Miyakogusa Predicted Gene

Lj0g3v0250919.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0250919.1 Non Chatacterized Hit- tr|I1LBZ4|I1LBZ4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,75.29,0,LEA_2,Late
embryogenesis abundant protein, LEA-14; seg,NULL; FAMILY NOT
NAMED,NULL,CUFF.16431.1
         (254 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G54540.1 | Symbols:  | Late embryogenesis abundant (LEA) hydr...   173   9e-44
AT5G36970.1 | Symbols: NHL25 | NDR1/HIN1-like 25 | chr5:14604367...   169   2e-42
AT1G65690.1 | Symbols:  | Late embryogenesis abundant (LEA) hydr...   149   1e-36
AT2G27080.2 | Symbols:  | Late embryogenesis abundant (LEA) hydr...    64   8e-11
AT2G27080.1 | Symbols:  | Late embryogenesis abundant (LEA) hydr...    64   8e-11
AT5G21130.1 | Symbols:  | Late embryogenesis abundant (LEA) hydr...    54   1e-07

>AT1G54540.1 | Symbols:  | Late embryogenesis abundant (LEA)
           hydroxyproline-rich glycoprotein family |
           chr1:20367702-20368421 REVERSE LENGTH=239
          Length = 239

 Score =  173 bits (439), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 93/193 (48%), Positives = 116/193 (60%)

Query: 62  RSYFCKCICWTXXXXXXXXXXXXXXXXXXXXXFKPKLPNYSVNSLRITDLRLNFDMSLYA 121
           R+  CK  CW                      F PKLP+Y VNSLR+T+L +N D+SL A
Sbjct: 47  RNMCCKIFCWVLSLLVIALIALAIAVAVVYFVFHPKLPSYEVNSLRVTNLGINLDLSLSA 106

Query: 122 KFDVKITADNPNXXXXXXXXXXXXLSVWYTKTMLCEGSLPQFYQGHQNRTVLNVALTGQV 181
           +F V+ITA NPN            + VWY KT LCEG +P+FYQGH+N T LNVALTG+ 
Sbjct: 107 EFKVEITARNPNEKIGIYYEKGGHIGVWYDKTKLCEGPIPRFYQGHRNVTKLNVALTGRA 166

Query: 182 QGGSTLMAALXXXXXTGRVPLDLNIHAPVAIXXXXXXXXXXXXXXXCQLVVDSLSSNNLI 241
           Q G+T++AAL     TGRVPLDL ++APVAI               C+LVVDSLS+NN I
Sbjct: 167 QYGNTVLAALQQQQQTGRVPLDLKVNAPVAIKLGNLKMKKIRILGSCKLVVDSLSTNNNI 226

Query: 242 SIKASNCKFRMKL 254
           +IKAS+C F+ KL
Sbjct: 227 NIKASDCSFKAKL 239


>AT5G36970.1 | Symbols: NHL25 | NDR1/HIN1-like 25 |
           chr5:14604367-14605194 REVERSE LENGTH=248
          Length = 248

 Score =  169 bits (428), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 92/255 (36%), Positives = 133/255 (52%), Gaps = 8/255 (3%)

Query: 1   MADPQRQRIHPVEVEARPPHPTAPLVPPGSFRSEKGNPVQVXXXXXXXXXXXXXXXXXXX 60
           M+D   Q+IHPV     PPHPTAPLVP GS RSE G+P +                    
Sbjct: 1   MSD--HQKIHPVSDPEAPPHPTAPLVPRGSSRSEHGDPTKTQQAAPLDPPREKKG----- 53

Query: 61  KRSYFCKCICWTXXXXXXXXXXXXXXXXXXXXXFKPKLPNYSVNSLRITDLRLNFDMSLY 120
            RS +C+C+C+T                     F+PK P+Y+++ L++T  +LN D+SL 
Sbjct: 54  SRSCWCRCVCYTLLVLFLLIVIVGAIVGILYLVFRPKFPDYNIDRLQLTRFQLNQDLSLS 113

Query: 121 AKFDVKITADNPNXXXXXXXXXXXXLSVWYTKTMLCEGSLPQFYQGHQNRTVLNVALTGQ 180
             F+V ITA NPN            +SV Y +T +  GSLP+FYQGH+N T++ V +TG 
Sbjct: 114 TAFNVTITAKNPNEKIGIYYEDGSKISVLYMQTRISNGSLPKFYQGHENTTIILVEMTGF 173

Query: 181 VQGGSTLMAALXXXXX-TGRVPLDLNIHAPVAIXXXXXXXXXXXXXXXCQLVVDSLSSNN 239
            Q  ++LM  L      TG +PL + +  PV I               C + VDSL++N+
Sbjct: 174 TQNATSLMTTLQEQQRLTGSIPLRIRVTQPVRIKLGKLKLMKVRFLVRCGVSVDSLAANS 233

Query: 240 LISIKASNCKFRMKL 254
           +I +++SNCK+R +L
Sbjct: 234 VIRVRSSNCKYRFRL 248


>AT1G65690.1 | Symbols:  | Late embryogenesis abundant (LEA)
           hydroxyproline-rich glycoprotein family |
           chr1:24431642-24432898 REVERSE LENGTH=252
          Length = 252

 Score =  149 bits (377), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/252 (37%), Positives = 128/252 (50%), Gaps = 4/252 (1%)

