Miyakogusa Predicted Gene
- Lj0g3v0250259.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0250259.2 Non Chatacterized Hit- tr|I1JM14|I1JM14_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,83.45,0,AUX_IAA,AUX/IAA protein; Auxin_resp,Auxin response
factor; B3,B3 DNA binding domain; no description,,CUFF.16426.2
(683 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 702 0.0
AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 699 0.0
AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 581 e-166
AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 581 e-166
AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 579 e-165
AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 578 e-165
AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 | chr1:1... 529 e-150
AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 | chr1:1... 525 e-149
AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 524 e-149
AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 523 e-148
AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 | chr1:1... 516 e-146
AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 | chr1:1... 513 e-145
AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 | chr1:1... 513 e-145
AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 | chr3:2... 511 e-145
AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 471 e-132
AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 471 e-132
AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 471 e-132
AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 | chr5:249... 470 e-132
AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 397 e-110
AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 | chr1:1... 391 e-109
AT1G34170.1 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 360 2e-99
AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 335 7e-92
AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 335 8e-92
AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 | chr5:146... 325 8e-89
AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 | ... 325 9e-89
AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 | chr5:243... 320 2e-87
AT1G34170.2 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 318 8e-87
AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 318 1e-86
AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 fam... 315 7e-86
AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor ... 313 4e-85
AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response fact... 311 1e-84
AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 302 6e-82
AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 301 1e-81
AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23... 301 1e-81
AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 | chr2:1... 239 5e-63
AT1G43950.1 | Symbols: ARF23 | auxin response factor 23 | chr1:1... 234 1e-61
AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 | chr4:1... 226 4e-59
AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 | chr1:2... 179 4e-45
AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid induci... 69 1e-11
AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 65 2e-10
AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 65 2e-10
AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 65 2e-10
AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated prot... 63 6e-10
AT4G01500.1 | Symbols: NGA4 | AP2/B3-like transcriptional factor... 62 1e-09
AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31... 62 1e-09
AT1G01030.1 | Symbols: NGA3 | AP2/B3-like transcriptional factor... 62 1e-09
AT1G51950.1 | Symbols: IAA18 | indole-3-acetic acid inducible 18... 61 2e-09
AT2G46990.1 | Symbols: IAA20 | indole-3-acetic acid inducible 20... 60 4e-09
AT3G62100.1 | Symbols: IAA30 | indole-3-acetic acid inducible 30... 60 4e-09
AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional regu... 60 6e-09
AT2G46870.1 | Symbols: NGA1 | AP2/B3-like transcriptional factor... 59 1e-08
AT1G80390.1 | Symbols: IAA15 | indole-3-acetic acid inducible 15... 57 6e-08
AT4G28640.3 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 55 1e-07
AT4G28640.1 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 55 1e-07
AT1G04100.1 | Symbols: IAA10 | indoleacetic acid-induced protein... 55 2e-07
AT4G28640.2 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 54 2e-07
AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional... 54 3e-07
AT3G23030.1 | Symbols: IAA2 | indole-3-acetic acid inducible 2 |... 54 3e-07
AT3G15540.1 | Symbols: IAA19, MSG2 | indole-3-acetic acid induci... 54 4e-07
AT3G61970.1 | Symbols: NGA2 | AP2/B3-like transcriptional factor... 54 5e-07
AT1G04240.1 | Symbols: SHY2, IAA3 | AUX/IAA transcriptional regu... 52 1e-06
AT1G13260.1 | Symbols: RAV1, EDF4 | related to ABI3/VP1 1 | chr1... 52 1e-06
AT1G04250.1 | Symbols: AXR3, IAA17 | AUX/IAA transcriptional reg... 52 2e-06
AT2G36080.1 | Symbols: | AP2/B3-like transcriptional factor fam... 51 2e-06
AT2G36080.2 | Symbols: | AP2/B3-like transcriptional factor fam... 50 4e-06
AT1G52830.1 | Symbols: IAA6, SHY1 | indole-3-acetic acid 6 | chr... 50 6e-06
>AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=638
Length = 638
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/659 (55%), Positives = 441/659 (66%), Gaps = 68/659 (10%)
Query: 24 LYEPLWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQ-ELNQRIPLLKLPTKILCRV 82
LY+ LWKL AGPLVDVP+ +RV+YFPQGHMEQLEAST Q +LN PL LP KILC V
Sbjct: 9 LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNV 68
Query: 83 VNVHLMAEQETDEVYAQITLVPESNQ-DEPTSPDPCPAEPPKPTVHSFCKVLTASDTSTH 141
+NV L AE++TDEVYAQITL+P + DEP SPDP P E +P VHSF KVLTASDTSTH
Sbjct: 69 MNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLTASDTSTH 128
Query: 142 GGFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWSTF 201
GGFSVLRKHATECLP LDM+QQTPTQELVA+D+ GY+W+FKHIFRGQPRRHLLTTGWSTF
Sbjct: 129 GGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWSTF 188
Query: 202 VTSKRLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVAT 261
VTSKRLVAGDTFVFLRGENGELRVGVRR HLGVLATA HA T
Sbjct: 189 VTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHATQT 248
Query: 262 QTLFVVYYKPRTSQFIISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTIVGVE 321
+T+F+VYYKPRTSQFIIS+NKYLEAM+NKFS+GMR KMRFE +D+ E +R+SGT++GV+
Sbjct: 249 KTMFIVYYKPRTSQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPE--RRYSGTVIGVK 306
Query: 322 DISPHWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPTVVKTKRPRQP 381
D SPHW +SKWR L+V WDEPA+++RP++VSPWEIEPFV S + P + ++K KRPRQ
Sbjct: 307 DCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVP--KSVMLKNKRPRQV 364
Query: 382 SEIPDVDTTSAASAFWDAGMKHADMTQLGVLSESKRSDVSGMWHHKQTDMNSKTNSNTMS 441
SE+ +D AS W + + E +S ++ W Q
Sbjct: 365 SEVSALDVGITASNLWSSVLTQP--------HEFAQSCITSQWSSPQ------------- 403
Query: 442 RNQTEAXXXXXXXXXXXXXXVQDTTDDSKSVCRMNIDYVLDQVDKES------------- 488
+D +D+K +N Y + V K+S
Sbjct: 404 ------------------QCHRDANEDAKKSDWLNNSYSVSNVAKDSTLNDQMVSPVEQK 445
Query: 489 KVETATSYRLFGIDLIDHSRNSAAAENASPHVVNVPRAEVCATASTLSKTDSGSKSDISK 548
K ET +YRLFGIDL+ S A P P + + T+ + S KS+ISK
Sbjct: 446 KPETTANYRLFGIDLMSSSL-------AVPEEKTAPMRPINISKPTMD-SHSDPKSEISK 497
Query: 549 ASXXXXXXXXXXXXXXXXXXICG--RSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQL 606
S RSRTKVQMQGV VGRAVDLN L GY++LID++E+L
Sbjct: 498 VSEEKKQEPAEGSPKEVQSKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKL 557
Query: 607 FDLKGQLQHRNKWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFICSSQDVKKMSSGSKL 665
FD+KG+L+ RN+WEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFI S ++VKKM+ G++L
Sbjct: 558 FDIKGELRSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQL 616
>AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=636
Length = 636
Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/659 (55%), Positives = 441/659 (66%), Gaps = 70/659 (10%)
Query: 24 LYEPLWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQ-ELNQRIPLLKLPTKILCRV 82
LY+ LWKL AGPLVDVP+ +RV+YFPQGHMEQLEAST Q +LN PL LP KILC V
Sbjct: 9 LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNV 68
Query: 83 VNVHLMAEQETDEVYAQITLVPESNQ-DEPTSPDPCPAEPPKPTVHSFCKVLTASDTSTH 141
+NV L AE++TDEVYAQITL+P + DEP SPDP P E +P VHSF KVLTASDTSTH
Sbjct: 69 MNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLTASDTSTH 128
Query: 142 GGFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWSTF 201
GGFSVLRKHATECLP LDM+QQTPTQELVA+D+ GY+W+FKHIFRGQPRRHLLTTGWSTF
Sbjct: 129 GGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWSTF 188
Query: 202 VTSKRLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVAT 261
VTSKRLVAGDTFVFLRGENGELRVGVRR HLGVLATA HA T
Sbjct: 189 VTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHATQT 248
Query: 262 QTLFVVYYKPRTSQFIISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTIVGVE 321
+T+F+VYYKPRTSQFIIS+NKYLEAM+NKFS+GMR KMRFE +D+ E +R+SGT++GV+
Sbjct: 249 KTMFIVYYKPRTSQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPE--RRYSGTVIGVK 306
Query: 322 DISPHWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPTVVKTKRPRQP 381
D SPHW +SKWR L+V WDEPA+++RP++VSPWEIEPFV S + P + ++K KRPRQ
Sbjct: 307 DCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVP--KSVMLKNKRPRQV 364
Query: 382 SEIPDVDTTSAASAFWDAGMKHADMTQLGVLSESKRSDVSGMWHHKQTDMNSKTNSNTMS 441
SE+ + T AS W + + E +S ++ W Q
Sbjct: 365 SEVSALGIT--ASNLWSSVLTQP--------HEFAQSCITSQWSSPQ------------- 401
Query: 442 RNQTEAXXXXXXXXXXXXXXVQDTTDDSKSVCRMNIDYVLDQVDKES------------- 488
+D +D+K +N Y + V K+S
Sbjct: 402 ------------------QCHRDANEDAKKSDWLNNSYSVSNVAKDSTLNDQMVSPVEQK 443
Query: 489 KVETATSYRLFGIDLIDHSRNSAAAENASPHVVNVPRAEVCATASTLSKTDSGSKSDISK 548
K ET +YRLFGIDL+ S A P P + + T+ + S KS+ISK
Sbjct: 444 KPETTANYRLFGIDLMSSSL-------AVPEEKTAPMRPINISKPTMD-SHSDPKSEISK 495
Query: 549 ASXXXXXXXXXXXXXXXXXXICG--RSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQL 606
S RSRTKVQMQGV VGRAVDLN L GY++LID++E+L
Sbjct: 496 VSEEKKQEPAEGSPKEVQSKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKL 555
Query: 607 FDLKGQLQHRNKWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFICSSQDVKKMSSGSKL 665
FD+KG+L+ RN+WEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFI S ++VKKM+ G++L
Sbjct: 556 FDIKGELRSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQL 614
>AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 581 bits (1497), Expect = e-166, Method: Compositional matrix adjust.
Identities = 319/653 (48%), Positives = 400/653 (61%), Gaps = 34/653 (5%)
Query: 22 DELYEPLWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCR 81
D L LW AGPLV +PR G+RV+YFP+GHMEQLEAS +Q L Q++P LP+KILC+
Sbjct: 17 DALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCK 76
Query: 82 VVNVHLMAEQETDEVYAQITLVPESNQDEPTSPDPCPAEPPKPTVHSFCKVLTASDTSTH 141
V+N+ AE ETDEVYAQITL+PE +Q EPTSPD EP K TVHSFCK LTASDTSTH
Sbjct: 77 VINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTSTH 136
Query: 142 GGFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWSTF 201
GGFSVLR+HA +CLP LDMSQQ P QELVA DL EW F+HIFRGQPRRHLLTTGWS F
Sbjct: 137 GGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVF 196
Query: 202 VTSKRLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVAT 261
V+SK+LVAGD F+FLRGEN ELRVGVRR R H+GVLATA+HA+ T
Sbjct: 197 VSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITT 256
Query: 262 QTLFVVYYKPRT--SQFIISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTIVG 319
T+F V+YKPRT S+FI+SVN+YLEA K S+GMR KMRFE ++A E KRFSGTIVG
Sbjct: 257 GTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPE--KRFSGTIVG 314
Query: 320 V-EDISPHWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPTVV-KTKR 377
V E+ S W +S+WRSLKVQWDEP++V RP+RVSPWE+EP VA+ STPS QP + KR
Sbjct: 315 VQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVAN-STPSSQPQPPQRNKR 373
Query: 378 PRQPSEIPDVDTTSAASAFWDAGMKHADMTQLGVLSESKRSDVSGMWHHKQTDMNSKTNS 437
PR P +P T + D K T V S + + H S
Sbjct: 374 PRPPG-LPSPATGPSGPVTPDGVWKSPADTPSSVPLFSPPAKAATFGHGGNKSFGVSIGS 432
Query: 438 NTMSRNQTEAXXXXXXXXXXXXXXVQDTTDDSKSVCRMNIDYVLDQVDKESKVETATSYR 497
N A + T + VCR+ +++ V+ + A+
Sbjct: 433 AFWPTNADSAAESFASAFNNESTEKKQTNGN---VCRLFGFELVENVNVDECFSAASVSG 489
Query: 498 LFGIDLIDHSRNSAAAENASPHVVNVPRAEVCATASTLSKTDSGSKSDISKASXXXXXXX 557
+D S + + + P +N +SDI S
Sbjct: 490 AVAVDQPVPSNEFDSGQQSEPLNIN--------------------QSDIPSGSGDPEKSS 529
Query: 558 XXXXXXXXXXXICGRSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQ-LQHR 616
I RS TKV MQG AVGRA+DL + Y+ L +LE++FD+KG+ L+
Sbjct: 530 LRSPQESQSRQI--RSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLEST 587
Query: 617 NKWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFICSSQDVKKMSSGSKLPISS 669
KW++V+TDDE DMM+VGDDPW EFC MV++IFI + ++VKK+S +KL +++
Sbjct: 588 KKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNA 640
>AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 581 bits (1497), Expect = e-166, Method: Compositional matrix adjust.
