Miyakogusa Predicted Gene
- Lj0g3v0250879.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0250879.1 Non Chatacterized Hit- tr|F0YG81|F0YG81_AURAN
Putative uncharacterized protein (Fragment)
OS=Aureoco,45.28,3e-19,DUF862,Domain of unknown function DUF862,
eukaryotic; UNCHARACTERIZED,NULL,CUFF.16427.1
(185 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G25680.1 | Symbols: | PPPDE putative thiol peptidase family ... 330 3e-91
AT4G25660.1 | Symbols: | PPPDE putative thiol peptidase family ... 329 7e-91
AT2G25190.1 | Symbols: | PPPDE putative thiol peptidase family ... 95 2e-20
AT1G80690.1 | Symbols: | PPPDE putative thiol peptidase family ... 90 8e-19
AT5G25170.1 | Symbols: | PPPDE putative thiol peptidase family ... 88 3e-18
AT4G31980.1 | Symbols: | unknown protein; CONTAINS InterPro DOM... 85 2e-17
AT5G47310.1 | Symbols: | PPPDE putative thiol peptidase family ... 84 4e-17
AT4G17486.1 | Symbols: | PPPDE putative thiol peptidase family ... 84 6e-17
AT4G17486.2 | Symbols: | PPPDE putative thiol peptidase family ... 82 3e-16
AT1G47740.2 | Symbols: | PPPDE putative thiol peptidase family ... 80 7e-16
AT1G47740.1 | Symbols: | PPPDE putative thiol peptidase family ... 80 7e-16
AT3G07090.1 | Symbols: | PPPDE putative thiol peptidase family ... 54 4e-08
>AT4G25680.1 | Symbols: | PPPDE putative thiol peptidase family
protein | chr4:13088425-13089952 FORWARD LENGTH=252
Length = 252
Score = 330 bits (847), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 151/184 (82%), Positives = 169/184 (91%)
Query: 1 MTDVMLHIYDVTNSGSEKTNSTIVQINKIFKDGIGLGGIFHSAVQVYGEEEWSFGYCEQG 60
MT+V+LHIYDVTNSGSEKTN+TIVQIN+ FKDGIGLGGIFHSA+QVYG +EWS+GYCE G
Sbjct: 1 MTEVVLHIYDVTNSGSEKTNNTIVQINRFFKDGIGLGGIFHSAIQVYGNDEWSYGYCELG 60
Query: 61 TGVFSCPSGKNPMYTYRECIILGKTSFSIFKVNQILRELSREWPGSSYDLLSKNCNHFCD 120
TGVFSCPSGKNPMYTYRE I+LGKT +IF VNQ+LRELSREWPG +YDLLSKNCNHFCD
Sbjct: 61 TGVFSCPSGKNPMYTYREKIVLGKTDCTIFMVNQMLRELSREWPGHTYDLLSKNCNHFCD 120
Query: 121 EFCERLGVPKLPGWVNRFANAGDTAMEVAGNTALRFRQAKTEIVSASKVAYRFLVGVTNN 180
C+RLGVPK+PGWVNRFANAGDTA+EVAGNTA+R +QAKTE+VSASKVAYRFL VT+N
Sbjct: 121 VLCDRLGVPKIPGWVNRFANAGDTALEVAGNTAMRMKQAKTELVSASKVAYRFLSNVTSN 180
Query: 181 VKTG 184
V G
Sbjct: 181 VTNG 184
>AT4G25660.1 | Symbols: | PPPDE putative thiol peptidase family
protein | chr4:13083677-13084989 FORWARD LENGTH=255
Length = 255
Score = 329 bits (843), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 150/184 (81%), Positives = 169/184 (91%)