Query: 5   QRQRIHPVEV-EARPPHPTAPLVPPGSFRSEKGNPVQVXXXXXXXXXXXXXXXXXXXKRS 63
           Q Q+I+PV+  EA    PTAPLVP GS RSE G+P +V                      
Sbjct: 3   QHQKIYPVQDPEAATARPTAPLVPRGSSRSEHGDPSKVPLNQRPQRFVPLAPPKKRRSCC 62

Query: 64  YFCKCICWTXXXXXXXXXXXXXXXXXXXXXFKPKLPNYSVNSLRITDLRLNFDMSLYAKF 123
             C+C C+T                     FKPKLP+YS++ L++T   LN D SL   F
Sbjct: 63  --CRCFCYTFCFLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQDSSLTTAF 120

Query: 124 DVKITADNPNXXXXXXXXXXXXLSVWYTKTMLCEGSLPQFYQGHQNRTVLNVALTGQVQG 183
           +V ITA NPN            ++VWY +  L  GSLP+FYQGH+N TV+ V +TGQ Q 
Sbjct: 121 NVTITAKNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVEMTGQTQN 180

Query: 184 GSTLMAALXXXXX-TGRVPLDLNIHAPVAIXXXXXXXXXXXXXXXCQLVVDSLSSNNLIS 242
            S L   L      TG +PL + ++ PV +               C + VDSL++NN+I 
Sbjct: 181 ASGLRTTLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCGVFVDSLATNNVIK 240

Query: 243 IKASNCKFRMKL 254
           I++S+CKFR++L
Sbjct: 241 IQSSSCKFRLRL 252


>AT2G27080.2 | Symbols:  | Late embryogenesis abundant (LEA)
           hydroxyproline-rich glycoprotein family |
           chr2:11566383-11567165 FORWARD LENGTH=260
          Length = 260

 Score = 64.3 bits (155), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 2/156 (1%)

Query: 94  FKPKLPNYSVNSLRITDLRLNFDMSLYAKFDVKITADNPNXXXXXXXXXXXXLSVWYTKT 153
           ++P+ P YS+    ++ + LN    +   F+V + + N N            + V+Y   
Sbjct: 100 YRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDV 159

Query: 154 MLCEGSLPQFYQGHQNRTVLNVALTG-QVQGGSTLMAALXXXXXTGRVPLDLNIHAPVAI 212
            +  G +P FYQ  +N TV+ + L+G ++Q  S +   +        VP  L I APV I
Sbjct: 160 DISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKI 219

Query: 213 XXXXXXXXXXXXXXXCQLVVDSLSS-NNLISIKASN 247
                          C + VD L++ + ++S K S+
Sbjct: 220 KFGSVKTWTMIVNVDCDVTVDKLTAPSRIVSRKCSH 255


>AT2G27080.1 | Symbols:  | Late embryogenesis abundant (LEA)
           hydroxyproline-rich glycoprotein family |
           chr2:11566383-11567165 FORWARD LENGTH=260
          Length = 260

 Score = 64.3 bits (155), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 2/156 (1%)

Query: 94  FKPKLPNYSVNSLRITDLRLNFDMSLYAKFDVKITADNPNXXXXXXXXXXXXLSVWYTKT 153
           ++P+ P YS+    ++ + LN    +   F+V + + N N            + V+Y   
Sbjct: 100 YRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDV 159

Query: 154 MLCEGSLPQFYQGHQNRTVLNVALTG-QVQGGSTLMAALXXXXXTGRVPLDLNIHAPVAI 212
            +  G +P FYQ  +N TV+ + L+G ++Q  S +   +        VP  L I APV I
Sbjct: 160 DISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKI 219

Query: 213 XXXXXXXXXXXXXXXCQLVVDSLSS-NNLISIKASN 247
                          C + VD L++ + ++S K S+
Sbjct: 220 KFGSVKTWTMIVNVDCDVTVDKLTAPSRIVSRKCSH 255


>AT5G21130.1 | Symbols:  | Late embryogenesis abundant (LEA)
           hydroxyproline-rich glycoprotein family |
           chr5:7185968-7186813 FORWARD LENGTH=281
          Length = 281

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/189 (21%), Positives = 69/189 (36%), Gaps = 3/189 (1%)

Query: 67  KCICWTXXXXXXXXXXXXXXXXXXXXXFKPKLPNYSVNSLRITDLRLNFDMSLYAKFDVK 126
           +C+C++                     ++P  P +SV+ + +T + L           +K
Sbjct: 94  RCLCYSLSALLIIIVLAAIAFGFFYLVYQPHKPQFSVSGVSVTGINLTSSSPFSPVIRIK 153

Query: 127 ITADNPNXXXXXXXXXXXXLSVWYTKTMLCEGSLPQFYQGHQNRTVLNVALTG-QVQGGS 185
           + + N                V++  T L  G    F Q   N TV+   L G  V+  S
Sbjct: 154 LRSQNVKGKLGLIYEKGNEADVFFNGTKLGNGEFTAFKQPAGNVTVIVTVLKGSSVKLKS 213

Query: 186 TLMAALXXXXXTGRVPLDLNIHAPVAIXXXXXXXXXXXXXXXCQLVVDSLSSNNLISIKA 245
           +    L      G+VP  L I APV                 C++ VD L+++   ++K 
Sbjct: 214 SSRKELTESQKKGKVPFGLRIKAPVKFKVGSVTTWTMTITVDCKITVDKLTAS--ATVKT 271

Query: 246 SNCKFRMKL 254
            NC+  + L
Sbjct: 272 ENCETGLSL 280