 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL LY CG+ +AR +FD+M RD+ +WN + VG +G A ++F MP+R+V SW
Sbjct: 47 LLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSW 106
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I L + G E+AL V+ M DG P+ T+ +VL AC+++ D FG H A
Sbjct: 107 NNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVK 166
Query: 122 NGFLRNVYVCNALIDMYVKCGCL-EEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
G +N++V NAL+ MY KCG + + G RVFE + + VS++++I G A
Sbjct: 167 TGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQ 226
Query: 181 XXXXMIRVGMKPNYVTFIGVL 201
M G++ + V +L
Sbjct: 227 MFRLMCEKGVQVDSVCLSNIL 247
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 135/307 (43%), Gaps = 39/307 (12%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHL------------------------ 37
LL +YA + A L+F +MP+ ++ +WNIMI
Sbjct: 290 LLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPN 349
Query: 38 -----------INVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEK 86
G V R +FSS+PQ +V +W +++ G + EEA+ F +M+
Sbjct: 350 EVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQF 409
Query: 87 DGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEE 146
KP++ T+ +L +CA+L LE GK +H +N ++ + LI +Y +C +E
Sbjct: 410 QNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEI 469
Query: 147 GYRVFEG-MRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG-MKPNYVTFIGVLHAC 204
+F+ + E + W+SMI GF + M + + PN +F VL +C
Sbjct: 470 SECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSC 529
Query: 205 SHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV 264
S + + GR ++ + G V L D+ + G ++ AR+ + + N V+
Sbjct: 530 SRLCSLLHGRQFHGLVVKS-GYVSDSFVETALTDMYCKCGEIDSARQFF-DAVLRKNTVI 587
Query: 265 WGALLGG 271
W ++ G
Sbjct: 588 WNEMIHG 594
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 119/262 (45%), Gaps = 18/262 (6%)
Query: 24 QRDIATWNIMIAHLINVGY-VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFS 82
++I N +++ G+ V +F S+ Q N S+T+VI GLA+ EA+++F
Sbjct: 170 DKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFR 229
Query: 83 EMEKDGSKPNEVTVVAVLV------ACAQLGDL---EFGKSVHRFAKGNGFLRNVYVCNA 133
M + G + + V + +L C L ++ E GK +H A GF ++++ N+
Sbjct: 230 LMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNS 289
Query: 134 LIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPN 193
L+++Y K + +F M E VVSW+ MIVGF M G +PN
Sbjct: 290 LLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPN 349
Query: 194 YVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVI 253
VT I VL AC G V+ GR + + + + P V + ++ S EEA
Sbjct: 350 EVTCISVLGACFRSGDVETGRRIFSSIPQ-----PSVSAWNAMLSGYSNYEHYEEAISNF 404
Query: 254 ANM---SVPPNRVVWGALLGGC 272
M ++ P++ +L C
Sbjct: 405 RQMQFQNLKPDKTTLSVILSSC 426
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 93/232 (40%), Gaps = 44/232 (18%)
Query: 112 GKSVHRFAKGNGFLRNVYVCNALIDMYVKCG---------------------------C- 143
GK +H F G + Y+CN L+D+Y++CG C
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 144 ---LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGV 200
L E VF+GM ER VVSW++MI M+ G P+ T V
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 201 LHACSHV-----GLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 255
L ACS V G+ G A+ T + D I G L+ + ++ G + + +
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGL--DKNIFVG----NALLSMYAKCGFIVDYGVRVFE 198
Query: 256 MSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYA 307
PN V + A++GG ++ A + R + + + D V +SN+ +
Sbjct: 199 SLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDS--VCLSNILS 248
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 69/137 (50%), Gaps = 8/137 (5%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + +AR F ++ ++N W +I+G G +EA+ ++ +M G KP+ +T V+VL
Sbjct: 568 GEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVL 627
Query: 101 VACAQLGDLEFG----KSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM-R 155
AC+ G +E G S+ R L + Y+C ++D + G LE+ ++ E
Sbjct: 628 TACSHSGLVETGLEILSSMQRIHGIEPELDH-YIC--IVDCLGRAGRLEDAEKLAEATPY 684
Query: 156 ERTVVSWSSMIVGFAMH 172
+ + V W ++ +H
Sbjct: 685 KSSSVLWEILLSSCRVH 701
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 170/304 (55%), Gaps = 7/304 (2%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ N ++ G + AR++F +P ++ SW S++ G G+ EAL +F M
Sbjct: 229 DVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMV 288
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
++G +P++V + +VL A++ + G+ +H + G + V NALI +Y K G L
Sbjct: 289 QNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLG 345
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
+ +F+ M ER VSW+++I + H M R KP+ +TF+ VL C+
Sbjct: 346 QACFIFDQMLERDTVSWNAII---SAHSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCA 402
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN-MSVPPNRVV 264
+ G+V+ G L ++M ++YGI P +EHY C+V+L RAG +EEA +I M + V
Sbjct: 403 NTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTV 462
Query: 265 WGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKS 324
WGALL C LH N + E A + L +L+ N+ + ++ +Y++A + E+V R+R++M
Sbjct: 463 WGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVD 522
Query: 325 RGVK 328
RG++
Sbjct: 523 RGLE 526
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 154/323 (47%), Gaps = 40/323 (12%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ LYASCG A +FD+M +RD + + +W
Sbjct: 133 LVRLYASCGYAEVAHEVFDRMSKRDSSPF-----------------------------AW 163
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
S+I G A+ G E+A+ ++ +M +DG KP+ T VL AC +G ++ G+++HR
Sbjct: 164 NSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVK 223
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
GF +VYV NAL+ MY KCG + + VF+ + + VSW+SM+ G+ H
Sbjct: 224 EGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDI 283
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT-IMRRDYGIVPGVEHYGCLVDLL 240
M++ G++P+ V VL + V GR L ++RR G+ + L+ L
Sbjct: 284 FRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRR--GMEWELSVANALIVLY 338
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKN-IVLAEEAMRHLSKLDLLNDGYY 299
S+ G+L +A + M + + V W A++ + N + E+ R +K D + +
Sbjct: 339 SKRGQLGQACFIFDQM-LERDTVSWNAIISAHSKNSNGLKYFEQMHRANAKPDGIT---F 394
Query: 300 VVMSNVYAEAGKWEEVSRIRRLM 322
V + ++ A G E+ R+ LM
Sbjct: 395 VSVLSLCANTGMVEDGERLFSLM 417
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 9/207 (4%)
Query: 76 EAL-KVFSEMEKDGSKPNEVT----VVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYV 130
EAL V +++E K +T ++L C L ++ G VH N+ +
Sbjct: 70 EALDSVITDLETSAQKGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGI 129
Query: 131 CNALIDMYVKCGCLEEGYRVFEGM--RERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRV 188
+ L+ +Y CG E + VF+ M R+ + +W+S+I G+A M
Sbjct: 130 SSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAED 189
Query: 189 GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEE 248
G+KP+ TF VL AC +G V G A+ + ++ G V LV + ++ G + +
Sbjct: 190 GVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKE-GFGYDVYVLNALVVMYAKCGDIVK 248
Query: 249 AREVIANMSVPPNRVVWGALLGGCRLH 275
AR V +M + V W ++L G H
Sbjct: 249 ARNVF-DMIPHKDYVSWNSMLTGYLHH 274
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 181 bits (459), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 182/344 (52%), Gaps = 10/344 (2%)
Query: 33 MIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPN 92
+I + V A + SM ++V S +++I GLA G +EA+ +F M PN
Sbjct: 369 LIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD---TPN 425
Query: 93 EVTVVAVLVACAQLGDLEFGKSVHRFAKGNGF-LRNVYVCNALIDMYVKCGCLEEGYRVF 151
+TV+++L AC+ DL K H A + ++ V +++D Y KCG +E R F
Sbjct: 426 AITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTF 485
Query: 152 EGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVD 211
+ + E+ ++SW+ +I +A++ M + G PN VT++ L AC+H GLV
Sbjct: 486 DQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVK 545
Query: 212 KGRALL-TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM--SVPPNRVVWGAL 268
KG + +++ D+ P ++HY C+VD+LSRAG ++ A E+I N+ V WGA+
Sbjct: 546 KGLMIFKSMVEEDHK--PSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAI 603
Query: 269 LGGCR-LHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGV 327
L GCR K +++ E + + +L+ L Y++ S+ +A WE+V+ +RRL+K R V
Sbjct: 604 LSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKV 663
Query: 328 KKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKM 371
+ G S + + F+AGD+ + ++ + L MK+
Sbjct: 664 RVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVVQSLHRCMKL 707
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 173/378 (45%), Gaps = 56/378 (14%)
Query: 45 AARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDG-SKPNEVTVVAVLVAC 103
+AR LF M +R+V SW+ VI + LK+F EM + ++P+ VTV +VL AC
Sbjct: 177 SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKAC 236
Query: 104 AQLGDLEFGKSVHRFAKGNGF-LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
+ D++ G+SVH F+ GF L +V+VCN+LIDMY K ++ +RVF+ R +VSW
Sbjct: 237 TVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSW 296
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS-----------HVGLVD 211
+S++ GF + M++ ++ + VT + +L C H ++
Sbjct: 297 NSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIR 356
Query: 212 KG----RALLTIMRRDYGIVPGVEHYGCLVDL---------------LSRAGRLEEAREV 252
+G L+ + Y V+ G ++D L+ AGR +EA +
Sbjct: 357 RGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISI 416
Query: 253 IANMSVPPNRVVWGALLGGCRLHKNIVLAEE----AMRHLSKLDLLNDGYYVVMSNVYAE 308
+M PN + +LL C + ++ ++ A+R ++ ++ G +V + YA+
Sbjct: 417 FCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIV--DAYAK 474
Query: 309 AGKWEEVSR-IRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLV 367
G E R ++ + + T S+ I+G+ + +A L
Sbjct: 475 CGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALA-----------------LFD 517
Query: 368 KMKMKGYIPDTSVVLLDL 385
+MK KGY P+ L L
Sbjct: 518 EMKQKGYTPNAVTYLAAL 535
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 106/224 (47%), Gaps = 7/224 (3%)
Query: 50 FSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDL 109
F M R+ SW +++GL G EE L FS++ G +PN T+V V+ AC L
Sbjct: 84 FDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSL--W 141
Query: 110 EFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGF 169
G+ +H + +GF V N+++ MY L ++F+ M ER V+SWS +I +
Sbjct: 142 FDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSY 200
Query: 170 AMHXXXXXXXXXXXXMI-RVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI-MRRDYGIV 227
M+ +P+ VT VL AC+ + +D GR++ +RR + +
Sbjct: 201 VQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLA 260
Query: 228 PGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
V L+D+ S+ ++ A V + + N V W ++L G
Sbjct: 261 D-VFVCNSLIDMYSKGFDVDSAFRVF-DETTCRNIVSWNSILAG 302
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 102/229 (44%), Gaps = 4/229 (1%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
V +A +F RN+ SW S++ G +EAL++F M ++ + +EVTVV++L
Sbjct: 278 VDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRV 337
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
C KS+H G+ N ++LID Y C +++ V + M + VVS
Sbjct: 338 CKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSC 397
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR 222
S+MI G A H +R PN +T I +L+ACS + + I R
Sbjct: 398 STMISGLA-HAGRSDEAISIFCHMR--DTPNAITVISLLNACSVSADLRTSKWAHGIAIR 454
Query: 223 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ + +VD ++ G +E AR ++ N + W ++
Sbjct: 455 RSLAINDISVGTSIVDAYAKCGAIEMARRTFDQIT-EKNIISWTVIISA 502
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
DI+ ++ G + AR F + ++N+ SWT +I A G+ ++AL +F EM+
Sbjct: 461 DISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMK 520
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
+ G PN VT +A L AC G ++ G + + ++ + ++DM + G ++
Sbjct: 521 QKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEID 580
Query: 146 EGYRVFEGMRERT---VVSWSSMIVG 168
+ + + E +W +++ G
Sbjct: 581 TAVELIKNLPEDVKAGASAWGAILSG 606
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 20/148 (13%)
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLV-ACAQLGDLEFGKSVH 116
+++ +S I + G E + +SE+++ G + N+ V ++ ACA+L L G
Sbjct: 9 LQALSSKIKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQG---- 64
Query: 117 RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXX 176
N++ D Y+KCG L G R F+ M R VSW+ ++ G +
Sbjct: 65 ---------------NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEE 109
Query: 177 XXXXXXXXMIRVGMKPNYVTFIGVLHAC 204
+ G +PN T + V+HAC
Sbjct: 110 EGLWWFSKLRVWGFEPNTSTLVLVIHAC 137
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 164/326 (50%), Gaps = 3/326 (0%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G+ HA ++F Q DI ++ ++ AR+ F SM RNV SW ++I G A
Sbjct: 260 GKQIHA-ILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFA 318
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
+ G EA+++F +M + +P+E+T +VL +CA+ + K V G +
Sbjct: 319 QNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLS 378
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
V N+LI Y + G L E F +RE +VSW+S+I A H M++
Sbjct: 379 VANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQ-K 437
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
++P+ +TF+ VL ACSH GLV +G M Y I EHY CL+DLL RAG ++EA
Sbjct: 438 LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEA 497
Query: 250 REVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEA 309
+V+ +M P+ A GGC +H+ + + L +++ Y ++SN Y
Sbjct: 498 SDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSE 557
Query: 310 GKWEEVSRIRRLMKSRGVK-KTPGCS 334
G W + + +R+ + KTPGCS
Sbjct: 558 GHWNQAALLRKRERRNCYNPKTPGCS 583
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 117/248 (47%), Gaps = 11/248 (4%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM--EKDGSKPNEVTVVA 98
G + AR +F ++ R++ W +++ GM +EA + M +K+ + + T +
Sbjct: 191 GLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSS 250
Query: 99 VLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERT 158
+L AC +E GK +H + ++ V AL++MY K L + FE M R
Sbjct: 251 LLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRN 306
Query: 159 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT 218
VVSW++MIVGFA + M+ ++P+ +TF VL +C+ + + + +
Sbjct: 307 VVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQA 366
Query: 219 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNI 278
++ + G + L+ SR G L EA ++ P+ V W +++G H
Sbjct: 367 MVTKK-GSADFLSVANSLISSYSRNGNLSEALLCFHSIR-EPDLVSWTSVIGALASHG-- 422
Query: 279 VLAEEAMR 286
AEE+++
Sbjct: 423 -FAEESLQ 429
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 135/299 (45%), Gaps = 34/299 (11%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGL----------AKCGMCEEALKVFSEMEKDGSKPNEVT 95
A LF MP RN+ +W +I+G+ A G C + +F+++ D V+
Sbjct: 90 ADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLD-----HVS 144
Query: 96 VVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR 155
+ ++ C +++ G +H G + + +L+ Y KCG + E RVFE +
Sbjct: 145 FMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVL 204
Query: 156 ERTVVSWSSMIVGFAMHXXXXXXXXXXXXM--IRVGMKPNYVTFIGVLHACSHVGLVDKG 213
+R +V W++++ + ++ M + + +Y TF +L AC +++G
Sbjct: 205 DRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQG 260
Query: 214 RALLTIMRR-DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGC 272
+ + I+ + Y V L+++ +++ L +ARE +M V N V W A++ G
Sbjct: 261 KQIHAILFKVSYQFDIPVA--TALLNMYAKSNHLSDARECFESM-VVRNVVSWNAMIVGF 317
Query: 273 RLHKNIVLAEEAMRHLSKLDLLN-----DGYYVVMSNVYAEAGKWEEVSRIRRLMKSRG 326
+ EAMR ++ L N + V+S+ + W E+ +++ ++ +G
Sbjct: 318 AQNGE---GREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIW-EIKQVQAMVTKKG 372
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/316 (33%), Positives = 162/316 (51%), Gaps = 6/316 (1%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ +I G + +AR +F +++V +W +I AK G+ EE + + +M+
Sbjct: 261 DLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMK 320
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
+ KPN T V +L +CA G++V + + + AL+DMY K G LE
Sbjct: 321 YEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLE 380
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMK--PNYVTFIGVLHA 203
+ +F M+++ V SW++MI G+ H M K PN +TF+ VL+A
Sbjct: 381 KAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNA 440
Query: 204 CSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRV 263
CSH GLV +G M Y P VEHYGC+VDLL RAG+LEEA E+I N+ + +
Sbjct: 441 CSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDST 500
Query: 264 VWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMK 323
W ALL CR++ N L E M L+++ + ++++ +A AG E+ S L K
Sbjct: 501 AWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPEK-SLDNELNK 559
Query: 324 SRGVKKTPGCSSITID 339
R K G S+I I+
Sbjct: 560 GR---KEAGYSAIEIE 572
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 126/292 (43%), Gaps = 37/292 (12%)
Query: 2 LLHLYASCGETRHARLMFDKMPQR-DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS 60
L+H Y CG+ AR +FD+MPQ D T++ ++ + V A DLF M + V
Sbjct: 166 LIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEV-- 223
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
N T+++ L A + LGDL +S H
Sbjct: 224 -----------------------------VVNVSTLLSFLSAISDLGDLSGAESAHVLCI 254
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
G ++++ ALI MY K G + R+F+ + VV+W+ MI +A
Sbjct: 255 KIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVW 314
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M MKPN TF+G+L +C++ GR + ++ + + + LVD+
Sbjct: 315 LLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTA-LVDMY 373
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLD 292
++ G LE+A E+ M + W A++ G H LA EA+ +K++
Sbjct: 374 AKVGLLEKAVEIFNRMK-DKDVKSWTAMISGYGAHG---LAREAVTLFNKME 421
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 10/160 (6%)
Query: 5 LYASCGETRHA---RLMFDKMPQRDIATWNIMIAHLIN----VGYVGAARDLFSSMPQRN 57
L +SC + A R + D + + IA I+ L++ VG + A ++F+ M ++
Sbjct: 334 LLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKD 393
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK--PNEVTVVAVLVACAQLGDLEFG-KS 114
V+SWT++I G G+ EA+ +F++ME++ K PNE+T + VL AC+ G + G +
Sbjct: 394 VKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRC 453
Query: 115 VHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM 154
R + F V ++D+ + G LEE Y + +
Sbjct: 454 FKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNL 493
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/352 (19%), Positives = 141/352 (40%), Gaps = 39/352 (11%)
Query: 14 HARLMFDKMPQRDIATWNIM-IAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCG 72
H ++ + + D A ++ + ++++ Y A +F + N+ + ++I G +
Sbjct: 48 HGYMVKTGLDKDDFAVSKLLAFSSVLDIRY---ASSIFEHVSNTNLFMFNTMIRGYSISD 104
Query: 73 MCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCN 132
E A VF+++ G + + + L +C++ + G+ +H A +GF+ + N
Sbjct: 105 EPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRN 164
Query: 133 ALIDMYVKCGCLEEGYRVFEGMRERT-VVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMK 191
ALI Y CG + + +VF+ M + V++S+++ G+ M + +
Sbjct: 165 ALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVV 224
Query: 192 PNYVTFIGVLHACSHVGLVDKGRA---------------LLTIMRRDYGIVPGVEH---- 232
N T + L A S +G + + L+T + YG G+
Sbjct: 225 VNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRI 284
Query: 233 -----------YGCLVDLLSRAGRLEEAREVIANM---SVPPNRVVWGALLGGCRLHKNI 278
+ C++D ++ G LEE ++ M + PN + LL C +
Sbjct: 285 FDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAA 344
Query: 279 VLAEEAMRHLSKLDLLNDGYY-VVMSNVYAEAGKWEEVSRIRRLMKSRGVKK 329
+ L + + D + ++YA+ G E+ I MK + VK
Sbjct: 345 FVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKS 396
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 162/315 (51%), Gaps = 5/315 (1%)
Query: 25 RDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMC-EEALKVFSE 83
R A ++ + G + A L +R++ S T++I G ++ C +A +F +
Sbjct: 247 RSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKD 306
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLR-NVYVCNALIDMYVKCG 142
M + +K +EV V ++L C + + G+ +H FA + +R +V + N+LIDMY K G
Sbjct: 307 MIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSG 366
Query: 143 CLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLH 202
+E+ FE M+E+ V SW+S+I G+ H M +KPN VTF+ +L
Sbjct: 367 EIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLS 426
Query: 203 ACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS--VPP 260
ACSH G + G + M +GI EH C++D+L+R+G LEEA +I + V
Sbjct: 427 ACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSL 486
Query: 261 NRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRR 320
+ WGA L CR H N+ L++ A L ++ Y+ +++VYA G W+ R+
Sbjct: 487 SSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRK 546
Query: 321 LMKSRG-VKKTPGCS 334
LMK G K PG S
Sbjct: 547 LMKESGSCNKAPGYS 561
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 95/173 (54%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
+++I + G V AR LF + +R+V SWT++I ++CG +AL +F EM ++ K
Sbjct: 51 DMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVK 110
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
N+ T +VL +C LG L+ G +H + N+ V +AL+ +Y +CG +EE
Sbjct: 111 ANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQ 170
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
F+ M+ER +VSW++MI G+ + M+ G KP+ TF +L A
Sbjct: 171 FDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 119/278 (42%), Gaps = 33/278 (11%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL LYA CG+ ARL FD SM +R++ SW
Sbjct: 154 LLSLYARCGKMEEARLQFD-------------------------------SMKERDLVSW 182
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I G + + +F M +G KP+ T ++L A + LE +H A
Sbjct: 183 NAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIK 242
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXX-XXXXXX 180
GF R+ + +L++ YVKCG L +++ EG ++R ++S +++I GF+
Sbjct: 243 LGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFD 302
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
MIR+ K + V +L C+ + V GR + + I V L+D+
Sbjct: 303 IFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMY 362
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNI 278
+++G +E+A M R W +L+ G H N
Sbjct: 363 AKSGEIEDAVLAFEEMKEKDVR-SWTSLIAGYGRHGNF 399
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 20/166 (12%)
Query: 115 VHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXX 174
+H + NGF N+ + + LID+Y+K G ++ ++F+ + +R VVSW++MI F+
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 175 XXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYG 234
M R +K N T+ VL +C +G + +G I VE
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQ----------IHGSVEKGN 143
Query: 235 C---------LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
C L+ L +R G++EEAR +M + V W A++ G
Sbjct: 144 CAGNLIVRSALLSLYARCGKMEEARLQFDSMK-ERDLVSWNAMIDG 188
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/284 (34%), Positives = 150/284 (52%), Gaps = 13/284 (4%)
Query: 55 QRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKS 114
+++ SW ++ G G EEA+ F +M+ + +PN VT V ++ A A+L L G S
Sbjct: 566 EKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMS 625
Query: 115 VHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXX 174
VH GF V N+L+DMY KCG +E + F + + +VSW++M+ +A H
Sbjct: 626 VHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGL 685
Query: 175 XXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYG 234
M +KP+ V+F+ VL AC H GLV++G+ + M + I VEHY
Sbjct: 686 ASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYA 745
Query: 235 CLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLL 294
C+VDLL +AG EA E++ M V + VWGALL R+H N+ L+ A+ L KL+ L
Sbjct: 746 CMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPL 805
Query: 295 NDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITI 338
N + Y++ + EV+ + R +KK P CS I +
Sbjct: 806 NPSH-------YSQDRRLGEVNNVSR------IKKVPACSWIEV 836
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 114/234 (48%), Gaps = 4/234 (1%)
Query: 39 NVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVA 98
N + AA +F + +++ SW +++ A G EE L++F M + N+V +
Sbjct: 246 NCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAAS 305
Query: 99 VLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERT 158
L A A +GDL G ++H +A G + +V V +L+ MY KCG LE ++F + +R
Sbjct: 306 ALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRD 365
Query: 159 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL-L 217
VVSWS+MI + M+R+ +KPN VT VL C+ V G+++
Sbjct: 366 VVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHC 425
Query: 218 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
++ D I +E ++ + ++ GR A + + + + V + AL G
Sbjct: 426 YAIKAD--IESELETATAVISMYAKCGRFSPALKAFERLPI-KDAVAFNALAQG 476
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 119/267 (44%), Gaps = 6/267 (2%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D++ +++ G + A LF ++ R+V SW+++I + G +EA+ +F +M
Sbjct: 334 DVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMM 393
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
+ KPN VT+ +VL CA + GKS+H +A + A+I MY KCG
Sbjct: 394 RIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFS 453
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
+ FE + + V+++++ G+ M G+ P+ T +G+L C+
Sbjct: 454 PALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCA 513
Query: 206 HVGLVDKGRALL-TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV 264
+G + I++ + V H L+++ ++ L A + + V
Sbjct: 514 FCSDYARGSCVYGQIIKHGFDSECHVAH--ALINMFTKCDALAAAIVLFDKCGFEKSTVS 571
Query: 265 WGALLGGCRLHKNIVLAEEAMRHLSKL 291
W ++ G LH AEEA+ ++
Sbjct: 572 WNIMMNGYLLHGQ---AEEAVATFRQM 595
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 131/306 (42%), Gaps = 8/306 (2%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ ++ T +I+ G A F +P ++ ++ ++ G + G +A V+
Sbjct: 433 ESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKN 492
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M+ G P+ T+V +L CA D G V+ +GF +V +ALI+M+ KC
Sbjct: 493 MKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDA 552
Query: 144 LEEGYRVFEGMR-ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLH 202
L +F+ E++ VSW+ M+ G+ +H M +PN VTF+ ++
Sbjct: 553 LAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVR 612
Query: 203 ACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR 262
A + + + G ++ + + + G LVD+ ++ G +E + + +S N+
Sbjct: 613 AAAELSALRVGMSVHSSLIQ-CGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEIS---NK 668
Query: 263 --VVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY-YVVMSNVYAEAGKWEEVSRIR 319
V W +L H A + + +L D ++ + + AG EE RI
Sbjct: 669 YIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIF 728
Query: 320 RLMKSR 325
M R
Sbjct: 729 EEMGER 734
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 1/172 (0%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM-EKDGSKPNEVTVVAVLVACA 104
+R +F S+ V W S+I G + G+ EAL F M E+ G P++ + L ACA
Sbjct: 52 SRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACA 111