Query: 1 MTDVMLHIYDVTNSGSEKTNSTIVQINKIFKDGIGLGGIFHSAVQVYGEEEWSFGYCEQG 60
M +V+LHIYDVTNSGSEKTN+TIVQIN+ FKDGIGLGGIFHSA+QVYG +EWS+GYCEQG
Sbjct: 1 MAEVVLHIYDVTNSGSEKTNNTIVQINRFFKDGIGLGGIFHSAIQVYGNDEWSYGYCEQG 60
Query: 61 TGVFSCPSGKNPMYTYRECIILGKTSFSIFKVNQILRELSREWPGSSYDLLSKNCNHFCD 120
TGVFSCPSGKNPMYTYRE I+LGKT +IF VNQILRELSREWPG +YDLLSKNCNHFCD
Sbjct: 61 TGVFSCPSGKNPMYTYREKIVLGKTDCTIFMVNQILRELSREWPGHTYDLLSKNCNHFCD 120
Query: 121 EFCERLGVPKLPGWVNRFANAGDTAMEVAGNTALRFRQAKTEIVSASKVAYRFLVGVTNN 180
C+RLGVPK+PGWVNRFA+AGDTA+EVAGNTA+R +QAKTE+VSASKVAYRFL VT+N
Sbjct: 121 VLCDRLGVPKIPGWVNRFAHAGDTALEVAGNTAMRVKQAKTELVSASKVAYRFLSNVTSN 180
Query: 181 VKTG 184
+ G
Sbjct: 181 ITNG 184
>AT2G25190.1 | Symbols: | PPPDE putative thiol peptidase family
protein | chr2:10734187-10735426 FORWARD LENGTH=240
Length = 240
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 81/143 (56%), Gaps = 6/143 (4%)
Query: 34 IGLGGIFHSAVQVYGEEEWSFGYCEQG-TGVFSCPSGKNPMYTYRECIILGKTSFSIFKV 92
+GLG +FHS V+V+G E ++FG E TG+F K P +T+R+ I++GKT +V
Sbjct: 36 LGLG-VFHSGVEVHGVE-YAFGAHESSSTGIFEVEPKKCPGFTFRKSILVGKTDLVAKEV 93
Query: 93 NQILRELSREWPGSSYDLLSKNCNHFCDEFCERLGVPKLPGWVNRFANAG---DTAMEVA 149
+ +L+ E+ G+ Y L+++NCNHFC+E C +L +P WVNR A G + +
Sbjct: 94 RVFMEKLAEEYQGNKYHLITRNCNHFCNEVCLKLAQKSIPRWVNRLARLGVLCNCVLPPR 153
Query: 150 GNTALRFRQAKTEIVSASKVAYR 172
N A R K E+ + K R
Sbjct: 154 LNEAKVRRVGKGELSESEKKKLR 176
>AT1G80690.1 | Symbols: | PPPDE putative thiol peptidase family
protein | chr1:30329283-30330524 REVERSE LENGTH=227
Length = 227
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 70/110 (63%), Gaps = 3/110 (2%)
Query: 34 IGLGGIFHSAVQVYGEEEWSFGYCE-QGTGVFSCPSGKNPMYTYRECIILGKTSFSIFKV 92
+GLG ++HS V+V+G E +++G E TG+F + +T+R+ I++GKT +V
Sbjct: 34 LGLG-VYHSGVEVHGIE-YAYGAHEYPSTGIFEGEPKQCEGFTFRKSILIGKTDLGPLEV 91
Query: 93 NQILRELSREWPGSSYDLLSKNCNHFCDEFCERLGVPKLPGWVNRFANAG 142
+ +L+ + GSSY+L++KNCNHFCDE C +L +P WVNR A G
Sbjct: 92 RATMEQLADNYKGSSYNLITKNCNHFCDETCIKLTGNPIPSWVNRLARIG 141
>AT5G25170.1 | Symbols: | PPPDE putative thiol peptidase family
protein | chr5:8693257-8694438 FORWARD LENGTH=218
Length = 218
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
Query: 34 IGLGGIFHSAVQVYGEEEWSFGYCEQGT-GVFSCPSGKNPMYTYRECIILGKTSFSIFKV 92
+GLG I+HS V+V+G E + FG + T G+F + P +T+R+ I++G+T V
Sbjct: 37 LGLG-IYHSGVEVHGVE-YGFGAHDHSTTGIFEVEPKQCPGFTFRKSILIGRTDLDPENV 94
Query: 93 NQILRELSREWPGSSYDLLSKNCNHFCDEFCERLGVPKLPGWVNRFANAG 142
+ +L+ E+ G+SY L++KNCNHFC++ C +L +P WVNR A G