Identities = 319/653 (48%), Positives = 400/653 (61%), Gaps = 34/653 (5%)
Query: 22 DELYEPLWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCR 81
D L LW AGPLV +PR G+RV+YFP+GHMEQLEAS +Q L Q++P LP+KILC+
Sbjct: 17 DALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCK 76
Query: 82 VVNVHLMAEQETDEVYAQITLVPESNQDEPTSPDPCPAEPPKPTVHSFCKVLTASDTSTH 141
V+N+ AE ETDEVYAQITL+PE +Q EPTSPD EP K TVHSFCK LTASDTSTH
Sbjct: 77 VINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTSTH 136
Query: 142 GGFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWSTF 201
GGFSVLR+HA +CLP LDMSQQ P QELVA DL EW F+HIFRGQPRRHLLTTGWS F
Sbjct: 137 GGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVF 196
Query: 202 VTSKRLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVAT 261
V+SK+LVAGD F+FLRGEN ELRVGVRR R H+GVLATA+HA+ T
Sbjct: 197 VSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITT 256
Query: 262 QTLFVVYYKPRT--SQFIISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTIVG 319
T+F V+YKPRT S+FI+SVN+YLEA K S+GMR KMRFE ++A E KRFSGTIVG
Sbjct: 257 GTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPE--KRFSGTIVG 314
Query: 320 V-EDISPHWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPTVV-KTKR 377
V E+ S W +S+WRSLKVQWDEP++V RP+RVSPWE+EP VA+ STPS QP + KR
Sbjct: 315 VQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVAN-STPSSQPQPPQRNKR 373
Query: 378 PRQPSEIPDVDTTSAASAFWDAGMKHADMTQLGVLSESKRSDVSGMWHHKQTDMNSKTNS 437
PR P +P T + D K T V S + + H S
Sbjct: 374 PRPPG-LPSPATGPSGPVTPDGVWKSPADTPSSVPLFSPPAKAATFGHGGNKSFGVSIGS 432
Query: 438 NTMSRNQTEAXXXXXXXXXXXXXXVQDTTDDSKSVCRMNIDYVLDQVDKESKVETATSYR 497
N A + T + VCR+ +++ V+ + A+
Sbjct: 433 AFWPTNADSAAESFASAFNNESTEKKQTNGN---VCRLFGFELVENVNVDECFSAASVSG 489
Query: 498 LFGIDLIDHSRNSAAAENASPHVVNVPRAEVCATASTLSKTDSGSKSDISKASXXXXXXX 557
+D S + + + P +N +SDI S
Sbjct: 490 AVAVDQPVPSNEFDSGQQSEPLNIN--------------------QSDIPSGSGDPEKSS 529
Query: 558 XXXXXXXXXXXICGRSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQ-LQHR 616
I RS TKV MQG AVGRA+DL + Y+ L +LE++FD+KG+ L+
Sbjct: 530 LRSPQESQSRQI--RSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLEST 587
Query: 617 NKWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFICSSQDVKKMSSGSKLPISS 669
KW++V+TDDE DMM+VGDDPW EFC MV++IFI + ++VKK+S +KL +++
Sbjct: 588 KKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNA 640
>AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=662
Length = 662
Score = 579 bits (1492), Expect = e-165, Method: Compositional matrix adjust.
Identities = 318/654 (48%), Positives = 401/654 (61%), Gaps = 39/654 (5%)
Query: 22 DELYEPLWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCR 81
D L LW AGPLV +PR G+RV+YFP+GHMEQLEAS +Q L Q++P LP+KILC+
Sbjct: 17 DALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCK 76
Query: 82 VVNVHLMAEQETDEVYAQITLVPESNQDEPTSPDPCPAEPPKPTVHSFCKVLTASDTSTH 141
V+N+ AE ETDEVYAQITL+PE +Q EPTSPD EP K TVHSFCK LTASDTSTH
Sbjct: 77 VINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTSTH 136
Query: 142 GGFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWSTF 201
GGFSVLR+HA +CLP LDMSQQ P QELVA DL EW F+HIFRGQPRRHLLTTGWS F
Sbjct: 137 GGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVF 196
Query: 202 VTSKRLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVAT 261
V+SK+LVAGD F+FLRGEN ELRVGVRR R H+GVLATA+HA+ T
Sbjct: 197 VSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITT 256
Query: 262 QTLFVVYYKPRT--SQFIISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTIVG 319
T+F V+YKPRT S+FI+SVN+YLEA K S+GMR KMRFE ++A E KRFSGTIVG
Sbjct: 257 GTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPE--KRFSGTIVG 314
Query: 320 V-EDISPHWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPTVV-KTKR 377
V E+ S W +S+WRSLKVQWDEP++V RP+RVSPWE+EP VA+ STPS QP + KR
Sbjct: 315 VQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVAN-STPSSQPQPPQRNKR 373
Query: 378 PRQPSEIPDVDTTSAASAFWDAGMKHADM-TQLGVLSESKRSDVSGMWHHKQTDMNSKTN 436
PR P S W + AD + + + S ++ G H
Sbjct: 374 PRPPGLPSPATGPSGPDGVWKS---PADTPSSVPLFSPPAKAATFG--HGGNKSFGVSIG 428
Query: 437 SNTMSRNQTEAXXXXXXXXXXXXXXVQDTTDDSKSVCRMNIDYVLDQVDKESKVETATSY 496
S N A + T + VCR+ +++ V+ + A+
Sbjct: 429 SAFWPTNADSAAESFASAFNNESTEKKQTNGN---VCRLFGFELVENVNVDECFSAASVS 485
Query: 497 RLFGIDLIDHSRNSAAAENASPHVVNVPRAEVCATASTLSKTDSGSKSDISKASXXXXXX 556
+D S + + + P +N +SDI S
Sbjct: 486 GAVAVDQPVPSNEFDSGQQSEPLNIN--------------------QSDIPSGSGDPEKS 525
Query: 557 XXXXXXXXXXXXICGRSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQ-LQH 615
I RS TKV MQG AVGRA+DL + Y+ L +LE++FD+KG+ L+
Sbjct: 526 SLRSPQESQSRQI--RSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLES 583
Query: 616 RNKWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFICSSQDVKKMSSGSKLPISS 669
KW++V+TDDE DMM+VGDDPW EFC MV++IFI + ++VKK+S +KL +++
Sbjct: 584 TKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNA 637
>AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=660
Length = 660
Score = 578 bits (1490), Expect = e-165, Method: Compositional matrix adjust.
Identities = 320/653 (49%), Positives = 401/653 (61%), Gaps = 39/653 (5%)
Query: 22 DELYEPLWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCR 81
D L LW AGPLV +PR G+RV+YFP+GHMEQLEAS +Q L Q++P LP+KILC+
Sbjct: 17 DALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCK 76
Query: 82 VVNVHLMAEQETDEVYAQITLVPESNQDEPTSPDPCPAEPPKPTVHSFCKVLTASDTSTH 141
V+N+ AE ETDEVYAQITL+PE +Q EPTSPD EP K TVHSFCK LTASDTSTH
Sbjct: 77 VINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTSTH 136
Query: 142 GGFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWSTF 201
GGFSVLR+HA +CLP LDMSQQ P QELVA DL EW F+HIFRGQPRRHLLTTGWS F
Sbjct: 137 GGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVF 196
Query: 202 VTSKRLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVAT 261
V+SK+LVAGD F+FLRGEN ELRVGVRR R H+GVLATA+HA+ T
Sbjct: 197 VSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITT 256
Query: 262 QTLFVVYYKPRT--SQFIISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTIVG 319
T+F V+YKPRT S+FI+SVN+YLEA K S+GMR KMRFE ++A E KRFSGTIVG
Sbjct: 257 GTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPE--KRFSGTIVG 314
Query: 320 V-EDISPHWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPTVV-KTKR 377
V E+ S W +S+WRSLKVQWDEP++V RP+RVSPWE+EP VA+ STPS QP + KR
Sbjct: 315 VQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVAN-STPSSQPQPPQRNKR 373
Query: 378 PRQPSEIPDVDTTSAASAFWDAGMKHADMTQLGVLSESKRSDVSGMWHHKQTDMNSKTNS 437
PR P +P S A+ D K T V S + + H S
Sbjct: 374 PRPPG-LP-----SPATGPSDGVWKSPADTPSSVPLFSPPAKAATFGHGGNKSFGVSIGS 427
Query: 438 NTMSRNQTEAXXXXXXXXXXXXXXVQDTTDDSKSVCRMNIDYVLDQVDKESKVETATSYR 497
N A + T + VCR+ +++ V+ + A+
Sbjct: 428 AFWPTNADSAAESFASAFNNESTEKKQTNGN---VCRLFGFELVENVNVDECFSAASVSG 484
Query: 498 LFGIDLIDHSRNSAAAENASPHVVNVPRAEVCATASTLSKTDSGSKSDISKASXXXXXXX 557
+D S + + + P +N +SDI S
Sbjct: 485 AVAVDQPVPSNEFDSGQQSEPLNIN--------------------QSDIPSGSGDPEKSS 524
Query: 558 XXXXXXXXXXXICGRSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQ-LQHR 616
I RS TKV MQG AVGRA+DL + Y+ L +LE++FD+KG+ L+
Sbjct: 525 LRSPQESQSRQI--RSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLEST 582
Query: 617 NKWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFICSSQDVKKMSSGSKLPISS 669
KW++V+TDDE DMM+VGDDPW EFC MV++IFI + ++VKK+S +KL +++
Sbjct: 583 KKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNA 635
>AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 |
chr1:13108634-13111700 FORWARD LENGTH=605
Length = 605
Score = 529 bits (1362), Expect = e-150, Method: Compositional matrix adjust.
Identities = 279/642 (43%), Positives = 384/642 (59%), Gaps = 62/642 (9%)
Query: 24 LYEPLWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCRVV 83
+YE LWKL AGPL D+P++G++V+YFPQGH+E +EAST +ELN+ P+ P+K+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPICDFPSKLQCRVI 83
Query: 84 NVHLMAEQETDEVYAQITLVPESNQDEPTSPDPCPAEPPKPTVHSFCKVLTASDTSTHGG 143
+ L E +DE YA+ITL+P++ Q + + +P V+SF KVLTASDTS HGG
Sbjct: 84 AIQLKVENNSDETYAEITLMPDTTQVVIPTQN---QNQFRPLVNSFTKVLTASDTSVHGG 140
Query: 144 FSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWSTFVT 203
FSV +KHA ECLP LDMSQ PTQE++A DL G +WRF+HI+RG +RHLLT GW+ F T
Sbjct: 141 FSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLTIGWNAFTT 200
Query: 204 SKRLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVATQT 263
SK+LV GD VF+RGE GELRVG+RR G++A+A HA Q
Sbjct: 201 SKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHGIIASAKHAFDNQC 260
Query: 264 LFVVYYKPRTSQFIISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTIVGVEDI 323
+F+V YKPR+SQFI+S +K+L+ +NNKF++G R MRFE DD SE +R GTI+GV D
Sbjct: 261 MFIVVYKPRSSQFIVSYDKFLDVVNNKFNVGSRFTMRFEGDDFSE--RRSFGTIIGVSDF 318
Query: 324 SPHWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPTVVKTKRPRQPSE 383
SPHW S+WRSL+VQWDE A+ RP++VSPW+IE ++ + + +K KR R+ +E
Sbjct: 319 SPHWKCSEWRSLEVQWDEFASFPRPNQVSPWDIEHLTPWSNVS--RSSFLKNKRSREVNE 376
Query: 384 IPDVDTTSAASAFWDAGMKHADMTQLGVLSESKRSDVSGMWHHKQTDMNSKTNSNTMSRN 443
I S++S + ++G Q M + N + R+
Sbjct: 377 I-----GSSSSHLLPPTLTQGQ--EIG-----------------QQSMATPMNISLRYRD 412
Query: 444 QTEAXXXXXXXXXXXXXXVQDTTDDSKSVCRMNIDYVLDQVDKESKVETATSYRLFGIDL 503
TE + + ++N + V+ +++ S+RLFG+ L
Sbjct: 413 ITEDAMTPSRLLMSYPV---------QPMAKLNYNNVVTPIEENITTNAVASFRLFGVSL 463
Query: 504 IDHSRNSAAAENASPHVVNVPRAEVCATASTLSKTDSGSKSDISKASXXXXXXXXXXXXX 563
A+P V+ P ++ S L++ +S I ++
Sbjct: 464 ------------ATPSVIKDPVEQIGLEISRLTQEKKFGQSQILRSPTEIQSKQFSST-- 509
Query: 564 XXXXXICGRSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQLQHRNKWEIVF 623
R+ TKVQMQGV +GRAVDL+ L+GYDQLI ELE+LFDLKGQLQ RN+WEI F
Sbjct: 510 --------RTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQARNQWEIAF 561
Query: 624 TDDEGDMMLVGDDPWPEFCNMVKRIFICSSQDVKKMSSGSKL 665
T++E D MLVG+DPWPEFCNMVK+IFI S ++VK + S L
Sbjct: 562 TNNEEDKMLVGEDPWPEFCNMVKKIFIYSKEEVKNLKSRKSL 603
>AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 |
chr1:12556005-12559082 FORWARD LENGTH=598
Length = 598
Score = 525 bits (1351), Expect = e-149, Method: Compositional matrix adjust.
Identities = 281/641 (43%), Positives = 388/641 (60%), Gaps = 91/641 (14%)
Query: 24 LYEPLWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCRVV 83
+YE LWKL AGPL D+P++G++++YFPQG++E +EAST +ELN+ P+ LP+K+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKPICDLPSKLQCRVI 83
Query: 84 NVHLMAEQETDEVYAQITLVPESNQDE-PTSPDPCPAEPPKPTVHSFCKVLTASDTSTHG 142
+ L E +DE YA+ITL+P++ Q PT + +P V+SF KVLTASDTS G
Sbjct: 84 AIQLKVENNSDETYAEITLMPDTTQVVIPTQNE----NQFRPLVNSFTKVLTASDTS--G 137
Query: 143 GFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWSTFV 202
GF V +KHA ECLP LDMSQ PTQEL+A DL G +WRF H +RG P+RHLLTTGW+ F
Sbjct: 138 GFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTTGWNAFT 197
Query: 203 TSKRLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVATQ 262
TSK+LVAGD VF+RGE GELRVG+RR GV+A+A HA Q
Sbjct: 198 TSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIASAKHAFDNQ 257
Query: 263 TLFVVYYKPRTSQFIISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTIVGVED 322
+F+V YKPR+SQFI+S +K+L+A+NNKF++G R MRFE DD SE +R+ GTI+GV D
Sbjct: 258 CMFIVVYKPRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSE--RRYFGTIIGVSD 315
Query: 323 ISPHWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPTVVKTKRPRQPS 382
SPHW S+WR+L+VQWDE A+ +RP++VSPWEIE + + + P +P+++K KR R+ +
Sbjct: 316 FSPHWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHLMPALNVP--RPSLLKNKRLREVN 373
Query: 383 EIPDVDTTSAASAFWDAGMKHADMTQLGVLSESKRSDVSGMWHHKQTDMNSKTNSNTMSR 442
EI S++S + ++G LS + ++S +
Sbjct: 374 EI-----GSSSSHLLPPILTQGQ--EIGQLSVASPMNISLTY------------------ 408
Query: 443 NQTEAXXXXXXXXXXXXXXVQDTTDDSKSVCRMNIDY-------------VLDQVDKESK 489
+DTT+D + R+ + Y ++ Q+++
Sbjct: 409 --------------------RDTTEDVMNPSRLLMSYPVQPMPKLNYNNQMVTQIEENIT 448
Query: 490 VETATSYRLFGIDLIDHSRNSAAAENASPHVVNVPRAEVCATASTLSKTDSGSKSDISKA 549
+T T++RLFG+ L+ +P V+ P E+ + S L++ +S ++
Sbjct: 449 TKTGTNFRLFGVSLV------------TPSVIKDPIEEIGSEISKLTEGKKFGQSQTLRS 496
Query: 550 SXXXXXXXXXXXXXXXXXXICGRSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDL 609
R+ TKVQMQGV + RAVDL+ L+GYDQLI ELE+LFDL
Sbjct: 497 PTEIQSKQFSST----------RTCTKVQMQGVTIERAVDLSVLNGYDQLILELEELFDL 546
Query: 610 KGQLQHRNKWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFI 650
KGQLQ RN+WEI FTD + D MLVGDDPWPEFCNMVK+I I
Sbjct: 547 KGQLQTRNQWEIAFTDSDDDKMLVGDDPWPEFCNMVKKILI 587
>AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 |
chr2:19104993-19108029 FORWARD LENGTH=601
Length = 601
Score = 524 bits (1349), Expect = e-149, Method: Compositional matrix adjust.