Query: 105 QLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSS 164
D + G +H G +VY+ AL++MY K L +VF+ M + VV+W++
Sbjct: 112 GSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNT 171
Query: 165 MIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL 216
M+ G A + M + ++V+ ++ A S + D R L
Sbjct: 172 MVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCL 223
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 119/299 (39%), Gaps = 52/299 (17%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y + AR +FDKM +D+ TWN M++
Sbjct: 141 LVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVS-------------------------- 174
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
GLA+ G AL +F +M + V++ ++ A ++L + + +H
Sbjct: 175 -----GLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIK 229
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
GF+ + LIDMY C L VFE + + SW +M+ +A +
Sbjct: 230 KGFI--FAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLEL 287
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDY----GIVPGVEHYGCLV 237
M ++ N V L A ++VG + KG A+ DY G++ V L+
Sbjct: 288 FDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAI-----HDYAVQQGLIGDVSVATSLM 342
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLND 296
+ S+ G LE A ++ N+ + V W A++ E+A +H + L D
Sbjct: 343 SMYSKCGELEIAEQLFINIE-DRDVVSWSAMIAS---------YEQAGQHDEAISLFRD 391
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 154/309 (49%), Gaps = 5/309 (1%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N +I+ G + A LF ++N+ SW ++I G G E L+ FS + + +
Sbjct: 425 NALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVR 484
Query: 91 --PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGY 148
P+ T+ +L C L G H + +G + + NALI+MY +CG ++
Sbjct: 485 ILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSL 544
Query: 149 RVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG-MKPNYVTFIGVLHACSHV 207
VF M E+ VVSW+S+I ++ H M G + P+ TF VL ACSH
Sbjct: 545 EVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHA 604
Query: 208 GLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV--IANMSVPPNRVVW 265
GLV++G + M +G++ V+H+ CLVDLL RAG L+EA + I+ ++ VW
Sbjct: 605 GLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVW 664
Query: 266 GALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSR 325
AL C H ++ L + + L + + + YV +SN+YA AG W+E RR +
Sbjct: 665 WALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMI 724
Query: 326 GVKKTPGCS 334
G K GCS
Sbjct: 725 GAMKQRGCS 733
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 5/207 (2%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRN-VRS 60
LL LY G + FD++ + D+ +W +++ +G + A ++F MP+R+ V
Sbjct: 98 LLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAI 157
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
W ++I G + G E ++++F EM K G + ++ +L C G L+FGK VH
Sbjct: 158 WNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVI 216
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE--GMRERTVVSWSSMIVGFAMHXXXXXX 178
GF V NALI MY C + + VFE + R V+++ +I G A
Sbjct: 217 KAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA-GFKRDES 275
Query: 179 XXXXXXMIRVGMKPNYVTFIGVLHACS 205
M+ ++P +TF+ V+ +CS
Sbjct: 276 LLVFRKMLEASLRPTDLTFVSVMGSCS 302
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 105/216 (48%), Gaps = 9/216 (4%)
Query: 56 RNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSV 115
R+ ++ VI GLA +E+L VF +M + +P ++T V+V+ +C+ G V
Sbjct: 255 RDQVTFNVVIDGLAGFKR-DESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQV 310
Query: 116 HRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXX 175
H A G+ + V NA + MY ++VFE + E+ +V+W++MI +
Sbjct: 311 HGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLG 370
Query: 176 XXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGC 235
M +G+KP+ TF +L + +++ +A + +G+ +E
Sbjct: 371 KSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACII----KFGLSSKIEISNA 426
Query: 236 LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
L+ S+ G++E+A +++ S+ N + W A++ G
Sbjct: 427 LISAYSKNGQIEKA-DLLFERSLRKNLISWNAIISG 461
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 106/235 (45%), Gaps = 9/235 (3%)
Query: 44 GAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVAC 103
GAA +F S+ ++++ +W ++I + + + A+ V+ M G KP+E T ++L
Sbjct: 340 GAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATS 399
Query: 104 AQLGDLEFGKS-VHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
L LE ++ + +F G + + NALI Y K G +E+ +FE + ++SW
Sbjct: 400 LDLDVLEMVQACIIKF----GLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISW 455
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMI--RVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
+++I GF + ++ V + P+ T +L C + G +
Sbjct: 456 NAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYV 515
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
R +G L+++ S+ G ++ + EV MS + V W +L+ H
Sbjct: 516 LR-HGQFKETLIGNALINMYSQCGTIQNSLEVFNQMS-EKDVVSWNSLISAYSRH 568
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 170/313 (54%), Gaps = 5/313 (1%)
Query: 45 AARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACA 104
+A+ +F M +R+V WT +I G ++ G E A++ F EM ++ ++ + ++ +V+ AC+
Sbjct: 455 SAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACS 514
Query: 105 QLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSS 164
+ L G+ H A GF + VC AL+DMY K G E +F + W+S
Sbjct: 515 DMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNS 574
Query: 165 MIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDY 224
M+ ++ H ++ G P+ VT++ +L ACSH G +G+ L M ++
Sbjct: 575 MLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQM-KEQ 633
Query: 225 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRV--VWGALLGGCRLHKNIVLAE 282
GI G +HY C+V+L+S+AG ++EA E+I S P N +W LL C +N+ +
Sbjct: 634 GIKAGFKHYSCMVNLVSKAGLVDEALELI-EQSPPGNNQAELWRTLLSACVNTRNLQIGL 692
Query: 283 EAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITI-DGV 341
A + KLD + ++++SN+YA G+WE+V+ +RR ++ K PG S I + +
Sbjct: 693 YAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNN 752
Query: 342 VHEFVAGDETHPQ 354
F +GD+++P+
Sbjct: 753 TQVFSSGDQSNPE 765
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 168/372 (45%), Gaps = 22/372 (5%)
Query: 8 SCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYG 67
S G+ HAR++ D+ N ++ + G + A +F + N+ SW S+I G
Sbjct: 317 SLGKLIHARIIVSD-SLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISG 375
Query: 68 LAKCGMCEEALKVFSEMEK-DGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLR 126
++ G E+A+ ++ + + +P+E T A + A A+ GK +H G+ R
Sbjct: 376 CSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYER 435
Query: 127 NVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI 186
+V+V L+ MY K E +VF+ M+ER VV W+ MIVG + M
Sbjct: 436 SVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMY 495
Query: 187 RVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI-MRRDYGIVPGVEHYGCLVDLLSRAGR 245
R + + + V+ ACS + ++ +G + +R + V V G LVD+ + G+
Sbjct: 496 REKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSV--CGALVDMYGKNGK 553
Query: 246 LEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY------Y 299
E A E I +++ P+ W ++LG H + E+A+ + +L +G+ Y
Sbjct: 554 YETA-ETIFSLASNPDLKCWNSMLGAYSQHG---MVEKALSFFEQ--ILENGFMPDAVTY 607
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVK---KTPGC--SSITIDGVVHEFVAGDETHPQ 354
+ + + G + + MK +G+K K C + ++ G+V E + E P
Sbjct: 608 LSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPP 667
Query: 355 AKGIFEMWEKLL 366
E+W LL
Sbjct: 668 GNNQAELWRTLL 679
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 113/245 (46%), Gaps = 7/245 (2%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAK-CGMCEEALKVFSEMEKDGS 89
N +I+ + G + AR +F MP RNV S+ ++ ++ A + + M +
Sbjct: 136 NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYV 195
Query: 90 KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYR 149
KPN T +++ CA L D+ G S++ G+ NV V +++ MY CG LE R
Sbjct: 196 KPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARR 255
Query: 150 VFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGL 209
+F+ + R V+W++MIVG + M+ G+ P T+ VL+ CS +G
Sbjct: 256 IFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGS 315
Query: 210 VDKGRALLT--IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGA 267
G+ + I+ +P L+D+ G + EA V + PN V W +
Sbjct: 316 YSLGKLIHARIIVSDSLADLP---LDNALLDMYCSCGDMREAFYVFGRIH-NPNLVSWNS 371
Query: 268 LLGGC 272
++ GC
Sbjct: 372 IISGC 376
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + +AR +F + R+ +W ++I G K E+ L F M G P + T VL
Sbjct: 248 GDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVL 307
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
C++LG GK +H + L ++ + NAL+DMY CG + E + VF + +V
Sbjct: 308 NGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLV 367
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGM-KPNYVTFIGVLHACSH 206
SW+S+I G + + ++R+ +P+ TF + A +
Sbjct: 368 SWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAE 414
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 24/257 (9%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKC-GMCEEALKVFSEMEKDGS 89
N +I+ + + AR +F MPQRN+ + ++GL+ + S++ K GS
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVT----LFGLSAVFEYVSMGSSLHSQIIKLGS 81
Query: 90 -------KPNEV--TVVAVLVACAQLGDLEFGKSVHRF---AKGNGFLRNVYVCNALIDM 137
NE+ +VV + C + L+ + +H A + Y N LI M
Sbjct: 82 FQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISM 141
Query: 138 YVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXX-MIRVGMKPNYVT 196
YV+CG LE+ +VF+ M R VVS++++ ++ + M +KPN T
Sbjct: 142 YVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSST 201
Query: 197 FIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM 256
F ++ C+ + V G +L + + + G V ++ + S G LE AR + +
Sbjct: 202 FTSLVQVCAVLEDVLMGSSLNSQIIK-LGYSDNVVVQTSVLGMYSSCGDLESARRIFDCV 260
Query: 257 SVPPNR--VVWGALLGG 271
+ NR V W ++ G
Sbjct: 261 N---NRDAVAWNTMIVG 274
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 168/332 (50%), Gaps = 37/332 (11%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y+ C + RHA ++F ++ ++TWN
Sbjct: 363 LITMYSRCSDLRHAFIVFQQVEANSLSTWN------------------------------ 392
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA-K 120
S+I G A EE + EM G PN +T+ ++L A++G+L+ GK H + +
Sbjct: 393 -SIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILR 451
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
+ + + N+L+DMY K G + RVF+ MR+R V+++S+I G+
Sbjct: 452 RQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALA 511
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M R G+KP++VT + VL ACSH LV +G L T M +GI +EHY C+VDL
Sbjct: 512 WFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLY 571
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHL---SKLDLLNDG 297
RAG L++AR++ + P+ + LL C +H N + E A L +K + L G
Sbjct: 572 CRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHL--G 629
Query: 298 YYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKK 329
+Y++++++YA G W ++ ++ L+ GV+K
Sbjct: 630 HYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 129/276 (46%), Gaps = 7/276 (2%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSM----PQRN 57
L+ +Y G+ AR +FD+M +RD +WN +I + +G A L M + +
Sbjct: 225 LISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEAS 284
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
+ +W ++ G + G AL M + V ++ L AC+ +G L++GK H
Sbjct: 285 IVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHC 344
Query: 118 FA-KGNGFLRNV-YVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXX 175
+ F ++ V N+LI MY +C L + VF+ + ++ +W+S+I GFA +
Sbjct: 345 LVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERS 404
Query: 176 XXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGC 235
M+ G PN++T +L + VG + G+ + R + +
Sbjct: 405 EETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNS 464
Query: 236 LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
LVD+ +++G + A+ V +M ++V + +L+ G
Sbjct: 465 LVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDG 499
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 104/248 (41%), Gaps = 39/248 (15%)
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
W +I + +E++ V+ M G + +E T +V+ ACA L D +G+ VH +
Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIE 211
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
+ N+YVCNALI MY + G ++ R+F+ M ER VSW+++I +
Sbjct: 212 VSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFK 271
Query: 181 XXXXMIRVGMKPNYVT-------------FIGVLH----------------------ACS 205
M G++ + VT +IG L+ ACS
Sbjct: 272 LLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACS 331
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHY-GCLVDLLSRAGRLEEAREVIANMSVPPNRV- 263
H+G + G+ ++ R +++ L+ + SR L A I V N +
Sbjct: 332 HIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHA--FIVFQQVEANSLS 389
Query: 264 VWGALLGG 271
W +++ G
Sbjct: 390 TWNSIISG 397
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 168/332 (50%), Gaps = 37/332 (11%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y+ C + RHA ++F ++ ++TWN
Sbjct: 363 LITMYSRCSDLRHAFIVFQQVEANSLSTWN------------------------------ 392
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA-K 120
S+I G A EE + EM G PN +T+ ++L A++G+L+ GK H + +
Sbjct: 393 -SIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILR 451
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
+ + + N+L+DMY K G + RVF+ MR+R V+++S+I G+
Sbjct: 452 RQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALA 511
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M R G+KP++VT + VL ACSH LV +G L T M +GI +EHY C+VDL
Sbjct: 512 WFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLY 571
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHL---SKLDLLNDG 297
RAG L++AR++ + P+ + LL C +H N + E A L +K + L G
Sbjct: 572 CRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHL--G 629
Query: 298 YYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKK 329
+Y++++++YA G W ++ ++ L+ GV+K
Sbjct: 630 HYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 129/276 (46%), Gaps = 7/276 (2%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSM----PQRN 57
L+ +Y G+ AR +FD+M +RD +WN +I + +G A L M + +
Sbjct: 225 LISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEAS 284
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
+ +W ++ G + G AL M + V ++ L AC+ +G L++GK H
Sbjct: 285 IVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHC 344
Query: 118 FA-KGNGFLRNV-YVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXX 175
+ F ++ V N+LI MY +C L + VF+ + ++ +W+S+I GFA +
Sbjct: 345 LVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERS 404
Query: 176 XXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGC 235
M+ G PN++T +L + VG + G+ + R + +
Sbjct: 405 EETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNS 464
Query: 236 LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
LVD+ +++G + A+ V +M ++V + +L+ G
Sbjct: 465 LVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDG 499
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 104/248 (41%), Gaps = 39/248 (15%)
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
W +I + +E++ V+ M G + +E T +V+ ACA L D +G+ VH +
Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIE 211
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
+ N+YVCNALI MY + G ++ R+F+ M ER VSW+++I +
Sbjct: 212 VSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFK 271
Query: 181 XXXXMIRVGMKPNYVT-------------FIGVLH----------------------ACS 205
M G++ + VT +IG L+ ACS
Sbjct: 272 LLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACS 331
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHY-GCLVDLLSRAGRLEEAREVIANMSVPPNRV- 263
H+G + G+ ++ R +++ L+ + SR L A I V N +
Sbjct: 332 HIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHA--FIVFQQVEANSLS 389
Query: 264 VWGALLGG 271
W +++ G
Sbjct: 390 TWNSIISG 397
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 168 bits (425), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 104/313 (33%), Positives = 164/313 (52%), Gaps = 19/313 (6%)
Query: 33 MIAHLINVGYVGAARDLFSSMPQRNVRS----WTSVIYGLAKCGMCEEALKVFSEMEKDG 88
MI+ +VG + A +++S+ NV + S+I G + +EA + S
Sbjct: 225 MISFYSSVGLINEAMKVYNSL---NVHTDEVMLNSLISGCIRNRNYKEAFLLMSR----- 276
Query: 89 SKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGY 148
+PN + + L C+ DL GK +H A NGF+ + +CN L+DMY KCG + +
Sbjct: 277 QRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQAR 336
Query: 149 RVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR--VGMKPNYVTFIGVLHACSH 206
+F + ++VVSW+SMI +A++ M G+ PN VTF+ V+ AC+H
Sbjct: 337 TIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAH 396
Query: 207 VGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR---- 262
GLV +G+ +M+ Y +VPG EHY C +D+LS+AG EE ++ M N+
Sbjct: 397 AGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPC 456
Query: 263 VVWGALLGGCRLHKNIVLAEEAMRHL-SKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRL 321
+W A+L C L+ ++ E R L + N YV++SN YA GKW+ V +R
Sbjct: 457 AIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGK 516
Query: 322 MKSRGVKKTPGCS 334
+K++G+ KT G S
Sbjct: 517 LKNKGLVKTAGHS 529
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 123/262 (46%), Gaps = 8/262 (3%)
Query: 19 FDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEAL 78
F ++ + + N+++ + + A LF +PQR++ S S + + G + L
Sbjct: 10 FIRLGNVTVKSTNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTL 69
Query: 79 KVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMY 138
+F ++ + + T VL AC+ L E G+ VH G ALIDMY
Sbjct: 70 ALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMY 129
Query: 139 VKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFI 198
K G L + RVFE + E+ +VSW++++ GF + M R ++ + T
Sbjct: 130 SKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLS 189
Query: 199 GVLHACSHVGLVDKGR---ALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 255
V+ C+ + ++ +G+ A++ + RD +V G ++ S G + EA +V +
Sbjct: 190 SVVKTCASLKILQQGKQVHAMVVVTGRDL-VVLGT----AMISFYSSVGLINEAMKVYNS 244
Query: 256 MSVPPNRVVWGALLGGCRLHKN 277
++V + V+ +L+ GC ++N
Sbjct: 245 LNVHTDEVMLNSLISGCIRNRN 266
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 186/400 (46%), Gaps = 27/400 (6%)
Query: 72 GMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVC 131
G EA++V +E G + + ++ + C + LE + VH +V
Sbjct: 98 GNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGAR 157
Query: 132 NALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMK 191
NA+I+MY C +++ +VFE M E + M+ F + G K
Sbjct: 158 NAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNK 217
Query: 192 PNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEARE 251
PN F V C+ G V +G M R+YGIVP +EHY + +L+ +G L+EA
Sbjct: 218 PNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALN 277
Query: 252 VIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGK 311
+ M + P+ VW L+ R+H ++ L + + KLD A +
Sbjct: 278 FVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLD----------------ATR 321
Query: 312 WEEVSR--IRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKM 369
++VS + S VKK P S F D +HPQ I+E L ++
Sbjct: 322 LDKVSSAGLVATKASDFVKKEPSTRSEPY--FYSTFRPVDSSHPQMNIIYETLMSLRSQL 379
Query: 370 KMKGYIPDTSV---VLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVC 426
K GY+PDT +++ +E+ +Q IF YR E++A+V L+ +KP +I ++ N+R+
Sbjct: 380 KEMGYVPDTRYYRSLIMAMENKEQ--IFGYR--EEIAVVESLLKSKPRSAITLLTNIRIV 435
Query: 427 EDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
DCH KL+S I R+++ RD +H FK+G C C + W
Sbjct: 436 GDCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 124/226 (54%), Gaps = 2/226 (0%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGD 108
L S++ Q + SW I ++ EE +++F M + +P++ T V++L C++L D
Sbjct: 501 LISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCD 560
Query: 109 LEFGKSVHRFAKGNGF-LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIV 167
L G S+H F + +VCN LIDMY KCG + +VFE RE+ +++W+++I
Sbjct: 561 LTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALIS 620
Query: 168 GFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIV 227
+H + +G KP+ V+FI +L AC H G+V +G L M +DYG+
Sbjct: 621 CLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVE 679
Query: 228 PGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCR 273
P ++HY C VDLL+R G L+EA +I M P + VW L GC
Sbjct: 680 PEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCN 725
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 134/306 (43%), Gaps = 35/306 (11%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
+I+ N +I+ G A +F ++ SW ++I AK +ALK+F M
Sbjct: 249 EISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMP 308
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
+ G PN+ T V+VL + + L G+ +H NG + + NALID Y KCG LE
Sbjct: 309 EHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLE 368
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
+ F+ +R++ +V W++++ G+A + M+++G +P TF L +C
Sbjct: 369 DSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCC 427
Query: 206 ------------HVGLVDKGRALLTIMRR--------------DYGIVP-GVEHYGCLVD 238
+G D L ++MR D+ P V +
Sbjct: 428 VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAG 487
Query: 239 LLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCR---LHKNIVLAEEAMRHLSKLDLLN 295
+ SR G+ E+ ++I+ + P+ V W + C H+ ++ E +H+ + ++
Sbjct: 488 IYSRRGQYHESVKLISTLE-QPDTVSWNIAIAACSRSDYHEEVI---ELFKHMLQSNIRP 543
Query: 296 DGYYVV 301
D Y V
Sbjct: 544 DKYTFV 549
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 2/226 (0%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A +F MP +++ +W ++ L G +E + F E+ + G+ E + + VL +
Sbjct: 168 AEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSC 227
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
+ DL+ K +H A G + V N+LI Y KCG R+F+ +VSW+++
Sbjct: 228 VKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAI 287
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
I A M G PN T++ VL S V L+ GR + ++ ++ G
Sbjct: 288 ICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKN-G 346
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
G+ L+D ++ G LE++R + + N V W ALL G
Sbjct: 347 CETGIVLGNALIDFYAKCGNLEDSR-LCFDYIRDKNIVCWNALLSG 391
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 3/187 (1%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N +I+ +G V A +F MP+RN S+ ++I G +K G ++A VFSEM G
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNG-FLRNVYVCNALIDMYVKCGCLEEGYR 149
PN+ TV L++CA L D+ G +H + G F+ + +V L+ +Y + LE +
Sbjct: 113 PNQSTVSG-LLSCASL-DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQ 170
Query: 150 VFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGL 209
VFE M +++ +W+ M+ ++R+G +F+GVL S V
Sbjct: 171 VFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKD 230
Query: 210 VDKGRAL 216
+D + L
Sbjct: 231 LDISKQL 237
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 116/283 (40%), Gaps = 23/283 (8%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARD------LFSSMPQ 55
L+ YA CG +RL FD + ++I WN +++ GY A +D LF M Q
Sbjct: 357 LIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLS-----GY--ANKDGPICLSLFLQMLQ 409
Query: 56 RNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSV 115
R K E ++ S + + G + N+ + +++ + A+ + +
Sbjct: 410 MGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLL 469
Query: 116 HRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXX 175
+A G +V N + +Y + G E ++ + + VSW+ I +
Sbjct: 470 LDWASGP---TSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYH 526
Query: 176 XXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL-TIMRRDYGIVPGVEHYG 234
M++ ++P+ TF+ +L CS + + G ++ I + D+ + +
Sbjct: 527 EEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSC---ADTFV 583
Query: 235 C--LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
C L+D+ + G + +V + N + W AL+ +H
Sbjct: 584 CNVLIDMYGKCGSIRSVMKVFEE-TREKNLITWTALISCLGIH 625
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 6/164 (3%)
Query: 96 VVAVLVACAQLGDLEFGKSVHRFAKG--NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEG 153
VV++L C + K++H + + L+ VYVCN +I +Y K G + +VF+
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ 74
Query: 154 MRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKG 213
M ER VS++++I G++ + M G PN T G+L +C+ + + +
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCASLDV--RA 131
Query: 214 RALLTIMRRDYGIVPGVEHYG-CLVDLLSRAGRLEEAREVIANM 256
L + YG+ G CL+ L R LE A +V +M
Sbjct: 132 GTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDM 175
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 64/145 (44%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G + H + D N++I G + + +F ++N+ +WT++I L
Sbjct: 564 GSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLG 623
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
G +EAL+ F E G KP+ V+ +++L AC G ++ G + + K G +
Sbjct: 624 IHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMD 683
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGM 154
+D+ + G L+E + M
Sbjct: 684 HYRCAVDLLARNGYLKEAEHLIREM 708
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 138/241 (57%), Gaps = 8/241 (3%)
Query: 2 LLHLYASCGETRHARLMFDKM-PQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS 60
LL ++A C + + AR +F+++ QR++ TWN MI+ +G + +AR LF +MP+RNV S
Sbjct: 305 LLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVS 364
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDG-SKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
W S+I G A G A++ F +M G SKP+EVT+++VL AC + DLE G + +
Sbjct: 365 WNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYI 424
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
+ N N +LI MY + G L E RVF+ M+ER VVS++++ FA +
Sbjct: 425 RKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETL 484
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M G++P+ VT+ VL AC+ GL+ +G+ + +R P +HY C+ DL
Sbjct: 485 NLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYACM-DL 538
Query: 240 L 240
L
Sbjct: 539 L 539
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 134/284 (47%), Gaps = 34/284 (11%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
Y G A +FD MP+ D+ +W +MI V + AR F MP+++V SW +++
Sbjct: 177 YWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAML 236
Query: 66 YGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL 125
G A+ G E+AL++F++M + G +PNE T V V+ AC+ D +S+ +
Sbjct: 237 SGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVR 296
Query: 126 RNVYVCNALIDMYVKC--------------------------------GCLEEGYRVFEG 153
N +V AL+DM+ KC G + ++F+
Sbjct: 297 LNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDT 356
Query: 154 MRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG-MKPNYVTFIGVLHACSHVGLVDK 212
M +R VVSW+S+I G+A + MI G KP+ VT I VL AC H+ ++
Sbjct: 357 MPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLEL 416
Query: 213 GRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM 256
G ++ +R++ I Y L+ + +R G L EA+ V M
Sbjct: 417 GDCIVDYIRKN-QIKLNDSGYRSLIFMYARGGNLWEAKRVFDEM 459
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 104/257 (40%), Gaps = 60/257 (23%)
