Miyakogusa Predicted Gene
- Lj0g3v0250639.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0250639.1 CUFF.16412.1
(185 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G58610.1 | Symbols: | PHD finger transcription factor, putat... 131 3e-31
AT3G14980.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/F... 106 7e-24
AT5G63900.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/F... 96 1e-20
AT4G14920.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/F... 89 1e-18
AT1G05380.2 | Symbols: | Acyl-CoA N-acyltransferase with RING/F... 89 2e-18
AT1G05380.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/F... 89 2e-18
AT5G36670.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 77 9e-15
AT5G36740.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/F... 76 1e-14
AT2G37520.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/F... 75 2e-14
AT3G53680.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/F... 75 3e-14
AT2G36720.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/F... 67 9e-12
AT2G27980.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/F... 60 8e-10
AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 | chr... 57 1e-08
AT5G12400.1 | Symbols: | DNA binding;zinc ion binding;DNA bindi... 52 2e-07
AT5G22760.1 | Symbols: | PHD finger family protein | chr5:75716... 51 5e-07
AT5G35210.1 | Symbols: | metalloendopeptidases;zinc ion binding... 49 2e-06
AT5G35210.2 | Symbols: | metalloendopeptidases;zinc ion binding... 49 2e-06
AT3G01460.1 | Symbols: MBD9, ATMBD9 | methyl-CPG-binding domain ... 48 5e-06
AT5G24330.1 | Symbols: ATXR6, SDG34 | ARABIDOPSIS TRITHORAX-RELA... 47 8e-06
>AT5G58610.1 | Symbols: | PHD finger transcription factor, putative
| chr5:23686771-23691053 REVERSE LENGTH=1065
Length = 1065
Score = 131 bits (330), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 107/185 (57%), Gaps = 24/185 (12%)
Query: 2 IDVMHEHRVGETMEQPSIDLFQGENDNICTVCNYGGELILCDRCPSSFHMSCLNLEDIPD 61
++ + + + + + L QGEND C+VC+YGG+LILCD CPS+FH +CL LED+PD
Sbjct: 669 VEAYKKRKKAQPPDMLKMKLRQGENDVFCSVCHYGGKLILCDGCPSAFHANCLGLEDVPD 728
Query: 62 GDWFCPSCRCRSCGQVKIEET----KDEELLTCAQCEHKYHDECLR-NKAGDDLGSC-QE 115
GDWFC SC C +CGQ ++ T K+E+ ++C QCE KYH CLR + A D L E
Sbjct: 729 GDWFCQSCCCGACGQFFLKTTSTNAKEEKFISCKQCELKYHPSCLRYDGACDSLDKILGE 788
Query: 116 TFLCSQECQKIHSGLRNLLGKPISVGENGXXXXXXXXXXXXXXXXAEYYSKLSVALSVMH 175
+ CS++C++ S N+ G S E AE + LSVAL VMH
Sbjct: 789 KWFCSKDCEE--SLEPNMYGDDASKIEAA----------------AENHCILSVALDVMH 830
Query: 176 ESFEP 180
E FEP
Sbjct: 831 ELFEP 835
>AT3G14980.1 | Symbols: | Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger protein |
chr3:5039931-5044811 REVERSE LENGTH=1189
Length = 1189
Score = 106 bits (265), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 94/179 (52%), Gaps = 13/179 (7%)