Identities = 254/364 (69%), Positives = 288/364 (79%), Gaps = 3/364 (0%)
Query: 22 DELYEPLWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQEL-NQRIPLLKLPTKILC 80
DELY LWK AGPLV+VPR G+RVFYFPQGHMEQL ASTNQ + +Q IP+ LP KILC
Sbjct: 16 DELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPPKILC 75
Query: 81 RVVNVHLMAEQETDEVYAQITLVPESNQDEPTSPDPCPAEPPKPTVHSFCKVLTASDTST 140
RV++V L AE ETDEVYAQITL PE +Q EPTS DP EP KPTV SF K+LTASDTST
Sbjct: 76 RVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPTVDSFVKILTASDTST 135
Query: 141 HGGFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWST 200
HGGFSVLRKHATECLP+LDM+Q TPTQELVA+DL GYEWRFKHIFRGQPRRHLLTTGWST
Sbjct: 136 HGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWST 195
Query: 201 FVTSKRLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVA 260
FVTSKRLVAGD FVFLRGE G+LRVGVRRLA+ LGVLATASHAV
Sbjct: 196 FVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVT 255
Query: 261 TQTLFVVYYKPRTSQFIISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTIVGV 320
T T+FVV+YKPR SQFIISVNKY+ AM N FSLGMR +MRFE +++ E + F+GTI+G
Sbjct: 256 TTTIFVVFYKPRISQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPE--RIFTGTIIGS 313
Query: 321 EDISPHWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPTVVKTKRPRQ 380
D+S W SKWRSL++QWDEP+++ RP++VSPWEIEPF SA TP+ K+KR R
Sbjct: 314 GDLSSQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPTPTQQQSKSKRSRP 373
Query: 381 PSEI 384
SEI
Sbjct: 374 ISEI 377
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 83/109 (76%), Gaps = 4/109 (3%)
Query: 572 RSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQLQHRNKWEIVFTDDEGDMM 631
RSR KVQMQG AVGRAVDL L YD+LI ELE++F+++G+L ++KW IVFTDDEGD M
Sbjct: 490 RSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELSPKDKWAIVFTDDEGDRM 549
Query: 632 LVGDDPWPEFCNMVKRIFICSSQDVKKMSSGSKLPISSMEEGTVISSET 680
LVGDDPW EFC M K++FI S +VKKM S S L ++GT+++ E+
Sbjct: 550 LVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSLL----GDKGTIVNLES 594
>AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105112-19108029 FORWARD LENGTH=622
Length = 622
Score = 523 bits (1347), Expect = e-148, Method: Compositional matrix adjust.
Identities = 254/364 (69%), Positives = 288/364 (79%), Gaps = 3/364 (0%)
Query: 22 DELYEPLWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQEL-NQRIPLLKLPTKILC 80
DELY LWK AGPLV+VPR G+RVFYFPQGHMEQL ASTNQ + +Q IP+ LP KILC
Sbjct: 37 DELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPPKILC 96
Query: 81 RVVNVHLMAEQETDEVYAQITLVPESNQDEPTSPDPCPAEPPKPTVHSFCKVLTASDTST 140
RV++V L AE ETDEVYAQITL PE +Q EPTS DP EP KPTV SF K+LTASDTST
Sbjct: 97 RVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPTVDSFVKILTASDTST 156
Query: 141 HGGFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWST 200
HGGFSVLRKHATECLP+LDM+Q TPTQELVA+DL GYEWRFKHIFRGQPRRHLLTTGWST
Sbjct: 157 HGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWST 216
Query: 201 FVTSKRLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVA 260
FVTSKRLVAGD FVFLRGE G+LRVGVRRLA+ LGVLATASHAV
Sbjct: 217 FVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVT 276
Query: 261 TQTLFVVYYKPRTSQFIISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTIVGV 320
T T+FVV+YKPR SQFIISVNKY+ AM N FSLGMR +MRFE +++ E + F+GTI+G
Sbjct: 277 TTTIFVVFYKPRISQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPE--RIFTGTIIGS 334
Query: 321 EDISPHWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPTVVKTKRPRQ 380
D+S W SKWRSL++QWDEP+++ RP++VSPWEIEPF SA TP+ K+KR R
Sbjct: 335 GDLSSQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPTPTQQQSKSKRSRP 394
Query: 381 PSEI 384
SEI
Sbjct: 395 ISEI 398
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 110/195 (56%), Gaps = 25/195 (12%)
Query: 486 KESKVETATSYRLFGIDLIDHSRNSAAAENASPHVVNVPRAEVCATASTLSKTDSGSKSD 545
K ++ +S RLFG DL S A PH ++ + S +S DS +K
Sbjct: 446 KITEAPVTSSCRLFGFDL-----TSKPASATIPH-----DKQLISVDSNIS--DSTTKCQ 493
Query: 546 ISKASXXXXXXXXXXXXXXXXXXICGRSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQ 605
+S RSR KVQMQG AVGRAVDL L YD+LI ELE+
Sbjct: 494 DPNSSNSPKEQKQQTST---------RSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEK 544
Query: 606 LFDLKGQLQHRNKWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFICSSQDVKKMSSGSKL 665
+F+++G+L ++KW IVFTDDEGD MLVGDDPW EFC M K++FI S +VKKM S S L
Sbjct: 545 MFEIEGELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSLL 604
Query: 666 PISSMEEGTVISSET 680
++GT+++ E+
Sbjct: 605 ----GDKGTIVNLES 615
>AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 |
chr1:12577722-12580824 FORWARD LENGTH=606
Length = 606
Score = 516 bits (1329), Expect = e-146, Method: Compositional matrix adjust.
Identities = 276/636 (43%), Positives = 389/636 (61%), Gaps = 65/636 (10%)
Query: 24 LYEPLWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCRVV 83
+YE LWKL AGPL D+P++G+ V+YFPQG++E ++AST +ELN+ P+ LP+K+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQPICDLPSKLQCRVI 83
Query: 84 NVHLMAEQETDEVYAQITLVPESNQDE-PTSPDPCPAEPPKPTVHSFCKVLTASDTSTHG 142
+HL E +DE+YA+ITL+P++ Q PT + +P V+SF KVLTASDTS +G
Sbjct: 84 AIHLKVENNSDEIYAEITLMPDTTQVVIPTQSE----NRFRPLVNSFTKVLTASDTSAYG 139
Query: 143 GFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWSTFV 202
GFSV +KHA ECLP LDMSQ P QE++A DL +WRF+H +RG P+RH LTTGW+ F+
Sbjct: 140 GFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGWNEFI 199
Query: 203 TSKRLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVATQ 262
TSK+LV GD VF+RGE GELRVG+RR GV+A+A HA Q
Sbjct: 200 TSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQ 259
Query: 263 TLFVVYYKPRTSQFIISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTIVGVED 322
+F+V YKPR+SQFI+S +K+L+A+NNKF++G R MRFE DD SE +R+ GTI+GV D
Sbjct: 260 CIFIVVYKPRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSE--RRYFGTIIGVSD 317
Query: 323 ISPHWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPTVVKTKRPRQPS 382
SPHW S+WRSL+VQWDE A+ +RP++VSPWEIE V + + P + +++K KR R+ +
Sbjct: 318 FSPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPALNVP--RSSLLKNKRLREVN 375
Query: 383 EIPDVDTTSAASAFWDAGMKHADMTQLGVLSESKRSDVSGMWHHKQTDMNSKTNSNTMSR 442
E S++S + ++G LS + S N + R
Sbjct: 376 EF-----GSSSSHLLPPILTQGQ--EIGQLS-----------------VASPMNISLRYR 411
Query: 443 NQTEAXXXXXXXXXXXXXXVQDTTDDSKSVCRMNI-DYVLDQVDKESKVETATSYRLFGI 501
+ TEA + + ++N + ++ Q+++ + T++RLFG+
Sbjct: 412 DTTEAAMNPSRLLMSYPV---------QPMPKLNYNNQMVTQIEENITTKAGTNFRLFGV 462
Query: 502 DLIDHSRNSAAAENASPHVVNVPRAEVCATASTLSKTDSGSKSDISKASXXXXXXXXXXX 561
L +P ++ P ++ + S L++ +S ++
Sbjct: 463 TL------------DTPPMIKDPIKQIGSDISKLTERKKFGQSQTLRSPIEIQSKQFSS- 509
Query: 562 XXXXXXXICGRSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQLQHRNKWEI 621
R+ TKVQMQGV +GRAVDL+ L+GYDQLI ELE+LFD+KGQLQ RN+W+I
Sbjct: 510 ---------SRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQWKI 560
Query: 622 VFTDDEGDMMLVGDDPWPEFCNMVKRIFICSSQDVK 657
FTD +G MLVGDDPWPEFC MVK+I I S ++VK
Sbjct: 561 AFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 596
>AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 |
chr1:13082819-13085830 REVERSE LENGTH=598
Length = 598
Score = 513 bits (1322), Expect = e-145, Method: Compositional matrix adjust.
Identities = 275/646 (42%), Positives = 385/646 (59%), Gaps = 94/646 (14%)
Query: 24 LYEPLWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCRVV 83
+YE LWKL AGPL D+P++G++V+YFPQG++E +EAST +ELN+ P+ LP+K+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQPICDLPSKLQCRVI 83
Query: 84 NVHLMAEQETDEVYAQITLVPESNQDE------PTSPDPCPAEPPKPTVHSFCKVLTASD 137
+HL E +DE YA+ITL+P++ E PT + +P V+SF KVLTASD
Sbjct: 84 AIHLKVENNSDETYAKITLMPDTTVSENLQVVIPTQNE----NQFRPLVNSFTKVLTASD 139
Query: 138 TSTHGGFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTG 197
S +G FSV +KHA ECLP LDMSQ P QEL+A DL G +W F+H +RG P+RHLLTTG
Sbjct: 140 ISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTG 199
Query: 198 WSTFVTSKRLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASH 257
W+ F TSK+LV GD VF+RGE GELRVG+RR GV+A+A H
Sbjct: 200 WNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKH 259
Query: 258 AVATQTLFVVYYKPRTSQFIISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTI 317
A Q +F+V YKPR+SQFI+S +K+L+A+NNKF++G R MRFE DD SE +R+ GTI
Sbjct: 260 AFDNQCMFIVVYKPRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDLSE--RRYFGTI 317
Query: 318 VGVEDISPHWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPTVVKTKR 377
+GV + SPHW S WRSL+VQWDE A+ RP++VSPWEIE + + + P + + +K KR
Sbjct: 318 IGVSNFSPHWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHLMPALNVP--RSSFLKNKR 375
Query: 378 PRQPSEIPDVDTTSAASAFWDAGMKHADMTQLGVLSESKRSDVSGMWHHKQTDMNSKTNS 437
R+ +E S++S + ++G LS + ++S ++
Sbjct: 376 LREVNEF-----GSSSSHLLPPILTQGQ--EIGQLSVASPMNISLLY------------- 415
Query: 438 NTMSRNQTEAXXXXXXXXXXXXXXVQDTTDDSKSVCRMNIDY-------------VLDQV 484
++TT+D+ + R+ + Y ++ Q+
Sbjct: 416 -------------------------RETTEDAMNPSRLLMSYPVQPMPKRNYNNQMVTQI 450
Query: 485 DKESKVETATSYRLFGIDLIDHSRNSAAAENASPHVVNVPRAEVCATASTLSKTDSGSKS 544
++ + T++RLFG+ L A+P V+ P ++ + S L++ +S
Sbjct: 451 EENITTKAGTNFRLFGVSL------------ATPPVIKDPIEQIGSDISKLTEGKKFGQS 498
Query: 545 DISKASXXXXXXXXXXXXXXXXXXICGRSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELE 604
++ R+ TKVQMQGV +GRAVDL+ L+GYDQLI ELE
Sbjct: 499 QTLRSPTKIQSKQFSST----------RTCTKVQMQGVTIGRAVDLSVLNGYDQLILELE 548
Query: 605 QLFDLKGQLQHRNKWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFI 650
+LFDLKGQLQ RN+W+I+FT + D MLVGDDPWPEFCNMVKRI+I
Sbjct: 549 KLFDLKGQLQTRNQWKIIFTGSDEDEMLVGDDPWPEFCNMVKRIYI 594
>AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 |
chr1:12508548-12511520 REVERSE LENGTH=593
Length = 593
Score = 513 bits (1322), Expect = e-145, Method: Compositional matrix adjust.