Query: 25 RDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM 84
+D N+++ + V +AR +F + QR W +I G K G EEA K+F M
Sbjct: 134 KDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMM 193
Query: 85 EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCL 144
+ N+V V++ GF K L
Sbjct: 194 PE-----NDVVSWTVMIT--------------------GF--------------AKVKDL 214
Query: 145 EEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHAC 204
E + F+ M E++VVSW++M+ G+A + M+R+G++PN T++ V+ AC
Sbjct: 215 ENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISAC 274
Query: 205 SH----------VGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIA 254
S V L+D+ R L + L+D+ ++ ++ AR +
Sbjct: 275 SFRADPSLTRSLVKLIDEKRVRLNCFVK-----------TALLDMHAKCRDIQSARRIFN 323
Query: 255 NMSVPPNRVVWGALLGG 271
+ N V W A++ G
Sbjct: 324 ELGTQRNLVTWNAMISG 340
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 189/391 (48%), Gaps = 16/391 (4%)
Query: 76 EALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALI 135
EAL+V +E G + ++ + C ++ LE + VH + + +I
Sbjct: 95 EALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITP----LDARSYHTVI 150
Query: 136 DMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYV 195
+MY C ++ VF M +R +W +MI A + I G KP+
Sbjct: 151 EMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKE 210
Query: 196 TFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 255
F V AC +G +++G M RDYG+V +E Y ++++L+ G L+EA + +
Sbjct: 211 IFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVER 270
Query: 256 MSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEV 315
M+V P+ +W L+ C + + L + + KLD V A+A +
Sbjct: 271 MTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKESNAGLVAAKASD-SAM 329
Query: 316 SRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYI 375
+++ L + ++ P +HEF AGD +H G + L V+M G++
Sbjct: 330 EKLKELRYCQMIRDDPK-------KRMHEFRAGDTSHL---GTVSAFRSLKVQMLDIGFV 379
Query: 376 PDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKL 435
P T V + +E+ +++E L+R S KLA + +IN++ + +++N+R C D H FK+
Sbjct: 380 PATRVCFVTVEEEEKEEQLLFR-SNKLAFAHAIINSEARRPLTVLQNMRTCIDGHNTFKM 438
Query: 436 VSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
+S I R ++ RD+ ++H +K+G C+CKDYW
Sbjct: 439 ISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 87/173 (50%), Gaps = 11/173 (6%)
Query: 2 LLHLYASCGETR---HARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNV 58
LL L CGE AR++ D + D +++ +I A ++F+ MP+RN
Sbjct: 115 LLGLAKLCGEVEALEEARVVHDCITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNS 174
Query: 59 RSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG----KS 114
+W ++I LAK G E A+ +F+ ++G+KP++ AV AC +GD+ G +S
Sbjct: 175 ETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFES 234
Query: 115 VHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMI 166
++R G + ++ +I+M CG L+E E M E +V W +++
Sbjct: 235 MYR---DYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLM 284
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 168/339 (49%), Gaps = 11/339 (3%)
Query: 7 ASCGETRHARL-----MFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
ASC +R+ +L F +MP D T+N +I + G A + S MP N SW
Sbjct: 231 ASC--SRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSW 288
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+++ G EA + F++M G + +E ++ VL A A L + +G +H A
Sbjct: 289 NTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHK 348
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
G V V +ALIDMY KCG L+ +F M + ++ W+ MI G+A +
Sbjct: 349 LGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKL 408
Query: 182 XXXMIRVG-MKPNYVTFIGVLHACSHVGL-VDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
+ + +KP+ TF+ +L CSH + ++ +M +Y I P VEH L+
Sbjct: 409 FNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRA 468
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL-DLLNDGY 298
+ + G + +A++VI + V W ALLG C K++ A+ + +L D D Y
Sbjct: 469 MGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEY 528
Query: 299 -YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSI 336
Y+VMSN+YA +W EV +IR++M+ GV K G S I
Sbjct: 529 LYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWI 567
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 42/227 (18%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A +F MP +V SW S++ G + G +E + +F E+ + PNE + A L ACA+
Sbjct: 109 AHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACAR 168
Query: 106 LGDLEFGKSVHRFAKGNGFLR-NVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSS 164
L G +H G + NV V N LIDMY KCG +++ VF+ M E+ VSW++
Sbjct: 169 LHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNA 228
Query: 165 MIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDY 224
++ +CS G ++ G M
Sbjct: 229 IVA-----------------------------------SCSRNGKLELGLWFFHQMPN-- 251
Query: 225 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
P Y L+D ++G A +V+++M PN W +L G
Sbjct: 252 ---PDTVTYNELIDAFVKSGDFNNAFQVLSDMP-NPNSSSWNTILTG 294
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 132/295 (44%), Gaps = 15/295 (5%)
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
SW++++ LA+ G L+ E+ DG KP+ +V +L G + + +H +
Sbjct: 23 SWSTIVPALARFGSIG-VLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
+GF+ N + N+L+ Y LE+ ++VF+ M + V+SW+S++ G+
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGI 141
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYG-CLVD 238
+ R + PN +F L AC+ + L G + + + + G+ G G CL+D
Sbjct: 142 CLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVK-LGLEKGNVVVGNCLID 200
Query: 239 LLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY 298
+ + G +++A V +M + V W A++ C + + L + D +
Sbjct: 201 MYGKCGFMDDAVLVFQHME-EKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVT--- 256
Query: 299 YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSS--ITIDGVVHEFVAGDET 351
Y + + + ++G + ++ M + P SS + G V+ +G+ T
Sbjct: 257 YNELIDAFVKSGDFNNAFQVLSDMPN------PNSSSWNTILTGYVNSEKSGEAT 305
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/326 (19%), Positives = 117/326 (35%), Gaps = 82/326 (25%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVR-- 59
L+ Y + A +FD+MP D+ +WN +++ + G LF + + +V
Sbjct: 96 LMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPN 155
Query: 60 --SWTSVIYGLA------------------------------------KCGMCEEALKVF 81
S+T+ + A KCG ++A+ VF
Sbjct: 156 EFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVF 215
Query: 82 SEMEKDGSKPNEVTVVAVLVACAQLGDLEFGK-SVHRFAKGNGFLRNVYVCNALIDMYVK 140
ME+ + V+ A++ +C++ G LE G H+ + N LID +VK
Sbjct: 216 QHMEEK----DTVSWNAIVASCSRNGKLELGLWFFHQMPN-----PDTVTYNELIDAFVK 266
Query: 141 CGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFI-- 198
G ++V M SW++++ G+ M G++ + +
Sbjct: 267 SGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIV 326
Query: 199 -------------GVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGR 245
++HAC+H G+ V L+D+ S+ G
Sbjct: 327 LAAVAALAVVPWGSLIHACAH----------------KLGLDSRVVVASALIDMYSKCGM 370
Query: 246 LEEAREVIANMSVPPNRVVWGALLGG 271
L+ A + M N +VW ++ G
Sbjct: 371 LKHAELMFWTMP-RKNLIVWNEMISG 395
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 150/292 (51%), Gaps = 2/292 (0%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL--VACAQL 106
L+ S+P N+ S++ L CG+ ++ +++F M +G+ +EVT+ VL ++ +
Sbjct: 373 LYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLP 432
Query: 107 GDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMI 166
L VH A +G+ +V V +LID Y K G E +VF+ + + +S+I
Sbjct: 433 ESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSII 492
Query: 167 VGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGI 226
G+A + M R+ + P+ VT + VL CSH GLV++G + + YGI
Sbjct: 493 NGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGI 552
Query: 227 VPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMR 286
PG + Y C+VDLL RAG +E+A ++ + V W +LL CR+H+N + A
Sbjct: 553 SPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAE 612
Query: 287 HLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITI 338
L L+ N Y+ +S Y E G +E +IR + SR + + G SS+ +
Sbjct: 613 VLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSVVV 664
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 137/297 (46%), Gaps = 16/297 (5%)
Query: 14 HARLMFDKMPQRDI---ATWNIMIAHLINV--GYVGAARDL------FSSMPQRNVRSWT 62
H RL+++ + + WNI + NV Y A DL F+++P+++V SW
Sbjct: 225 HDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWN 284
Query: 63 SVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGN 122
S++ A G ++L +FS+M+ G +P+ ++ L C++ D++ GK +H +
Sbjct: 285 SIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKM 344
Query: 123 GF-LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
GF + +++V +ALIDMY KC +E +++ + + +S++
Sbjct: 345 GFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEM 404
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRA--LLTIMRRDYGIVPGVEHYGCLVDL 239
MI G + VT VL A S + L + + L+ G V L+D
Sbjct: 405 FGLMIDEGTGIDEVTLSTVLKALS-LSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDA 463
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLND 296
+++G+ E +R+V + PN +++ G + + +R + +++L+ D
Sbjct: 464 YTKSGQNEVSRKVFDELDT-PNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPD 519
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 114/256 (44%), Gaps = 3/256 (1%)
Query: 18 MFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEA 77
++ P + T N I LI G + +A + F M R+V ++ +I G ++ G A
Sbjct: 37 FLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRA 96
Query: 78 LKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDM 137
+++++EM G + + T +VL C+ G VH GF N++V +AL+ +
Sbjct: 97 IELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGL 156
Query: 138 YVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTF 197
Y ++ ++F+ M +R + + ++ F M G+ N +T+
Sbjct: 157 YACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTY 216
Query: 198 IGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS 257
++ CSH LV +G+ L +++ + + + LVD S G L + +
Sbjct: 217 CYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFN--A 274
Query: 258 VPPNRVV-WGALLGGC 272
VP V+ W +++ C
Sbjct: 275 VPEKDVISWNSIVSVC 290
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+A +I G +R +F + N+ TS+I G A+ GM + +K+ EM+
Sbjct: 453 DVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMD 512
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSV-----HRFAKGNGFLRNVYVCNALIDMYVK 140
+ P+EVT+++VL C+ G +E G+ + ++ G R +Y C ++D+ +
Sbjct: 513 RMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPG--RKLYAC--MVDLLGR 568
Query: 141 CGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMH 172
G +E+ R+ R + V+WSS++ +H
Sbjct: 569 AGLVEKAERLLLQARGDADCVAWSSLLQSCRIH 601
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 157/332 (47%), Gaps = 19/332 (5%)
Query: 32 IMIAHLINVGYVGAARDLFSSMPQ--------RNVRSWTSVI-------YGLAKCGMCEE 76
I + L N +GA D+FS + R + W SV+ Y CG E+
Sbjct: 262 IKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCG--ED 319
Query: 77 ALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALID 136
AL++F +P++ T +VL + + L+ G VH GF + V +L++
Sbjct: 320 ALRLFILAMTQSVRPDKFTFSSVLSSMNAVM-LDHGADVHSLVIKLGFDLDTAVATSLME 378
Query: 137 MYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI-RVGMKPNYV 195
MY K G ++ VF + ++ W+++I+G A + ++ +KP+ V
Sbjct: 379 MYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRV 438
Query: 196 TFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 255
T +G+L AC + G V++G + + M + +G+ PG EHY C+++LL R G + EA+++
Sbjct: 439 TLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADK 498
Query: 256 MSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEV 315
+ P+ +W +L + LAE + + + + + Y+V+ +Y +WE
Sbjct: 499 IPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENS 558
Query: 316 SRIRRLMKSRGVKKTPGCSSITIDGVVHEFVA 347
++R M +K G S I+I+ V F A
Sbjct: 559 VKLRYAMNEHKLKSAQGSSKISIESSVFSFEA 590
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 144/287 (50%), Gaps = 13/287 (4%)
Query: 3 LHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWT 62
L LY G +A +FD +P ++ TWN+ + L GY+ A DLF MP+R+V SW
Sbjct: 46 LQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWN 105
Query: 63 SVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVT--VVAVLVACAQLGDLEFGKSVHRFAK 120
++I GL CG E ++VF +M++ +P E T ++A LV C + G+ +H A
Sbjct: 106 TMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVR-----HGEQIHGNAI 160
Query: 121 GNGFLR-NVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
+G R N+ V N+++DMY + G + VF M +R VVSW+ +I+ +
Sbjct: 161 CSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVAL 220
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M + ++P+ T V+ CS + + KG+ L + + G + G +D+
Sbjct: 221 DQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIK-MGFLSNSIVLGAGIDM 279
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMR 286
S+ RL+++ ++ + + V+ +++G H E+A+R
Sbjct: 280 FSKCNRLDDSVKLFRELE-KWDSVLCNSMIGSYSWH---CCGEDALR 322
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 138/274 (50%), Gaps = 12/274 (4%)
Query: 31 NIMIAHLI-----NVGYVGAARDLFSSMPQ-RNVRSWTSVIYGLAKCGMCEEALKVFSEM 84
N+++A+ + G + +A F M + R+ SW +++ G+A+ G E+AL F M
Sbjct: 429 NVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM 488
Query: 85 EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCL 144
+ + +KP++ T+ +L CA + L GK++H F +G+ +V + A++DMY KC C
Sbjct: 489 QVE-AKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCF 547
Query: 145 EEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHAC 204
+ VF+ R ++ W+S+I G + + G+KP++VTF+G+L AC
Sbjct: 548 DYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQAC 607
Query: 205 SHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV 264
G V+ G + M Y I P VEHY C+++L + G L + E + M P +
Sbjct: 608 IREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQM 667
Query: 265 WGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY 298
+ C+ ++ L A + L+ND Y
Sbjct: 668 LTRINDACQRYRWSKLGAWAAKR-----LMNDHY 696
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 136/272 (50%), Gaps = 4/272 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
+ +Y C AR +FD+ +D+ +W ++ G AR+LF MP+RN+ SW
Sbjct: 304 VFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSW 363
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+++ G +EAL + M ++ + VT+V +L C+ + D++ GK H F
Sbjct: 364 NAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYR 423
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRE-RTVVSWSSMIVGFAMHXXXXXXXX 180
+G+ NV V NAL+DMY KCG L+ F M E R VSW++++ G A
Sbjct: 424 HGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALS 483
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M +V KP+ T +L C+++ ++ G+A+ + RD G V G +VD+
Sbjct: 484 FFEGM-QVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRD-GYKIDVVIRGAMVDMY 541
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGC 272
S+ + A EV + + ++W +++ GC
Sbjct: 542 SKCRCFDYAIEVFKE-AATRDLILWNSIIRGC 572
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 130/302 (43%), Gaps = 5/302 (1%)
Query: 23 PQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFS 82
P I N I G V AR+LF MP+R+ SW +VI A+ G+ +E ++F
Sbjct: 92 PLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFR 151
Query: 83 EMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG 142
M +DG + E + VL +C + DL + +H G+ NV + +++D+Y KC
Sbjct: 152 RMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCR 211
Query: 143 CLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLH 202
+ + RVF+ + + VSW+ ++ + M+ + ++P T V+
Sbjct: 212 VMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVML 271
Query: 203 ACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR 262
ACS ++ G+ + I + +V + D+ + RLE AR V + + +
Sbjct: 272 ACSRSLALEVGKVIHAIAVK-LSVVADTVVSTSVFDMYVKCDRLESARRVF-DQTRSKDL 329
Query: 263 VVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLM 322
W + + G + L EA + N + M Y A +W+E LM
Sbjct: 330 KSWTSAMSGYAMSG---LTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLM 386
Query: 323 KS 324
+
Sbjct: 387 RQ 388
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 119/301 (39%), Gaps = 63/301 (20%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++ +Y C AR +FD++ +WN+++ + +G+ A +F M + NVR
Sbjct: 203 IVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVR-- 260
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
P TV +V++AC++ LE GK +H A
Sbjct: 261 -----------------------------PLNHTVSSVMLACSRSLALEVGKVIHAIAVK 291
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAM---------- 171
+ + V ++ DMYVKC LE RVF+ R + + SW+S + G+AM
Sbjct: 292 LSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREAREL 351
Query: 172 --------------------HXXXXXXXXXXXXMIRVGMKP-NYVTFIGVLHACSHVGLV 210
H ++R ++ + VT + +L+ CS + V
Sbjct: 352 FDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDV 411
Query: 211 DKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
G+ + R +G V L+D+ + G L+ A MS + V W ALL
Sbjct: 412 QMGKQAHGFIYR-HGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLT 470
Query: 271 G 271
G
Sbjct: 471 G 471
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 88/144 (61%), Gaps = 14/144 (9%)
Query: 330 TPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKM-------KGYIPDTSVVL 382
+P S + G E G++ K I + K VK+K GY+P+T VL
Sbjct: 103 SPSSHSTKVRGDKPEISGGEK-----KAIVDR-SKAYVKLKSLGKEVRDAGYVPETKYVL 156
Query: 383 LDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENR 442
D+ D + KE L HSE+LA+ +G+INT PG +IR+MKNLR+C DCH K++S IE+R
Sbjct: 157 HDI-DEEAKEKALMHHSERLAIAFGIINTPPGTTIRVMKNLRICGDCHNFIKILSSIEDR 215
Query: 443 EIVVRDRNRFHCFKDGACTCKDYW 466
EI+VRD RFH F+DG C+C DYW
Sbjct: 216 EIIVRDNKRFHHFRDGNCSCGDYW 239
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 134/271 (49%), Gaps = 9/271 (3%)
Query: 8 SCGETRHAR-------LMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS 60
+C E + R L+ +M + D+ ++ G + R +F M RN +
Sbjct: 293 ACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVT 352
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
WTS+I A+ G EEA+ +F M++ N +TVV++L AC +G L GK +H
Sbjct: 353 WTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQII 412
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
N +NVY+ + L+ +Y KCG + + V + + R VVSW++MI G +
Sbjct: 413 KNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALD 472
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
MI+ G++PN T+ L AC++ + GR++ +I ++++ + V L+ +
Sbjct: 473 FLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHAL-SNVFVGSALIHMY 531
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
++ G + EA V +M N V W A++ G
Sbjct: 532 AKCGFVSEAFRVFDSMP-EKNLVSWKAMIMG 561
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 92/169 (54%), Gaps = 3/169 (1%)
Query: 44 GAARDLFS---SMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G +RD F+ +P R+V SWT++I G + G EAL EM ++G +PN T + L
Sbjct: 434 GESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSAL 493
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
ACA L G+S+H AK N L NV+V +ALI MY KCG + E +RVF+ M E+ +V
Sbjct: 494 KACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLV 553
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGL 209
SW +MI+G+A + M G + + F +L C + L
Sbjct: 554 SWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIEL 602
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 121/273 (44%), Gaps = 37/273 (13%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L++ YA CGE A FD M ++D+ SW
Sbjct: 224 LVYFYAQCGELTSALRAFDMMEEKDVI-------------------------------SW 252
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
T+VI ++ G +A+ +F M PNE TV ++L AC++ L FG+ VH
Sbjct: 253 TAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVK 312
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+V+V +L+DMY KCG + + +VF+GM R V+W+S+I A
Sbjct: 313 RMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISL 372
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M R + N +T + +L AC VG + G+ L + ++ I V LV L
Sbjct: 373 FRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKN-SIEKNVYIGSTLVWLYC 431
Query: 242 RAGRLEEAREVIANMSVPPNR--VVWGALLGGC 272
+ G +A V+ + P+R V W A++ GC
Sbjct: 432 KCGESRDAFNVLQQL---PSRDVVSWTAMISGC 461
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 7/256 (2%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N +I+ + +G + AR +F SMP++N +WT++I G K G+ +EA +F + K G +
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 91 -PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYR 149
NE V +L C++ + E G+ VH G + N+ V ++L+ Y +CG L R
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG-VGNLIVESSLVYFYAQCGELTSALR 239
Query: 150 VFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGL 209
F+ M E+ V+SW+++I + M+ PN T +L ACS
Sbjct: 240 AFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKA 299
Query: 210 VDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALL 269
+ GR + +++ + I V L+D+ ++ G + + R+V MS N V W +++
Sbjct: 300 LRFGRQVHSLVVKRM-IKTDVFVGTSLMDMYAKCGEISDCRKVFDGMS-NRNTVTWTSII 357
Query: 270 GGCRLHKNIVLAEEAM 285
H EEA+
Sbjct: 358 AA---HAREGFGEEAI 370
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G+V A +F SMP++N+ SW ++I G A+ G C EALK+ ME +G + ++ +L
Sbjct: 535 GFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATIL 594
Query: 101 VACAQLGDLEFGKSVHRFA 119
C GD+E ++V A
Sbjct: 595 STC---GDIELDEAVESSA 610
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 100/204 (49%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGD 108
LF + QRNV++WT++I + ++VF M +P+ VT+ VL C+ L
Sbjct: 475 LFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKA 534
Query: 109 LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVG 168
L+ GK +H F +V +I MY KCG L F+ + + ++W+++I
Sbjct: 535 LKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEA 594
Query: 169 FAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVP 228
+ + M+ G PN TF VL CS G VD+ +M R Y + P
Sbjct: 595 YGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQP 654
Query: 229 GVEHYGCLVDLLSRAGRLEEAREV 252
EHY +++LL+R GR+EEA+ +
Sbjct: 655 SEEHYSLVIELLNRCGRVEEAQRL 678
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 144/286 (50%), Gaps = 9/286 (3%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + + R +F QRN SWT+++ G A G ++AL+ M+++G +P+ VT+ VL
Sbjct: 366 GDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVL 425
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
CA+L ++ GK +H +A N FL NV + +L+ MY KCG E R+F+ + +R V
Sbjct: 426 PVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVK 485
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT-I 219
+W++MI + + M+ +P+ VT VL CS + + G+ L I
Sbjct: 486 AWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHI 545
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLG--GC-RLHK 276
+++++ +P V ++ + + G L A ++V + W A++ GC L +
Sbjct: 546 LKKEFESIPFVS--ARIIKMYGKCGDLRSANFSFDAVAV-KGSLTWTAIIEAYGCNELFR 602
Query: 277 NIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLM 322
+ + E M +S+ N + + ++ ++AG +E R LM
Sbjct: 603 DAINCFEQM--VSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLM 646
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 114/244 (46%), Gaps = 32/244 (13%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y CG+ AR +FD++ +RDI W MIA L + N R W
Sbjct: 255 LVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAH-----------------NKRQW 297
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH-RFAK 120
++ GL + + EE K++ PN V + +L + L+ GK VH K
Sbjct: 298 EAL--GLFRTMISEE--KIY---------PNSVILTTILPVLGDVKALKLGKEVHAHVLK 344
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
++ +V + LID+Y KCG + G RVF G ++R +SW++++ G+A +
Sbjct: 345 SKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALR 404
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M + G +P+ VT VL C+ + + +G+ + ++ +P V L+ +
Sbjct: 405 SIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNL-FLPNVSLVTSLMVMY 463
Query: 241 SRAG 244
S+ G
Sbjct: 464 SKCG 467
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 104/236 (44%), Gaps = 8/236 (3%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGM--CEEALKVFSEMEKDGSKPNEVTVVA 98
G V A+ +F NV SW +++ G G ++ L F+EM + G N ++
Sbjct: 160 GSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSN 219
Query: 99 VLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERT 158
V + A L G H A NG +V++ +L+DMY KCG + RVF+ + ER
Sbjct: 220 VFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERD 279
Query: 159 VVSWSSMIVGFAMHXXXXXXXXXXXXMI-RVGMKPNYVTFIGVLHACSHVGLVDKGRALL 217
+V W +MI G A + MI + PN V +L V + G+ +
Sbjct: 280 IVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVH 339
Query: 218 T--IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ ++Y P V H G L+DL + G + R V S N + W AL+ G
Sbjct: 340 AHVLKSKNYVEQPFV-HSG-LIDLYCKCGDMASGRRVFYG-SKQRNAISWTALMSG 392
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 101/230 (43%), Gaps = 7/230 (3%)
Query: 47 RDLF-SSMP--QRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVAC 103
RD F SS+P +N I A+ E AL + +E+ G N T A+L AC
Sbjct: 62 RDAFPSSLPLHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEAC 121
Query: 104 AQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWS 163
+ L GK VH + NG N ++ L+ MY CG +++ +VF+ V SW+
Sbjct: 122 VRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWN 181
Query: 164 SMIVGFAMH--XXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMR 221
+++ G + M +G+ N + V + + + +G +
Sbjct: 182 ALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAI 241
Query: 222 RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
++ G+ V LVD+ + G++ AR V + V + VVWGA++ G
Sbjct: 242 KN-GLFNSVFLKTSLVDMYFKCGKVGLARRVFDEI-VERDIVVWGAMIAG 289
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 169/384 (44%), Gaps = 29/384 (7%)
Query: 10 GETRHARLMFDKMP----QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS----W 61
G A ++ D+M Q D T+ ++ L G A DLF M +RN+++ +
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+ VI L K G ++AL +F+EME G K + VT +++ G + G + R G
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV----VSWSSMIVGFAMHXXXXX 177
+ +V +ALID++VK G L E ++ M R + ++++S+I GF
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
M+ G +P+ VT+ ++++ VD G L + G++P Y LV
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK-GLIPNTITYNTLV 427
Query: 238 DLLSRAGRLEEAREVIANM---SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDL- 293
++G+L A+E+ M VPP+ V +G LL G + + A E + K +
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 294 LNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHP 353
L G Y ++ + A K ++ + + +GVK ++ I G+
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCK---------- 537
Query: 354 QAKGIFEMWEKLLVKMKMKGYIPD 377
KG + L KMK G PD
Sbjct: 538 --KGSLSEADMLFRKMKEDGCTPD 559
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 130/330 (39%), Gaps = 13/330 (3%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVR----SWTSVIYGLAKCGMCEEALK 79
+ D T++ ++ G V A L M + R + +++I GL G EAL
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 80 VFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYV 139
+ M + G +P+EVT VL + G+ + R + +V + +ID
