Miyakogusa Predicted Gene
- Lj0g3v0250759.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0250759.1 Non Chatacterized Hit- tr|I1KTW4|I1KTW4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.27084
PE,96.15,0,SUBFAMILY NOT NAMED,NULL; CELL CYCLE CONTROL PROTEIN
50,Protein of unknown function DUF284,
transmem,NODE_39326_length_393_cov_169.007629.path1.1
(104 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G12740.1 | Symbols: ALIS1 | ALA-interacting subunit 1 | chr3:... 191 9e-50
AT1G54320.1 | Symbols: | LEM3 (ligand-effect modulator 3) famil... 189 3e-49
AT1G79450.1 | Symbols: ALIS5 | ALA-interacting subunit 5 | chr1:... 179 3e-46
AT1G79450.2 | Symbols: ALIS5 | ALA-interacting subunit 5 | chr1:... 179 4e-46
AT1G16360.1 | Symbols: | LEM3 (ligand-effect modulator 3) famil... 177 9e-46
AT5G46150.1 | Symbols: | LEM3 (ligand-effect modulator 3) famil... 107 1e-24
AT5G46150.2 | Symbols: | LEM3 (ligand-effect modulator 3) famil... 107 1e-24
>AT3G12740.1 | Symbols: ALIS1 | ALA-interacting subunit 1 |
chr3:4049739-4051561 FORWARD LENGTH=350
Length = 350
Score = 191 bits (485), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 90/104 (86%), Positives = 98/104 (94%)
Query: 1 MRTAALPTFRKLYGKIEVDLDEGENISVTLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFL 60
MRTAALPTFRKLYGKIE DL++GENI VTLQNNYNTYSF+GKKKLVLSTTSWLGGKNDFL
Sbjct: 247 MRTAALPTFRKLYGKIESDLEKGENIQVTLQNNYNTYSFSGKKKLVLSTTSWLGGKNDFL 306
Query: 61 GIAYLTVGGLCFFLALAFTIVYFVKPRQLGDPSYLSWNRNPGGH 104
GIAYLTVGG+CF LALAFT++Y VKPR+LGDP+YLSWNR PGG
Sbjct: 307 GIAYLTVGGICFVLALAFTVMYLVKPRRLGDPTYLSWNRIPGGR 350
>AT1G54320.1 | Symbols: | LEM3 (ligand-effect modulator 3) family
protein / CDC50 family protein | chr1:20275732-20277793
REVERSE LENGTH=349
Length = 349
Score = 189 bits (480), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 90/104 (86%), Positives = 95/104 (91%)
Query: 1 MRTAALPTFRKLYGKIEVDLDEGENISVTLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFL 60
MRTAALPTFRKLYGKIE DL+ G+ I V L NNYNTYSFNGKKKLVLSTTSWLGGKNDFL
Sbjct: 246 MRTAALPTFRKLYGKIESDLEMGDTIHVKLNNNYNTYSFNGKKKLVLSTTSWLGGKNDFL 305
Query: 61 GIAYLTVGGLCFFLALAFTIVYFVKPRQLGDPSYLSWNRNPGGH 104
GIAYLTVGG+CF LALAFTI+Y VKPR+LGDPSYLSWNRNPGG
Sbjct: 306 GIAYLTVGGICFILALAFTIMYLVKPRRLGDPSYLSWNRNPGGR 349
>AT1G79450.1 | Symbols: ALIS5 | ALA-interacting subunit 5 |
chr1:29887831-29889904 FORWARD LENGTH=350
Length = 350
Score = 179 bits (454), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 83/103 (80%), Positives = 92/103 (89%)
Query: 1 MRTAALPTFRKLYGKIEVDLDEGENISVTLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFL 60
MRTAALPTFRKLYGKIE DL G+ I+V LQNNYNTYSFNG+KKLVLSTTSWLGG+NDFL
Sbjct: 246 MRTAALPTFRKLYGKIETDLHAGDTITVLLQNNYNTYSFNGQKKLVLSTTSWLGGRNDFL 305