Identities = 282/637 (44%), Positives = 384/637 (60%), Gaps = 81/637 (12%)
Query: 24 LYEPLWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCRVV 83
+YE LWKL AGPL D+P++G++V+YFPQGH+E +E ST +ELN+ P+ LP+K+ CRV+
Sbjct: 24 VYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQPICDLPSKLQCRVI 83
Query: 84 NVHLMAEQETDEVYAQITLVPESNQDE-PTSPDPCPAEPPKPTVHSFCKVLTASDTSTHG 142
+HL E +DE YA+ITL+P++ Q PT + +P V+SF KVLTASDTS HG
Sbjct: 84 AIHLKVENNSDETYAEITLMPDTTQVVIPTQNE----NQFRPLVNSFTKVLTASDTSAHG 139
Query: 143 GFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWSTFV 202
GF V +KHA ECLP+LDMSQ P QEL+A DL G +WRF H +RG P+RHLLTTGW+ F
Sbjct: 140 GFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLLTTGWNAFT 199
Query: 203 TSKRLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVATQ 262
TSK+LVAGD VF+RGE GELRVG+RR GV+A+A HA Q
Sbjct: 200 TSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVVASAKHAFDNQ 259
Query: 263 TLFVVYYKPRTSQFIISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTIVGVED 322
+F V YKPR+S+FI+S +K+L+A+NNKF++G R MR E DD SE +R GTI+GV D
Sbjct: 260 CMFTVVYKPRSSKFIVSYDKFLDAVNNKFNVGSRFTMRLEGDDFSE--RRCFGTIIGVSD 317
Query: 323 ISPHWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPTVVKTKRPRQPS 382
SPHW S+WRSL+VQWDE + P +VSPW+IE + + + P + ++K KR R+ +
Sbjct: 318 FSPHWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHLMPAINVP--RSFLLKNKRLREVN 375
Query: 383 EIPDVDTTSAASAFWDAGMKHADMTQLGVLSESKRSDVSGMWHHKQTDMNSKTNSNTMSR 442
EI S++S +L++ + ++ Q + S N + R
Sbjct: 376 EI-----GSSSSHLLPP-----------ILTQGQENE--------QLSVASPMNISLRYR 411
Query: 443 NQTEAXXXXXXXXXXXXXXVQDTTDDSKSVC--------RMNI-DYVLDQVDKESKVETA 493
+ TE D + SK + ++N + ++ ++++ +T
Sbjct: 412 DATE-----------------DAMNPSKLLMSYPVQPMPKLNYNNQMVTEMEENITTKTG 454
Query: 494 TSYRLFGIDLIDHSRNSAAAENASPHVVNVPRAEVCATASTLSKTDSGSKSDISKASXXX 553
T++RLFG+ L +P V+ P E+ S +SK G K +S+
Sbjct: 455 TNFRLFGVTL------------DTPPVIKDPIEEI---GSEISKLTEGKKFGLSQTLRSP 499
Query: 554 XXXXXXXXXXXXXXXICGRSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQL 613
R+ TKVQMQGV +GRAVDL+ L+GYDQLI ELE+LFD+KGQL
Sbjct: 500 TEIQNKQFSS-------SRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQL 552
Query: 614 QHRNKWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFI 650
Q RN+WEI FTD + D MLVGDDPWPEFCNMVK+IFI
Sbjct: 553 QTRNQWEIAFTDSDEDKMLVGDDPWPEFCNMVKKIFI 589
>AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 |
chr3:22888171-22891179 FORWARD LENGTH=602
Length = 602
Score = 511 bits (1316), Expect = e-145, Method: Compositional matrix adjust.
Identities = 249/365 (68%), Positives = 287/365 (78%), Gaps = 6/365 (1%)
Query: 22 DELYEPLWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELN-QRIPLLKLPTKILC 80
D+LY LWK+ AGPLV+VPR +RVFYFPQGHMEQL ASTNQ +N + IP+ LP KILC
Sbjct: 20 DQLYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVFDLPPKILC 79
Query: 81 RVVNVHLMAEQETDEVYAQITLVPESNQDEPTSPDPCPAEPPKPTVHSFCKVLTASDTST 140
RV++V L AE ETDEVYAQITL PE +Q EPTS DP P K HSF K+LTASDTST
Sbjct: 80 RVLDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPIVGPTKQEFHSFVKILTASDTST 139
Query: 141 HGGFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWST 200
HGGFSVLRKHATECLP+LDM+Q TPTQELV +DL G+EWRFKHIFRGQPRRHLLTTGWST
Sbjct: 140 HGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWST 199
Query: 201 FVTSKRLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVA 260
FV+SKRLVAGD FVFLRGENG+LRVGVRRLAR HLGVLATASHAV
Sbjct: 200 FVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVR 259
Query: 261 TQTLFVVYYKPRTSQFIISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTIVGV 320
T T+FVV+YKPR SQFI+ VNKY+EA+ + FSLG R +MRFE +++ E + F+GTIVG
Sbjct: 260 TTTIFVVFYKPRISQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPE--RIFTGTIVGS 317
Query: 321 EDISPHWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASA--STPSVQP-TVVKTKR 377
D+S W SKWRSL+VQWDEP V RPD+VSPWEIEPF+A++ STP+ QP + K R
Sbjct: 318 GDLSSQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPISTPAQQPQSKCKRSR 377
Query: 378 PRQPS 382
P +PS
Sbjct: 378 PIEPS 382
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 109/191 (57%), Gaps = 29/191 (15%)
Query: 492 TATSYRLFGIDLIDHSRNSAAAENASPHVVNVPRAEVCATASTLSKTDSGSKSDISKASX 551
T SYRLFG DL +S + ++ P + C A S S+ K
Sbjct: 436 TNCSYRLFGFDLTSNS-PAPIPQDKQP-------MDTCGAAKCQEPITPTSMSEQKKQQ- 486
Query: 552 XXXXXXXXXXXXXXXXXICGRSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKG 611
RSRTKVQMQG+AVGRAVDL L YD+LIDELE++F+++G
Sbjct: 487 ------------------TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQG 528
Query: 612 QLQHRNKWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFICSSQDVKKMSSGSKLPISSME 671
QL R+KW +VFTDDEGDMML GDDPW EFC M K+IFI SS +VKKM+ +KL ISS
Sbjct: 529 QLLARDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMT--TKLKISSSL 586
Query: 672 EGTVISSETTE 682
E +E+ E
Sbjct: 587 ENEEYGNESFE 597
>AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 471 bits (1211), Expect = e-132, Method: Compositional matrix adjust.
Identities = 227/361 (62%), Positives = 273/361 (75%), Gaps = 10/361 (2%)
Query: 24 LYEPLWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCRVV 83
LY LW AGPLV VPR RVFYFPQGH+EQ+EASTNQ Q++PL LP+K+LCRV+
Sbjct: 58 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 117
Query: 84 NVHLMAEQETDEVYAQITLVPESNQDEPTSPDPCP-AEPPKPTVHSFCKVLTASDTSTHG 142
NV L AE +TDEVYAQITL+PE+NQDE P PP+ VHSFCK LTASDTSTHG
Sbjct: 118 NVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTSTHG 177
Query: 143 GFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWSTFV 202
GFSVLR+HA ECLP LDMS+Q PTQELVAKDL EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 178 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFV 237
Query: 203 TSKRLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVATQ 262
+SKRLVAGD F+FLRGENGELRVGVRR R HLGVLATA HA++T
Sbjct: 238 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 297
Query: 263 TLFVVYYKPRT--SQFIISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTIVGV 320
T+F VYYKPRT S+FI+ ++Y+E++ N +S+GMR KMRFE ++A E +RF+GTIVG+
Sbjct: 298 TMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE--QRFTGTIVGI 355
Query: 321 EDISP-HWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPT-VVKTKRP 378
E+ P W SKWRSLKV+WDE +++ RPDRVSPW++EP +A P++ P + + KRP
Sbjct: 356 EESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRPKRP 412
Query: 379 R 379
R
Sbjct: 413 R 413
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 76/105 (72%), Gaps = 2/105 (1%)
Query: 572 RSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQLQHRNK-WEIVFTDDEGDM 630
RS TKV QG+A+GR+VDL+ Y++L+ EL++LF+ G+L K W IV+TD+E DM
Sbjct: 733 RSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDM 792
Query: 631 MLVGDDPWPEFCNMVKRIFICSSQDVKKMSSGSKLPISSMEEGTV 675
MLVGDDPW EFC MV++IFI + ++V+KM+ G+ L S EE V
Sbjct: 793 MLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGT-LSCRSEEEAVV 836
>AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 471 bits (1211), Expect = e-132, Method: Compositional matrix adjust.
Identities = 227/361 (62%), Positives = 273/361 (75%), Gaps = 10/361 (2%)
Query: 24 LYEPLWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCRVV 83
LY LW AGPLV VPR RVFYFPQGH+EQ+EASTNQ Q++PL LP+K+LCRV+
Sbjct: 58 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 117
Query: 84 NVHLMAEQETDEVYAQITLVPESNQDEPTSPDPCP-AEPPKPTVHSFCKVLTASDTSTHG 142
NV L AE +TDEVYAQITL+PE+NQDE P PP+ VHSFCK LTASDTSTHG
Sbjct: 118 NVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTSTHG 177
Query: 143 GFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWSTFV 202
GFSVLR+HA ECLP LDMS+Q PTQELVAKDL EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 178 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFV 237
Query: 203 TSKRLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVATQ 262
+SKRLVAGD F+FLRGENGELRVGVRR R HLGVLATA HA++T
Sbjct: 238 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 297
Query: 263 TLFVVYYKPRT--SQFIISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTIVGV 320
T+F VYYKPRT S+FI+ ++Y+E++ N +S+GMR KMRFE ++A E +RF+GTIVG+
Sbjct: 298 TMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE--QRFTGTIVGI 355
Query: 321 EDISP-HWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPT-VVKTKRP 378
E+ P W SKWRSLKV+WDE +++ RPDRVSPW++EP +A P++ P + + KRP
Sbjct: 356 EESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRPKRP 412
Query: 379 R 379
R
Sbjct: 413 R 413
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 76/105 (72%), Gaps = 2/105 (1%)
Query: 572 RSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQLQHRNK-WEIVFTDDEGDM 630
RS TKV QG+A+GR+VDL+ Y++L+ EL++LF+ G+L K W IV+TD+E DM
Sbjct: 733 RSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDM 792
Query: 631 MLVGDDPWPEFCNMVKRIFICSSQDVKKMSSGSKLPISSMEEGTV 675
MLVGDDPW EFC MV++IFI + ++V+KM+ G+ L S EE V
Sbjct: 793 MLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGT-LSCRSEEEAVV 836
>AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 471 bits (1211), Expect = e-132, Method: Compositional matrix adjust.
Identities = 227/361 (62%), Positives = 273/361 (75%), Gaps = 10/361 (2%)
Query: 24 LYEPLWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCRVV 83
LY LW AGPLV VPR RVFYFPQGH+EQ+EASTNQ Q++PL LP+K+LCRV+
Sbjct: 58 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 117
Query: 84 NVHLMAEQETDEVYAQITLVPESNQDEPTSPDPCP-AEPPKPTVHSFCKVLTASDTSTHG 142
NV L AE +TDEVYAQITL+PE+NQDE P PP+ VHSFCK LTASDTSTHG
Sbjct: 118 NVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTSTHG 177
Query: 143 GFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWSTFV 202
GFSVLR+HA ECLP LDMS+Q PTQELVAKDL EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 178 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFV 237
Query: 203 TSKRLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVATQ 262
+SKRLVAGD F+FLRGENGELRVGVRR R HLGVLATA HA++T
Sbjct: 238 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 297
Query: 263 TLFVVYYKPRT--SQFIISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTIVGV 320
T+F VYYKPRT S+FI+ ++Y+E++ N +S+GMR KMRFE ++A E +RF+GTIVG+
Sbjct: 298 TMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE--QRFTGTIVGI 355
Query: 321 EDISP-HWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPT-VVKTKRP 378
E+ P W SKWRSLKV+WDE +++ RPDRVSPW++EP +A P++ P + + KRP
Sbjct: 356 EESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRPKRP 412
Query: 379 R 379
R
Sbjct: 413 R 413
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 76/105 (72%), Gaps = 2/105 (1%)
Query: 572 RSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQLQHRNK-WEIVFTDDEGDM 630
RS TKV QG+A+GR+VDL+ Y++L+ EL++LF+ G+L K W IV+TD+E DM
Sbjct: 733 RSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDM 792
Query: 631 MLVGDDPWPEFCNMVKRIFICSSQDVKKMSSGSKLPISSMEEGTV 675
MLVGDDPW EFC MV++IFI + ++V+KM+ G+ L S EE V
Sbjct: 793 MLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGT-LSCRSEEEAVV 836
>AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 |
chr5:24910859-24914873 FORWARD LENGTH=853
Length = 853
Score = 470 bits (1209), Expect = e-132, Method: Compositional matrix adjust.