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 140 KCGCLEEGYRVFEGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYV 195
K G ++ +F M + VV++SS+I G MI + P+ V
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316
Query: 196 TFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 255
TF ++ G + + + L M GI P Y L+D + L EA ++
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMIT-RGIAPDTITYNSLIDGFCKENCLHEANQMFDL 375
Query: 256 M---SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLL-NDGYYVVMSNVYAEAGK 311
M P+ V + L+ K + R +S L+ N Y + + ++GK
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 312 WEEVSRIRRLMKSRGVKKTPGCSSITIDGV 341
+ + M SRGV + I +DG+
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGL 465
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 160/357 (44%), Gaps = 19/357 (5%)
Query: 2 LLHLYASCGETRHARLMFDKM----PQRDIATWNIMIAHLINVGYVGAARDLFSSMPQR- 56
LLH +A G+T + F M + + T+NIMI + G V AAR LF M R
Sbjct: 233 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG 292
Query: 57 ---NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGK 113
+ ++ S+I G K G ++ + F EM+ +P+ +T A++ + G L G
Sbjct: 293 LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGL 352
Query: 114 SVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV----SWSSMIVGF 169
+R KGNG NV + L+D + K G +++ + + MR +V +++S+I
Sbjct: 353 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412
Query: 170 AMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPG 229
M++VG++ N VT+ ++ + + L M G++P
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDT-AGVIPN 471
Query: 230 VEHYGCLVDLLSRAGRLEEAREVIANMS---VPPNRVVWGALLGG-CRLHKNIVLAEEAM 285
+ Y L+ +A ++ A E++ + + P+ +++G + G C L K I A+ M
Sbjct: 472 LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEK-IEAAKVVM 530
Query: 286 RHLSKLDL-LNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGV 341
+ + + N Y + + Y ++G E + MK ++ T + IDG+
Sbjct: 531 NEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 587
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 139/314 (44%), Gaps = 13/314 (4%)
Query: 27 IATWNIMIAHLINVGYVGAARDLFSSMPQRNV----RSWTSVIYGLAKCGMCEEALKVFS 82
++ + + LI++G + A FS M + V RS +++ AK G ++ + F
Sbjct: 192 FGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFK 251
Query: 83 EMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG 142
+M G++P T ++ + GD+E + + K G + + N++ID + K G
Sbjct: 252 DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG 311
Query: 143 CLEEGYRVFEGMR----ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFI 198
L++ FE M+ E V++++++I F M G+KPN V++
Sbjct: 312 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYS 371
Query: 199 GVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV---IAN 255
++ A G++ + MRR G+VP Y L+D + G L +A + +
Sbjct: 372 TLVDAFCKEGMMQQAIKFYVDMRR-VGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 430
Query: 256 MSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLL-NDGYYVVMSNVYAEAGKWEE 314
+ V N V + AL+ G + + AEE + ++ N Y + + + +A +
Sbjct: 431 VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDR 490
Query: 315 VSRIRRLMKSRGVK 328
+ +K RG+K
Sbjct: 491 ALELLNELKGRGIK 504
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 174/388 (44%), Gaps = 37/388 (9%)
Query: 10 GETRHARLMFDKMP----QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVR----SW 61
G+ A ++ D+M Q D+ T+N ++ + G A DL M +RNV+ ++
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+++I L + G + A+ +F EME G K + VT +++ + G G + +
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER----TVVSWSSMIVGFAMHXXXXX 177
+ NV N L+D++VK G L+E +++ M R ++++++++ G+ M
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKG-RALLTIMRRDYGIVPGVEHYGCL 236
M+R P+ VTF ++ V VD G + I +R G+V Y L
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKR--GLVANAVTYSIL 409
Query: 237 VDLLSRAGRLEEAREVIANM---SVPPNRVVWGALLGGC----RLHKNIVLAEEAMRHLS 289
V ++G+++ A E+ M V P+ + +G LL G +L K + + E+ + S
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK--S 467
Query: 290 KLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGD 349
K+DL Y ++ + + GK E+ + + +GVK ++ I G+
Sbjct: 468 KMDLGIVMYTTIIEGM-CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK------ 520
Query: 350 ETHPQAKGIFEMWEKLLVKMKMKGYIPD 377
KG LL KM+ G P+
Sbjct: 521 ------KGSLSEANILLRKMEEDGNAPN 542
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 148/357 (41%), Gaps = 20/357 (5%)
Query: 4 HLYASCGETRHARLMFDKMPQ-------RDIATWNIMIAHLINVGYVGAARDLFSSMP-- 54
+++ T+ L+ D Q +I T NIMI A + +
Sbjct: 93 RFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKL 152
Query: 55 --QRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG 112
+ + ++ ++I GL G EA+ + M ++G +P+ VT +++ + GD
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 113 KSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER----TVVSWSSMIVG 168
+ R + +V+ + +ID + GC++ +F+ M + +VV+++S++ G
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 169 FAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVP 228
M+ + PN +TF +L G + + L M GI P
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT-RGISP 331
Query: 229 GVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
+ Y L+D RL EA ++ M P+ V + +L+ G + K + +
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391
Query: 286 RHLSKLDLL-NDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGV 341
R++SK L+ N Y ++ + ++GK + + + M S GV I +DG+
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 114/268 (42%), Gaps = 13/268 (4%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMPQR 56
+LL ++ G+ + A ++ +M R +I T+N ++ + A ++ M +
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Query: 57 ----NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG 112
++ ++TS+I G ++ +KVF + K G N VT ++ Q G ++
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 113 KSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERT----VVSWSSMIVG 168
+ + + +G L +V L+D G LE+ +FE +++ +V ++++I G
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482
Query: 169 FAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVP 228
+ G+KPN +T+ ++ G + + LL M D G P
Sbjct: 483 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED-GNAP 541
Query: 229 GVEHYGCLVDLLSRAGRLEEAREVIANM 256
Y L+ R G L + ++I M
Sbjct: 542 NDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 129/318 (40%), Gaps = 25/318 (7%)
Query: 38 INVGYVGAARDLFSSMPQRNV---RSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEV 94
I+ + RD FSS+ NV S I + K ++A+ +F EM + P+ V
Sbjct: 35 ISSFFSSCERD-FSSISNGNVCFRERLRSGIVDIKK----DDAIALFQEMIRSRPLPSLV 89
Query: 95 TVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM 154
A A+ + + NG N+Y N +I+ + +C Y V +
Sbjct: 90 DFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKV 149
Query: 155 R----ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
E +++++I G + M+ G +P+ VT+ +++ G
Sbjct: 150 MKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDT 209
Query: 211 DKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS---VPPNRVVWGA 267
LL M + + V Y ++D L R G ++ A + M + + V + +
Sbjct: 210 SLALDLLRKM-EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNS 268
Query: 268 LLGG-CRLHK----NIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLM 322
L+ G C+ K ++L + R + + N + V+ +V+ + GK +E + + + M
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREI----VPNVITFNVLLDVFVKEGKLQEANELYKEM 324
Query: 323 KSRGVKKTPGCSSITIDG 340
+RG+ + +DG
Sbjct: 325 ITRGISPNIITYNTLMDG 342
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Query: 27 IATWNIMIAHLINVGYVGAARDLFSSMP----QRNVRSWTSVIYGLAKCGMCEEALKVFS 82
I + +I + G V A +LF S+P + NV ++T +I GL K G EA +
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
Query: 83 EMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYV 139
+ME+DG+ PN+ T ++ A + GDL + K GF + +IDM +
Sbjct: 533 KMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 75/163 (46%), Gaps = 8/163 (4%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMPQR 56
+L+ + G+ + A +F +M D+ T+ I++ L + G + A ++F + +
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467
Query: 57 N----VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG 112
+ +T++I G+ K G E+A +F + G KPN +T ++ + G L
Sbjct: 468 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527
Query: 113 KSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR 155
+ R + +G N N LI +++ G L ++ E M+
Sbjct: 528 NILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 174/397 (43%), Gaps = 40/397 (10%)
Query: 1 MLLHLYASCGETRHARLMFDKMP----QRDIATWNIMIAHLINVGYVGAARDLFSSMPQR 56
+ LH AS A + D+M Q D+ T+ +++ L G A +L + M Q
Sbjct: 196 LFLHNKAS-----EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG 250
Query: 57 NVRS----WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG 112
+ + ++I GL K ++AL +F EME G +PN VT +++ G
Sbjct: 251 KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA 310
Query: 113 KSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER----TVVSWSSMIVG 168
+ +V+ +ALID +VK G L E ++++ M +R ++V++SS+I G
Sbjct: 311 SRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 370
Query: 169 FAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVP 228
F MH M+ P+ VT+ ++ V++G + M + G+V
Sbjct: 371 FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ-RGLVG 429
Query: 229 GVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNRVVWGALLGGC----RLHKNIVLA 281
Y L+ L +AG + A+E+ M VPPN + + LL G +L K +V+
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489
Query: 282 EEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGV 341
E R SK++ Y +++ + +AGK E+ + + +GVK + I G
Sbjct: 490 EYLQR--SKMEPTIYTYNIMIEGM-CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 546
Query: 342 VHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDT 378
KG E + L +MK G +P++
Sbjct: 547 CR------------KGSKEEADALFKEMKEDGTLPNS 571
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 14/248 (5%)
Query: 14 HARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMPQR----NVRSWTSVI 65
A+ MF+ M + D+ T+N +I V ++F M QR N ++ +I
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 66 YGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL 125
GL + G C+ A ++F EM DG PN +T +L + G LE V + + +
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 126 RNVYVCNALIDMYVKCGCLEEGYRVFEGMRER----TVVSWSSMIVGFAMHXXXXXXXXX 181
+Y N +I+ K G +E+G+ +F + + VV++++MI GF
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M G PN + ++ A G + L+ M R G G + ++L
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM-RSCGFAGDASTIGLVTNML- 616
Query: 242 RAGRLEEA 249
GRL+++
Sbjct: 617 HDGRLDKS 624
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 148/368 (40%), Gaps = 36/368 (9%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
V +F + Q N ++ ++I+GL EA+ + M G +P+ VT V+
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG 230
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER----T 158
+ GD + ++ + V + N +ID K +++ +F+ M +
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290
Query: 159 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVG-LVDKGRALL 217
VV++SS+I + MI + P+ TF ++ A G LV+ +
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350
Query: 218 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVP---PNRVVWGALLGGCRL 274
+++R I P + Y L++ RL+EA+++ M P+ V + L+ G
Sbjct: 351 EMVKR--SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408
Query: 275 HKNIVLAEEAMRHLSKLDLL-NDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGC 333
+K + E R +S+ L+ N Y ++ +AG + I + M S GV
Sbjct: 409 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468
Query: 334 SSITIDG-----------VVHEFVAGDETHP-------------QAKGIFEMWEKLLVKM 369
+ +DG VV E++ + P +A + + W+ L +
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD-LFCNL 527
Query: 370 KMKGYIPD 377
+KG PD
Sbjct: 528 SLKGVKPD 535
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 138/309 (44%), Gaps = 26/309 (8%)
Query: 2 LLHLYASC----GETRHARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSM 53
LL+ Y C GE R MF+++ R D +++I+I LI G+ +LF SM
Sbjct: 519 LLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSM 578
Query: 54 PQR----NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDL 109
++ + R++ VI G KCG +A ++ EM+ G +P VT +V+ A++ L
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 638
Query: 110 EFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER----TVVSWSSM 165
+ + AK NV + ++LID + K G ++E Y + E + ++ + +W+S+
Sbjct: 639 DEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSL 698
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
+ M + PN VT+ +++ V +K M++ G
Sbjct: 699 LDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ-G 757
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVI----ANMSVPP----NRVVWGALLGGCRLHKN 277
+ P Y ++ L++AG + EA + AN VP N ++ G L G R
Sbjct: 758 MKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG-LSNGNRAMDA 816
Query: 278 IVLAEEAMR 286
L EE R
Sbjct: 817 FSLFEETRR 825
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 151/383 (39%), Gaps = 66/383 (17%)
Query: 18 MFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQR----NVRSWTSVIYGLAKCGM 73
M ++ D+ N + + G R +F + R + RS++ +I+GL K G
Sbjct: 508 MINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGF 567
Query: 74 CEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNA 133
E ++F M K G + + N
Sbjct: 568 ANETYELFYSM-----------------------------------KEQGCVLDTRAYNI 592
Query: 134 LIDMYVKCGCLEEGYRVFEGMR----ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
+ID + KCG + + Y++ E M+ E TVV++ S+I G A
Sbjct: 593 VIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKR 652
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLT-IMRRDYGIVPGVEHYGCLVDLLSRAGRLEE 248
++ N V + ++ VG +D+ +L +M++ G+ P + + L+D L +A + E
Sbjct: 653 IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK--GLTPNLYTWNSLLDALVKAEEINE 710
Query: 249 AR---EVIANMSVPPNRVVWGALLGGC----RLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
A + + + PN+V +G L+ G + +K V +E + K ++ Y
Sbjct: 711 ALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTIS---YTT 767
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
M + A+AG E + K+ G C + I+G+ + A D A +FE
Sbjct: 768 MISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMD-----AFSLFEE 822
Query: 362 WEKLLVKMKMKGYIPDTSVVLLD 384
+ + + K T VVLLD
Sbjct: 823 TRRRGLPIHNK-----TCVVLLD 840
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 118/276 (42%), Gaps = 16/276 (5%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQR----NVRSWTSVIYGLAKCGMCEEALKVF 81
++ T NIM+ L + A +F M + + ++ S+I GL K G ++A KV+
Sbjct: 411 NVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 470
Query: 82 SEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKC 141
+M + N + +++ G E G +++ ++ + N +D K
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKA 530
Query: 142 GCLEEGYRVFEGMRERTVV----SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTF 197
G E+G +FE ++ R V S+S +I G M G + +
Sbjct: 531 GEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590
Query: 198 IGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAR---EVIA 254
V+ G V+K LL M+ G P V YG ++D L++ RL+EA E
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTK-GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 649
Query: 255 NMSVPPNRVVWGALLGGC----RLHKNIVLAEEAMR 286
+ + N V++ +L+ G R+ + ++ EE M+
Sbjct: 650 SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQ 685
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 99/239 (41%), Gaps = 10/239 (4%)
Query: 27 IATWNIMIAHLINVGYVGAARDLFSSMPQ----RNVRSWTSVIYGLAKCGMCEEALKVFS 82
+ + +I V + LF M + V +T++I G AK G + AL +
Sbjct: 168 FSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLD 227
Query: 83 EMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG 142
EM+ + V + + ++G ++ + NG + ++I + K
Sbjct: 228 EMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKAN 287
Query: 143 CLEEGYRVFEGMRERTVV----SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFI 198
L+E +FE + + V ++++MI+G+ G P+ + +
Sbjct: 288 RLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYN 347
Query: 199 GVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS 257
+L +G VD+ + M++D P + Y L+D+L RAG+L+ A E+ +M
Sbjct: 348 CILTCLRKMGKVDEALKVFEEMKKD--AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQ 404
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 133/335 (39%), Gaps = 34/335 (10%)
Query: 30 WNIMIAHLINVGYVGAARDLFS------SMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+N MI + G A L S+P +V ++ ++ L K G +EALKVF E
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGSIP--SVIAYNCILTCLRKMGKVDEALKVFEE 368
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M+KD + PN T ++ + G L+ + + G NV N ++D K
Sbjct: 369 MKKDAA-PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQK 427
Query: 144 LEEGYRVFEGMRERTV----VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIG 199
L+E +FE M + +++ S+I G M+ + N + +
Sbjct: 428 LDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTS 487
Query: 200 VLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAR----EVIAN 255
++ + G + G + M + P ++ +D + +AG E+ R E+ A
Sbjct: 488 LIKNFFNHGRKEDGHKIYKDMI-NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR 546
Query: 256 MSVPPNR----VVWGALLGGCRLHKNIVLAEEAMRHLSKLD----LLNDGYYVVMSNVYA 307
VP R ++ G + G A E + +L+ Y ++ + +
Sbjct: 547 RFVPDARSYSILIHGLIKAG--------FANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598
Query: 308 EAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVV 342
+ GK + ++ MK++G + T IDG+
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 178/400 (44%), Gaps = 46/400 (11%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMP-- 54
+ LH AS A + D+M QR ++ T+ +++ L G + A +L + M
Sbjct: 200 LFLHNKAS-----EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 254
Query: 55 --QRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG 112
+ NV +++VI L K ++AL +F+EME G +PN +T + L++C L + E
Sbjct: 255 KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT-YSSLISC--LCNYERW 311
Query: 113 KSVHRFAKG---NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERT----VVSWSSM 165
R NV NALID +VK G L E ++++ M +R+ + ++SS+
Sbjct: 312 SDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 371
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
I GF MH MI PN VT+ +++ +D+G L M + G
Sbjct: 372 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ-RG 430
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNRVVWGALLGGC----RLHKNI 278
+V Y L+ +A + A+ V M V PN + + LL G +L K +
Sbjct: 431 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 490
Query: 279 VLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITI 338
V+ E R SK++ Y +++ + +AGK E+ + + +GVK + I
Sbjct: 491 VVFEYLQR--SKMEPTIYTYNIMIEGM-CKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547
Query: 339 DGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDT 378
G KG+ E + L KM+ G +PD+
Sbjct: 548 SGFCR------------KGLKEEADALFRKMREDGPLPDS 575
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 146/354 (41%), Gaps = 36/354 (10%)
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
++T++I+GL EA+ + M + G +PN VT V+ + GD++ ++
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 251
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER----TVVSWSSMIVGFAMHXXX 175
+ NV + + +ID K ++ +F M + V+++SS+I +
Sbjct: 252 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERW 311
Query: 176 XXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVG-LVDKGRALLTIMRRDYGIVPGVEHYG 234
MI + PN VTF ++ A G LV+ + +++R I P + Y
Sbjct: 312 SDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR--SIDPDIFTYS 369
Query: 235 CLVDLLSRAGRLEEAR---EVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL 291
L++ RL+EA+ E++ + PN V + L+ G K I E R +S+
Sbjct: 370 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR 429
Query: 292 DLL-NDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDG---------- 340
L+ N Y + + + +A + + + M S GV + +DG
Sbjct: 430 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 489
Query: 341 -VVHEFVAGDETHP-------------QAKGIFEMWEKLLVKMKMKGYIPDTSV 380
VV E++ + P +A + + W+ L + +KG PD +
Sbjct: 490 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD-LFCSLSLKGVKPDVII 542
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 155/368 (42%), Gaps = 34/368 (9%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS----WTSVIYGLAKCGMCEEALK 79
+ D+ T + +I V A DL S M + R + ++I G K G+ +A++
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVE 195
Query: 80 VFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYV 139
+F ME+DG + + VT +++ G + R + NV A+ID++V
Sbjct: 196 LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFV 255
Query: 140 KCGCLEEGYRVFEGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYV 195
K G E +++E M R V +++S+I G MH M+ G P+ V
Sbjct: 256 KEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVV 315
Query: 196 TFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 255
T+ +++ VD+G L M + G+V Y ++ +AGR + A+E+ +
Sbjct: 316 TYNTLINGFCKSKRVDEGTKLFREMAQ-RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR 374
Query: 256 MSVPPNRVVWGALLGGC----RLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGK 311
M PN + LL G R+ K +VL E + +LD+ Y ++ + + G
Sbjct: 375 MDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITT---YNIVIHGMCKIGN 431
Query: 312 WEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEK---LLVK 368
E+ + R + +G+K + I G + W+K L K
Sbjct: 432 VEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK---------------RQWDKSDLLYRK 476
Query: 369 MKMKGYIP 376
M+ G +P
Sbjct: 477 MQEDGLLP 484
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 120/282 (42%), Gaps = 9/282 (3%)
Query: 57 NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH 116
++ S+ VI L +C AL V +M K G +P+ VTV +++ Q + +
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 117 RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV----VSWSSMIVGFAMH 172
+ GF +V + N +ID K G + + +F+ M V V+++S++ G
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 173 XXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEH 232
M+ + PN +TF V+ G + L M R + P V
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTR-RCVDPDVFT 281
Query: 233 YGCLVDLLSRAGRLEEAREVIANMSVP---PNRVVWGALLGGCRLHKNIVLAEEAMRHLS 289
Y L++ L GR++EA++++ M P+ V + L+ G K + + R ++
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 341
Query: 290 KLDLLNDGY-YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKT 330
+ L+ D Y + Y +AG+ + I M SR +T
Sbjct: 342 QRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRT 383
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 114/295 (38%), Gaps = 42/295 (14%)
Query: 75 EEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNAL 134
EE + +F +M + P+ V VL A+ + + S+ + G ++Y N +
Sbjct: 51 EEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110
Query: 135 IDMYVKCGCLEEGYRVFEGMR----ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGM 190
I+ +C V M E VV+ SS+I GF M +G
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF 170
Query: 191 KPNYVTFIGVLHACSHVGLVDKGRALLTIMRRD--------------------------- 223
+P+ V + ++ +GLV+ L M RD
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 230
Query: 224 -------YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS---VPPNRVVWGALLGGCR 273
IVP V + ++D+ + G+ EA ++ M+ V P+ + +L+ G
Sbjct: 231 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLC 290
Query: 274 LHKNIVLAEEAMRHLSKLDLLNDGY-YVVMSNVYAEAGKWEEVSRIRRLMKSRGV 327
+H + A++ + + L D Y + N + ++ + +E +++ R M RG+
Sbjct: 291 MHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 5/144 (3%)
Query: 18 MFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMPQR-NVRSWTSVIYGLAKCG 72
+F +M QR D T+N +I G AA+++FS M R N+R+++ ++YGL
Sbjct: 336 LFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNW 395
Query: 73 MCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCN 132
E+AL +F M+K + + T V+ ++G++E + R G +V
Sbjct: 396 RVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYT 455
Query: 133 ALIDMYVKCGCLEEGYRVFEGMRE 156
+I + + ++ ++ M+E
Sbjct: 456 TMISGFCRKRQWDKSDLLYRKMQE 479
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 158/371 (42%), Gaps = 33/371 (8%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS----WTSVIYGLAKCGMCEEALK 79
Q D+ T+ +I L G A +L + M + + + +++VI L K ++AL
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALN 261
Query: 80 VFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYV 139
+F+EM+ G +P+ T +++ G + NV N+LID +
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
Query: 140 KCGCLEEGYRVFEGMRERTV----VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYV 195
K G L E ++F+ M +R++ V+++S+I GF MH M+ P+ V
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 381
Query: 196 TFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 255
T+ +++ V G L M R G+V Y L+ +A + A+ V
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSR-RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440
Query: 256 M---SVPPNRVVWGALLGGC----RLHKNIVLAEEAMRHLSKLDLLNDGY-YVVMSNVYA 307
M V PN + + LL G +L K +V+ E +L K + D Y Y +MS
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE----YLQKSKMEPDIYTYNIMSEGMC 496
Query: 308 EAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLV 367
+AGK E+ + + +GVK + I G KG+ E L +
Sbjct: 497 KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCK------------KGLKEEAYTLFI 544
Query: 368 KMKMKGYIPDT 378
KMK G +PD+
Sbjct: 545 KMKEDGPLPDS 555
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 121/265 (45%), Gaps = 12/265 (4%)
Query: 18 MFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQR----NVRSWTSVIYGLAKCGM 73
M +K + D+ T++ +I+ L N G A L S M +R NV ++ S+I AK G
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Query: 74 CEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNA 133
EA K+F EM + PN VT +++ L+ + + L +V N
Sbjct: 326 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNT 385
Query: 134 LIDMYVKCGCLEEGYRVFEGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
LI+ + K + +G +F M R V+++++I GF M+ G
Sbjct: 386 LINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG 445
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
+ PN +T+ +L G ++K + +++ + P + Y + + + +AG++E+
Sbjct: 446 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS-KMEPDIYTYNIMSEGMCKAGKVEDG 504
Query: 250 REVIANMS---VPPNRVVWGALLGG 271
++ ++S V P+ + + ++ G
Sbjct: 505 WDLFCSLSLKGVKPDVIAYNTMISG 529
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 12/242 (4%)
Query: 17 LMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQR----NVRSWTSVIYGLAKCG 72
LM K D+ T+N +I V +LF M +R N ++T++I+G +
Sbjct: 370 LMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQAS 429
Query: 73 MCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCN 132
C+ A VF +M DG PN +T +L + G LE V + + + ++Y N
Sbjct: 430 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYN 489
Query: 133 ALIDMYVKCGCLEEGYRVFEGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRV 188
+ + K G +E+G+ +F + + V+++++MI GF M
Sbjct: 490 IMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549
Query: 189 GMKPNYVTFIGVLHACSHVGLVDK-GRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLE 247