Query: 8 HRVGETMEQPSIDLFQGENDNICTVCNYGGELILCDRCPSSFHMSCLNLEDIPDGDWFCP 67
R G +E+ S D ND+ C VC GGELI CD CPS+FH +CL+++ +P+G W+C
Sbjct: 710 RRNGWRLEKASDD---DPNDDSCGVCGDGGELICCDNCPSTFHQACLSMQVLPEGSWYCS 766
Query: 68 SCRCRSCGQVKIEETKDEELLTCAQCEHKYHDECLRNKAGDDLGSCQETFLCSQECQKIH 127
SC C C ++ + + + C+QC HKYH CL+ ET+ C + C+K++
Sbjct: 767 SCTCWICSELVSDNAERSQDFKCSQCAHKYHGTCLQG-ISKRRKLFPETYFCGKNCEKVY 825
Query: 128 SGLRNLLGKPISVGENGXX--------XXXXXXXXXXXXXXAEYYSKLSVALSVMHESF 178
+GL + +G I+ +G AE SKL+VALS+M ESF
Sbjct: 826 NGLSSRVG-IINPNADGLSWSILKCFQEDGMVHSARRLALKAECNSKLAVALSIMEESF 883
>AT5G63900.1 | Symbols: | Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger domain |
chr5:25568698-25570371 FORWARD LENGTH=557
Length = 557
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 28 NICTVCNYGGELILCDRCPSSFHMSCLNLEDIPDGD-WFCPSCRCRSCGQVKIEETKDEE 86
++C VC++GG+L+LCD CPS+FH +CL L +P+ D WFCP C C CG +E + +
Sbjct: 257 DVCCVCHWGGDLLLCDGCPSAFHHACLGLSSLPEEDLWFCPCCCCDICGS--MESPANSK 314
Query: 87 LLTCAQCEHKYHDECLRNKAGDDLGSCQETFLCSQECQKIHSGLRNLLGKPISVGENGXX 146
L+ C QC+ ++H CL+ D + CS +C ++ S L NLLG I+VG +G
Sbjct: 315 LMACEQCQRRFHLTCLKE---DSCIVSSRGWFCSSQCNRVFSALENLLGSKIAVGNDGDL 371
Query: 147 X-XXXXXXXXXXXXXAEYYSKLSVALSVMHESFEP 180
E SKL A+ ++H+ FEP
Sbjct: 372 VWTLMRAPNEGEHYDDEQISKLESAVEILHQGFEP 406
>AT4G14920.1 | Symbols: | Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger protein |
chr4:8531157-8535842 REVERSE LENGTH=1138
Length = 1138
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 86/178 (48%), Gaps = 12/178 (6%)
Query: 18 SIDLFQGE-NDNICTVCNYGGELILCDRCPSSFHMSCLNLEDIPDGDWFCPSCRCRSCGQ 76
S+D+ + ND+ C +C GG+L+ CD CPS+FH CL++ P GDW CP+C C+ C
Sbjct: 675 SVDVIADDPNDDACGICGDGGDLVCCDGCPSTFHQRCLDIRMFPLGDWHCPNCTCKFCKA 734
Query: 77 VKIEETKDEELLTCAQCEHKYHDECLRNKAGDDLGSCQE--TFLCSQECQKIHSGLRNLL 134
V + T+ TC CE KYH C+ KA E T C ++C+ + G++ +
Sbjct: 735 VIEDVTQTVGANTCKMCEKKYHKSCM-PKANVTPADTTEPITSFCGKKCKALSEGVKKYV 793
Query: 135 GKPISVGENGXXX-------XXXXXXXXXXXXXAEYYSKLSVALSVMHESFEPFWWRK 185
G + E G E SKL++AL+VM E F P R+
Sbjct: 794 GVKHEL-EAGFSWSLVHRECTNSDLSLSGHPHIVENNSKLALALTVMDECFLPIIDRR 850
>AT1G05380.2 | Symbols: | Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger protein |
chr1:1577231-1582190 FORWARD LENGTH=1138
Length = 1138
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 30 CTVCNYGGELILCDRCPSSFHMSCLNLEDIPDGDWFCPSCRCRSCGQVKIEETKDE---E 86
C +C GG+LI CD CPS++H +CL ++ +P GDW CP+C C+ C KD
Sbjct: 628 CGICGDGGDLICCDGCPSTYHQNCLGMQVLPSGDWHCPNCTCKFCDAAVASGGKDGNFIS 687
Query: 87 LLTCAQCEHKYHDECLRNKAGDDLGSCQETFLCSQECQKIHSGLRNLLGKPISVGENG-- 144
LL+C CE +YH CL ++A + C +C ++ L+ LG + E G
Sbjct: 688 LLSCGMCERRYHQLCLNDEAHKVQSFGSASSFCGPKCLELFEKLQKYLGVKTEI-EGGYS 746
Query: 145 -----XXXXXXXXXXXXXXXXAEYYSKLSVALSVMHESFEPFWWRK 185
E SKL+V L++M E F P R+