Identities = 227/361 (62%), Positives = 273/361 (75%), Gaps = 10/361 (2%)
Query: 24 LYEPLWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCRVV 83
LY LW AGPLV VPR RVFYFPQGH+EQ+EASTNQ Q++PL LP+K+LCRV+
Sbjct: 58 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 117
Query: 84 NVHLMAEQETDEVYAQITLVPESNQDEPTSPDPCP-AEPPKPTVHSFCKVLTASDTSTHG 142
NV L AE +TDEVYAQITL+PE+NQDE P PP+ VHSFCK LTASDTSTHG
Sbjct: 118 NVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTSTHG 177
Query: 143 GFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWSTFV 202
GFSVLR+HA ECLP LDMS+Q PTQELVAKDL EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 178 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFV 237
Query: 203 TSKRLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVATQ 262
+SKRLVAGD F+FLRGENGELRVGVRR R HLGVLATA HA++T
Sbjct: 238 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 297
Query: 263 TLFVVYYKPRT--SQFIISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTIVGV 320
T+F VYYKPRT S+FI+ ++Y+E++ N +S+GMR KMRFE ++A E +RF+GTIVG+
Sbjct: 298 TMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE--QRFTGTIVGI 355
Query: 321 EDISP-HWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPT-VVKTKRP 378
E+ P W SKWRSLKV+WDE +++ RPDRVSPW++EP +A P++ P + + KRP
Sbjct: 356 EESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRPKRP 412
Query: 379 R 379
R
Sbjct: 413 R 413
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 75/103 (72%), Gaps = 2/103 (1%)
Query: 572 RSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQLQHRNK-WEIVFTDDEGDM 630
RS TKV QG+A+GR+VDL+ Y++L+ EL++LF+ G+L K W IV+TD+E DM
Sbjct: 733 RSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDM 792
Query: 631 MLVGDDPWPEFCNMVKRIFICSSQDVKKMSSGSKLPISSMEEG 673
MLVGDDPW EFC MV++IFI + ++V+KM+ G+ L S EE
Sbjct: 793 MLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGT-LSCRSEEEA 834
>AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105511-19108029 FORWARD LENGTH=514
Length = 514
Score = 397 bits (1021), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/288 (67%), Positives = 222/288 (77%), Gaps = 4/288 (1%)
Query: 99 QITLVPESNQD--EPTSPDPCPAEPPKPTVHSFCKVLTASDTSTHGGFSVLRKHATECLP 156
+ TL NQ EPTS DP EP KPTV SF K+LTASDTSTHGGFSVLRKHATECLP
Sbjct: 5 RFTLRSHYNQKKIEPTSLDPPLVEPAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLP 64
Query: 157 ALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFL 216
+LDM+Q TPTQELVA+DL GYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD FVFL
Sbjct: 65 SLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFL 124
Query: 217 RGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVATQTLFVVYYKPRTSQF 276
RGE G+LRVGVRRLA+ LGVLATASHAV T T+FVV+YKPR SQF
Sbjct: 125 RGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRISQF 184
Query: 277 IISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTIVGVEDISPHWVNSKWRSLK 336
IISVNKY+ AM N FSLGMR +MRFE +++ E + F+GTI+G D+S W SKWRSL+
Sbjct: 185 IISVNKYMMAMKNGFSLGMRYRMRFEGEESPE--RIFTGTIIGSGDLSSQWPASKWRSLQ 242
Query: 337 VQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPTVVKTKRPRQPSEI 384
+QWDEP+++ RP++VSPWEIEPF SA TP+ K+KR R SEI
Sbjct: 243 IQWDEPSSIQRPNKVSPWEIEPFSPSALTPTPTQQQSKSKRSRPISEI 290
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 83/109 (76%), Gaps = 4/109 (3%)
Query: 572 RSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQLQHRNKWEIVFTDDEGDMM 631
RSR KVQMQG AVGRAVDL L YD+LI ELE++F+++G+L ++KW IVFTDDEGD M
Sbjct: 403 RSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELSPKDKWAIVFTDDEGDRM 462
Query: 632 LVGDDPWPEFCNMVKRIFICSSQDVKKMSSGSKLPISSMEEGTVISSET 680
LVGDDPW EFC M K++FI S +VKKM S S L ++GT+++ E+
Sbjct: 463 LVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSLL----GDKGTIVNLES 507
>AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 |
chr1:12927457-12930523 REVERSE LENGTH=590
Length = 590
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/389 (49%), Positives = 268/389 (68%), Gaps = 17/389 (4%)
Query: 24 LYEPLWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCRVV 83
+YE LWKL AGPL D+P++G+ V+YFPQG++E ++AST +ELN+ P+ LP+K+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQPICDLPSKLQCRVI 83
Query: 84 NVHLMAEQETDEVYAQITLVPESNQDE-PTSPDPCPAEPPKPTVHSFCKVLTASDTSTHG 142
+HL E +DE YA+ITL+P++ Q PT + +P V+SF KVLTASDTS +G
Sbjct: 84 AIHLKVENNSDETYAEITLMPDTTQVVIPTQSE----NQFRPLVNSFTKVLTASDTSAYG 139
Query: 143 GFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWSTFV 202
GF V +KHA ECLP L + P QEL+AKDL G +WRF+H +RG P+RH LTTGW+ F
Sbjct: 140 GFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQRHSLTTGWNEFT 195
Query: 203 TSKRLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVATQ 262
TSK+LV GD VF+RGE GELRVG+RR GV+A+A HA+ Q
Sbjct: 196 TSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHALDNQ 255
Query: 263 TLFVVYYKP--RTSQFIISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTIVGV 320
+F+V YKP R+SQFI+S +K+L+AMNNKF +G R MRFE DD SE +R+ GTI+GV
Sbjct: 256 CIFIVVYKPSIRSSQFIVSYDKFLDAMNNKFIVGSRFTMRFEGDDFSE--RRYFGTIIGV 313
Query: 321 EDISPHWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPTVVKTKRPRQ 380
D SPHW S+WRSL+VQWDE A+ +RP++VSPWEIE +++ + P + +++K KR R+
Sbjct: 314 NDFSPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMSALNVP--RSSLLKNKRLRE 371
Query: 381 PSEI-PDVDTTSAASAFWDAGMKHADMTQ 408
+E ++ S AS + +++ D T+
Sbjct: 372 VNEFGQEIGQLSVASPM-NTSLRYRDTTE 399
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 117/208 (56%), Gaps = 35/208 (16%)
Query: 463 QDTTDDSKSVCRMNIDY-------------VLDQVDKESKVETATSYRLFGIDLIDHSRN 509
+DTT+D+ + R+ + Y ++ Q+++ + T++RLFG+ L
Sbjct: 395 RDTTEDAMNPSRLLMSYPVQPMPKLNYNNQMVTQIEENITTKAVTNFRLFGVSL------ 448
Query: 510 SAAAENASPHVVNVPRAEVCATASTLSKTDSGSKSDISKASXXXXXXXXXXXXXXXXXXI 569
A P V+ P E+ + S L++ +S ++
Sbjct: 449 ------AIPLVIKDPIEEIGSDISKLTEGKKFGQSQTLRSPIEIQSKQFGST-------- 494
Query: 570 CGRSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQLQHRNKWEIVFTDDEGD 629
R+ TKVQMQGV +GRAVDL+ L+GYDQLI ELE+LFDLKGQLQ RN+W+I FTD +G
Sbjct: 495 --RTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTRNQWKIAFTDSDGY 552
Query: 630 MMLVGDDPWPEFCNMVKRIFICSSQDVK 657
MLVGDDPWPEFC MVK+I I S ++VK
Sbjct: 553 EMLVGDDPWPEFCKMVKKILIYSKEEVK 580
>AT1G34170.1 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12444265-12446764 REVERSE LENGTH=505
Length = 505
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 173/363 (47%), Positives = 238/363 (65%), Gaps = 9/363 (2%)
Query: 24 LYEPLWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCRVV 83
+YE LW + AGPL +P+ G++V+YFPQGH+E +E ST EL+ P+ LP+K+ CRVV
Sbjct: 22 MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVV 81
Query: 84 NVHLMAEQETDEVYAQITLVPESNQDEPTSPDPCPAEPPKPTVHSFCKVLTASDTSTHGG 143
+ ++ TDEVYAQI+L+P++ + + +P V+ F K+LTASD S GG
Sbjct: 82 AIDRKVDKNTDEVYAQISLMPDTTE---VMTHNTTMDTRRPIVYFFSKILTASDVSLSGG 138
Query: 144 FSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTT--GWSTF 201
+ +++A EC P LDMSQ TQ LVAKDL G EW FKH+FRG P+RH+ T+ GWS F
Sbjct: 139 LIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVF 198
Query: 202 VTSKRLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVAT 261
T+KRL+ GD FV LRGENGELR G+RR GV+A+ +A T
Sbjct: 199 ATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKT 258
Query: 262 QTLFVVYYKPRTSQFIISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTIVGVE 321
+ +F V YKP +SQF+IS +K+++AMNN + +G R +M+FE D SE KR+ GTI+GV
Sbjct: 259 KCMFNVVYKPSSSQFVISYDKFVDAMNNNYIVGSRFRMQFEGKDFSE--KRYDGTIIGVN 316
Query: 322 DISPHWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPTVVKTKRPRQP 381
D+SPHW +S+WRSLKVQWDE + RP++VSPW+IE + S+ Q ++ K K Q
Sbjct: 317 DMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSSDIS--QSSLKKKKHWLQL 374
Query: 382 SEI 384
+EI
Sbjct: 375 NEI 377
>AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=935
Length = 935
Score = 335 bits (859), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 190/414 (45%), Positives = 259/414 (62%), Gaps = 26/414 (6%)
Query: 28 LWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIP-LLKLPTKILCRVVNVH 86
LW AGPLV +P VG RV YFPQGH EQ+ ASTN+E++ IP L +++C++ NV
Sbjct: 26 LWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLICQLHNVT 85
Query: 87 LMAEQETDEVYAQITLVPESNQDEPTSPDP-CPAE---PPKPTVHSFCKVLTASDTSTHG 142
+ A+ ETDEVYAQ+TL P + Q++ DP PAE P + + FCK LTASDTSTHG
Sbjct: 86 MHADVETDEVYAQMTLQPLNAQEQK---DPYLPAELGVPSRQPTNYFCKTLTASDTSTHG 142
Query: 143 GFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWSTFV 202
GFSV R+ A + P LD SQQ P QEL+A+DL EW+F+HIFRGQP+RHLLTTGWS FV
Sbjct: 143 GFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFV 202
Query: 203 TSKRLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVATQ 262
++KRLVAGD+ +F+ + +L +G+RR R HLG+LA A+HA AT
Sbjct: 203 SAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATN 262
Query: 263 TLFVVYYKPRT--SQFIISVNKYLEAM-NNKFSLGMRLKMRFEADDASETDKRFSGTIVG 319
+ F ++Y PR S+F+I + KY++A+ + + S+GMR +M FE +++S +R+ GTI G
Sbjct: 263 SRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSV--RRYMGTITG 320
Query: 320 VEDISP-HWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPTVVKTKRP 378
+ D+ P W NS WRS+KV WDE A R RVS WEIEP PS P ++ KRP
Sbjct: 321 ICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS--PFPLRLKRP 378
Query: 379 RQPSEIP--------DVDTTSAASAFWDAGMKHADMTQLGVLS-ESKRSDVSGM 423
P +P D+ + ++ WD G++ + +GV R D SG+
Sbjct: 379 WPPG-LPSFHGLKEDDMGMSMSSPLMWDRGLQSLNFQGMGVNPWMQPRLDTSGL 431
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 58/86 (67%), Gaps = 3/86 (3%)
Query: 576 KVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQLQH--RNKWEIVFTDDEGDMMLV 633
KV G + GR++D++ Y +L EL ++F L+GQL+ R+ W++VF D E D++L+
Sbjct: 800 KVYKSG-SFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLLL 858
Query: 634 GDDPWPEFCNMVKRIFICSSQDVKKM 659
GDDPWPEF + V I I S Q+V++M
Sbjct: 859 GDDPWPEFVSSVWCIKILSPQEVQQM 884
>AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=933
Length = 933
Score = 335 bits (858), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 190/414 (45%), Positives = 259/414 (62%), Gaps = 26/414 (6%)
Query: 28 LWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIP-LLKLPTKILCRVVNVH 86
LW AGPLV +P VG RV YFPQGH EQ+ ASTN+E++ IP L +++C++ NV
Sbjct: 24 LWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLICQLHNVT 83
Query: 87 LMAEQETDEVYAQITLVPESNQDEPTSPDP-CPAE---PPKPTVHSFCKVLTASDTSTHG 142
+ A+ ETDEVYAQ+TL P + Q++ DP PAE P + + FCK LTASDTSTHG
Sbjct: 84 MHADVETDEVYAQMTLQPLNAQEQK---DPYLPAELGVPSRQPTNYFCKTLTASDTSTHG 140
Query: 143 GFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWSTFV 202
GFSV R+ A + P LD SQQ P QEL+A+DL EW+F+HIFRGQP+RHLLTTGWS FV
Sbjct: 141 GFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFV 200
Query: 203 TSKRLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVATQ 262
++KRLVAGD+ +F+ + +L +G+RR R HLG+LA A+HA AT
Sbjct: 201 SAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATN 260
Query: 263 TLFVVYYKPRT--SQFIISVNKYLEAM-NNKFSLGMRLKMRFEADDASETDKRFSGTIVG 319
+ F ++Y PR S+F+I + KY++A+ + + S+GMR +M FE +++S +R+ GTI G
Sbjct: 261 SRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSV--RRYMGTITG 318
Query: 320 VEDISP-HWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPTVVKTKRP 378
+ D+ P W NS WRS+KV WDE A R RVS WEIEP PS P ++ KRP
Sbjct: 319 ICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS--PFPLRLKRP 376
Query: 379 RQPSEIP--------DVDTTSAASAFWDAGMKHADMTQLGVLS-ESKRSDVSGM 423
P +P D+ + ++ WD G++ + +GV R D SG+
Sbjct: 377 WPPG-LPSFHGLKEDDMGMSMSSPLMWDRGLQSLNFQGMGVNPWMQPRLDTSGL 429
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 58/86 (67%), Gaps = 3/86 (3%)
Query: 576 KVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQLQH--RNKWEIVFTDDEGDMMLV 633
KV G + GR++D++ Y +L EL ++F L+GQL+ R+ W++VF D E D++L+
Sbjct: 798 KVYKSG-SFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLLL 856
Query: 634 GDDPWPEFCNMVKRIFICSSQDVKKM 659
GDDPWPEF + V I I S Q+V++M
Sbjct: 857 GDDPWPEFVSSVWCIKILSPQEVQQM 882
>AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 |
chr5:14630151-14633916 FORWARD LENGTH=773
Length = 773
Score = 325 bits (832), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 175/367 (47%), Positives = 239/367 (65%), Gaps = 12/367 (3%)
Query: 28 LWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIP-LLKLPTKILCRVVNVH 86
LW AGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP LP +++C++ NV
Sbjct: 23 LWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQLHNVT 82
Query: 87 LMAEQETDEVYAQITLVPESNQDEPTSPDPCP-AEPPKPTVHSFCKVLTASDTSTHGGFS 145
+ A+ ETDEVYAQ+TL P + +++ + P P K + FCK LTASDTSTHGGFS
Sbjct: 83 MHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPSNYFCKTLTASDTSTHGGFS 142
Query: 146 VLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 205
V R+ A + P LD + Q P QEL+A+DL EW+F+HIFRGQP+RHLLTTGWS FV++K
Sbjct: 143 VPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAK 202
Query: 206 RLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVATQTLF 265
RLVAGD+ +F+R E +L +G+R R H+G+LA A+HA AT + F
Sbjct: 203 RLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHASATNSCF 262
Query: 266 VVYYKPRTSQ--FIISVNKYLEAM-NNKFSLGMRLKMRFEADDASETDKRFSGTIVGVED 322
V++ PR SQ F+I ++KY++A+ + + S+GMR +M FE +++S +R+ GTI G+ D
Sbjct: 263 TVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSV--RRYMGTITGISD 320
Query: 323 I-SPHWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPTVVKTKRPRQP 381
+ S W NS WRS+KV WDE A R RVS WEIEP PS+ P ++ KRP
Sbjct: 321 LDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFP--LRLKRPWHA 378
Query: 382 --SEIPD 386