G P+ T+ ++ A H+ DK A L R YG + D+L GRL+
Sbjct: 550 GPLPDSGTYNTLIRA--HLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML-HDGRLD 606
Query: 248 EA 249
+
Sbjct: 607 KG 608
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 114/267 (42%), Gaps = 13/267 (4%)
Query: 2 LLHLYASCGETRHARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMPQR- 56
L+ +A G+ A +FD+M QR +I T+N +I + A+ +F+ M +
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Query: 57 ---NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGK 113
+V ++ ++I G K + +++F +M + G N VT ++ Q D + +
Sbjct: 376 CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQ 435
Query: 114 SVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR----ERTVVSWSSMIVGF 169
V + +G N+ N L+D K G LE+ VFE ++ E + +++ M G
Sbjct: 436 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGM 495
Query: 170 AMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPG 229
+ G+KP+ + + ++ GL ++ L M+ D G +P
Sbjct: 496 CKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED-GPLPD 554
Query: 230 VEHYGCLVDLLSRAGRLEEAREVIANM 256
Y L+ R G + E+I M
Sbjct: 555 SGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 116/283 (40%), Gaps = 19/283 (6%)
Query: 75 EEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNAL 134
+EA+ +F EM K P+ V +L A A++ + S + G N+Y N +
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 135 IDMYVKCGCLEEGYRVFEGMRE----RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGM 190
I+ + L + M + ++V+ +S++ GF M+ +G
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 191 KPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAR 250
+P+ VTF ++H + AL+ M G P + YG +++ L + G + A
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVK-GCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 251 EVIANMS---VPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG------YYVV 301
++ M + + V++ ++ ++++ ++A+ +++D N G Y
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHV---DDALNLFTEMD--NKGIRPDVFTYSS 280
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHE 344
+ + G+W + SR+ M R + + ID E
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKE 323
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 190/450 (42%), Gaps = 59/450 (13%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQ----RNVRSWTSVIYGLAKCGMCEEALKVF 81
D +T++ ++ +L N + A LF M + +V ++T ++ K G+ E+A K F
Sbjct: 482 DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWF 541
Query: 82 SEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKC 141
+EM + G PN VT A++ A + + + + G L N+ +ALID + K
Sbjct: 542 NEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKA 601
Query: 142 GCLEEGYRVFEGM-------------------RER-TVVSWSSMIVGFAMHXXXXXXXXX 181
G +E+ ++FE M ER VV++ +++ GF
Sbjct: 602 GQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKL 661
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M G +PN + + ++ VG +D+ + + T M ++G + Y L+D
Sbjct: 662 LDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM-SEHGFPATLYTYSSLIDRYF 720
Query: 242 RAGRLEEAREVIANM---SVPPNRVVWGALLGG-CRLHKNIVLAEEAMRHLSKLD----L 293
+ R + A +V++ M S PN V++ ++ G C++ K +EA + + ++
Sbjct: 721 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGK----TDEAYKLMQMMEEKGCQ 776
Query: 294 LNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHP 353
N Y M + + GK E + M S+GV + ID H
Sbjct: 777 PNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID------------HC 824
Query: 354 QAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALV--YGLINT 411
G ++ LL +MK + T+ +E ++ I E L L+ G +T
Sbjct: 825 CKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFI------ESLGLLDEIGQDDT 878
Query: 412 KPGMSIR--IMKNLRVCEDCHAAFKLVSEI 439
P +S+ ++ NL + A +L+ E+
Sbjct: 879 APFLSVYRLLIDNLIKAQRLEMALRLLEEV 908
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 130/315 (41%), Gaps = 43/315 (13%)
Query: 2 LLHLYASCGETRHARLMFDKMPQ----RDIATWNIMIAHL------INVGYVGAARDLFS 51
L+H Y + G+ +A + KM + +NI+I + +N + A +S
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYS 437
Query: 52 SM-------PQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACA 104
M + NV S+T L G E+A V EM G P+ T VL
Sbjct: 438 EMLAAGVVLNKINVSSFTRC---LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494
Query: 105 QLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRE----RTVV 160
+E + K G + +VY ++D + K G +E+ + F MRE VV
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 554
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
+++++I + M+ G PN VT+ ++ G V+K + M
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Query: 221 ---------------RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSV---PPNR 262
D P V YG L+D ++ R+EEAR+++ MS+ PN+
Sbjct: 615 CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQ 674
Query: 263 VVWGALLGG-CRLHK 276
+V+ AL+ G C++ K
Sbjct: 675 IVYDALIDGLCKVGK 689
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 128/352 (36%), Gaps = 95/352 (26%)
Query: 2 LLHLYASCGETRHARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSM---- 53
L+H Y + +A +F+ M +I T++ +I G V A +F M
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Query: 54 ----------------PQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVV 97
+ NV ++ +++ G K EEA K+ M +G +PN++
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678
Query: 98 AVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKC---------------- 141
A++ ++G L+ + V +GF +Y ++LID Y K
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN 738
Query: 142 -------------------GCLEEGYRVFEGMRER----TVVSWSSMIVGFAMHXXXXXX 178
G +E Y++ + M E+ VV++++MI GF M
Sbjct: 739 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETC 798
Query: 179 XXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDY-------------- 224
M G+ PNYVT+ ++ C G +D LL M++ +
Sbjct: 799 LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEG 858
Query: 225 ------------------GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSV 258
P + Y L+D L +A RLE A ++ ++
Sbjct: 859 FNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 910
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 165/394 (41%), Gaps = 34/394 (8%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMPQR 56
+ LH AS A + D+M QR ++ T+ +++ L G A +L + M
Sbjct: 200 LFLHNKAS-----EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAA 254
Query: 57 NVRS----WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG 112
+ + + ++I L K ++AL +F EME G +PN VT +++ G
Sbjct: 255 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 314
Query: 113 KSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERT----VVSWSSMIVG 168
+ N+ NALID +VK G E ++++ M +R+ + +++S++ G
Sbjct: 315 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNG 374
Query: 169 FAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVP 228
F MH M+ P+ VT+ ++ V+ G L M G+V
Sbjct: 375 FCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSH-RGLVG 433
Query: 229 GVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
Y L+ L G + A++V M VPP+ + + LL G + + A E
Sbjct: 434 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 493
Query: 286 RHLSKLDLLNDGY-YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHE 344
++ K ++ D Y Y M +AGK ++ + + +GVK + I G+
Sbjct: 494 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC-- 551
Query: 345 FVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDT 378
+K + + LL KMK G +P++
Sbjct: 552 ----------SKRLLQEAYALLKKMKEDGPLPNS 575
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 141/325 (43%), Gaps = 18/325 (5%)
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
++T++I+GL EA+ + M + G +PN VT V+ + GD + ++
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 251
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER----TVVSWSSMIVGFAMHXXX 175
+ +V + N +ID K +++ +F+ M + VV++SS+I +
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 311
Query: 176 XXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVG-LVDKGRALLTIMRRDYGIVPGVEHYG 234
MI + PN VTF ++ A G V+ + +++R I P + Y
Sbjct: 312 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR--SIDPDIFTYN 369
Query: 235 CLVDLLSRAGRLEEAREVIANM---SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL 291
LV+ RL++A+++ M P+ V + L+ G K + E R +S
Sbjct: 370 SLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR 429
Query: 292 DLLND--GYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGD 349
L+ D Y ++ ++ + G + ++ + M S GV SI +DG+ + +
Sbjct: 430 GLVGDTVTYTTLIQGLFHD-GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN-----N 483
Query: 350 ETHPQAKGIFEMWEKLLVKMKMKGY 374
+A +F+ +K +K+ + Y
Sbjct: 484 GKLEKALEVFDYMQKSEIKLDIYIY 508
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 103/250 (41%), Gaps = 40/250 (16%)
Query: 15 ARLMFDKMPQRD----IATWNIMIAHLINVGYVGAARDLFSSMPQR----NVRSWTSVIY 66
A+ MF+ M +D + T+N +I V +LF M R + ++T++I
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 67 GLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLR 126
GL G C+ A KVF +M DG P+ +T +L G LE V + + +
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Query: 127 NVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI 186
++Y+ +I+ K G +++G+ +F + +
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK----------------------------- 534
Query: 187 RVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRL 246
G+KPN VT+ ++ L+ + ALL M+ D G +P Y L+ R G
Sbjct: 535 --GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED-GPLPNSGTYNTLIRAHLRDGDK 591
Query: 247 EEAREVIANM 256
+ E+I M
Sbjct: 592 AASAELIREM 601
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 164/394 (41%), Gaps = 34/394 (8%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMPQR 56
+ LH AS A + D+M QR ++ T+ +++ L G + A +L + M
Sbjct: 125 LFLHNKAS-----EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 57 NVRS----WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG 112
+ + + ++I L K ++AL +F EME G +PN VT +++ G
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 239
Query: 113 KSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERT----VVSWSSMIVG 168
+ N+ NALID +VK G E ++ + M +R+ + +++S+I G
Sbjct: 240 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 299
Query: 169 FAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVP 228
F MH M+ P+ T+ ++ V+ G L M G+V
Sbjct: 300 FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH-RGLVG 358
Query: 229 GVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
Y L+ L G + A++V M VPP+ + + LL G + + A E
Sbjct: 359 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 418
Query: 286 RHLSKLDLLNDGY-YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHE 344
++ K ++ D Y Y M +AGK ++ + + +GVK + I G+
Sbjct: 419 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC-- 476
Query: 345 FVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDT 378
+K + + LL KMK G +PD+
Sbjct: 477 ----------SKRLLQEAYALLKKMKEDGPLPDS 500
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 141/325 (43%), Gaps = 18/325 (5%)
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
++T++I+GL EA+ + M + G +PN VT V+ + GD++ ++
Sbjct: 117 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER----TVVSWSSMIVGFAMHXXX 175
+ +V + N +ID K +++ +F+ M + VV++SS+I +
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236
Query: 176 XXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVG-LVDKGRALLTIMRRDYGIVPGVEHYG 234
MI + PN VTF ++ A G V+ + +++R I P + Y
Sbjct: 237 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR--SIDPDIFTYN 294
Query: 235 CLVDLLSRAGRLEEAREVIANMSVP---PNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL 291
L++ RL++A+++ M P+ + L+ G K + E R +S
Sbjct: 295 SLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR 354
Query: 292 DLLND--GYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGD 349
L+ D Y ++ ++ + G + ++ + M S GV SI +DG+ + +
Sbjct: 355 GLVGDTVTYTTLIQGLFHD-GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN-----N 408
Query: 350 ETHPQAKGIFEMWEKLLVKMKMKGY 374
+A +F+ +K +K+ + Y
Sbjct: 409 GKLEKALEVFDYMQKSEIKLDIYIY 433
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 103/250 (41%), Gaps = 40/250 (16%)
Query: 15 ARLMFDKMPQRD----IATWNIMIAHLINVGYVGAARDLFSSMPQR----NVRSWTSVIY 66
A+ MF+ M +D + T+N +I V +LF M R + ++T++I
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 67 GLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLR 126
GL G C+ A KVF +M DG P+ +T +L G LE V + + +
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428
Query: 127 NVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI 186
++Y+ +I+ K G +++G+ +F + +
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK----------------------------- 459
Query: 187 RVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRL 246
G+KPN VT+ ++ L+ + ALL M+ D G +P Y L+ R G
Sbjct: 460 --GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED-GPLPDSGTYNTLIRAHLRDGDK 516
Query: 247 EEAREVIANM 256
+ E+I M
Sbjct: 517 AASAELIREM 526
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 162/386 (41%), Gaps = 29/386 (7%)
Query: 7 ASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMP----QRNVRSWT 62
ASC + +L F+ D+ T+ ++ + + A LF + + NV ++T
Sbjct: 137 ASCFLGKMMKLGFEP----DLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYT 192
Query: 63 SVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGN 122
++I L K A+++F++M +GS+PN VT A++ ++G + R
Sbjct: 193 TLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKR 252
Query: 123 GFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERT----VVSWSSMIVGFAMHXXXXXX 178
NV ALID +VK G L E ++ M + + V ++ S+I G M+
Sbjct: 253 RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEA 312
Query: 179 XXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVD 238
M R G PN V + ++H V+ G + M + G+V Y L+
Sbjct: 313 RQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK-GVVANTITYTVLIQ 371
Query: 239 LLSRAGRLEEAREVIANMS---VPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDL-L 294
GR + A+EV MS PP+ + LL G + + A ++ K ++ +
Sbjct: 372 GYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDI 431
Query: 295 NDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQ 354
N Y ++ + GK E+ + + S+G+K + I G
Sbjct: 432 NIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR----------- 480
Query: 355 AKGIFEMWEKLLVKMKMKGYIPDTSV 380
+G+ + L KMK G++P+ SV
Sbjct: 481 -RGLIHEADSLFKKMKEDGFLPNESV 505
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMPQR 56
+L+ Y G A+ +F++M R DI T+N+++ L G V A +F M +R
Sbjct: 368 VLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR 427
Query: 57 ----NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG 112
N+ ++T +I G+ K G E+A +F + G KPN +T ++ + G +
Sbjct: 428 EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEA 487
Query: 113 KSVHRFAKGNGFLRN 127
S+ + K +GFL N
Sbjct: 488 DSLFKKMKEDGFLPN 502
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 145/321 (45%), Gaps = 20/321 (6%)
Query: 29 TWNIMIAHLINVGYVGAARDLFSSMPQRNVR----SWTSVIYGLAKCGMCEEALKVFSEM 84
T+N ++ L++ +V +A +F M ++ ++ ++I G K G ++A++ +M
Sbjct: 224 TYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDM 283
Query: 85 EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGN--GFLRNVYVCNALIDMYVKCG 142
E G + +++T + ++ AC D +FG V + + + G + + +I K G
Sbjct: 284 ETRGHEADKITYMTMIQAC--YADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEG 341
Query: 143 CLEEGYRVFEGM----RERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFI 198
L EGY VFE M + V ++ +I G+A MI G KP+ VT+
Sbjct: 342 KLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYS 401
Query: 199 GVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS- 257
V++ G V++ R D G+ Y L+D L +AGR++EA + MS
Sbjct: 402 VVVNGLCKNGRVEEALDYFHTCRFD-GLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSE 460
Query: 258 --VPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSK---LDLLNDGYYVVMSNVYAEAGKW 312
+ + AL+ H+ + A + + + D Y +++S ++ E +
Sbjct: 461 KGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEH-RN 519
Query: 313 EEVSRIRRLMKSRGVKKTPGC 333
EE ++ +M +G+ T C
Sbjct: 520 EEALKLWDMMIDKGITPTAAC 540
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 139/343 (40%), Gaps = 18/343 (5%)
Query: 6 YASCGETRHARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVR-- 59
Y G+T+ A M R D T+ MI G+ L+ M ++ ++
Sbjct: 267 YCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVP 326
Query: 60 --SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG-KSVH 116
+++ VI GL K G E VF M + GSKPN ++ A+ G +E + +H
Sbjct: 327 PHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLH 386
Query: 117 RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV----VSWSSMIVGFAMH 172
R GF +V + +++ K G +EE F R + + +SS+I G
Sbjct: 387 RMID-EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKA 445
Query: 173 XXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEH 232
M G + + ++ A + VD+ AL M + G V
Sbjct: 446 GRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYT 505
Query: 233 YGCLVDLLSRAGRLEEAR---EVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLS 289
Y L+ + + R EEA +++ + + P + AL G L + A + + L+
Sbjct: 506 YTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELA 565
Query: 290 KLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPG 332
+ ++ D M N +AG+ +E ++ + RG ++ PG
Sbjct: 566 PMGVILDAACEDMINTLCKAGRIKEACKLADGITERG-REVPG 607
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 124/266 (46%), Gaps = 13/266 (4%)
Query: 15 ARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMPQR----NVRSWTSVIY 66
AR +FD+M R D+ ++N ++ + G + A ++ + MP + NV S+++VI
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID 417
Query: 67 GLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLR 126
G AK G +EAL +F EM G + V+ +L ++G E + R G +
Sbjct: 418 GFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK 477
Query: 127 NVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV----VSWSSMIVGFAMHXXXXXXXXXX 182
+V NAL+ Y K G +E +VF M+ V +++S++I G++
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Query: 183 XXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSR 242
G++ + V + ++ A GLV +L+ M ++ GI P V Y ++D R
Sbjct: 538 REFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE-GISPNVVTYNSIIDAFGR 596
Query: 243 AGRLEEAREVIANMSVPPNRVVWGAL 268
+ ++ + + S+P + AL
Sbjct: 597 SATMDRSADYSNGGSLPFSSSALSAL 622
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 150/331 (45%), Gaps = 18/331 (5%)
Query: 33 MIAHLINVGYVGAARDLFSSMPQ----RNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDG 88
MI+ L G V A+ +F + V +++++I + G+ EEA+ VF+ M++ G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 89 SKPNEVTVVAVLVACAQLGDLEFGKSVHRF---AKGNGFLRNVYVCNALIDMYVKCGCLE 145
+PN VT AV+ AC + G +EF K V +F + NG + N+L+ + + G E
Sbjct: 299 LRPNLVTYNAVIDACGK-GGMEF-KQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 146 EGYRVFEGMR----ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVL 201
+F+ M E+ V S+++++ M + PN V++ V+
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 202 HACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVI---ANMSV 258
+ G D+ L MR GI Y L+ + ++ GR EEA +++ A++ +
Sbjct: 417 DGFAKAGRFDEALNLFGEMRY-LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 259 PPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLL-NDGYYVVMSNVYAEAGKWEEVSR 317
+ V + ALLGG ++ + + +L N Y + + Y++ G ++E
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 535
Query: 318 IRRLMKSRGVKKTPGCSSITIDGVVHEFVAG 348
I R KS G++ S ID + + G
Sbjct: 536 IFREFKSAGLRADVVLYSALIDALCKNGLVG 566
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 151/342 (44%), Gaps = 38/342 (11%)
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEV--TVVAVLVACAQLGDLEFGKSVHRFA 119
T +I L C++A+ + K + NE A++ + G + K + A
Sbjct: 200 TYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETA 259
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRE----RTVVSWSSMIVGFAM-HXX 174
G+ VY +ALI Y + G EE VF M+E +V+++++I
Sbjct: 260 FAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGME 319
Query: 175 XXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM--RRDYGIVPGVEH 232
M R G++P+ +TF +L CS GL + R L M RR I V
Sbjct: 320 FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRR---IEQDVFS 376
Query: 233 YGCLVDLLSRAGRLEEAREVIANMSVP---PNRVVWGALLGGC----RLHKNIVLAEEAM 285
Y L+D + + G+++ A E++A M V PN V + ++ G R + + L E M
Sbjct: 377 YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGE-M 435
Query: 286 RHLS-KLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHE 344
R+L LD ++ Y + ++Y + G+ EE I R M S G+KK D V +
Sbjct: 436 RYLGIALDRVS---YNTLLSIYTKVGRSEEALDILREMASVGIKK---------DVVTYN 483
Query: 345 FVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPD--TSVVLLD 384
+ G +G ++ +K+ +MK + +P+ T L+D
Sbjct: 484 ALLGGYGK---QGKYDEVKKVFTEMKREHVLPNLLTYSTLID 522
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 112/240 (46%), Gaps = 16/240 (6%)
Query: 57 NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH 116
++ ++ S+I A+ GM +EA+++ ++M + G+KP+ T +L + G +E S+
Sbjct: 348 SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIF 407
Query: 117 RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR----ERTVVSWSSMIVGFAMH 172
+ G N+ NA I MY G E ++F+ + +V+W++++ F +
Sbjct: 408 EEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQN 467
Query: 173 XXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR--DYGIVPGV 230
M R G P TF ++ A S G ++ +T+ RR D G+ P +
Sbjct: 468 GMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA---MTVYRRMLDAGVTPDL 524
Query: 231 EHYGCLVDLLSRAGRLEEAREVIANMS---VPPNRVVWGALLGGCRLHKNI----VLAEE 283
Y ++ L+R G E++ +V+A M PN + + +LL K I LAEE
Sbjct: 525 STYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEE 584
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 140/312 (44%), Gaps = 22/312 (7%)
Query: 32 IMIAHLINVGYVGAARDLFSSMPQR----NVRSWTSVIYGLAKCGMCEEALKVFSEMEKD 87
I+I+ L G V +A ++F+ + + +V S+TS+I A G EA+ VF +ME+D
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 88 GSKPNEVTVVAVLVACAQLGDLEFGK--SVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
G KP +T +L ++G + K S+ K +G + Y N LI + +
Sbjct: 238 GCKPTLITYNVILNVFGKMG-TPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQ 296
Query: 146 EGYRVFEGMRERTV----VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVL 201
E +VFE M+ V++++++ + M+ G P+ VT+ ++
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLI 356
Query: 202 HACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIA---NMSV 258
A + G++D+ L M + G P V Y L+ RAG++E A + N
Sbjct: 357 SAYARDGMLDEAMELKNQM-AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC 415
Query: 259 PPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSN----VYAEAGKWEE 314
PN + A + +++ N E M+ ++++ +V N V+ + G E
Sbjct: 416 KPNICTFNAFI---KMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSE 472
Query: 315 VSRIRRLMKSRG 326
VS + + MK G
Sbjct: 473 VSGVFKEMKRAG 484
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 118/288 (40%), Gaps = 22/288 (7%)
Query: 2 LLHLYASCGETRHARLMFDKM------PQRDIATWNIMIAHLINVGYVGAARDLFSSMPQ 55
LL ++ G +F +M P+R+ T+N +I+ G A ++ M
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERE--TFNTLISAYSRCGSFEQAMTVYRRMLD 517
Query: 56 RNV----RSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEF 111
V ++ +V+ LA+ GM E++ KV +EME KPNE+T ++L A A ++
Sbjct: 518 AGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGL 577
Query: 112 GKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER----TVVSWSSMIV 167
S+ + L+ + KC L E R F ++ER + + +SM+
Sbjct: 578 MHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVS 637
Query: 168 GFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL-TIMRRDYGI 226
+ M G P+ T+ +++ S K +L I+ + GI
Sbjct: 638 IYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAK--GI 695
Query: 227 VPGVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNRVVWGALLGG 271
P + Y ++ R R+ +A + + M + P+ + + +G
Sbjct: 696 KPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGS 743
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 16/207 (7%)
Query: 134 LIDMYVKCGCLEEGYRVFEGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
+I M K G + +F G++E V S++S+I FA M G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 190 MKPNYVTFIGVLHACSHVGLV-DKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEE 248
KP +T+ +L+ +G +K +L+ M+ D GI P Y L+ R +E
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD-GIAPDAYTYNTLITCCKRGSLHQE 297
Query: 249 AREVIANMSVPP---NRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSN- 304
A +V M ++V + ALL ++ +EAM+ L+++ L +V N
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLD---VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNS 354
Query: 305 ---VYAEAGKWEEVSRIRRLMKSRGVK 328
YA G +E ++ M +G K
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTK 381
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 152/367 (41%), Gaps = 25/367 (6%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS----WTSVIYGLAKCGMCEEALK 79
Q D+ T+ I++ L G + A L M Q + + ++I L +AL
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALN 277
Query: 80 VFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYV 139
+F+EM+ G +PN VT +++ G + NV +ALID +V
Sbjct: 278 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 337
Query: 140 KCGCLEEGYRVFEGMRERTV----VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYV 195
K G L E ++++ M +R++ ++SS+I GF MH MI PN V
Sbjct: 338 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 397
Query: 196 TFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 255
T+ ++ VD+G L M + G+V Y L+ +A + A+ V
Sbjct: 398 TYNTLIKGFCKAKRVDEGMELFREMSQ-RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456
Query: 256 M---SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY-YVVMSNVYAEAGK 311
M V P+ + + LL G + + A +L + + D Y Y +M +AGK
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516
Query: 312 WEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKM 371
E+ + + +GVK + + G KG+ E + L +MK
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR------------KGLKEEADALFREMKE 564
Query: 372 KGYIPDT 378
+G +PD+
Sbjct: 565 EGPLPDS 571
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 142/323 (43%), Gaps = 21/323 (6%)
Query: 18 MFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQR----NVRSWTSVIYGLAKCGM 73
M +K + ++ T+N +I L N G A L S M +R NV +++++I K G
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341
Query: 74 CEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNA 133
EA K++ EM K P+ T +++ L+ K + NV N
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 401
Query: 134 LIDMYVKCGCLEEGYRVFEGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
LI + K ++EG +F M +R V+++++I GF M+ G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
+ P+ +T+ +L + G V+ + ++R + P + Y +++ + +AG++E+
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS-KMEPDIYTYNIMIEGMCKAGKVEDG 520
Query: 250 REVIANMS---VPPNRVVWGALLGG-CRLHKNIVLAEEA---MRHLSKLDLLND-GYYVV 301
++ ++S V PN V + ++ G CR L EEA R + + L D G Y
Sbjct: 521 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKG----LKEEADALFREMKEEGPLPDSGTYNT 576
Query: 302 MSNVYAEAGKWEEVSRIRRLMKS 324
+ + G + + R M+S
Sbjct: 577 LIRAHLRDGDKAASAELIREMRS 599