Sbjct: 747 WSLIHRVDTDSDTNSQMSAQRIENNSKLAVGLAIMDECFLPIVDRR 792
>AT1G05380.1 | Symbols: | Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger protein |
chr1:1577231-1582190 FORWARD LENGTH=1138
Length = 1138
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 30 CTVCNYGGELILCDRCPSSFHMSCLNLEDIPDGDWFCPSCRCRSCGQVKIEETKDE---E 86
C +C GG+LI CD CPS++H +CL ++ +P GDW CP+C C+ C KD
Sbjct: 628 CGICGDGGDLICCDGCPSTYHQNCLGMQVLPSGDWHCPNCTCKFCDAAVASGGKDGNFIS 687
Query: 87 LLTCAQCEHKYHDECLRNKAGDDLGSCQETFLCSQECQKIHSGLRNLLGKPISVGENG-- 144
LL+C CE +YH CL ++A + C +C ++ L+ LG + E G
Sbjct: 688 LLSCGMCERRYHQLCLNDEAHKVQSFGSASSFCGPKCLELFEKLQKYLGVKTEI-EGGYS 746
Query: 145 -----XXXXXXXXXXXXXXXXAEYYSKLSVALSVMHESFEPFWWRK 185
E SKL+V L++M E F P R+
Sbjct: 747 WSLIHRVDTDSDTNSQMSAQRIENNSKLAVGLAIMDECFLPIVDRR 792
>AT5G36670.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr5:14401491-14406427 FORWARD LENGTH=1193
Length = 1193
Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 83/183 (45%), Gaps = 21/183 (11%)
Query: 19 IDLFQGE-NDNICTVCNYGGELILCDRCPSSFHMSCLNLEDIPDGDWFCPSCRCRSCGQ- 76
+D G+ ND+ C +C GG+LI CD CPS+FH SCL+++ P G W+C +C C+ C +
Sbjct: 641 VDFGSGDPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIKKFPSGAWYCYNCSCKFCEKD 700
Query: 77 --VKIEETKDEELLTCAQCEHK----------YHDECLRNKAGDDLGSCQETFLCSQECQ 124
K E + L +C CE K H C+ N+ G G C + CQ
Sbjct: 701 EAAKHETSTLPSLSSCRLCEEKCSKHYPHTLADHQACI-NQDGTVPGERSTDSFCGKYCQ 759
Query: 125 KIHSGLRNLLG--KPISVGENGXXXXXXXXXXXXX----XXXAEYYSKLSVALSVMHESF 178
++ L+ +G P+ G + Y +K++VA SVM E F
Sbjct: 760 ELFEELQLFIGVKHPLPEGFSWSFLRRFELPSEVADCDISEKIAYNAKMAVAFSVMDECF 819
Query: 179 EPF 181
P
Sbjct: 820 SPL 822
>AT5G36740.1 | Symbols: | Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger protein |
chr5:14460790-14465727 FORWARD LENGTH=1179
Length = 1179
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 83/183 (45%), Gaps = 21/183 (11%)
Query: 19 IDLFQGE-NDNICTVCNYGGELILCDRCPSSFHMSCLNLEDIPDGDWFCPSCRCRSCGQ- 76
+D G+ ND+ C +C GG+LI CD CPS+FH SCL+++ P G W+C +C C+ C +
Sbjct: 641 VDFGSGDPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIKKFPSGAWYCYNCSCKFCEKD 700
Query: 77 --VKIEETKDEELLTCAQCEHK----------YHDECLRNKAGDDLGSCQETFLCSQECQ 124
K E + L +C CE K H C+ N+ G G C + CQ
Sbjct: 701 EAAKHETSTLPSLSSCRLCEEKCSKHYPHTLADHQACI-NQDGTVPGERSTDSFCGKYCQ 759
Query: 125 KIHSGLRNLLG--KPISVGENGXXXXXXXXXXXXX----XXXAEYYSKLSVALSVMHESF 178
++ L+ +G P+ G + Y +K++VA SVM E F
Sbjct: 760 ELFEELQLFIGVKHPLPEGFSWSFLRRFELPSEVADCDISEKIAYNAKMAVAFSVMDECF 819
Query: 179 EPF 181
P
Sbjct: 820 SPL 822
>AT2G37520.1 | Symbols: | Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger domain |
chr2:15745033-15749615 REVERSE LENGTH=829
Length = 829
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 43/154 (27%)