S +PD
Sbjct: 379 GTSSLPD 385
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 47/69 (68%), Gaps = 3/69 (4%)
Query: 572 RSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQLQH--RNKWEIVFTDDEGD 629
++ KV G +VGR++D++ Y +L +EL ++F ++G L+ R+ W++VF D E D
Sbjct: 705 KNFVKVYKSG-SVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKEND 763
Query: 630 MMLVGDDPW 638
++L+GDDPW
Sbjct: 764 ILLLGDDPW 772
>AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 |
chr5:14630151-14634106 FORWARD LENGTH=811
Length = 811
Score = 325 bits (832), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 175/367 (47%), Positives = 239/367 (65%), Gaps = 12/367 (3%)
Query: 28 LWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIP-LLKLPTKILCRVVNVH 86
LW AGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP LP +++C++ NV
Sbjct: 23 LWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQLHNVT 82
Query: 87 LMAEQETDEVYAQITLVPESNQDEPTSPDPCP-AEPPKPTVHSFCKVLTASDTSTHGGFS 145
+ A+ ETDEVYAQ+TL P + +++ + P P K + FCK LTASDTSTHGGFS
Sbjct: 83 MHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPSNYFCKTLTASDTSTHGGFS 142
Query: 146 VLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 205
V R+ A + P LD + Q P QEL+A+DL EW+F+HIFRGQP+RHLLTTGWS FV++K
Sbjct: 143 VPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAK 202
Query: 206 RLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVATQTLF 265
RLVAGD+ +F+R E +L +G+R R H+G+LA A+HA AT + F
Sbjct: 203 RLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHASATNSCF 262
Query: 266 VVYYKPRTSQ--FIISVNKYLEAM-NNKFSLGMRLKMRFEADDASETDKRFSGTIVGVED 322
V++ PR SQ F+I ++KY++A+ + + S+GMR +M FE +++S +R+ GTI G+ D
Sbjct: 263 TVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSV--RRYMGTITGISD 320
Query: 323 I-SPHWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPTVVKTKRPRQP 381
+ S W NS WRS+KV WDE A R RVS WEIEP PS+ P ++ KRP
Sbjct: 321 LDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFP--LRLKRPWHA 378
Query: 382 --SEIPD 386
S +PD
Sbjct: 379 GTSSLPD 385
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 58/90 (64%), Gaps = 3/90 (3%)
Query: 572 RSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQLQH--RNKWEIVFTDDEGD 629
++ KV G +VGR++D++ Y +L +EL ++F ++G L+ R+ W++VF D E D
Sbjct: 705 KNFVKVYKSG-SVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKEND 763
Query: 630 MMLVGDDPWPEFCNMVKRIFICSSQDVKKM 659
++L+GDDPW F N V I I S +DV +M
Sbjct: 764 ILLLGDDPWESFVNNVWYIKILSPEDVHQM 793
>AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 |
chr5:24308558-24312187 REVERSE LENGTH=788
Length = 788
Score = 320 bits (820), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 168/372 (45%), Positives = 231/372 (62%), Gaps = 23/372 (6%)
Query: 24 LYEPLWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCRVV 83
+Y LW AGPL +P+ G V YFPQGH+EQ +A + IP L +I+CRVV
Sbjct: 62 IYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQ-DAMVSYSSPLEIPKFDLNPQIVCRVV 120
Query: 84 NVHLMAEQETDEVYAQITLVP-----------ESNQDEPTSPDPCPAEPPKPTVHSFCKV 132
NV L+A ++TDEVY Q+TL+P + ++ + + K T H FCK
Sbjct: 121 NVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKRTPHMFCKT 180
Query: 133 LTASDTSTHGGFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRH 192
LTASDTSTHGGFSV R+ A +C LD QQ P+QEL+AKDL G EW+F+HI+RGQPRRH
Sbjct: 181 LTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRH 240
Query: 193 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVL 252
LLTTGWS FV+ K LV+GD +FLR E GELR+G+RR AR +L
Sbjct: 241 LLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEKNSCS-NIL 299
Query: 253 ATASHAVATQTLFVVYYKPRT--SQFIISVNKYLEAMNNKFSLGMRLKMRFEADDASETD 310
+ ++AV+T+++F V+Y PR ++F+I KY+ ++ + +G R +MRFE DD+ E
Sbjct: 300 SLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSIRSPVCIGTRFRMRFEMDDSPE-- 357
Query: 311 KRFSGTIVGVEDISPH-WVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQ 369
+R +G + GV D+ P+ W NSKWR L V+WDE +RVSPWEI+P S S P +
Sbjct: 358 RRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDP---SVSLPHL- 413
Query: 370 PTVVKTKRPRQP 381
++ + RP++P
Sbjct: 414 -SIQSSPRPKRP 424
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 74/106 (69%), Gaps = 4/106 (3%)
Query: 572 RSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQLQHRNK-WEIVFTDDEGDM 630
R TKV QG VGRA+DL+ L+GYD L+ ELE+LF+++G L+ K W I++TD E DM
Sbjct: 665 RICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPEKGWRILYTDSENDM 724
Query: 631 MLVGDDPWPEFCNMVKRIFICSSQDVKKMSSGSKLPISSMEEGTVI 676
M+VGDDPW +FCN+V +I + + ++V+ + +K S +E+ ++
Sbjct: 725 MVVGDDPWHDFCNVVWKIHLYTKEEVENANDDNK---SCLEQAALM 767
>AT1G34170.2 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12444265-12446764 REVERSE LENGTH=479
Length = 479
Score = 318 bits (815), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 162/363 (44%), Positives = 218/363 (60%), Gaps = 35/363 (9%)
Query: 24 LYEPLWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCRVV 83
+YE LW + AGPL +P+ G++V+YFPQGH+E +E ST EL+ P+ LP+K+ CRVV
Sbjct: 22 MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVV 81
Query: 84 NVHLMAEQETDEVYAQITLVPESNQDEPTSPDPCPAEPPKPTVHSFCKVLTASDTSTHGG 143
+ ++ TDEVYAQI+L+P++ + + +P V+ F K+LTASD S GG
Sbjct: 82 AIDRKVDKNTDEVYAQISLMPDTTE---VMTHNTTMDTRRPIVYFFSKILTASDVSLSGG 138
Query: 144 FSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTT--GWSTF 201
+ +++A EC P LDMSQ TQ LVAKDL G EW FKH+FRG P+RH+ T+ GWS F
Sbjct: 139 LIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVF 198
Query: 202 VTSKRLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVAT 261
T+KRL+ GD FV LRGENGELR G+RR GV+A+ +A T
Sbjct: 199 ATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKT 258
Query: 262 QTLFVVYYKPRTSQFIISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTIVGVE 321
+ +F V YKPR M+FE D SE KR+ GTI+GV
Sbjct: 259 KCMFNVVYKPR--------------------------MQFEGKDFSE--KRYDGTIIGVN 290
Query: 322 DISPHWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPTVVKTKRPRQP 381
D+SPHW +S+WRSLKVQWDE + RP++VSPW+IE + S+ Q ++ K K Q
Sbjct: 291 DMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSSDIS--QSSLKKKKHWLQL 348
Query: 382 SEI 384
+EI
Sbjct: 349 NEI 351
>AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12443578-12446764 REVERSE LENGTH=546
Length = 546
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 162/363 (44%), Positives = 218/363 (60%), Gaps = 35/363 (9%)
Query: 24 LYEPLWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCRVV 83
+YE LW + AGPL +P+ G++V+YFPQGH+E +E ST EL+ P+ LP+K+ CRVV
Sbjct: 22 MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVV 81
Query: 84 NVHLMAEQETDEVYAQITLVPESNQDEPTSPDPCPAEPPKPTVHSFCKVLTASDTSTHGG 143
+ ++ TDEVYAQI+L+P++ + + +P V+ F K+LTASD S GG
Sbjct: 82 AIDRKVDKNTDEVYAQISLMPDTTE---VMTHNTTMDTRRPIVYFFSKILTASDVSLSGG 138
Query: 144 FSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTT--GWSTF 201
+ +++A EC P LDMSQ TQ LVAKDL G EW FKH+FRG P+RH+ T+ GWS F
Sbjct: 139 LIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVF 198
Query: 202 VTSKRLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVAT 261
T+KRL+ GD FV LRGENGELR G+RR GV+A+ +A T
Sbjct: 199 ATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKT 258
Query: 262 QTLFVVYYKPRTSQFIISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTIVGVE 321
+ +F V YKPR M+FE D SE KR+ GTI+GV
Sbjct: 259 KCMFNVVYKPR--------------------------MQFEGKDFSE--KRYDGTIIGVN 290
Query: 322 DISPHWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPTVVKTKRPRQP 381
D+SPHW +S+WRSLKVQWDE + RP++VSPW+IE + S+ Q ++ K K Q
Sbjct: 291 DMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSSDIS--QSSLKKKKHWLQL 348
Query: 382 SEI 384
+EI
Sbjct: 349 NEI 351
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 62/97 (63%), Positives = 77/97 (79%)
Query: 569 ICGRSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQLQHRNKWEIVFTDDEG 628
+ G TKV MQGVA+ RAVDL + GY+QLI +LE+LFDLK +L+ RN+WEIVFT++EG
Sbjct: 430 LFGVDLTKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRTRNQWEIVFTNNEG 489
Query: 629 DMMLVGDDPWPEFCNMVKRIFICSSQDVKKMSSGSKL 665
MLVGDDPWPEFCNM KRIFICS +++KKM +K
Sbjct: 490 AEMLVGDDPWPEFCNMAKRIFICSKEEIKKMKLKNKF 526
>AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 family
protein / auxin-responsive factor AUX/IAA-related |
chr2:14325444-14328613 REVERSE LENGTH=608
Length = 608
Score = 315 bits (807), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 166/381 (43%), Positives = 223/381 (58%), Gaps = 22/381 (5%)
Query: 28 LWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCRVVNVHL 87
LW AGPL+ +P+ G V YFPQGH+EQ + + LP + CR+++V L
Sbjct: 55 LWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAIYGLPPHVFCRILDVKL 107
Query: 88 MAEQETDEVYAQITLVPESNQ----------DEPTSPDPCPAEPPKPTVHSFCKVLTASD 137
AE TDEVYAQ++L+PES D + T H FCK LTASD
Sbjct: 108 HAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTASD 167
Query: 138 TSTHGGFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTG 197
TSTHGGFSV R+ A +C P LD SQ P+QEL+A+DL G EWRF+HI+RGQPRRHLLTTG
Sbjct: 168 TSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTTG 227
Query: 198 WSTFVTSKRLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASH 257
WS FV K+LV+GD +FLRG++G+LR+GVRR ++ + + +H
Sbjct: 228 WSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNNFSEVAH 287
Query: 258 AVATQTLFVVYYKPRT--SQFIISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSG 315
A++T ++F + Y P+ S FII K+L+ ++ F +GMR K R E++DASE +R G
Sbjct: 288 AISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDASE--RRSPG 345
Query: 316 TIVGVEDISP-HWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPTVVK 374
I G+ D+ P W SKWR L V+WD+ A RVSPWEIEP + +++ S T K
Sbjct: 346 IISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEPSGSISNSGSFVTTGPK 405
Query: 375 TKRPRQPSEIPDVDTTSAASA 395
R S PD+ + A
Sbjct: 406 RSRIGFSSGKPDIPVSEGIRA 426
>AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor B3
family protein / auxin-responsive factor AUX/IAA-related
| chr1:6887353-6891182 FORWARD LENGTH=902
Length = 902
Score = 313 bits (801), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 163/336 (48%), Positives = 220/336 (65%), Gaps = 8/336 (2%)
Query: 28 LWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIP-LLKLPTKILCRVVNVH 86
LW AGPLV +P+VG V+YF QGH EQ+ ST + ++P LP++++C+V NV
Sbjct: 55 LWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNVT 114
Query: 87 LMAEQETDEVYAQITLVP-ESNQDEPTSPDPCPAEPPKPTVHSFCKVLTASDTSTHGGFS 145
L A++++DE+YAQ++L P S +D PD K FCK LTASDTSTHGGFS
Sbjct: 115 LHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTEFFCKTLTASDTSTHGGFS 174
Query: 146 VLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 205
V R+ A + P LD S Q PTQELV +DL W F+HI+RGQP+RHLLTTGWS FV SK
Sbjct: 175 VPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSK 234
Query: 206 RLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVATQTLF 265
RL AGD+ +F+R E +L VGVRR R H+GVLA A+HA A +T F
Sbjct: 235 RLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTPF 294
Query: 266 VVYYKPRT--SQFIISVNKYLEAM-NNKFSLGMRLKMRFEADDASETDKRFSGTIVGVED 322
+++Y PR ++F+I + KY +A+ ++ S+GMR M FE +D+ + +R+ GTIVG+ D
Sbjct: 295 LIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGK--RRYMGTIVGISD 352
Query: 323 ISP-HWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIE 357
+ P W SKWR+L+V+WDEP +P RVSPW+IE
Sbjct: 353 LDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 388
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 63/97 (64%), Gaps = 4/97 (4%)
Query: 572 RSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQLQH--RNKWEIVFTDDEGD 629
R+ TKVQ G +VGR++D+ + Y++L +E +F L+G L H + W++V+ D E D
Sbjct: 793 RTYTKVQKTG-SVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESD 851
Query: 630 MMLVGDDPWPEFCNMVKRIFICSSQDVKKMS-SGSKL 665
++LVGDDPW EF V+ I I S +V++MS G KL
Sbjct: 852 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKL 888
>AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response factor
19 | chr1:6628395-6632779 REVERSE LENGTH=1086
Length = 1086
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/399 (44%), Positives = 236/399 (59%), Gaps = 20/399 (5%)
Query: 28 LWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCRVVNVHL 87
LW AGPLV +P VG V YFPQGH EQ+ AS ++ + LP+K++C + +V L
Sbjct: 24 LWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPNYPNLPSKLICLLHSVTL 83
Query: 88 MAEQETDEVYAQITLVPESNQDEPT--SPDPCPAEPPKPTVHSFCKVLTASDTSTHGGFS 145
A+ ETDEVYAQ+TL P + D + D +PT FCK LTASDTSTHGGFS
Sbjct: 84 HADTETDEVYAQMTLQPVNKYDREALLASDMGLKLNRQPT-EFFCKTLTASDTSTHGGFS 142
Query: 146 VLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 205
V R+ A + P LD S Q P QE+VAKDL W F+HI+RGQP+RHLLTTGWS FV++K
Sbjct: 143 VPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVFVSTK 202
Query: 206 RLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVATQTLF 265
RL AGD+ +F+R E +L +G+RR R H+G+LA A+HA A + F
Sbjct: 203 RLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGILAAAAHANANSSPF 262
Query: 266 VVYYKPRT--SQFIISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTIVGVEDI 323
+++ PR S+F++ + KY +A+ + SLGMR +M FE +D +R+ GT+ G+ D+
Sbjct: 263 TIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGV--RRYMGTVTGISDL 320
Query: 324 SP-HWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPTVVKTKRPRQPS 382
P W S+WR+L+V WDE A RP RVS WEIEP + P + K PRQP
Sbjct: 321 DPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVITPFYI--CPPPFFRPKYPRQPG 378
Query: 383 EIPDVDTTSAASAF-----W---DAGMKHADMTQLGVLS 413
+PD D +AF W D GMK A + LS
Sbjct: 379 -MPD-DELDMENAFKRAMPWMGEDFGMKDAQSSMFPGLS 415