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 141/334 (42%), Gaps = 15/334 (4%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMP----QRNVRSWTSVIYGLAKCGMCEEALK 79
+ DI T N ++ + + A L M Q + ++ ++I+GL + EA+
Sbjct: 148 EPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVA 207
Query: 80 VFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYV 139
+ M G +P+ VT V+ + GD++ S+ + + V + N +ID
Sbjct: 208 LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC 267
Query: 140 KCGCLEEGYRVFEGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYV 195
+ + +F M + VV+++S+I + MI + PN V
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327
Query: 196 TFIGVLHACSHVG-LVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAR---E 251
TF ++ A G LV+ + +++R I P + Y L++ RL+EA+ E
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKR--SIDPDIFTYSSLINGFCMHDRLDEAKHMFE 385
Query: 252 VIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLL-NDGYYVVMSNVYAEAG 310
++ + PN V + L+ G K + E R +S+ L+ N Y + + + +A
Sbjct: 386 LMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 445
Query: 311 KWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHE 344
+ + + + M S GV SI +DG+ +
Sbjct: 446 ECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNN 479
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 103/251 (41%), Gaps = 40/251 (15%)
Query: 14 HARLMFDKMPQRD----IATWNIMIAHLINVGYVGAARDLFSSMPQR----NVRSWTSVI 65
A+ MF+ M +D + T+N +I V +LF M QR N ++T++I
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 66 YGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL 125
+G + C+ A VF +M DG P+ +T +L G +E V + + +
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 126 RNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM 185
++Y N +I+ K G +E+G+ +F + +
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK---------------------------- 530
Query: 186 IRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGR 245
G+KPN VT+ ++ GL ++ AL M+ + G +P Y L+ R G
Sbjct: 531 ---GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE-GPLPDSGTYNTLIRAHLRDGD 586
Query: 246 LEEAREVIANM 256
+ E+I M
Sbjct: 587 KAASAELIREM 597
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 126/311 (40%), Gaps = 34/311 (10%)
Query: 58 VRSWTSVIYGLAKCGM-------CEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLE 110
VR ++ V Y K + ++A+ +F +M K P+ V +L A A++ +
Sbjct: 39 VRDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFD 98
Query: 111 FGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR----ERTVVSWSSMI 166
S+ + G N+Y + LI+ + + L V M E +V+ +S++
Sbjct: 99 LVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLL 158
Query: 167 VGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGI 226
GF M+ +G +P+ TF ++H GL RA + D +
Sbjct: 159 NGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIH-----GLFRHNRASEAVALVDRMV 213
Query: 227 VPGVE----HYGCLVDLLSRAGRLEEAREVIANMS---VPPNRVVWGALLGGCRLHKNIV 279
V G + YG +V+ L + G ++ A ++ M + P V++ ++ +KN+
Sbjct: 214 VKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNV- 272
Query: 280 LAEEAMRHLSKLDLLNDGY------YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGC 333
+A+ +++D N G Y + G+W + SR+ M R +
Sbjct: 273 --NDALNLFTEMD--NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 328
Query: 334 SSITIDGVVHE 344
S ID V E
Sbjct: 329 FSALIDAFVKE 339
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 148/395 (37%), Gaps = 56/395 (14%)
Query: 2 LLHLYASCGETRHARLMFDKM----PQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRN 57
+LH Y+ G+ A +F++M P + T+N+++ D+F M
Sbjct: 216 ILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVIL-------------DVFGKMG--- 259
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
RSW + L V EM G K +E T VL ACA+ G L K
Sbjct: 260 -RSWRKI-------------LGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFA 305
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV----VSWSSMIVGFAMHX 173
K G+ NAL+ ++ K G E V + M E + V+++ ++ +
Sbjct: 306 ELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAG 365
Query: 174 XXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHY 233
M + G+ PN +T+ V+ A G D+ L M ++ G VP Y
Sbjct: 366 FSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM-KEAGCVPNTCTY 424
Query: 234 GCLVDLLSRAGRLEEAREVIANMS---VPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSK 290
++ LL + R E +++ +M PNR W +L C R +
Sbjct: 425 NAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKS 484
Query: 291 LDLLND-GYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGD 349
D + + + Y G + S++ M G + ++ +
Sbjct: 485 CGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALAR------ 538
Query: 350 ETHPQAKGIFEMWEKLLVKMKMKGYIP-DTSVVLL 383
KG + E ++ MK KG+ P +TS L+
Sbjct: 539 ------KGDWRSGENVISDMKSKGFKPTETSYSLM 567
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 23/283 (8%)
Query: 23 PQRDIATWNIMIAHLINVGYVGAARDLFSSM------PQRNVRSWTSVIYGLAKCGMCEE 76
P R ATWN M+A N G +F M P R+ ++ ++I +CG +
Sbjct: 454 PNR--ATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRD--TFNTLISAYGRCGSEVD 509
Query: 77 ALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALID 136
A K++ EM + G T A+L A A+ GD G++V K GF + ++
Sbjct: 510 ASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQ 569
Query: 137 MYVKCGCLEEGYRVFEGMRERTVV-SW---SSMIVGFAMHXXXXXXXXXXXXMIRVGMKP 192
Y K G R+ ++E + SW ++++ + G KP
Sbjct: 570 CYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKP 629
Query: 193 NYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV 252
+ V F +L + + D+ +L +R D G+ P + Y L+D+ R G +A E+
Sbjct: 630 DMVIFNSMLSIFTRNNMYDQAEGILESIRED-GLSPDLVTYNSLMDMYVRRGECWKAEEI 688
Query: 253 IANM---SVPPNRVVWGALLGG-CRLHKNIVLAEEAMRHLSKL 291
+ + + P+ V + ++ G CR L +EA+R LS++
Sbjct: 689 LKTLEKSQLKPDLVSYNTVIKGFCRRG----LMQEAVRMLSEM 727
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 125/325 (38%), Gaps = 19/325 (5%)
Query: 11 ETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMP----QRNVRSWTSVIY 66
E R L FD+ T + +++ G + A++ F+ + + ++ +++
Sbjct: 271 EMRSKGLKFDEF------TCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQ 324
Query: 67 GLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLR 126
K G+ EAL V EME++ + VT ++ A + G + V G +
Sbjct: 325 VFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMP 384
Query: 127 NVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV----SWSSMIVGFAMHXXXXXXXXXX 182
N +ID Y K G +E ++F M+E V ++++++
Sbjct: 385 NAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKML 444
Query: 183 XXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSR 242
M G PN T+ +L C + G+ DK + + G P + + L+ R
Sbjct: 445 CDMKSNGCSPNRATWNTMLALCGNKGM-DKFVNRVFREMKSCGFEPDRDTFNTLISAYGR 503
Query: 243 AGRLEEAREVIANMSVPPNR---VVWGALLGGCRLHKNIVLAEEAMRHL-SKLDLLNDGY 298
G +A ++ M+ + ALL + E + + SK +
Sbjct: 504 CGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETS 563
Query: 299 YVVMSNVYAEAGKWEEVSRIRRLMK 323
Y +M YA+ G + + RI +K
Sbjct: 564 YSLMLQCYAKGGNYLGIERIENRIK 588
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 156/365 (42%), Gaps = 16/365 (4%)
Query: 27 IATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIY-----GLAKCGMCEEALKVF 81
+ + NI+I L VG + A +L S M + V SV Y G GM A +V
Sbjct: 257 VYSHNILINGLCLVGSIAEALELASDMNKHGVEP-DSVTYNILAKGFHLLGMISGAWEVI 315
Query: 82 SEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGF-LRNVYVCNALIDMYVK 140
+M G P+ +T +L QLG+++ G + + GF L ++ C+ ++ K
Sbjct: 316 RDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCK 375
Query: 141 CGCLEEGYRVFEGMR----ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVT 196
G ++E +F M+ +V++S +I G M + PN T
Sbjct: 376 TGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRT 435
Query: 197 FIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEARE---VI 253
+L G++ + R+LL + G + Y ++D +++G +EEA E V+
Sbjct: 436 HGALLLGLCQKGMLLEARSLLDSLISS-GETLDIVLYNIVIDGYAKSGCIEEALELFKVV 494
Query: 254 ANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY-YVVMSNVYAEAGKW 312
+ P+ + +L+ G +NI A + + + L Y + + YA G
Sbjct: 495 IETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNT 554
Query: 313 EEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMK 372
+ + +RR MK+ G+ T S+ G+ + + H + IFE ++ L M+ +
Sbjct: 555 KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESE 614
Query: 373 GYIPD 377
G PD
Sbjct: 615 GIPPD 619
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 108/243 (44%), Gaps = 20/243 (8%)
Query: 48 DLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLG 107
D++ + +N ++++V+ GL + E+A+ E P+ V+ +++ +LG
Sbjct: 177 DVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLG 236
Query: 108 DLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV----VSWS 163
++ KS G + +VY N LI+ G + E + M + V V+++
Sbjct: 237 FVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYN 296
Query: 164 SMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL-TIMRR 222
+ GF + M+ G+ P+ +T+ +L +G +D G LL ++ R
Sbjct: 297 ILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 356
Query: 223 DY---GIVPGVEHYGCLVDL--LSRAGRLEEAREVIANMS---VPPNRVVWGALLGG-CR 273
+ I+P C V L L + GR++EA + M + P+ V + ++ G C+
Sbjct: 357 GFELNSIIP------CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCK 410
Query: 274 LHK 276
L K
Sbjct: 411 LGK 413
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 156/365 (42%), Gaps = 16/365 (4%)
Query: 27 IATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIY-----GLAKCGMCEEALKVF 81
+ + NI+I L VG + A +L S M + V SV Y G GM A +V
Sbjct: 257 VYSHNILINGLCLVGSIAEALELASDMNKHGVEP-DSVTYNILAKGFHLLGMISGAWEVI 315
Query: 82 SEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGF-LRNVYVCNALIDMYVK 140
+M G P+ +T +L QLG+++ G + + GF L ++ C+ ++ K
Sbjct: 316 RDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCK 375
Query: 141 CGCLEEGYRVFEGMR----ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVT 196
G ++E +F M+ +V++S +I G M + PN T
Sbjct: 376 TGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRT 435
Query: 197 FIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEARE---VI 253
+L G++ + R+LL + G + Y ++D +++G +EEA E V+
Sbjct: 436 HGALLLGLCQKGMLLEARSLLDSLISS-GETLDIVLYNIVIDGYAKSGCIEEALELFKVV 494
Query: 254 ANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY-YVVMSNVYAEAGKW 312
+ P+ + +L+ G +NI A + + + L Y + + YA G
Sbjct: 495 IETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNT 554
Query: 313 EEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMK 372
+ + +RR MK+ G+ T S+ G+ + + H + IFE ++ L M+ +
Sbjct: 555 KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESE 614
Query: 373 GYIPD 377
G PD
Sbjct: 615 GIPPD 619
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 108/243 (44%), Gaps = 20/243 (8%)
Query: 48 DLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLG 107
D++ + +N ++++V+ GL + E+A+ E P+ V+ +++ +LG
Sbjct: 177 DVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLG 236
Query: 108 DLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV----VSWS 163
++ KS G + +VY N LI+ G + E + M + V V+++
Sbjct: 237 FVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYN 296
Query: 164 SMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT-IMRR 222
+ GF + M+ G+ P+ +T+ +L +G +D G LL ++ R
Sbjct: 297 ILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 356
Query: 223 DY---GIVPGVEHYGCLVDL--LSRAGRLEEAREVIANMS---VPPNRVVWGALLGG-CR 273
+ I+P C V L L + GR++EA + M + P+ V + ++ G C+
Sbjct: 357 GFELNSIIP------CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCK 410
Query: 274 LHK 276
L K
Sbjct: 411 LGK 413
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/454 (20%), Positives = 186/454 (40%), Gaps = 42/454 (9%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRN----VRSWTSVIYGLAKCGMCEEALKVF 81
DI T+N +I+ + G + A +L ++MP + V ++ +VI GL K G E A +VF
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 82 SEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKC 141
+EM + G P+ T ++L+ + GD+ + V + + ++ ++++ ++ +
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS 388
Query: 142 GCLEEGYRVFEGMRERTVVS----WSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTF 197
G L++ F ++E ++ ++ +I G+ M++ G + VT+
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTY 448
Query: 198 IGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS 257
+LH ++ + L M + + P L+D + G L+ A E+ M
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEM-TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 507
Query: 258 ---VPPNRVVWGALLGGCRLHKNIVLAEEAMRHL-SKLDLLNDGYYVVMSNVYAEAGKWE 313
+ + V + LL G +I A+E + SK L Y ++ N G
Sbjct: 508 EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLA 567
Query: 314 EVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKG 373
E R+ M S+ +K T + I G A D E L KM +G
Sbjct: 568 EAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASD------------GESFLEKMISEG 615
Query: 374 YIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAF 433
++PD + I+ + E ++ +GL+ ++ ++ F
Sbjct: 616 FVPDCI--------SYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGF 667
Query: 434 KLVSEIENREIVVR---------DRNRFHCFKDG 458
++++ E+V+R DR+ + C +G
Sbjct: 668 CRQNQMKEAEVVLRKMIERGVNPDRSTYTCMING 701
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 115/286 (40%), Gaps = 46/286 (16%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMPQR 56
+L+ Y + R A F + + I N +I L+ +G+V A ++ + +
Sbjct: 170 LLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRS 229
Query: 57 ----NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG 112
NV + ++ L K G E+ S++++ G P+ VT ++ A + G +E
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEA 289
Query: 113 KSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMH 172
+ G GF VY N +I+ K G E VF
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF--------------------- 328
Query: 173 XXXXXXXXXXXXMIRVGMKPNYVTFIGVL-HACSHVGLVDKGRALLTIMRRDYGIVPGVE 231
M+R G+ P+ T+ +L AC +V+ + + RD +VP +
Sbjct: 329 ----------AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRD--VVPDLV 376
Query: 232 HYGCLVDLLSRAGRLEEAR---EVIANMSVPPNRVVWGALLGG-CR 273
+ ++ L +R+G L++A + + P+ V++ L+ G CR
Sbjct: 377 CFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 140/309 (45%), Gaps = 13/309 (4%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQ----RNVRSWTSVIYGLAKCGMCEEALKVF 81
D+ ++ I+I G + + DL + + NV +T++I G K G E+A +F
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 82 SEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKC 141
EM K G NE T ++ + G + G ++ + +G N+Y N +++ K
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 142 GCLEEGYRVFEGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTF 197
G ++ ++VF+ MRER +V+++++I G M G+ PN +T+
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 198 IGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS 257
++ VG + K +L + + G+ P + Y LV R G A +++ M
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDL-KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME 400
Query: 258 ---VPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY-YVVMSNVYAEAGKWE 313
+ P++V + L+ N+ A + + +L L+ D + Y V+ + + G+
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMN 460
Query: 314 EVSRIRRLM 322
E SR+ + M
Sbjct: 461 EASRLFKSM 469
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 157/384 (40%), Gaps = 29/384 (7%)
Query: 10 GETRHARLMFDKMP----QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVR----SW 61
G+ A L+ D+M Q + T+ ++ + G A +L M +R ++ +
Sbjct: 191 GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKY 250
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+ +I GL K G + A +F+EME G K + + ++ G + G + R
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV----VSWSSMIVGFAMHXXXXX 177
+V +ALID +VK G L E + + M +R + V+++S+I GF
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 370
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
M+ G PN TF +++ L+D G L M G+V Y L+
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL-RGVVADTVTYNTLI 429
Query: 238 DLLSRAGRLEEAREVIANM---SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDL- 293
G+LE A+E+ M V P+ V + LL G + A E + K +
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Query: 294 LNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHP 353
L+ G Y ++ + A K ++ + + +GVK +I I G+
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK---------- 539
Query: 354 QAKGIFEMWEKLLVKMKMKGYIPD 377
KG + L KM+ G+ P+
Sbjct: 540 --KGSLSEADLLFRKMEEDGHSPN 561
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 146/376 (38%), Gaps = 27/376 (7%)
Query: 9 CGETRHARLMFDKMP-------QRDIATWNIMIAHLINVGYVGAARDLFSSMPQR----N 57
C R L F M + D T++ +I L G V A +L M +
Sbjct: 117 CCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT 176
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
+ + +++ GL G +A+ + M + G +PNEVT VL + G + R
Sbjct: 177 LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLR 236
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR----ERTVVSWSSMIVGFAMHX 173
+ + + +ID K G L+ + +F M + ++ ++++I GF
Sbjct: 237 KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296
Query: 174 XXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHY 233
MI+ + P+ V F ++ G + + L M + GI P Y
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ-RGISPDTVTY 355
Query: 234 GCLVDLLSRAGRLEEAR---EVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSK 290
L+D + +L++A +++ + PN + L+ G I E R +S
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415
Query: 291 LDLLNDG-YYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGD 349
++ D Y + + E GK E + + M SR V+ I +DG+ D
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC------D 469
Query: 350 ETHPQ-AKGIFEMWEK 364
P+ A IFE EK
Sbjct: 470 NGEPEKALEIFEKIEK 485
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMPQR 56
+LL GE A +F+K+ + DI +NI+I + N V A DLF S+P +
Sbjct: 462 ILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 521
Query: 57 ----NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG 112
+V+++ +I GL K G EA +F +ME+DG PN T ++ A GD
Sbjct: 522 GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKS 581
Query: 113 KSVHRFAKGNGFLRNVYVCNALIDM 137
+ K GF + ++DM
Sbjct: 582 AKLIEEIKRCGFSVDASTVKMVVDM 606
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 147/331 (44%), Gaps = 23/331 (6%)
Query: 47 RDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQL 106
+++ S NV ++ +I G G + AL +F +ME G PN VT ++ +L
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 107 GDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV----VSW 162
++ G + R G N+ N +I+ + G ++E V M R V++
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR 222
+++I G+ M+R G+ P+ +T+ ++H+ G +++ L MR
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 223 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS---VPPNRVVWGALLGG-C---RLH 275
G+ P Y LVD S+ G + EA V+ M+ P+ V + AL+ G C ++
Sbjct: 374 R-GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 276 KNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSS 335
I + E+ D+++ Y V+S + + +E R++R M +G+K +
Sbjct: 433 DAIAVLEDMKEKGLSPDVVS--YSTVLSG-FCRSYDVDEALRVKREMVEKGIKP----DT 485
Query: 336 ITIDGVVHEFVAGDETHPQAKGIFEMWEKLL 366
IT ++ F T K +++E++L
Sbjct: 486 ITYSSLIQGFCEQRRT----KEACDLYEEML 512
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 125/297 (42%), Gaps = 19/297 (6%)
Query: 10 GETRHARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMPQR----NVRSW 61
G + + +M +R D T+N +I G A + + M + +V ++
Sbjct: 289 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 348
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
TS+I+ + K G A++ +M G PNE T ++ +Q G + V R
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 408
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER----TVVSWSSMIVGFAMHXXXXX 177
NGF +V NALI+ + G +E+ V E M+E+ VVS+S+++ GF
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDE 468
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
M+ G+KP+ +T+ ++ + L M R G+ P Y L+
Sbjct: 469 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR-VGLPPDEFTYTALI 527
Query: 238 DLLSRAGRLEEAREVIANM---SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL 291
+ G LE+A ++ M V P+ V + L+ G EA R L KL
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSR---TREAKRLLLKL 581
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 149/357 (41%), Gaps = 17/357 (4%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMP-- 54
+L+ + G A +FDKM + ++ T+N +I + + L SM
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269
Query: 55 --QRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG 112
+ N+ S+ VI GL + G +E V +EM + G +EVT ++ + G+
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 113 KSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV----SWSSMIVG 168
+H +G +V +LI K G + + MR R + ++++++ G
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 169 FAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVP 228
F+ M G P+ VT+ +++ G ++ A+L M+ + G+ P
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK-EKGLSP 448
Query: 229 GVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
V Y ++ R+ ++EA V M + P+ + + +L+ G + A +
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508
Query: 286 RHLSKLDLLNDGY-YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGV 341
+ ++ L D + Y + N Y G E+ ++ M +GV S+ I+G+
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 117/290 (40%), Gaps = 28/290 (9%)
Query: 99 VLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG-CLEEGYRVFEGMRER 157
V+ + ++L ++ S+ A+ +GF+ V NA++D ++ + VF+ M E
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 158 ----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKG 213
V +++ +I GF M G PN VT+ ++ + +D G
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 214 RALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS---VPPNRVVWGALLG 270
LL M G+ P + Y +++ L R GR++E V+ M+ + V + L+
Sbjct: 260 FKLLRSMALK-GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIK 318
Query: 271 G-CR---LHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRG 326
G C+ H+ +V+ E +RH ++ Y + + +AG M+ RG
Sbjct: 319 GYCKEGNFHQALVMHAEMLRHGLTPSVIT---YTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 327 VKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIP 376
+ + +DG KG ++L +M G+ P
Sbjct: 376 LCPNERTYTTLVDGF------------SQKGYMNEAYRVLREMNDNGFSP 413
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 163/385 (42%), Gaps = 40/385 (10%)
Query: 14 HARLMFDKMPQRDIATWNIMIAHLIN----VGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
A M ++M R A +I +L+N +G V AA+DLF +P+ + + ++I+G
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFV 364
Query: 70 KCGMCEEALKVFSEMEKD-GSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNV 128
G ++A V S+M G P+ T +++ + G + V + G NV
Sbjct: 365 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 424
Query: 129 YVCNALIDMYVKCGCLEEGYRVF-----EGMRERTVVSWSSMIVGFAMHXXXXXXXXXXX 183
Y L+D + K G ++E Y V +G++ T V ++ +I F
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNT-VGFNCLISAFCKEHRIPEAVEIFR 483
Query: 184 XMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRA 243
M R G KP+ TF ++ V + LL M + G+V Y L++ R
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE-GVVANTVTYNTLINAFLRR 542
Query: 244 GRLEEAREVIANM---SVPPNRVVWGALLGG-CRLHKNIVLAEEAMRHLSKLDLLNDGYY 299
G ++EAR+++ M P + + + +L+ G CR + ++A K +L DG+
Sbjct: 543 GEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGE----VDKARSLFEK--MLRDGHA 596
Query: 300 V------VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHP 353
++ N +G EE ++ M RG TP +T + +++
Sbjct: 597 PSNISCNILINGLCRSGMVEEAVEFQKEMVLRG--STPDI--VTFNSLINGLCRA----- 647
Query: 354 QAKGIFEMWEKLLVKMKMKGYIPDT 378
G E + K++ +G PDT
Sbjct: 648 ---GRIEDGLTMFRKLQAEGIPPDT 669
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 122/289 (42%), Gaps = 18/289 (6%)
Query: 2 LLHLYASCGETRHARLMFDKMPQR-----DIATWNIMIAHLINVGYVGAARDLFSSMPQR 56
L+H + + G A+ + M D+ T+N +I G VG A ++ M +
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 57 ----NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG 112
NV S+T ++ G K G +EA V +EM DG KPN V ++ A + +
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 113 KSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV----VSWSSMIVG 168
+ R G +VY N+LI + ++ + M V V+++++I
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Query: 169 FAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVP 228
F M+ G + +T+ ++ G VDK R+L M RD G P
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD-GHAP 597
Query: 229 GVEHYGCLVDLLSRAGRLEEAREVIANMSV---PPNRVVWGALLGG-CR 273
L++ L R+G +EEA E M + P+ V + +L+ G CR
Sbjct: 598 SNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCR 646
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 158/361 (43%), Gaps = 21/361 (5%)
Query: 15 ARLMFDKMPQR---DIATWNIMIAHLINVGYVGAARDLFSSMPQR----NVRSWTSVIYG 67
A + +D + ++ + T+ +++ V + +A L M + N + ++I+
Sbjct: 202 ANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHS 261
Query: 68 LAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDL-EFGKSVHRFAKGNGFLR 126
L+KC EAL++ EM G P+ T V++ + + E K V+R GF
Sbjct: 262 LSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLI-RGFAP 320
Query: 127 NVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI 186
+ L++ K G ++ +F + + +V ++++I GF H M+
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMV 380
Query: 187 -RVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGR 245
G+ P+ T+ +++ GLV +L M R+ G P V Y LVD + G+
Sbjct: 381 TSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM-RNKGCKPNVYSYTILVDGFCKLGK 439
Query: 246 LEEAREVIANMS---VPPNRVVWGALLGG-CRLHKNIVLAEEAMRHLSKLDLLNDGY-YV 300
++EA V+ MS + PN V + L+ C+ H+ I A E R + + D Y +
Sbjct: 440 IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR-IPEAVEIFREMPRKGCKPDVYTFN 498
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFE 360
+ + E + + + R M S GV +++T + +++ F+ E K + E
Sbjct: 499 SLISGLCEVDEIKHALWLLRDMISEGVV----ANTVTYNTLINAFLRRGEIKEARKLVNE 554
Query: 361 M 361
M
Sbjct: 555 M 555
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 164/409 (40%), Gaps = 41/409 (10%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAAR-----------DL 49
+L+H + C A + KM + + + L+N G+ R D
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLN-GFCQGNRFQEAVSLVDSMDG 177
Query: 50 FSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDL 109
F +P NV + +VI GL K AL+VF MEK G + + VT ++ + G
Sbjct: 178 FGFVP--NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 235
Query: 110 EFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV----SWSSM 165
+ R NV ALID +VK G L E +++ M R+VV +++S+
Sbjct: 236 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
I GF +H M+ G P+ VT+ ++ V+ G L M G
Sbjct: 296 INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ-G 354
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNRVVWGALL----GGCRLHKNI 278
+V Y L+ +AG+L A++V M V P+ V + LL ++ K +
Sbjct: 355 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 414
Query: 279 VLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITI 338
V+ E+ + +D++ Y ++ K +E + R + +GVK I
Sbjct: 415 VMVEDLQKSEMDVDIIT---YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMI 471