Query: 61 GIAYLTVGGLCFFLALAFTIVYFVKPRQLGDPSYLSWNRNPGG 103
GIAYLTVG +C FLA+ F ++Y VKPRQLGDPSYLSWNR+ GG
Sbjct: 306 GIAYLTVGSICLFLAVTFAVLYLVKPRQLGDPSYLSWNRSAGG 348
>AT1G79450.2 | Symbols: ALIS5 | ALA-interacting subunit 5 |
chr1:29888665-29889904 FORWARD LENGTH=283
Length = 283
Score = 179 bits (453), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 83/103 (80%), Positives = 92/103 (89%)
Query: 1 MRTAALPTFRKLYGKIEVDLDEGENISVTLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFL 60
MRTAALPTFRKLYGKIE DL G+ I+V LQNNYNTYSFNG+KKLVLSTTSWLGG+NDFL
Sbjct: 179 MRTAALPTFRKLYGKIETDLHAGDTITVLLQNNYNTYSFNGQKKLVLSTTSWLGGRNDFL 238
Query: 61 GIAYLTVGGLCFFLALAFTIVYFVKPRQLGDPSYLSWNRNPGG 103
GIAYLTVG +C FLA+ F ++Y VKPRQLGDPSYLSWNR+ GG
Sbjct: 239 GIAYLTVGSICLFLAVTFAVLYLVKPRQLGDPSYLSWNRSAGG 281
>AT1G16360.1 | Symbols: | LEM3 (ligand-effect modulator 3) family
protein / CDC50 family protein | chr1:5593493-5595179
REVERSE LENGTH=336
Length = 336
Score = 177 bits (450), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 82/103 (79%), Positives = 92/103 (89%)
Query: 1 MRTAALPTFRKLYGKIEVDLDEGENISVTLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFL 60
MRTAALPTFRKLYGKI+ DL G+ I V LQNNYNTYSFNGKKKLVLSTTSWLGG+NDFL
Sbjct: 232 MRTAALPTFRKLYGKIDTDLQAGDTIKVLLQNNYNTYSFNGKKKLVLSTTSWLGGRNDFL 291
Query: 61 GIAYLTVGGLCFFLALAFTIVYFVKPRQLGDPSYLSWNRNPGG 103
GIAYLTVG +C FLA++F+++Y KPRQLGDPSYLSWNR+ GG
Sbjct: 292 GIAYLTVGSICLFLAVSFSVLYLAKPRQLGDPSYLSWNRSAGG 334
>AT5G46150.1 | Symbols: | LEM3 (ligand-effect modulator 3) family
protein / CDC50 family protein | chr5:18708735-18710424
REVERSE LENGTH=343
Length = 343
Score = 107 bits (268), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 73/99 (73%), Gaps = 3/99 (3%)
Query: 1 MRTAALPTFRKLYGKIEVDLDEGENISVTLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFL 60
MR AAL +FRKLYG+IE DL+ G+ + V L NNYNTYSF+G+KKL+LST++WLGG+NDFL
Sbjct: 243 MRAAALLSFRKLYGRIEEDLEPGKVVEVNLMNNYNTYSFSGQKKLILSTSNWLGGRNDFL 302
Query: 61 GIAYLTVGGLCFFLALAFTIVYFVKPRQLGDPSYLSWNR 99
GI YL VG +++ F +++ PR GD SWN+
Sbjct: 303 GITYLVVGSSSIVISIIFMLLHLKNPRPYGDN---SWNK 338
>AT5G46150.2 | Symbols: | LEM3 (ligand-effect modulator 3) family
protein / CDC50 family protein | chr5:18708735-18710424
REVERSE LENGTH=343
Length = 343
Score = 107 bits (268), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 73/99 (73%), Gaps = 3/99 (3%)
Query: 1 MRTAALPTFRKLYGKIEVDLDEGENISVTLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFL 60
MR AAL +FRKLYG+IE DL+ G+ + V L NNYNTYSF+G+KKL+LST++WLGG+NDFL
Sbjct: 243 MRAAALLSFRKLYGRIEEDLEPGKVVEVNLMNNYNTYSFSGQKKLILSTSNWLGGRNDFL 302
Query: 61 GIAYLTVGGLCFFLALAFTIVYFVKPRQLGDPSYLSWNR 99
GI YL VG +++ F +++ PR GD SWN+
Sbjct: 303 GITYLVVGSSSIVISIIFMLLHLKNPRPYGDN---SWNK 338