Query: 21 LFQGENDNICTVCNYGGELILCDRCPSSFHMSCLNLEDIPDGDWFCPSCR---------- 70
+ G++D++C++C GG+L+LC CP +FH +CL + +P+G W+C SC
Sbjct: 462 ITTGDSDDMCSICGDGGDLLLCAGCPQAFHTACLKFQSMPEGTWYCSSCNDGPISSKKAT 521
Query: 71 -------------------------------CRSCGQVKIEETKDEELLTCAQCEHKYHD 99
CRS I + D ++ C QCE +YH
Sbjct: 522 TTDPSGNARPIVIRLSRVVKAPESDIGGCVFCRS-HDFSIGKFDDRTVILCDQCEKEYHV 580
Query: 100 ECLRNKAGDDLGSC-QETFLCSQECQKIHSGLRN 132
CLR DL QE + C C +IH+ ++N
Sbjct: 581 GCLRENGFCDLKEIPQEKWFCCSNCSRIHTAVQN 614
>AT3G53680.1 | Symbols: | Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger domain |
chr3:19892863-19897412 REVERSE LENGTH=841
Length = 841
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 39/164 (23%)
Query: 8 HRVGETMEQPSIDLFQGENDNICTVCNYGGELILCDRCPSSFHMSCLNLEDIPDGDWFCP 67
H + ++ + G++D++C++C GG+L+LC CP +FH +CL + +P+G W+C
Sbjct: 467 HDIAVSLADGGHVITTGDSDDMCSICGNGGDLLLCAGCPQAFHTACLKFQSMPEGTWYCS 526
Query: 68 SCR--------------------CRSCGQVKIEETK------------------DEELLT 89
SC R VK E++ D ++
Sbjct: 527 SCNDGPTSCKIATASDPNLKPIVIRLTRVVKAPESEIGGCVFCRSHDFSIGKFDDRTVIL 586
Query: 90 CAQCEHKYHDECLR-NKAGDDLGSCQETFLCSQECQKIHSGLRN 132
C QCE +YH CLR N+ D G Q+ + C +C +IH L++
Sbjct: 587 CDQCEKEYHVGCLRENELCDLKGIPQDKWFCCSDCSRIHRVLQS 630
>AT2G36720.1 | Symbols: | Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger domain |
chr2:15393447-15399189 FORWARD LENGTH=1007
Length = 1007
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 50/160 (31%)
Query: 25 ENDNICTVCNYGGELILCDRCPSSFHMSCLNLEDIPDGDWFCPSCRCR------------ 72
+N+++C +C GG L+LCD CP +FH+ C++L IP G+W C C +
Sbjct: 613 DNNDLCVICADGGNLLLCDSCPRAFHIECVSLPSIPRGNWHCKYCENKFTSEIAGEYNVN 672
Query: 73 --SCGQVK------------IEETKDEE-----------------------LLTCAQCEH 95
+ GQ++ I K+ E ++ C QCE
Sbjct: 673 SSAVGQLEGVDPVDQLAGRCIRVVKNMEAETNGCVLCSGSDFCRSGFGPRTIIICDQCEK 732
Query: 96 KYHDECLRNKAGDDLGSCQE-TFLCSQECQKIHSGLRNLL 134
+YH CL ++ DL + + CS +C +I+S L+ LL
Sbjct: 733 EYHIGCLSSQNIVDLKELPKGNWFCSMDCTRINSTLQKLL 772
>AT2G27980.1 | Symbols: | Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger domain |
chr2:11913950-11919741 REVERSE LENGTH=1072
Length = 1072
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 75/181 (41%), Gaps = 54/181 (29%)
Query: 5 MHEHRVGETMEQPSIDLFQGENDNICTVCNYGGELILCDRCPSSFHMSCLNLEDIPDGDW 64
+HE V +M+Q END++C++C GGEL+ CD CP S+H C +L +P W
Sbjct: 676 LHELSVALSMDQ---RFSIHENDDLCSICRDGGELVCCDTCPRSYHKVCASLPSLPSERW 732
Query: 65 FCPSC--------------RCRSCGQVK----IEETKD---------------------- 84
C C + G+V+ I E +
Sbjct: 733 SCKYCVNMVEREKFVDSNLNAIAAGRVQGVDAIAEITNRCIRIVSSFVTELPSVCVLCRG 792
Query: 85 ----------EELLTCAQCEHKYHDECLRNKAGDDLGSC-QETFLCSQECQKIHSGLRNL 133
++ C QCE ++H CL+ + DL +E + CS C++I++ L NL
Sbjct: 793 HSFCRLGFNARTVIICDQCEKEFHVGCLKERDIADLKELPEEKWFCSLGCEEINTTLGNL 852
Query: 134 L 134
+
Sbjct: 853 I 853
>AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 |
chr5:18083659-18092162 REVERSE LENGTH=2223
Length = 2223
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 30 CTVCNYGGELILCDRCPSSFHMSCLN--LEDIPDGDWFCPSCRCRS 73
C +C+ GG+L+ CD CP ++H +CLN L+ IP+G W CP C S
Sbjct: 78 CVICDLGGDLLCCDSCPRTYHTACLNPPLKRIPNGKWICPKCSPNS 123
>AT5G12400.1 | Symbols: | DNA binding;zinc ion binding;DNA binding
| chr5:4013813-4021018 FORWARD LENGTH=1602
Length = 1602
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 19 IDLFQGENDNICTVCNYGGELILCDRCPSSFHMSCLNLED--IPDGDWFCPSCRC--RSC 74
ID N + C C G L+ CD CP+++H C+ L +P+GDW+CP C R+
Sbjct: 600 IDTSFDRNSDDCCFCKMDGSLLCCDGCPAAYHSKCVGLASHLLPEGDWYCPECAFDRRAP 659
Query: 75 GQVKIEETKDEELLTCAQCEHKYHDEC 101
G ++ + E + KY+ C
Sbjct: 660 GLKPDKQIRGAEFIEIDPHGRKYYSSC 686
>AT5G22760.1 | Symbols: | PHD finger family protein |
chr5:7571635-7577662 FORWARD LENGTH=1566
Length = 1566
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 11 GETMEQPSIDLFQGENDNICTVCNYGGELILCDRCPSSFHMSCLNLED--IPDGDWFCPS 68
G + P +D N + C +C G L+ CD CP ++H C+ + IPDG W+CP
Sbjct: 401 GPNGDSPDLD----ANSDECRLCGMDGTLLCCDGCPLAYHSRCIGVVKMYIPDGPWYCPE 456
Query: 69 CRCRSCGQVKIEET 82
C + G + +T
Sbjct: 457 CTIKKMGPTVVYKT 470
>AT5G35210.1 | Symbols: | metalloendopeptidases;zinc ion
binding;DNA binding | chr5:13474499-13482238 REVERSE
LENGTH=1706
Length = 1706
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 26 NDNICTVCNYGGELILCDRCPSSFHMSCLNLED--IPDGDWFCPSCRCRSCG 75
N + C +C G L+ CD CP ++H C+ + IPDG WFCP C G
Sbjct: 410 NSDECRICGMDGTLLCCDGCPLAYHSRCIGVVKMYIPDGPWFCPECTINKKG 461
>AT5G35210.2 | Symbols: | metalloendopeptidases;zinc ion
binding;DNA binding | chr5:13476213-13482238 REVERSE
LENGTH=1539
Length = 1539
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 26 NDNICTVCNYGGELILCDRCPSSFHMSCLNLED--IPDGDWFCPSCRCRSCG 75
N + C +C G L+ CD CP ++H C+ + IPDG WFCP C G
Sbjct: 410 NSDECRICGMDGTLLCCDGCPLAYHSRCIGVVKMYIPDGPWFCPECTINKKG 461
>AT3G01460.1 | Symbols: MBD9, ATMBD9 | methyl-CPG-binding domain 9 |
chr3:173316-182038 FORWARD LENGTH=2176
Length = 2176
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 10/84 (11%)
Query: 26 NDNICTVCNYGGE---LILCDRCPSSFHMSCLN--LEDIPDGDWFCPSCR-CRSCGQVKI 79
++ +C VC + ++LCD C + +H CLN L IPDG+W+CPSC + Q +
Sbjct: 1286 DEGVCKVCGVDKDDDSVLLCDTCDAEYHTYCLNPPLIRIPDGNWYCPSCVIAKRMAQEAL 1345
Query: 80 EETKDEELLTCAQCEHKYHDECLR 103
E K L + KY E R
Sbjct: 1346 ESYK----LVRRRKGRKYQGELTR 1365
>AT5G24330.1 | Symbols: ATXR6, SDG34 | ARABIDOPSIS
TRITHORAX-RELATED PROTEIN 6 | chr5:8295245-8296997
REVERSE LENGTH=349
Length = 349
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 28 NICTVCNYG---GELILCDRCPSSFHMSCLN--LEDIPDGDWFCPSC 69
+C C+ G +L+LCD+C FH+ CL L +P G WFCPSC
Sbjct: 33 TVCEECSSGKQPAKLLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSC 79