Query: 339 DGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLED 387
G+ KG+ +KL +MK G++P + L D
Sbjct: 472 SGLCR------------KGLQREADKLCRRMKEDGFMPSERIYDETLRD 508
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 152/342 (44%), Gaps = 28/342 (8%)
Query: 29 TWNIMIAHLINVGYVGAARDLFSSMPQRNVRS----WTSVIYGLAKCGMCEEALKVFSEM 84
T+ +++ + G + A LF M +R + S +TS+I + G + A +F E+
Sbjct: 296 TYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDEL 355
Query: 85 EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCL 144
+ G P+ T A++ ++G++ + + + G V N LID Y + G +
Sbjct: 356 TEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMV 415
Query: 145 EEGYRVFEGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGV 200
+E +++ M ++ V + +++ F M+ G+K + V++ +
Sbjct: 416 DEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNL 475
Query: 201 LHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS--- 257
+ G V++ + L M G+ P Y ++ + G+++EAR++ ANM
Sbjct: 476 IDVYCKEGNVEEAKRLFVEMSSK-GVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG 534
Query: 258 VPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDL----LNDGYYVVMSNVYAEAGKWE 313
+ P+ + +L+ G + N+ +EAMR S++ L N Y VM + ++AGK +
Sbjct: 535 MDPDSYTYTSLIHGECIADNV---DEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSD 591
Query: 314 EVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQA 355
E + MK +G TID V+ + G P+
Sbjct: 592 EAFGLYDEMKRKGY---------TIDNKVYTALIGSMHSPET 624
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 91/217 (41%), Gaps = 15/217 (6%)
Query: 2 LLHLYASCGETRHARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMPQRN 57
L+ Y G A +++D M Q+ D+ T N + + + A+ M +
Sbjct: 405 LIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGG 464
Query: 58 VR----SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGK 113
V+ S+T++I K G EEA ++F EM G +PN +T ++ A + G ++ +
Sbjct: 465 VKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEAR 524
Query: 114 SVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM----RERTVVSWSSMIVGF 169
+ + NG + Y +LI ++E R+F M ++ V+++ MI G
Sbjct: 525 KLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGL 584
Query: 170 AMHXXXXXXXXXXXXMIRVGMKPN---YVTFIGVLHA 203
+ M R G + Y IG +H+
Sbjct: 585 SKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSMHS 621
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 126/281 (44%), Gaps = 12/281 (4%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMP----QRNVRSWTSVIYGLAKCGMCEEALK 79
+ D T+ M+ +L GA L M Q N ++ +I+ + EA+
Sbjct: 361 KHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 80 VFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYV 139
VF++M++ G KP+ VT ++ A+ G L+ +++ + G + + + +I+
Sbjct: 421 VFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLG 480
Query: 140 KCGCLEEGYRVFEGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYV 195
K G L +++F M ++ +V+++ M+ A M G +P+ V
Sbjct: 481 KAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKV 540
Query: 196 TFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA---REV 252
T+ V+ H G +++ A+ T M++ +P YG LVDL +AG +E+A +
Sbjct: 541 TYSIVMEVLGHCGYLEEAEAVFTEMQQK-NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA 599
Query: 253 IANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDL 293
+ + + PN +LL I A E ++++ L L
Sbjct: 600 MLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 162/394 (41%), Gaps = 37/394 (9%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMP-- 54
+ LH AS A + D+M QR D+ T+ ++ L G + A +L + M
Sbjct: 198 LFLHNKAS-----EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAA 252
Query: 55 --QRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG 112
+ NV + ++I L K E A+ +F+EME G +PN VT +++ G
Sbjct: 253 RIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDA 312
Query: 113 KSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV----VSWSSMIVG 168
+ NV NALID + K G L E ++ E M +R++ ++++ +I G
Sbjct: 313 SRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLING 372
Query: 169 FAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVP 228
F MH M+ PN T+ +++ V+ G L M + G+V
Sbjct: 373 FCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ-RGLVG 431
Query: 229 GVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
Y ++ +AG + A+ V M VP + + + LL G + + A
Sbjct: 432 NTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIF 491
Query: 286 RHLSKLDL-LNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHE 344
++L K ++ LN Y M +AGK V L S +K + I G+
Sbjct: 492 KYLQKSEMELNIFIYNTMIEGMCKAGK---VGEAWDLFCSLSIKPDVVTYNTMISGLC-- 546
Query: 345 FVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDT 378
+K + + + L KMK G +P++
Sbjct: 547 ----------SKRLLQEADDLFRKMKEDGTLPNS 570
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 129/283 (45%), Gaps = 10/283 (3%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQR----NVRSWTSVIYGLAKCGMCEEALKVF 81
++ T+N +I L N G A L S+M ++ NV ++ ++I K G EA K+
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 82 SEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKC 141
EM + P+ +T ++ L+ K + +F L N+ N LI+ + KC
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC 411
Query: 142 GCLEEGYRVFEGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTF 197
+E+G +F M +R V+++++I GF M+ + + +T+
Sbjct: 412 KRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTY 471
Query: 198 IGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS 257
+LH G +D + +++ + + Y +++ + +AG++ EA ++ ++S
Sbjct: 472 SILLHGLCSYGKLDTALVIFKYLQKS-EMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS 530
Query: 258 VPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLL-NDGYY 299
+ P+ V + ++ G + + A++ R + + L N G Y
Sbjct: 531 IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTY 573
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 124/300 (41%), Gaps = 41/300 (13%)
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
++T++I+GL EA+ + +M + G +P+ VT V+ + GD++ ++
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM 249
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
+ NV + N +ID K +E +F M +
Sbjct: 250 EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETK---------------------- 287
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHA-CSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVD 238
G++PN VT+ +++ C++ D R L ++ + I P V + L+D
Sbjct: 288 ---------GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK--INPNVVTFNALID 336
Query: 239 LLSRAGRLEEAREVIANM---SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLL- 294
+ G+L EA ++ M S+ P+ + + L+ G +H + A++ + + D L
Sbjct: 337 AFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLP 396
Query: 295 NDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQ 354
N Y + N + + + E+ + R M RG+ + I G F AGD Q
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF---FQAGDCDSAQ 453
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 132/319 (41%), Gaps = 35/319 (10%)
Query: 75 EEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNAL 134
++A+ +F +M K P+ V +L A A++ E S+ + G ++Y +
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 135 IDMYVKCGCLEEGYRVFEGMR----ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGM 190
I+ + + L V M E +V+ SS++ G+ M+ +G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 191 KPNYVTFIGVLH-------ACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRA 243
KP+ TF ++H A V LVD+ +++R G P + YG +V+ L +
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQ------MVQR--GCQPDLVTYGTVVNGLCKR 236
Query: 244 GRLEEAREVIANMS---VPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDL-LNDGYY 299
G ++ A ++ M + N V++ ++ ++++ +A + + + N Y
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIF 359
+ N G+W + SR+ S ++K + +T + ++ F +G
Sbjct: 297 NSLINCLCNYGRWSDASRLL----SNMLEKKINPNVVTFNALIDAFF--------KEGKL 344
Query: 360 EMWEKLLVKMKMKGYIPDT 378
EKL +M + PDT
Sbjct: 345 VEAEKLHEEMIQRSIDPDT 363
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 126/281 (44%), Gaps = 12/281 (4%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMP----QRNVRSWTSVIYGLAKCGMCEEALK 79
+ D T+ M+ +L GA L M Q N ++ +I+ + EA+
Sbjct: 361 KHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 80 VFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYV 139
VF++M++ G KP+ VT ++ A+ G L+ +++ + G + + + +I+
Sbjct: 421 VFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLG 480
Query: 140 KCGCLEEGYRVFEGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYV 195
K G L +++F M ++ +V+++ M+ A M G +P+ V
Sbjct: 481 KAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKV 540
Query: 196 TFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA---REV 252
T+ V+ H G +++ A+ T M++ +P YG LVDL +AG +E+A +
Sbjct: 541 TYSIVMEVLGHCGYLEEAEAVFTEMQQK-NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA 599
Query: 253 IANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDL 293
+ + + PN +LL I A E ++++ L L
Sbjct: 600 MLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 126/281 (44%), Gaps = 12/281 (4%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMP----QRNVRSWTSVIYGLAKCGMCEEALK 79
+ D T+ M+ +L GA L M Q N ++ +I+ + EA+
Sbjct: 361 KHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 80 VFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYV 139
VF++M++ G KP+ VT ++ A+ G L+ +++ + G + + + +I+
Sbjct: 421 VFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLG 480
Query: 140 KCGCLEEGYRVFEGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYV 195
K G L +++F M ++ +V+++ M+ A M G +P+ V
Sbjct: 481 KAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKV 540
Query: 196 TFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA---REV 252
T+ V+ H G +++ A+ T M++ +P YG LVDL +AG +E+A +
Sbjct: 541 TYSIVMEVLGHCGYLEEAEAVFTEMQQK-NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA 599
Query: 253 IANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDL 293
+ + + PN +LL I A E ++++ L L
Sbjct: 600 MLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 119/261 (45%), Gaps = 13/261 (4%)
Query: 10 GETRHARLMFDKMPQRDIA----TWNIMIAHLINVGYVGAARDLFSSMPQR----NVRSW 61
GE + A + D+M RD + T+N +I+ L V A +L + + +V ++
Sbjct: 344 GEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTF 403
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
S+I GL A+++F EM G +P+E T ++ + G L+ ++ + +
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR----ERTVVSWSSMIVGFAMHXXXXX 177
+G R+V N LID + K E +F+ M R V+++++I G
Sbjct: 464 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
MI G KP+ T+ +L G + K ++ M + G P + YG L+
Sbjct: 524 AAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN-GCEPDIVTYGTLI 582
Query: 238 DLLSRAGRLEEAREVIANMSV 258
L +AGR+E A +++ ++ +
Sbjct: 583 SGLCKAGRVEVASKLLRSIQM 603
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/402 (19%), Positives = 151/402 (37%), Gaps = 60/402 (14%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQR----NVRSWTSVIYGLAKCGMCEEALKVF 81
D T+N ++ L G+V A ++ M Q +V ++ SVI GL K G +EA++V
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVL 353
Query: 82 SEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNV------------- 128
+M PN VT ++ + +E + R G L +V
Sbjct: 354 DQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLT 413
Query: 129 ----------------------YVCNALIDMYVKCGCLEEGYRVFEGMR----ERTVVSW 162
+ N LID G L+E + + M R+V+++
Sbjct: 414 RNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITY 473
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR 222
+++I GF M G+ N VT+ ++ V+ L+ M
Sbjct: 474 NTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM 533
Query: 223 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS---VPPNRVVWGALLGGCRLHKNIV 279
+ G P Y L+ R G +++A +++ M+ P+ V +G L+ G +
Sbjct: 534 E-GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592
Query: 280 LAEEAMR--HLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSIT 337
+A + +R + ++L Y V+ ++ + E ++ R +++ I
Sbjct: 593 VASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652
Query: 338 IDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTS 379
G+ + G LV++ KG++P+ S
Sbjct: 653 FRGLCN-----------GGGPIREAVDFLVELLEKGFVPEFS 683
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 129/317 (40%), Gaps = 17/317 (5%)
Query: 57 NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH 116
+V ++ +I L + A+ + +M G P+E T V+ + GDL+ +
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 117 RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER-----TVVSWSSMIVGFAM 171
G + N ++ + K G +E+ + M + ++++++ G
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 172 HXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM-RRDYGIVPGV 230
M++ G P+ T+ V+ +G V + +L M RD P
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS--PNT 365
Query: 231 EHYGCLVDLLSRAGRLEEARE---VIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRH 287
Y L+ L + ++EEA E V+ + + P+ + +L+ G L +N +A E
Sbjct: 366 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE 425
Query: 288 LSKLDLLNDGY-YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFV 346
+ D + Y ++ + GK +E + + M+ G + S IT + ++ F
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR----SVITYNTLIDGFC 481
Query: 347 AGDETHPQAKGIFEMWE 363
++T +A+ IF+ E
Sbjct: 482 KANKTR-EAEEIFDEME 497
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 161/394 (40%), Gaps = 41/394 (10%)
Query: 6 YASCGETRHARLMFDKMPQRDIA----TWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
Y S G+ A ++ +M + IA T+ +++ L G + A LF+ M + NV+
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKP- 540
Query: 62 TSVIYGLAKCGMCEE-----ALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKS-V 115
V Y + G CEE A + EM + G P+ + ++ G K V
Sbjct: 541 NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFV 600
Query: 116 HRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV----VSWSSMIVGFAM 171
KGN L N L+ + + G LEE V + M +R V V + +I G
Sbjct: 601 DGLHKGNCEL-NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK 659
Query: 172 HXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVE 231
H M G+KP+ V + ++ A S G + + +M + G VP
Sbjct: 660 HKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE-GCVPNEV 718
Query: 232 HYGCLVDLLSRAGRLEEAREVIANM---SVPPNRVVWGALL-----GGCRLHKNIVLAEE 283
Y +++ L +AG + EA + + M S PN+V +G L G + K + L
Sbjct: 719 TYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNA 778
Query: 284 AMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVH 343
++ L L N Y ++ + G+ EE S + M GV +P C IT +++
Sbjct: 779 ILKGL----LANTATYNMLIRGFCRQGRIEEASELITRMIGDGV--SPDC--ITYTTMIN 830
Query: 344 EFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPD 377
E ++ K E+W M KG PD
Sbjct: 831 ELCRRND----VKKAIELWN----SMTEKGIRPD 856
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 142/343 (41%), Gaps = 22/343 (6%)
Query: 57 NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH 116
N+ + ++I L K EA +F M K G +PN+VT ++ + G L+ S
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Query: 117 RFAKGNGFLRNVYVCNALIDMYVKCGCLE--EGY--RVFEGMRERTVVSWSSMIVGFAMH 172
G +VY N+LI+ + K G + EG+ + E TVV+++S++ G+
Sbjct: 426 GEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK 485
Query: 173 XXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEH 232
M G+ P+ TF +L GL+ L M ++ + P
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA-EWNVKPNRVT 544
Query: 233 YGCLVDLLSRAGRLEEAREVIANMS---VPPNRVVWGALLGGCRLHKNIVLAEEAMRHLS 289
Y +++ G + +A E + M+ + P+ + L+ G L A+ + L
Sbjct: 545 YNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH 604
Query: 290 KLDL-LNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAG 348
K + LN+ Y + + + GK EE + + M RGV C + IDG +
Sbjct: 605 KGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK----- 659
Query: 349 DETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQK 391
H K F LL +M +G PD V+ + DAK K
Sbjct: 660 ---HKDRKLFF----GLLKEMHDRGLKPD-DVIYTSMIDAKSK 694
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 7/177 (3%)
Query: 57 NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH 116
N ++T+VI GL K G EA + S+M+ S PN+VT L + G+++ K+V
Sbjct: 716 NEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVE 774
Query: 117 -RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV----VSWSSMIVGFAM 171
A G L N N LI + + G +EE + M V +++++MI
Sbjct: 775 LHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCR 834
Query: 172 HXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVP 228
M G++P+ V + ++H C G + K L M R G++P
Sbjct: 835 RNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQ-GLIP 890
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 176/409 (43%), Gaps = 41/409 (10%)
Query: 26 DIATWNIMIAHLINVGYVGAAR-DLFSSMPQRNVRSWTSVIYGLAKC----GMCEEALKV 80
D T I+I L G ++F M ++ V+ V GL K G+ EEAL +
Sbjct: 307 DNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVI 366
Query: 81 FSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMY-- 138
+EMEK G + N + ++ A + +E + + + G + N L+D Y
Sbjct: 367 QTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYAR 426
Query: 139 -VKCGCLEEGYRVFEGM-RERTVVSWSSMIVGFA-MHXXXXXXXXXXXXMIRVGMKPNYV 195
++ +E R E + E V S++ +I + M +VG+KP+
Sbjct: 427 RMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSH 486
Query: 196 TFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRA---GRLEEAREV 252
++ ++HA S G +K A M ++ GI P VE Y ++D R+ G+L E ++
Sbjct: 487 SYTALIHAYSVSGWHEKAYASFEEMCKE-GIKPSVETYTSVLDAFRRSGDTGKLMEIWKL 545
Query: 253 IANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLND-GYYVVMSNVYAEAGK 311
+ + R+ + LL G + A + + SK+ L Y ++ N YA G+
Sbjct: 546 MLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQ 605
Query: 312 WEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKM 371
++ ++ + M + +K SIT +++ FV + F + K++VK
Sbjct: 606 DAKLPQLLKEMAALNLKP----DSITYSTMIYAFV---RVRDFKRAFF--YHKMMVK--- 653
Query: 372 KGYIPDT------SVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPG 414
G +PD +L D K ++ +K A++ G+IN+K G
Sbjct: 654 SGQVPDPRSYEKLRAILEDKAKTKNRK-------DKTAIL-GIINSKFG 694
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 155/365 (42%), Gaps = 23/365 (6%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRD----IATWNIMIAHLINVGYVGAARDLFSSMPQR- 56
+L G+ + A + D+M QRD + T+ I+I VG A L M R
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRG 269
Query: 57 ---NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGK 113
+V ++ ++ G+ K G +EA+K ++M G +PN +T +L + G +
Sbjct: 270 CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAE 329
Query: 114 SVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER----TVVSWSSMIVGF 169
+ GF +V N LI+ + G L + E M + +S++ ++ GF
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389
Query: 170 AMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPG 229
M+ G P+ VT+ +L A G V+ +L + G P
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK-GCSPV 448
Query: 230 VEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNRVVWGALLGGCRLHKNIVLAEEAMR 286
+ Y ++D L++AG+ +A +++ M + P+ + + +L+GG + +EA++
Sbjct: 449 LITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV---DEAIK 505
Query: 287 HLSKLDLLN-DGYYVVMSNVYAEAGKWEEVSR---IRRLMKSRGVKKTPGCSSITIDGVV 342
+ + + V +++ K + R M +RG K +I I+G+
Sbjct: 506 FFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLA 565
Query: 343 HEFVA 347
+E +A
Sbjct: 566 YEGMA 570
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 103/247 (41%), Gaps = 9/247 (3%)
Query: 18 MFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQR----NVRSWTSVIYGLAKCGM 73
M K + T+NI+I L G +G A D+ MPQ N S+ +++G K
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 74 CEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNA 133
+ A++ M G P+ VT +L A + G +E + G + N
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 134 LIDMYVKCGCLEEGYRVFEGMRERTV----VSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
+ID K G + ++ + MR + + +++SS++ G + R+G
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
++PN VTF ++ D+ L M + G P Y L++ L+ G +EA
Sbjct: 515 IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFM-INRGCKPNETSYTILIEGLAYEGMAKEA 573
Query: 250 REVIANM 256
E++ +
Sbjct: 574 LELLNEL 580
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 148/387 (38%), Gaps = 55/387 (14%)
Query: 2 LLHLYASCGETRHARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMP-QR 56
L+ + G+TR A + + + D+ T+N+MI+ G + A + M
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSP 202
Query: 57 NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH 116
+V ++ +++ L G ++A++V M + P+ +T ++ A + + +
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262
Query: 117 RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXX 176
+ G +V N L++ K G L+E + M
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS------------------- 303
Query: 177 XXXXXXXXMIRVGMKPNYVTFIGVLHA-CSHVGLVDKGRALLTIMRRDYGIVPGVEHYGC 235
G +PN +T +L + CS +D + L ++R+ G P V +
Sbjct: 304 ------------GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK--GFSPSVVTFNI 349
Query: 236 LVDLLSRAGRLEEAREVIANMS---VPPNRVVWGALLGG-CRLHKNIVLAEEAMRHLSKL 291
L++ L R G L A +++ M PN + + LL G C+ K E R +S+
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 292 DLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDET 351
+ Y M + GK E+ I + S+G + IDG+ G
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG--- 466
Query: 352 HPQAKGIFEMWEKLLVKMKMKGYIPDT 378
K I KLL +M+ K PDT
Sbjct: 467 ----KAI-----KLLDEMRAKDLKPDT 484
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 84/206 (40%), Gaps = 5/206 (2%)
Query: 68 LAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRN 127
+ + G EE K M G+ P+ + ++ +LG + +G+G + +
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 128 VYVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI 186
V N +I Y K G + V + M VV++++++ M+
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 187 RVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRL 246
+ P+ +T+ ++ A V LL M RD G P V Y LV+ + + GRL
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM-RDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 247 EEAREVIANMSVP---PNRVVWGALL 269
+EA + + +M PN + +L
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIIL 316
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 104/246 (42%), Gaps = 18/246 (7%)
Query: 38 INVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK-----PN 92
++ G + R +F MP R+ SW V G + G E+A +F M K K P+
Sbjct: 134 VSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPS 193
Query: 93 EVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL--RNVYVCNALIDMYVKCGCLEEGYRV 150
+ + VL ACA + D E GK VH GF+ + Y+ +LI Y + CLE+ V
Sbjct: 194 WI-LGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLV 252
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
+ V+W++ + M G+K N F VL ACS V
Sbjct: 253 LHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVS-- 310
Query: 211 DKGRALLTIMRRDYGIVPGVEHYGC-----LVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
D GR+ + I G E C L+++ + G++++A +V + + W
Sbjct: 311 DGGRSGQQVHAN--AIKLGFES-DCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCW 367
Query: 266 GALLGG 271
A++
Sbjct: 368 NAMVAS 373
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 53 MPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDL-EF 111
+ N +W + + + G +E ++ F EM G K N VL AC+ + D
Sbjct: 256 LSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRS 315
Query: 112 GKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVS-WSSMIVGF 169
G+ VH A GF + + LI+MY K G +++ +VF+ ++ T VS W++M+ +
Sbjct: 316 GQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASY 374
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 146/336 (43%), Gaps = 17/336 (5%)
Query: 18 MFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQR----NVRSWTSVIYGLAKCGM 73
M +K + ++ T+N +I L N G A L S M +R NV +++++I K G
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
Query: 74 CEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNA 133
EA K++ EM K P+ T +++ L+ K + NV N
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 134 LIDMYVKCGCLEEGYRVFEGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
LI + K +EEG +F M +R V+++++I G M+ G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
+ P+ +T+ +L G ++K + +++ + P + Y +++ + +AG++E+
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS-KMEPDIYTYNIMIEGMCKAGKVEDG 519
Query: 250 REVIANMS---VPPNRVVWGALLGG-CRLHKNIVLAEEAMRHLSKLD--LLNDGYYVVMS 303
++ ++S V PN +++ ++ G CR K + +A+ K D L N G Y +
Sbjct: 520 WDLFCSLSLKGVKPNVIIYTTMISGFCR--KGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Query: 304 NVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITID 339
G + + + M+S G S+ I+
Sbjct: 578 RARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 104/251 (41%), Gaps = 40/251 (15%)
Query: 14 HARLMFDKMPQRD----IATWNIMIAHLINVGYVGAARDLFSSMPQR----NVRSWTSVI 65
A+ MF+ M +D + T+N +I V +LF M QR N ++ ++I
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 66 YGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL 125
GL + G C+ A K+F +M DG P+ +T +L + G LE V + + +
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 126 RNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM 185
++Y N +I+ K G +E+G+ +F + +
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK---------------------------- 529
Query: 186 IRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGR 245
G+KPN + + ++ GL ++ AL M+ D G +P Y L+ R G
Sbjct: 530 ---GVKPNVIIYTTMISGFCRKGLKEEADALFREMKED-GTLPNSGTYNTLIRARLRDGD 585
Query: 246 LEEAREVIANM 256
+ E+I M
Sbjct: 586 KAASAELIKEM 596
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 134/332 (40%), Gaps = 22/332 (6%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
V +F Q N ++ ++I+GL EA+ + M G +P+ T V+
Sbjct: 170 VALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNG 229
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER----T 158
+ GD++ S+ + + +V + +ID + + +F M +
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 159 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVG-LVDKGRALL 217
VV+++S+I + MI + PN VTF ++ A G LV+ +
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 218 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAR---EVIANMSVPPNRVVWGALLGGCRL 274
+++R I P + Y L++ RL+EA+ E++ + PN V + L+ G
Sbjct: 350 EMIKR--SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Query: 275 HKNIVLAEEAMRHLSKLDLL-NDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGC 333
K + E R +S+ L+ N Y + +AG + +I + M S GV
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467
Query: 334 SSITIDG-----------VVHEFVAGDETHPQ 354
SI +DG VV E++ + P
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 143/343 (41%), Gaps = 51/343 (14%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDI----ATWNIMIAHLINVGYVGAARDLFSSMPQR- 56
L+H Y G+ A L+FD + DI T+N +I L G + A+ L M +
Sbjct: 380 LMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQL 439
Query: 57 ---NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGK 113
+V ++T+++ G K G A +V+ EM + G KP+ V +LGD +
Sbjct: 440 IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAF 499
Query: 114 SVH-RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMH 172
+H + ++ + N ID K G L + E R+