Sbjct: 95 RVFMEKLAEEYSGNSYHLITKNCNHFCNDVCVQLTRRSIPSWVNRLARFG 144
>AT4G31980.1 | Symbols: | unknown protein; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF247, plant
(InterPro:IPR004158), Protein of unknown function
DUF862, eukaryotic (InterPro:IPR008580); BEST
Arabidopsis thaliana protein match is: Plant protein of
unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967
Blast hits to 1844 proteins in 183 species: Archae - 0;
Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477;
Viruses - 0; Other Eukaryotes - 178 (source: NCBI
BLink). | chr4:15464905-15469204 FORWARD LENGTH=680
Length = 680
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
Query: 13 NSGSEKTNSTIVQINKIFKDGIGLG-GIFHSAVQVYGEEEWSFGYCEQGTGVFSCPSGKN 71
NSG+ + + + G LG GI+HS ++V+G E + + +G+F K
Sbjct: 13 NSGTVPVYLNVYDLTPMNVYGYWLGIGIYHSGLEVHGVEYGYGAHEKSSSGIFEVEPKKC 72
Query: 72 PMYTYRECIILGKTSFSIFKVNQILRELSREWPGSSYDLLSKNCNHFCDEFCERLGVPKL 131
P +T+R+ I++G+T +V + +LS E+ G+ Y L+++NCNHFC+ +L +
Sbjct: 73 PGFTFRKSILVGETEMKAKEVRSFMEKLSEEYQGNKYHLITRNCNHFCNHVSLKLTHKSI 132
Query: 132 PGWVNRFANAG 142
P WVNR A G
Sbjct: 133 PSWVNRLARLG 143
>AT5G47310.1 | Symbols: | PPPDE putative thiol peptidase family
protein | chr5:19201325-19202674 FORWARD LENGTH=245
Length = 245
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 16/143 (11%)
Query: 1 MTDVMLHIYDVTNSGSEKTNSTIVQINKIFKDGIGLGGIFHSAVQVYGEEEWSFGYCE-Q 59
+T V L++YD+T N ++ G+G IFHS ++ +G E + +G E
Sbjct: 27 LTPVYLNVYDLTPVN-----------NYLYWFGLG---IFHSGIEAHGFE-YGYGAHEYS 71
Query: 60 GTGVFSCPSGKNPMYTYRECIILGKTSFSIFKVNQILRELSREWPGSSYDLLSKNCNHFC 119
+GVF P + +R ++LG TS S + +LSR++ G +Y L++KNCNHF
Sbjct: 72 SSGVFEVEPRSCPGFIFRRSVLLGTTSMSRSDFRSFMEKLSRKYHGDTYHLIAKNCNHFT 131
Query: 120 DEFCERLGVPKLPGWVNRFANAG 142
+E C ++ +PGW+NR A G
Sbjct: 132 EEVCLQVTGKPIPGWINRMARVG 154
>AT4G17486.1 | Symbols: | PPPDE putative thiol peptidase family
protein | chr4:9749992-9751201 REVERSE LENGTH=224
Length = 224
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 76/143 (53%), Gaps = 16/143 (11%)
Query: 1 MTDVMLHIYDVTNSGSEKTNSTIVQINKIFKDGIGLGGIFHSAVQVYGEEEWSFGYCEQG 60
+T V L++YD+T N ++ GIG IFHS ++ + E + +G E
Sbjct: 25 LTPVYLNVYDLTPVN-----------NYLYWFGIG---IFHSGIEAHNLE-YCYGAHEYP 69
Query: 61 T-GVFSCPSGKNPMYTYRECIILGKTSFSIFKVNQILRELSREWPGSSYDLLSKNCNHFC 119
T GV+ P + +R ++LG TS S + +LSR++ G +Y L++KNCNHF
Sbjct: 70 TSGVYEVEPRNCPGFIFRRSVLLGTTSMSRSDFRSYMEKLSRKYHGDTYHLIAKNCNHFT 129
Query: 120 DEFCERLGVPKLPGWVNRFANAG 142
+E C +L +PGW+NR A G
Sbjct: 130 EEVCLQLTGKPIPGWINRLARVG 152