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 66/91 (72%), Gaps = 3/91 (3%)
Query: 572 RSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQLQH--RNKWEIVFTDDEGD 629
R+ TKVQ +G +VGR++D+ GYD+L +L ++F ++GQL+ + W++V+TD E D
Sbjct: 958 RTYTKVQKRG-SVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHEND 1016
Query: 630 MMLVGDDPWPEFCNMVKRIFICSSQDVKKMS 660
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1017 ILLVGDDPWEEFVNCVQNIKILSSVEVQQMS 1047
>AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1164
Length = 1164
Score = 302 bits (773), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 158/338 (46%), Positives = 215/338 (63%), Gaps = 8/338 (2%)
Query: 28 LWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCRVVNVHL 87
LW AGPL+ +P G V YFPQGH EQ+ AS ++ + LP+K++C + NV L
Sbjct: 25 LWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICMLHNVTL 84
Query: 88 MAEQETDEVYAQITLVP--ESNQDEPTSPDPCPAEPPKPTVHSFCKVLTASDTSTHGGFS 145
A+ ETDEVYAQ+TL P + ++D + D +P FCK LTASDTSTHGGFS
Sbjct: 85 NADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPN-EFFCKTLTASDTSTHGGFS 143
Query: 146 VLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 205
V R+ A + PALD S Q P QELVAKD+ W F+HI+RGQP+RHLLTTGWS FV++K
Sbjct: 144 VPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTK 203
Query: 206 RLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVATQTLF 265
RL AGD+ +F+R +L +G+RR R H+GVLA A+HA A + F
Sbjct: 204 RLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANANNSPF 263
Query: 266 VVYYKPRT--SQFIISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTIVGVEDI 323
++Y PR ++F++ + KY +AM + SLGMR +M FE ++ +R+ GT+ G+ D+
Sbjct: 264 TIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGV--RRYMGTVTGISDL 321
Query: 324 SP-HWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFV 360
P W NS+WR+L++ WDE AA RP RVS W+IEP +
Sbjct: 322 DPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL 359
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 66/91 (72%), Gaps = 3/91 (3%)
Query: 572 RSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQLQ--HRNKWEIVFTDDEGD 629
R+ TKVQ +G +VGR++D+N GYD+L +L ++F ++GQL+ + W++V+ D E D
Sbjct: 1037 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1095
Query: 630 MMLVGDDPWPEFCNMVKRIFICSSQDVKKMS 660
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1096 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1126
>AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1165
Length = 1165
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 158/339 (46%), Positives = 215/339 (63%), Gaps = 9/339 (2%)
Query: 28 LWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCRVVNVHL 87
LW AGPL+ +P G V YFPQGH EQ+ AS ++ + LP+K++C + NV L
Sbjct: 25 LWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICMLHNVTL 84
Query: 88 MAEQETDEVYAQITLVP--ESNQDEPTSPDPCPAEPPKPTVHSFCKVLTASDTSTHGGFS 145
A+ ETDEVYAQ+TL P + ++D + D +P FCK LTASDTSTHGGFS
Sbjct: 85 NADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPN-EFFCKTLTASDTSTHGGFS 143
Query: 146 VLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 205
V R+ A + PALD S Q P QELVAKD+ W F+HI+RGQP+RHLLTTGWS FV++K
Sbjct: 144 VPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTK 203
Query: 206 RLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVATQTLF 265
RL AGD+ +F+R +L +G+RR R H+GVLA A+HA A + F
Sbjct: 204 RLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANANNSPF 263
Query: 266 VVYYKPR---TSQFIISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTIVGVED 322
++Y PR ++F++ + KY +AM + SLGMR +M FE ++ +R+ GT+ G+ D
Sbjct: 264 TIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGV--RRYMGTVTGISD 321
Query: 323 ISP-HWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFV 360
+ P W NS+WR+L++ WDE AA RP RVS W+IEP +
Sbjct: 322 LDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL 360
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 66/91 (72%), Gaps = 3/91 (3%)
Query: 572 RSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQLQ--HRNKWEIVFTDDEGD 629
R+ TKVQ +G +VGR++D+N GYD+L +L ++F ++GQL+ + W++V+ D E D
Sbjct: 1038 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1096
Query: 630 MMLVGDDPWPEFCNMVKRIFICSSQDVKKMS 660
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1097 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1127
>AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23,
IAA25 | Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1150
Length = 1150
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 158/339 (46%), Positives = 215/339 (63%), Gaps = 9/339 (2%)
Query: 28 LWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCRVVNVHL 87
LW AGPL+ +P G V YFPQGH EQ+ AS ++ + LP+K++C + NV L
Sbjct: 25 LWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICMLHNVTL 84
Query: 88 MAEQETDEVYAQITLVP--ESNQDEPTSPDPCPAEPPKPTVHSFCKVLTASDTSTHGGFS 145
A+ ETDEVYAQ+TL P + ++D + D +P FCK LTASDTSTHGGFS
Sbjct: 85 NADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPN-EFFCKTLTASDTSTHGGFS 143
Query: 146 VLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 205
V R+ A + PALD S Q P QELVAKD+ W F+HI+RGQP+RHLLTTGWS FV++K
Sbjct: 144 VPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTK 203
Query: 206 RLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVATQTLF 265
RL AGD+ +F+R +L +G+RR R H+GVLA A+HA A + F
Sbjct: 204 RLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANANNSPF 263
Query: 266 VVYYKPR---TSQFIISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTIVGVED 322
++Y PR ++F++ + KY +AM + SLGMR +M FE ++ +R+ GT+ G+ D
Sbjct: 264 TIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGV--RRYMGTVTGISD 321
Query: 323 ISP-HWVNSKWRSLKVQWDEPAAVTRPDRVSPWEIEPFV 360
+ P W NS+WR+L++ WDE AA RP RVS W+IEP +
Sbjct: 322 LDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL 360
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 66/91 (72%), Gaps = 3/91 (3%)
Query: 572 RSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQLQ--HRNKWEIVFTDDEGD 629
R+ TKVQ +G +VGR++D+N GYD+L +L ++F ++GQL+ + W++V+ D E D
Sbjct: 1038 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1096
Query: 630 MMLVGDDPWPEFCNMVKRIFICSSQDVKKMS 660
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1097 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1127
>AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 |
chr2:12114331-12116665 FORWARD LENGTH=693
Length = 693
Score = 239 bits (610), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 156/409 (38%), Positives = 196/409 (47%), Gaps = 61/409 (14%)
Query: 28 LWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCRVVNVHL 87
LW AG +V +P + VFYF QGH E A + R+P L ILCRVV+V
Sbjct: 11 LWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPPDFHA-PRVPPL-----ILCRVVSVKF 64
Query: 88 MAEQETDEVYAQITLVPESNQD-----------EPTSPDPCPAEPPKPTVHSFCKVLTAS 136
+A+ ETDEV+A+ITL+P D P S D KP SF K LT S
Sbjct: 65 LADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKPA--SFAKTLTQS 122
Query: 137 DTSTHGGFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTT 196
D + GGFSV R A P LD S + P Q ++AKD+ G W+F+HI+RG PRRHLLTT
Sbjct: 123 DANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTT 182
Query: 197 GWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLGVLATAS 256
GWSTFV K+L+AGD+ VFLR E+G+L VG+RR R G L
Sbjct: 183 GWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSDNPYPGFSGFLRDDE 242
Query: 257 HAVATQTL------------------------------------FVVYYKPRTS--QFII 278
T L F V Y PR S +F +
Sbjct: 243 STTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAEAVARAACGQAFEVVYYPRASTPEFCV 302
Query: 279 SVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTIVGVEDISP-HWVNSKWRSLKV 337
AM ++ GMR KM FE +D+S F GT+ V+ P W NS WR L+V
Sbjct: 303 KAADVRSAMRIRWCSGMRFKMAFETEDSSRI-SWFMGTVSAVQVADPIRWPNSPWRLLQV 361
Query: 338 QWDEPAAVTRPDRVSPWEIEPFVASASTPSVQPTVVKTK-RPRQPSEIP 385
WDEP + RVSPW +E V++ T + P + K R QP E P
Sbjct: 362 AWDEPDLLQNVKRVSPWLVE-LVSNMPTIHLSPFSPRKKIRIPQPFEFP 409
>AT1G43950.1 | Symbols: ARF23 | auxin response factor 23 |
chr1:16672582-16673952 REVERSE LENGTH=222
Length = 222
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 146/206 (70%), Gaps = 8/206 (3%)
Query: 24 LYEPLWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCRVV 83
+YE LWKL AGPL D+P++G++V+YFPQGH+E +EAST +ELN+ P LP+K+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNCDLPSKLQCRVI 83
Query: 84 NVHLMAEQETDEVYAQITLVPESNQDE-PTSPDPCPAEPPKPTVHSFCKVLTASDTSTHG 142
+HL E +DE Y +ITL+P++ Q PT + +P V+SF KVLTASDTS G
Sbjct: 84 AIHLKVENNSDETYVEITLMPDTTQVVIPTENE----NQFRPIVNSFTKVLTASDTSAQG 139
Query: 143 GFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWSTFV 202
FSV KHA ECLP LDMSQ P QEL+A DL G +WRFKH +R PR TTGW+ F
Sbjct: 140 EFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR-VPRGD--TTGWNAFT 196
Query: 203 TSKRLVAGDTFVFLRGENGELRVGVR 228
TSK+LV GD VF RGE GELRVG+R
Sbjct: 197 TSKKLVVGDVIVFARGETGELRVGIR 222
>AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 |
chr4:14703369-14705564 REVERSE LENGTH=670
Length = 670
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 143/398 (35%), Positives = 191/398 (47%), Gaps = 52/398 (13%)
Query: 28 LWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCRVVNVHL 87
LW AG +V +P + +VFYFPQGH E + L +P +LCRV+ +
Sbjct: 20 LWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVD------FGNLPIPPMVLCRVLAIKY 73
Query: 88 MAEQETDEVYAQITLVPESN-----QDEPTSPDPCPAEPPKPTVHSFCKVLTASDTSTHG 142
MA+ E+DEV+A++ L+P + + D E SF K LT SD + G
Sbjct: 74 MADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSFAKTLTQSDANNGG 133
Query: 143 GFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQPRRHLLTTGWSTFV 202
GFSV R A P LD + + P Q ++AKD+ G W+F+HI+RG PRRHLLTTGWS FV
Sbjct: 134 GFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRHLLTTGWSNFV 193
Query: 203 TSKRLVAGDTFVFLRGENGELRVGVRRLARXXXXXXXXXXXXXXXHLG------------ 250
K+LVAGD+ VF+R ENG+L VG+RR R G
Sbjct: 194 NQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPIGGSCGYSSLLREDE 253
Query: 251 ----------------------VLATASHAVATQTLFVVYYKPR--TSQFIISVNKYLEA 286
V+ A+ A++ + VVYY PR TS+F + A
Sbjct: 254 SNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYY-PRASTSEFCVKALDARAA 312
Query: 287 MNNKFSLGMRLKMRFEADDASETDKRFSGTIVGVEDISP-HWVNSKWRSLKVQWDEPAAV 345
M + GMR KM FE +D+S F GT+ V P W NS WR L+V WDEP +
Sbjct: 313 MRIPWCSGMRFKMAFETEDSSRI-SWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLL 371
Query: 346 TRPDRVSPWEIEPFVASASTP--SVQPTVVKTKRPRQP 381
RV+PW +E P S P K + P+ P
Sbjct: 372 QNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQHP 409
>AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 |
chr1:29272405-29275193 FORWARD LENGTH=585
Length = 585
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 174/382 (45%), Gaps = 76/382 (19%)
Query: 28 LWKLSAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLK-LPTK---ILCRVV 83
+W+ AG V +P + RV+YFPQGH+E PLL LP+ + C +
Sbjct: 20 IWRACAGASVQIPVLHSRVYYFPQGHVEHC-----------CPLLSTLPSSTSPVPCIIT 68
Query: 84 NVHLMAEQETDEVYAQITLVPESNQDEPTSPDPCPAEPPKPTVHS--------------- 128
++ L+A+ TDEV+A + L P + Q PT +S
Sbjct: 69 SIQLLADPVTDEVFAHLILQPMTQQQF------------TPTNYSRFGRFDGDVDDNNKV 116
Query: 129 --FCKVLTASDTSTHGGFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFR 186
F K+LT SD + GGFSV R A P L+ P Q+L D+ G W F+HI+R
Sbjct: 117 TTFAKILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYR 176
Query: 187 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRR----------------- 229
G PRRHLLTTGWS FV SK+L+AGD+ VF+R E+ +GVRR
Sbjct: 177 GTPRRHLLTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDE 236
Query: 230 ---------LARXXXXXXXXXXXXXXXHLGVLATASHAV--ATQTL-FVVYYKPRT--SQ 275
+A+ + A+ A+Q L F V + P S+
Sbjct: 237 YNGYYSQSSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSE 296
Query: 276 FIISVNKYLEAMNNKFSLGMRLKMRFEADDASETDKRFSGTIVGVEDISPHWVNSKWRSL 335
F++ +M+ ++ G R+KM E +D+S F G + + W S W+ L
Sbjct: 297 FVVRAEDVESSMSMYWTPGTRVKMAMETEDSSRI-TWFQGIVSSTYQETGPWRGSPWKQL 355
Query: 336 KVQWDEPAAVTRPDRVSPWEIE 357
++ WDEP + RV+PW++E
Sbjct: 356 QITWDEPEILQNVKRVNPWQVE 377
>AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid inducible
28 | chr5:9033480-9034554 FORWARD LENGTH=175
Length = 175
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%)
Query: 576 KVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQLQHRNKWEIVFTDDEGDMMLVGD 635
K+ M+GV +GR V+L+ + Y QL ++QLF K ++ +V+ D EGD +LVGD
Sbjct: 84 KINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVGD 143
Query: 636 DPWPEFCNMVKRIFICSSQDVKKMS 660
PW F + VKR+ + + +S
Sbjct: 144 VPWEMFVSTVKRLHVLKTSHAFSLS 168
>AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=247
Length = 247
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 576 KVQMQGVAVGRAVDLNTLDGYDQLIDELEQLF--------DLKGQ-------LQHRNKWE 620
KV M GVA+GR VDLN Y+ L LE +F L Q L +++
Sbjct: 133 KVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFV 192
Query: 621 IVFTDDEGDMMLVGDDPWPEFCNMVKRIFICSSQDVKKMSSGSKLP 666
+ + D EGD MLVGD PW F N VKR+ + + + +++ ++ P
Sbjct: 193 LTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEP 238
>AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 576 KVQMQGVAVGRAVDLNTLDGYDQLIDELEQLF--------DLKGQ-------LQHRNKWE 620
KV M GVA+GR VDLN Y+ L LE +F L Q L +++
Sbjct: 132 KVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFV 191
Query: 621 IVFTDDEGDMMLVGDDPWPEFCNMVKRIFICSSQDVKKMSSGSKLP 666
+ + D EGD MLVGD PW F N VKR+ + + + +++ ++ P
Sbjct: 192 LTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEP 237
>AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 576 KVQMQGVAVGRAVDLNTLDGYDQLIDELEQLF--------DLKGQ-------LQHRNKWE 620