Sbjct: 500 RLHEEMVATDHHAPDLTIYNVRIDGLCKVGNL---VKAIEFQRK---------------- 540
Query: 173 XXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEH 232
+ RVG+ P++VT+ V+ G R L M R + P V
Sbjct: 541 ------------IFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK-RLYPSVIT 587
Query: 233 YGCLVDLLSRAGRLEEAREVIANMS---VPPNRVVWGALLGGCRLHKNIVLAEEAMRHLS 289
Y L+ ++AGRLE+A + M V PN + ALL G NI +EA R+L
Sbjct: 588 YFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNI---DEAYRYLC 644
Query: 290 KLD----LLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVK 328
K++ N Y ++ + + KWEEV ++ + M + ++
Sbjct: 645 KMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIE 687
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 128/314 (40%), Gaps = 53/314 (16%)
Query: 28 ATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKD 87
+T+NI I L + G + AR+L SSM +V S+ ++++G K G EA +F ++
Sbjct: 344 STYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAG 403
Query: 88 GSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEG 147
P+ VT N LID + G LE
Sbjct: 404 DIHPSIVTY-----------------------------------NTLIDGLCESGNLEGA 428
Query: 148 YRVFEGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
R+ E M + V+++++++ GF + M+R G+KP+ +
Sbjct: 429 QRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVG 488
Query: 204 CSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV---IANMSVPP 260
+G DK L M P + Y +D L + G L +A E I + + P
Sbjct: 489 ELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVP 548
Query: 261 NRVVWGALL------GGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEE 314
+ V + ++ G ++ +N L +E +R ++ Y V+ +A+AG+ E+
Sbjct: 549 DHVTYTTVIRGYLENGQFKMARN--LYDEMLRKRLYPSVIT---YFVLIYGHAKAGRLEQ 603
Query: 315 VSRIRRLMKSRGVK 328
+ MK RGV+
Sbjct: 604 AFQYSTEMKKRGVR 617
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 126/293 (43%), Gaps = 12/293 (4%)
Query: 17 LMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMPQR----NVRSWTSVIYGL 68
L F+KM ++ + NI++ L + + A ++ +M + V ++ +++
Sbjct: 189 LSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSC 248
Query: 69 AKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNV 128
K G E K++ EM++ + +EVT ++ ++ G +E + H + +GF
Sbjct: 249 FKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTP 308
Query: 129 YVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRV 188
Y N LI+ Y K G ++ + V + M + +S + ++
Sbjct: 309 YSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSS 368
Query: 189 GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEE 248
P+ V++ ++H +G + L +R I P + Y L+D L +G LE
Sbjct: 369 MAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAG-DIHPSIVTYNTLIDGLCESGNLEG 427
Query: 249 AREVIANMS---VPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY 298
A+ + M+ + P+ + + L+ G + N+ +A E + + + DGY
Sbjct: 428 AQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGY 480
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 146/354 (41%), Gaps = 56/354 (15%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVR----SWTSVIYGLAKCGMCEEALK 79
+ D+ +N +I L ++ A +LF+ M + +R +++S+I L G +A +
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 80 VFSEMEKDGSKPNEVTVVAVLVACAQLGDL-EFGKSVHRFAKG-------------NGF- 124
+ S+M + PN VT A++ A + G L E K K NGF
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374
Query: 125 --------------------LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER----TVV 160
NV + LI + K +EEG +F M +R V
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
+++++I GF M+ VG+ PN +T+ +L G + K + +
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS---VPPNRVVWGALLGG-CRLHK 276
+R + P + Y +++ + +AG++E+ E+ N+S V PN + + ++ G CR
Sbjct: 495 QRS-TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGS 553
Query: 277 NIVLAEEAMRHLSKLD----LLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRG 326
EEA L K+ L N G Y + G E + + + M+S G
Sbjct: 554 K----EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCG 603
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 147/351 (41%), Gaps = 36/351 (10%)
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
++T++I+GL EA+ + +M + G +P+ VT V+ + GD++ S+ +
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM 249
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER----TVVSWSSMIVGFAMHXXX 175
+ +V + N +ID K +++ +F M + V ++SS+I +
Sbjct: 250 EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 309
Query: 176 XXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVG-LVDKGRALLTIMRRDYGIVPGVEHYG 234
MI + PN VTF ++ A G LV+ + +++R I P + Y
Sbjct: 310 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR--SIDPDIFTYS 367
Query: 235 CLVDLLSRAGRLEEAR---EVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL 291
L++ RL+EA+ E++ + PN V + L+ G K + E R +S+
Sbjct: 368 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQR 427
Query: 292 DLL-NDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDG---------- 340
L+ N Y + + + +A + + + M S GV +I +DG
Sbjct: 428 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 487
Query: 341 -VVHEFVAGDETHP-------------QAKGIFEMWEKLLVKMKMKGYIPD 377
VV E++ P +A + + WE L + +KG P+
Sbjct: 488 MVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWE-LFCNLSLKGVSPN 537
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 114/267 (42%), Gaps = 13/267 (4%)
Query: 2 LLHLYASCGETRHARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMPQR- 56
L+ + G+ A ++D+M +R DI T++ +I + A+ +F M +
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 393
Query: 57 ---NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGK 113
NV +++++I G K EE +++F EM + G N VT ++ Q D + +
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453
Query: 114 SVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERT----VVSWSSMIVGF 169
V + G N+ N L+D K G L + VFE ++ T + +++ MI G
Sbjct: 454 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 513
Query: 170 AMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPG 229
+ G+ PN + + ++ G ++ +LL M+ D G +P
Sbjct: 514 CKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED-GPLPN 572
Query: 230 VEHYGCLVDLLSRAGRLEEAREVIANM 256
Y L+ R G E + E+I M
Sbjct: 573 SGTYNTLIRARLRDGDREASAELIKEM 599
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 123/290 (42%), Gaps = 33/290 (11%)
Query: 75 EEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNAL 134
++A+ +F +M K P+ V +L A A++ E S+ + G ++Y +
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 135 IDMYVKCGCLEEGYRVFEGMR----ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGM 190
I+ + + L V M E +V+ SS++ G+ M+ +G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 191 KPNYVTFIGVLH-------ACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRA 243
KP+ TF ++H A V LVD+ +++R G P + YG +V+ L +
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQ------MVQR--GCQPDLVTYGTVVNGLCKR 236
Query: 244 GRLEEAREVIANMS---VPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG--- 297
G ++ A ++ M + + V++ ++ G +K++ ++A+ +++D N G
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHM---DDALNLFTEMD--NKGIRP 291
Query: 298 ---YYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHE 344
Y + + G+W + SR+ M R + S ID V E
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 125/324 (38%), Gaps = 58/324 (17%)
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
S+ ++I G +EA EM K G KP+ T ++ + +E
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 601
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV----VSWSSMIVGFAMHXXX 175
K NG L +VY + +ID K EEG F+ M + V V ++ +I +
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 176 XXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGC 235
M G+ PN T+ ++ S + V++ + L MR + G+ P V HY
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTA 720
Query: 236 LVDLLSRAGRLEEAREVIANM---SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLD 292
L+D + G++ + ++ M +V PN++ + ++GG
Sbjct: 721 LIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG--------------------- 759
Query: 293 LLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITID----------GVV 342
YA G E SR+ M+ +G+ P SIT GV+
Sbjct: 760 -------------YARDGNVTEASRLLNEMREKGI--VP--DSITYKEFIYGYLKQGGVL 802
Query: 343 HEFVAGDETHPQAKGIFEMWEKLL 366
F DE + A I E W KL+
Sbjct: 803 EAFKGSDEENYAA--IIEGWNKLI 824
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 147/368 (39%), Gaps = 60/368 (16%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQR----NVRSWTSVIYGLAKCGMCEEALKVF 81
D+ + I G V A LFS M + NV ++ +VI GL CG +EA
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 82 SEMEKDGSKPNEVT---VVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMY 138
+M + G +P +T +V L ++GD F V + GF NV V N LID +
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYF---VLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 139 VKCGCLEEGYRVFEGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNY 194
++ G L + + + M + T +++++I G+ + M+ +G N
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 195 VTFIGVL-HACSHVGL--------------VDKGRALLTIMRR----------------- 222
+F V+ CSH+ + G LLT +
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 223 --DYGIVPGVEHYGCLVDLLSRAGRLEEA----REVIANMSVPPNRVVWGALLGGC---- 272
+ G V L+ L AG+L+EA +E++ V +RV + L+ GC
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCV-MDRVSYNTLISGCCGKK 554
Query: 273 RLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPG 332
+L + + +E ++ K D N Y +++ ++ K EE + K G+
Sbjct: 555 KLDEAFMFLDEMVKRGLKPD--NYTYSILICGLF-NMNKVEEAIQFWDDCKRNGMLPDVY 611
Query: 333 CSSITIDG 340
S+ IDG
Sbjct: 612 TYSVMIDG 619
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 161/409 (39%), Gaps = 60/409 (14%)
Query: 17 LMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMP----QRNVRSWTSVIYGLAKCG 72
LM K +T+N +I G A L M N S+TSVI L
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449
Query: 73 MCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCN 132
M + AL+ EM P + ++ + G + GF+ + N
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 509
Query: 133 ALIDMYVKCGCLEEGYRVFEGMRERTV----VSWSSMIVGFAMHXXXXXXXXXXXXMIRV 188
AL+ + G L+E +R+ + + R VS++++I G M++
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 189 GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEE 248
G+KP+ T+ ++ ++ V++ +R+ G++P V Y ++D +A R EE
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN-GMLPDVYTYSVMIDGCCKAERTEE 628
Query: 249 AREVIANM---SVPPNRVVWGALLGG-CRLHKNIVLAE--EAMRH--------------- 287
+E M +V PN VV+ L+ CR + + E E M+H
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 288 ----LSKLD---LL-----------NDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKK 329
+S+++ LL N +Y + + Y + G+ +V + R M S+ V
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 330 TPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDT 378
++ I G + G+ T +LL +M+ KG +PD+
Sbjct: 749 NKITYTVMIGGYARD---GNVTEAS---------RLLNEMREKGIVPDS 785
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 127/314 (40%), Gaps = 24/314 (7%)
Query: 74 CEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRF-AKGNGFLRNVYVCN 132
C AL VF + G P++ T +L + + EF K F G +VY+
Sbjct: 207 CYLALDVFPVLANKGMFPSKTTCNILLTSLVRAN--EFQKCCEAFDVVCKGVSPDVYLFT 264
Query: 133 ALIDMYVKCGCLEEGYRVFEGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRV 188
I+ + K G +EE ++F M E VV+++++I G M M+
Sbjct: 265 TAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVER 324
Query: 189 GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEE 248
GM+P +T+ ++ + + +L M + G P V Y L+D AG L +
Sbjct: 325 GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK-GFPPNVIVYNNLIDSFIEAGSLNK 383
Query: 249 A---REVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDL-LNDGYYVVMSN 304
A ++++ + + + L+ G + AE ++ + + +N G + +
Sbjct: 384 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 443
Query: 305 VYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEK 364
+ ++ R M R + +PG G++ ++G H + E+W +
Sbjct: 444 LLCSHLMFDSALRFVGEMLLRNM--SPG------GGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 365 LLVKMKMKGYIPDT 378
L KG++ DT
Sbjct: 496 FL----NKGFVVDT 505
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 8/180 (4%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSV----IYGLAKCGMCEEALKVF 81
D+ T+++MI ++ F M +NV+ T V I + G AL++
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668
Query: 82 SEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKC 141
+M+ G PN T +++ + + +E K + + G NV+ ALID Y K
Sbjct: 669 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 728
Query: 142 GCLEEGYRVFEGMRERTV----VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTF 197
G + + + M + V ++++ MI G+A M G+ P+ +T+
Sbjct: 729 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 125/324 (38%), Gaps = 58/324 (17%)
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
S+ ++I G +EA EM K G KP+ T ++ + +E
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 601
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV----VSWSSMIVGFAMHXXX 175
K NG L +VY + +ID K EEG F+ M + V V ++ +I +
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 176 XXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGC 235
M G+ PN T+ ++ S + V++ + L MR + G+ P V HY
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTA 720
Query: 236 LVDLLSRAGRLEEAREVIANM---SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLD 292
L+D + G++ + ++ M +V PN++ + ++GG
Sbjct: 721 LIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG--------------------- 759
Query: 293 LLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITID----------GVV 342
YA G E SR+ M+ +G+ P SIT GV+
Sbjct: 760 -------------YARDGNVTEASRLLNEMREKGI--VP--DSITYKEFIYGYLKQGGVL 802
Query: 343 HEFVAGDETHPQAKGIFEMWEKLL 366
F DE + A I E W KL+
Sbjct: 803 EAFKGSDEENYAA--IIEGWNKLI 824
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 147/368 (39%), Gaps = 60/368 (16%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQR----NVRSWTSVIYGLAKCGMCEEALKVF 81
D+ + I G V A LFS M + NV ++ +VI GL CG +EA
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 82 SEMEKDGSKPNEVT---VVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMY 138
+M + G +P +T +V L ++GD F V + GF NV V N LID +
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYF---VLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 139 VKCGCLEEGYRVFEGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNY 194
++ G L + + + M + T +++++I G+ + M+ +G N
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 195 VTFIGVL-HACSHVGL--------------VDKGRALLTIMRR----------------- 222
+F V+ CSH+ + G LLT +
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 223 --DYGIVPGVEHYGCLVDLLSRAGRLEEA----REVIANMSVPPNRVVWGALLGGC---- 272
+ G V L+ L AG+L+EA +E++ V +RV + L+ GC
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCV-MDRVSYNTLISGCCGKK 554
Query: 273 RLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPG 332
+L + + +E ++ K D N Y +++ ++ K EE + K G+
Sbjct: 555 KLDEAFMFLDEMVKRGLKPD--NYTYSILICGLF-NMNKVEEAIQFWDDCKRNGMLPDVY 611
Query: 333 CSSITIDG 340
S+ IDG
Sbjct: 612 TYSVMIDG 619
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 161/409 (39%), Gaps = 60/409 (14%)
Query: 17 LMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMP----QRNVRSWTSVIYGLAKCG 72
LM K +T+N +I G A L M N S+TSVI L
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449
Query: 73 MCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCN 132
M + AL+ EM P + ++ + G + GF+ + N
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 509
Query: 133 ALIDMYVKCGCLEEGYRVFEGMRERTV----VSWSSMIVGFAMHXXXXXXXXXXXXMIRV 188
AL+ + G L+E +R+ + + R VS++++I G M++
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 189 GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEE 248
G+KP+ T+ ++ ++ V++ +R+ G++P V Y ++D +A R EE
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN-GMLPDVYTYSVMIDGCCKAERTEE 628
Query: 249 AREVIANM---SVPPNRVVWGALLGG-CRLHKNIVLAE--EAMRH--------------- 287
+E M +V PN VV+ L+ CR + + E E M+H
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 288 ----LSKLD---LL-----------NDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKK 329
+S+++ LL N +Y + + Y + G+ +V + R M S+ V
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 330 TPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDT 378
++ I G + G+ T +LL +M+ KG +PD+
Sbjct: 749 NKITYTVMIGGYARD---GNVTEAS---------RLLNEMREKGIVPDS 785
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 127/314 (40%), Gaps = 24/314 (7%)
Query: 74 CEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRF-AKGNGFLRNVYVCN 132
C AL VF + G P++ T +L + + EF K F G +VY+
Sbjct: 207 CYLALDVFPVLANKGMFPSKTTCNILLTSLVRAN--EFQKCCEAFDVVCKGVSPDVYLFT 264
Query: 133 ALIDMYVKCGCLEEGYRVFEGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRV 188
I+ + K G +EE ++F M E VV+++++I G M M+
Sbjct: 265 TAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVER 324
Query: 189 GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEE 248
GM+P +T+ ++ + + +L M + G P V Y L+D AG L +
Sbjct: 325 GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK-GFPPNVIVYNNLIDSFIEAGSLNK 383
Query: 249 A---REVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDL-LNDGYYVVMSN 304
A ++++ + + + L+ G + AE ++ + + +N G + +
Sbjct: 384 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 443
Query: 305 VYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEK 364
+ ++ R M R + +PG G++ ++G H + E+W +
Sbjct: 444 LLCSHLMFDSALRFVGEMLLRNM--SPG------GGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 365 LLVKMKMKGYIPDT 378
L KG++ DT
Sbjct: 496 FL----NKGFVVDT 505
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 8/180 (4%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSV----IYGLAKCGMCEEALKVF 81
D+ T+++MI ++ F M +NV+ T V I + G AL++
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668
Query: 82 SEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKC 141
+M+ G PN T +++ + + +E K + + G NV+ ALID Y K
Sbjct: 669 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 728
Query: 142 GCLEEGYRVFEGMRERTV----VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTF 197
G + + + M + V ++++ MI G+A M G+ P+ +T+
Sbjct: 729 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 146/349 (41%), Gaps = 30/349 (8%)
Query: 18 MFDKMPQR---DIATWNIMIAHLINVGYVGAARDLFSSMPQR----NVRSWTSVIYGLAK 70
+F+ M Q ++T++ I + V A +++ S+P NV S++ L K
Sbjct: 120 LFEWMQQHGKISVSTYSSCIK-FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVK 178
Query: 71 CGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK--GNGFLRNV 128
G + +K+F +M++DG KP+ VT +L C ++ + + K++ + NG +
Sbjct: 179 NGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKN-GYPKAIELIGELPHNGIQMDS 237
Query: 129 YVCNALIDMYVKCGCLEEGYRVFEGMR----ERTVVSWSSMIVGFAMHXXXXXXXXXXXX 184
+ ++ + G EE + M+ + +SS++ ++
Sbjct: 238 VMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTE 297
Query: 185 MIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAG 244
M +G+ PN V +L GL D+ R LL+ + G Y L+D LS+AG
Sbjct: 298 MKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSEL-ESAGYAENEMPYCMLMDGLSKAG 356
Query: 245 RLEEAREVIANMSVP-------PNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDL--LN 295
+LEEAR + +M N ++ AL R + L+ ++ K DL LN
Sbjct: 357 KLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLN 416
Query: 296 DGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHE 344
M Y AG+ E V R+ + M + V I I + E
Sbjct: 417 -----TMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKE 460
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 9/231 (3%)
Query: 54 PQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGK 113
P NV ++ ++I G K G + A +F ME+ G +P+ + ++ + G L G
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 114 SVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR----ERTVVSWSSMIVGF 169
+ A G +V V ++ ID+YVK G L V++ M VV+++ +I G
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 170 AMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPG 229
+++ GM+P+ VT+ ++ G + G AL M + G P
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK-MGYPPD 460
Query: 230 VEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNRVVWGALLGG-CRLHK 276
V YG LVD LS+ G + A M S+ N VV+ +L+ G CRL++
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 140/350 (40%), Gaps = 25/350 (7%)
Query: 2 LLHLYASCGETRHARLMFDKMPQ----RDIATWNIMIAHLINVGYVGAARDLFSSMPQRN 57
L+ + CG R +++ M + D+ + +++ L G + A M ++
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491
Query: 58 VR----SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL-------VACAQL 106
+R + S+I G + +EALKVF M G KP+ T V+ C +
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHM 551
Query: 107 GDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVF----EGMRERTVVSW 162
G + + N ++ VCN +I + KC +E+ + F EG E +V++
Sbjct: 552 KP-TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTY 610
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR 222
++MI G+ + PN VT ++H +D + +IM
Sbjct: 611 NTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIM-A 669
Query: 223 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS---VPPNRVVWGALLGGCRLHKNIV 279
+ G P YGCL+D S++ +E + ++ M + P+ V + ++ G +
Sbjct: 670 EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 729
Query: 280 LAEEAMRHLSKLDLLNDGY-YVVMSNVYAEAGKWEEVSRIRRLMKSRGVK 328
A LL D Y ++ Y + G+ E + + M GVK
Sbjct: 730 EATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 779
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 132/310 (42%), Gaps = 18/310 (5%)
Query: 41 GYVGAARDLFSSMPQRNVR----SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTV 96
G V A D + +R R S V+ GL+ E A ++ S + G PN VT
Sbjct: 231 GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTF 289
Query: 97 VAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRE 156
++ + G+++ + + + G ++ + LID Y K G L G+++F
Sbjct: 290 CTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH 349
Query: 157 R----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDK 212
+ VV +SS I + M+ G+ PN VT+ ++ G + +
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 213 GRALL-TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA---REVIANMSVPPNRVVWGAL 268
+ I++R G+ P + Y L+D + G L E + M PP+ V++G L
Sbjct: 410 AFGMYGQILKR--GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVL 467
Query: 269 LGGCRLHKNIVLAEE-AMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGV 327
+ G ++ A +++ L + LN + + + + +++E ++ RLM G+
Sbjct: 468 VDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Query: 328 KKTPGCSSIT 337
K P ++ T
Sbjct: 528 K--PDVATFT 535
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 12/205 (5%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQ----RDIATWNIMIAHLINVGYVGAARDLFSSMPQR 56
+++HL C A F+ + + DI T+N MI ++ + A +F +
Sbjct: 577 VVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVT 636
Query: 57 ----NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG 112
N + T +I+ L K + A+++FS M + GSKPN VT ++ ++ D+E
Sbjct: 637 PFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGS 696
Query: 113 KSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER----TVVSWSSMIVG 168
+ + G ++ + +ID K G ++E +F + VV+++ +I G
Sbjct: 697 FKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRG 756
Query: 169 FAMHXXXXXXXXXXXXMIRVGMKPN 193
+ M+R G+KP+
Sbjct: 757 YCKVGRLVEAALLYEHMLRNGVKPD 781
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 9/231 (3%)
Query: 54 PQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGK 113
P NV ++ ++I G K G + A +F ME+ G +P+ + ++ + G L G
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 114 SVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR----ERTVVSWSSMIVGF 169
+ A G +V V ++ ID+YVK G L V++ M VV+++ +I G
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 170 AMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPG 229
+++ GM+P+ VT+ ++ G + G AL M + G P
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK-MGYPPD 460
Query: 230 VEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNRVVWGALLGG-CRLHK 276
V YG LVD LS+ G + A M S+ N VV+ +L+ G CRL++
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 118/282 (41%), Gaps = 9/282 (3%)
Query: 55 QRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKS 114
+ +V ++T+V+ G EEAL +F M K G +P+ + ++ A + G
Sbjct: 528 KPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQ 587
Query: 115 VHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVF----EGMRERTVVSWSSMIVGFA 170
+ + N ++ VCN +I + KC +E+ + F EG E +V++++MI G+
Sbjct: 588 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 647
Query: 171 MHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGV 230
+ PN VT ++H +D + +IM + G P
Sbjct: 648 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIM-AEKGSKPNA 706
Query: 231 EHYGCLVDLLSRAGRLEEAREVIANMS---VPPNRVVWGALLGGCRLHKNIVLAEEAMRH 287
YGCL+D S++ +E + ++ M + P+ V + ++ G + A
Sbjct: 707 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 766
Query: 288 LSKLDLLNDGY-YVVMSNVYAEAGKWEEVSRIRRLMKSRGVK 328
LL D Y ++ Y + G+ E + + M GVK
Sbjct: 767 AIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 808
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 132/310 (42%), Gaps = 18/310 (5%)
Query: 41 GYVGAARDLFSSMPQRNVR----SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTV 96
G V A D + +R R S V+ GL+ E A ++ S + G PN VT
Sbjct: 231 GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTF 289
Query: 97 VAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRE 156
++ + G+++ + + + G ++ + LID Y K G L G+++F
Sbjct: 290 CTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH 349
Query: 157 R----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDK 212
+ VV +SS I + M+ G+ PN VT+ ++ G + +
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 213 GRALL-TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA---REVIANMSVPPNRVVWGAL 268
+ I++R G+ P + Y L+D + G L E + M PP+ V++G L
Sbjct: 410 AFGMYGQILKR--GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVL 467
Query: 269 LGGCRLHKNIVLAEE-AMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGV 327
+ G ++ A +++ L + LN + + + + +++E ++ RLM G+
Sbjct: 468 VDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Query: 328 KKTPGCSSIT 337
K P ++ T
Sbjct: 528 K--PDVATFT 535
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 116/283 (40%), Gaps = 16/283 (5%)
Query: 2 LLHLYASCGETRHARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMPQRN 57
L++ + GE A +F M QR D+ ++ +I G +G LFS +
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 58 VR----SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGK 113
V+ ++S I K G A V+ M G PN VT ++ Q G +
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
Query: 114 SVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRE----RTVVSWSSMIVGF 169
++ G ++ ++LID + KCG L G+ ++E M + VV + ++ G
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471
Query: 170 AMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPG 229
+ M+ ++ N V F ++ + D+ + +M YGI P
Sbjct: 472 SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI-YGIKPD 530
Query: 230 VEHYGCLVDLLSRAGRLEEAREV---IANMSVPPNRVVWGALL 269
V + ++ + GRLEEA + + M + P+ + + L+
Sbjct: 531 VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLI 573