>AT4G17486.2 | Symbols: | PPPDE putative thiol peptidase family
protein | chr4:9750063-9751201 REVERSE LENGTH=199
Length = 199
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 75/140 (53%), Gaps = 16/140 (11%)
Query: 1 MTDVMLHIYDVTNSGSEKTNSTIVQINKIFKDGIGLGGIFHSAVQVYGEEEWSFGYCEQG 60
+T V L++YD+T N ++ GIG IFHS ++ + E + +G E
Sbjct: 25 LTPVYLNVYDLTPVN-----------NYLYWFGIG---IFHSGIEAHNLE-YCYGAHEYP 69
Query: 61 T-GVFSCPSGKNPMYTYRECIILGKTSFSIFKVNQILRELSREWPGSSYDLLSKNCNHFC 119
T GV+ P + +R ++LG TS S + +LSR++ G +Y L++KNCNHF
Sbjct: 70 TSGVYEVEPRNCPGFIFRRSVLLGTTSMSRSDFRSYMEKLSRKYHGDTYHLIAKNCNHFT 129
Query: 120 DEFCERLGVPKLPGWVNRFA 139
+E C +L +PGW+NR A
Sbjct: 130 EEVCLQLTGKPIPGWINRLA 149
>AT1G47740.2 | Symbols: | PPPDE putative thiol peptidase family
protein | chr1:17567903-17569035 FORWARD LENGTH=279
Length = 279
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Query: 38 GIFHSAVQVYGEEEWSFGYCEQGT-GVFSCPSGKNPMYTYRECIILGKTSFSIFKVNQIL 96
GIFHS V+V+G E ++FG + T GVF + P + +++ I +G T+ + +V + +
Sbjct: 91 GIFHSGVEVHGVE-YAFGAHDYATSGVFEVEPRQCPGFKFKKSIFIGTTNLNPTQVREFM 149
Query: 97 RELSREWPGSSYDLLSKNCNHFCDEFCERLGVPKLPGWVNRFANAGDT 144
+++ + G+ Y L+ KNCNHFC + C +L K+P WVNR A G
Sbjct: 150 EDMACSYYGNMYHLIVKNCNHFCQDVCYKLTGKKIPKWVNRLAQIGSV 197
>AT1G47740.1 | Symbols: | PPPDE putative thiol peptidase family
protein | chr1:17567903-17569035 FORWARD LENGTH=279
Length = 279
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Query: 38 GIFHSAVQVYGEEEWSFGYCEQGT-GVFSCPSGKNPMYTYRECIILGKTSFSIFKVNQIL 96
GIFHS V+V+G E ++FG + T GVF + P + +++ I +G T+ + +V + +
Sbjct: 91 GIFHSGVEVHGVE-YAFGAHDYATSGVFEVEPRQCPGFKFKKSIFIGTTNLNPTQVREFM 149
Query: 97 RELSREWPGSSYDLLSKNCNHFCDEFCERLGVPKLPGWVNRFANAGDT 144
+++ + G+ Y L+ KNCNHFC + C +L K+P WVNR A G
Sbjct: 150 EDMACSYYGNMYHLIVKNCNHFCQDVCYKLTGKKIPKWVNRLAQIGSV 197
>AT3G07090.1 | Symbols: | PPPDE putative thiol peptidase family
protein | chr3:2243153-2244476 REVERSE LENGTH=265
Length = 265
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 14/137 (10%)
Query: 4 VMLHIYDVTNSGSEKTNSTIVQINKIFKDGIGLGGIFHSAVQVYGEEEWSFGYCEQGTGV 63
V L++YD++ + + + +++ G + G++H+ + VYG E + FG G+
Sbjct: 8 VTLNVYDLSQGLARQLSQSLL--------GKVIEGVWHTGIVVYGNE-YFFG-----GGI 53
Query: 64 FSCPSGKNPMYTYRECIILGKTSFSIFKVNQILRELSREWPGSSYDLLSKNCNHFCDEFC 123
P G+ P T I LG + L E+S + SY+LL+ NCN+F +E
Sbjct: 54 QHLPVGRTPYGTPIRTIELGLSHVPKDVFEMYLEEISPRYTAESYNLLTHNCNNFSNEVA 113
Query: 124 ERLGVPKLPGWVNRFAN 140
+ L +P ++ + N
Sbjct: 114 QFLVGKGIPDYILQLPN 130