KV M GVA+GR VDLN Y+ L LE +F L Q L +++
Sbjct: 132 KVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFV 191
Query: 621 IVFTDDEGDMMLVGDDPWPEFCNMVKRIFICSSQDVKKMSSGSKLP 666
+ + D EGD MLVGD PW F N VKR+ + + + +++ ++ P
Sbjct: 192 LTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEP 237
>AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated protein
1 | chr3:5612801-5614208 REVERSE LENGTH=269
Length = 269
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 18/99 (18%)
Query: 576 KVQMQGVAVGRAVDLNTLDGYDQLIDELEQLF-----------DLKGQ-------LQHRN 617
K+ M GV +GR VDLN + Y+QL +++LF D +G+ L +
Sbjct: 155 KINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQGEEKPIIGLLDGKG 214
Query: 618 KWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFICSSQDV 656
++ + + D+EGD MLVGD PW F + VKR+ + S ++
Sbjct: 215 EFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEI 253
>AT4G01500.1 | Symbols: NGA4 | AP2/B3-like transcriptional factor
family protein | chr4:639791-640792 FORWARD LENGTH=333
Length = 333
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 127 HSFCKVLTASDTSTHGGFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFR 186
H F KVLT SD + ++HA P D T L +D G WRF++ +
Sbjct: 34 HMFDKVLTPSDVGKLNRLVIPKQHAENFFPLEDNQNGT---VLDFQDKNGKMWRFRYSYW 90
Query: 187 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 218
+ +++T GWS FV K+L AGDT F RG
Sbjct: 91 NSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRG 122
>AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31 |
chr3:6020281-6021040 REVERSE LENGTH=158
Length = 158
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 576 KVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQLQHRNKWEIVFT--DDEGDMMLV 633
KV M+GV +GR +DL GY+ L++ L +FD +R++ V T D +GD M+V
Sbjct: 76 KVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMMV 135
Query: 634 GDDPWPEFCNMVKRIFI 650
GD PW F V+R+ I
Sbjct: 136 GDIPWDMFLETVRRLKI 152
>AT1G01030.1 | Symbols: NGA3 | AP2/B3-like transcriptional factor
family protein | chr1:11864-12940 REVERSE LENGTH=358
Length = 358
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 121 PPKPTVHSFCKVLTASDTSTHGGFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWR 180
PP H F KV+T SD + ++HA P LD S L +D G WR
Sbjct: 48 PPPEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWR 106
Query: 181 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 218
F++ + + +++T GWS FV K+L AGD F RG
Sbjct: 107 FRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 144
>AT1G51950.1 | Symbols: IAA18 | indole-3-acetic acid inducible 18 |
chr1:19305670-19307130 FORWARD LENGTH=267
Length = 267
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 18/99 (18%)
Query: 576 KVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFD------------------LKGQLQHRN 617
K+ M GV +GR VDL+ + Y+QL +++LF + G L
Sbjct: 153 KINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRDFPSSIEDEKPITGLLDGNG 212
Query: 618 KWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFICSSQDV 656
++ + + D+EGD MLVGD PW F + VKR+ + + ++
Sbjct: 213 EYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSEI 251
>AT2G46990.1 | Symbols: IAA20 | indole-3-acetic acid inducible 20 |
chr2:19307861-19308869 FORWARD LENGTH=175
Length = 175
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 571 GRSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDL------KGQLQHRNKWEIVFT 624
G KV M+GV +GR +DL +L+GY LI L+ +F+ + + + + +
Sbjct: 83 GSFYVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYA 142
Query: 625 DDEGDMMLVGDDPWPEFCNMVKRIFI 650
D EGD M+VGD PW F + V+R+ I
Sbjct: 143 DKEGDWMMVGDVPWEMFLSTVRRLKI 168
>AT3G62100.1 | Symbols: IAA30 | indole-3-acetic acid inducible 30 |
chr3:22995835-22996593 FORWARD LENGTH=172
Length = 172
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 14/90 (15%)
Query: 571 GRSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLF----------DLKGQLQHRNKWE 620
G KV M+GV +GR +DL +L+GY LI L+ +F D+ + H
Sbjct: 81 GSFYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEDMCSEKSH----V 136
Query: 621 IVFTDDEGDMMLVGDDPWPEFCNMVKRIFI 650
+ + D EGD M+VGD PW F + V+R+ I
Sbjct: 137 LTYADKEGDWMMVGDVPWEMFLSSVRRLKI 166
>AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional
regulator family protein | chr1:1240582-1241810 FORWARD
LENGTH=239
Length = 239
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
Query: 569 ICGRSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLF-DLKGQ-----------LQHR 616
+ G KV M GV +GR VD+ Y+ L LE++F + G L
Sbjct: 121 VQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGS 180
Query: 617 NKWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFICSSQDVKKMS 660
+ + + + D EGD MLVGD PW F N VKR+ I + + ++
Sbjct: 181 SDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLA 224
>AT2G46870.1 | Symbols: NGA1 | AP2/B3-like transcriptional factor
family protein | chr2:19261313-19262245 FORWARD
LENGTH=310
Length = 310
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 127 HSFCKVLTASDTSTHGGFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFR 186
H F KV+T SD + ++HA P LD S L +DL G WRF++ +
Sbjct: 33 HMFDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTGKSWRFRYSYW 91
Query: 187 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR-----GENGELRVGVRR 229
+ +++T GWS FV K+L AGD F R G + L + RR
Sbjct: 92 NSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRR 139
>AT1G80390.1 | Symbols: IAA15 | indole-3-acetic acid inducible 15 |
chr1:30221780-30222702 REVERSE LENGTH=179
Length = 179
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Query: 572 RSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKG--------QLQHRNKWEIVF 623
R KV + G A R VDL D Y QL LE +F +G +L+ + ++ +
Sbjct: 86 RKYVKVALDGAAYLRKVDLGMYDCYGQLFTALENMF--QGIITICRVTELERKGEFVATY 143
Query: 624 TDDEGDMMLVGDDPWPEFCNMVKRIFICSSQD 655
D +GD+MLVGD PW F KR+ + + D
Sbjct: 144 EDKDGDLMLVGDVPWMMFVESCKRMRLMKTGD 175
>AT4G28640.3 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143677 FORWARD LENGTH=250
Length = 250
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 20/99 (20%)
Query: 576 KVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQLQHR------------------- 616
KV M G+ +GR +DLN Y+ L + LE++F LK +L R
Sbjct: 140 KVTMDGIPIGRKIDLNAHKCYESLSNTLEEMF-LKPKLGSRTLETDGHMETPVKILPDGS 198
Query: 617 NKWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFICSSQD 655
+ + + D EGD MLVGD PW F V+R+ I + +
Sbjct: 199 SGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSE 237
>AT4G28640.1 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143755 FORWARD LENGTH=246
Length = 246
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 20/99 (20%)
Query: 576 KVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQLQHR------------------- 616
KV M G+ +GR +DLN Y+ L + LE++F LK +L R
Sbjct: 140 KVTMDGIPIGRKIDLNAHKCYESLSNTLEEMF-LKPKLGSRTLETDGHMETPVKILPDGS 198
Query: 617 NKWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFICSSQD 655
+ + + D EGD MLVGD PW F V+R+ I + +
Sbjct: 199 SGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSE 237
>AT1G04100.1 | Symbols: IAA10 | indoleacetic acid-induced protein 10
| chr1:1059809-1061026 FORWARD LENGTH=261
Length = 261
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 21/96 (21%)
Query: 576 KVQMQGVAVGRAVDLNTLDGYDQLIDELEQLF----------DLKGQ-----------LQ 614
KV M GV +GR VDLN LD Y L L+ +F + +G L
Sbjct: 155 KVTMDGVIIGRKVDLNALDSYAALEKTLDLMFFQIPSPVTRSNTQGYKTIKETCTSKLLD 214
Query: 615 HRNKWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFI 650
+++ I + D +GD MLVGD PW F V R+ I
Sbjct: 215 GSSEYIITYQDKDGDWMLVGDVPWQMFLGSVTRLRI 250
>AT4G28640.2 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143928 FORWARD LENGTH=302
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 20/100 (20%)
Query: 575 TKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQLQHR------------------ 616
KV M G+ +GR +DLN Y+ L + LE++F LK +L R
Sbjct: 139 VKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMF-LKPKLGSRTLETDGHMETPVKILPDG 197
Query: 617 -NKWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFICSSQD 655
+ + + D EGD MLVGD PW F V+R+ I + +
Sbjct: 198 SSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSE 237
>AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional
regulator family protein | chr5:17550465-17551206
FORWARD LENGTH=186
Length = 186
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 576 KVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLK-GQLQHRNKWEI-----VFTDDEGD 629
KV M G R +DL Y +L+ LE +F G+ R ++ + D +GD
Sbjct: 92 KVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSVGEYFEREGYKGSDFVPTYEDKDGD 151
Query: 630 MMLVGDDPWPEFCNMVKRIFICSSQDVKKMSSGS 663
MLVGD PW F + KR+ I +VK + G
Sbjct: 152 WMLVGDVPWEMFVSSCKRLRIMKGSEVKGLGCGG 185
>AT3G23030.1 | Symbols: IAA2 | indole-3-acetic acid inducible 2 |
chr3:8181069-8181685 REVERSE LENGTH=174
Length = 174
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 573 SRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFD-LKGQLQHRNKWE-----IVFTDD 626
S KV M G R +DL T Y +L+ LE +F + G+ R ++ + D
Sbjct: 78 SYVKVSMDGAPYLRKIDLKTYKNYPELLKALENMFKVMIGEYCEREGYKGSGFVPTYEDK 137
Query: 627 EGDMMLVGDDPWPEFCNMVKRIFICSSQDVKKMSS 661
+GD MLVGD PW F + KR+ I D + S
Sbjct: 138 DGDWMLVGDVPWDMFSSSCKRLRIMKGSDAPALDS 172
>AT3G15540.1 | Symbols: IAA19, MSG2 | indole-3-acetic acid inducible
19 | chr3:5264100-5265378 FORWARD LENGTH=197
Length = 197
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 571 GRSRTKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKG---QLQHRNKWEIV--FTD 625
G KV M GV R +DL + GYD L L++LF +G L+ + E V + D
Sbjct: 95 GLGYVKVSMDGVPYLRKMDLGSSQGYDDLAFALDKLFGFRGIGVALKDGDNCEYVTIYED 154
Query: 626 DEGDMMLVGDDPWPEFCNMVKRIFICSSQD 655
+GD ML GD PW F KR+ I D
Sbjct: 155 KDGDWMLAGDVPWGMFLESCKRLRIMKRSD 184
>AT3G61970.1 | Symbols: NGA2 | AP2/B3-like transcriptional factor
family protein | chr3:22951829-22952728 FORWARD
LENGTH=299
Length = 299
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 127 HSFCKVLTASDTSTHGGFSVLRKHATECLPALDMSQQTPTQE---LVAKDLLGYEWRFKH 183
H F KV+T SD + ++HA P LD S + + L +D G WRF++
Sbjct: 21 HMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTNDSNKGLLLNFEDRSGNSWRFRY 79
Query: 184 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR 217
+ + +++T GWS FV K+L AGD F R
Sbjct: 80 SYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQR 113
>AT1G04240.1 | Symbols: SHY2, IAA3 | AUX/IAA transcriptional
regulator family protein | chr1:1128564-1129319 REVERSE
LENGTH=189
Length = 189
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 576 KVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLK-GQLQHRNKWE-----IVFTDDEGD 629
KV M G R +DL+ GY +L+ LE +F G+ R+ ++ + D +GD
Sbjct: 96 KVSMDGAPYLRKIDLSCYKGYSELLKALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGD 155
Query: 630 MMLVGDDPWPEFCNMVKRIFICSSQDVKKMSSG 662
ML+GD PW F KR+ I + K + G
Sbjct: 156 WMLIGDVPWEMFICTCKRLRIMKGSEAKGLGCG 188
>AT1G13260.1 | Symbols: RAV1, EDF4 | related to ABI3/VP1 1 |
chr1:4542386-4543420 FORWARD LENGTH=344
Length = 344
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 129 FCKVLTASDTSTHGGFSVLRKHATECLPALDMSQQTPTQELVAKDLLGYEWRFKHIFRGQ 188
F K +T SD + + HA + P + L +D+ G WRF++ +
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWNS 247
Query: 189 PRRHLLTTGWSTFVTSKRLVAGDTFVFLR--GENGELRVG 226
+ ++LT GWS FV K L AGD F R G++ +L +G
Sbjct: 248 SQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIG 287
>AT1G04250.1 | Symbols: AXR3, IAA17 | AUX/IAA transcriptional
regulator family protein | chr1:1136382-1138340 FORWARD
LENGTH=229
Length = 229
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 20/102 (19%)
Query: 575 TKVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKGQLQHR------------------ 616
KV M G R +DL YD+L + L +F +H
Sbjct: 113 VKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLV 172
Query: 617 NKWEIV--FTDDEGDMMLVGDDPWPEFCNMVKRIFICSSQDV 656
N W+ V + D +GD MLVGD PWP F + KR+ + D
Sbjct: 173 NSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDA 214
>AT2G36080.1 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr2:15148612-15151411 REVERSE LENGTH=244
Length = 244
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 129 FCKVLTASDTSTHGGFSVLRKHATECLPALDMSQQTPTQELVA--KDLLGYEWRFKHIFR 186
F K LT SD + ++HA P + + L+ +D G WRF++ +
Sbjct: 38 FEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSYW 97
Query: 187 GQPRRHLLTTGWSTFVTSKRLVAGDTFVF--LRGENGELRVGVRR 229
+ ++LT GWS +V K L AGD +F R + G +G RR
Sbjct: 98 NSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142
>AT2G36080.2 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr2:15150890-15151411 REVERSE LENGTH=173
Length = 173
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 129 FCKVLTASDTSTHGGFSVLRKHATECLPALDMSQQTPTQELVA--KDLLGYEWRFKHIFR 186
F K LT SD + ++HA P + + L+ +D G WRF++ +
Sbjct: 38 FEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSYW 97
Query: 187 GQPRRHLLTTGWSTFVTSKRLVAGDTFVF--LRGENGELRVGVRR 229
+ ++LT GWS +V K L AGD +F R + G +G RR
Sbjct: 98 NSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142
>AT1G52830.1 | Symbols: IAA6, SHY1 | indole-3-acetic acid 6 |
chr1:19672670-19673559 REVERSE LENGTH=189
Length = 189
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 576 KVQMQGVAVGRAVDLNTLDGYDQLIDELEQLFDLKG----QLQHRNKWEIVFTDDEGDMM 631
KV M GV R +DL + + Y L+ LE LF G + + ++ I++ D + D M
Sbjct: 97 KVSMDGVPYMRKIDLGSSNSYINLVTVLENLFGCLGIGVAKEGKKCEYIIIYEDKDRDWM 156
Query: 632 LVGDDPWPEFCNMVKRIFICSSQD 655
LVGD PW F KR+ I D
Sbjct: 157 LVGDVPWQMFKESCKRLRIVKRSD 180