Miyakogusa Predicted Gene
- Lj0g3v0250239.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0250239.1 tr|B9N9A7|B9N9A7_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_586590 PE=4
SV=1,84.85,0,ATP-DEPENDENT RNA HELICASE,NULL;
DEAH_ATP_HELICASE,DNA/RNA helicase, ATP-dependent, DEAH-box type,
c,CUFF.16378.1
(1217 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G26560.1 | Symbols: | ATP-dependent RNA helicase, putative |... 1729 0.0
AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein | chr1... 779 0.0
AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family prote... 778 0.0
AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protei... 761 0.0
AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein | c... 741 0.0
AT2G47250.1 | Symbols: | RNA helicase family protein | chr2:193... 690 0.0
AT3G62310.1 | Symbols: | RNA helicase family protein | chr3:230... 689 0.0
AT4G18465.1 | Symbols: | RNA helicase family protein | chr4:101... 596 e-170
AT1G26370.1 | Symbols: | RNA helicase family protein | chr1:912... 577 e-164
AT1G27900.1 | Symbols: | RNA helicase family protein | chr1:971... 539 e-153
AT4G16680.1 | Symbols: | P-loop containing nucleoside triphosph... 517 e-146
AT5G10370.1 | Symbols: | helicase domain-containing protein / I... 390 e-108
AT4G01020.1 | Symbols: | helicase domain-containing protein / I... 378 e-104
AT5G14900.1 | Symbols: | helicase associated (HA2) domain-conta... 224 2e-58
AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protei... 211 3e-54
AT2G35920.1 | Symbols: | RNA helicase family protein | chr2:150... 187 5e-47
AT1G48650.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 180 4e-45
AT1G48650.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 180 5e-45
AT1G58060.1 | Symbols: | RNA helicase family protein | chr1:214... 178 2e-44
AT2G01130.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 178 2e-44
AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissu... 176 7e-44
AT5G04895.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 173 8e-43
AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase | chr1:204... 167 3e-41
AT1G58050.1 | Symbols: | RNA helicase family protein | chr1:214... 159 1e-38
AT2G47680.1 | Symbols: | zinc finger (CCCH type) helicase famil... 141 3e-33
>AT3G26560.1 | Symbols: | ATP-dependent RNA helicase, putative |
chr3:9750122-9753719 REVERSE LENGTH=1168
Length = 1168
Score = 1729 bits (4478), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 831/967 (85%), Positives = 884/967 (91%), Gaps = 3/967 (0%)
Query: 253 DSRHGSGEPELYMVYKGRVSRVMDTGCFVQLDDFRGKEGLVHVSQIATRRITNAKDVIKR 312
+ + G+ EPELY VYKGRV+RVMD GCFVQ D FRGKEGLVHVSQ+ATRR+ AK+ +KR
Sbjct: 203 EDKGGANEPELYQVYKGRVTRVMDAGCFVQFDKFRGKEGLVHVSQMATRRVDKAKEFVKR 262
Query: 313 DQEVYVKVISVSGNKLSLAMRDVDQHTGKDLLPLKK-SSEDDAPRMNPQ-GLRDGPVSRT 370
D EVYVKVIS+S +K SL+MRDVDQ+TG+DL+PL+K S EDD+ R NP +DG V++T
Sbjct: 263 DMEVYVKVISISSDKYSLSMRDVDQNTGRDLIPLRKPSDEDDSSRSNPSYRTKDGQVTKT 322
Query: 371 GLSGIRIVEEDSVGGSSRRPLKRMSSPEIWEAKQLIASGVMSVSEYPTYDEEGDGLLYQX 430
G+SGIRIVEE+ V SRRPLK+MSSPE WEAKQLIASGV+ V E+P YDE+GDG+LYQ
Sbjct: 323 GISGIRIVEENDVA-PSRRPLKKMSSPERWEAKQLIASGVLRVDEFPMYDEDGDGMLYQE 381
Query: 431 XXXXXXXXXXXXXXXPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKXXXXXX 490
PAFLQGQ+RYS+DMSPVKIFKNPEGSL RAAALQSAL K
Sbjct: 382 EGAEEELEIEMNEDEPAFLQGQTRYSVDMSPVKIFKNPEGSLSRAAALQSALTKERREMR 441
Query: 491 XXXXXTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKTITFG 550
TMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDA+GKT TFG
Sbjct: 442 EQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKTPTFG 501
Query: 551 QRSKLSIQEQRQSLPIYKLKKELIQAVHDNQLLVVIGETGSGKTTQVTQYLAEAGYTTRG 610
QRSKLSIQEQR+SLPIYKLKKELIQAVHDNQ+LVVIGETGSGKTTQVTQYLAEAGYTT+G
Sbjct: 502 QRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKG 561
Query: 611 KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 670
KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL
Sbjct: 562 KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 621
Query: 671 VDESLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFYN 730
+DE+LSQYSVIMLDEAHERTIHTDVLFGLLK+L+KRR +LRLIVTSATLDAEKFSGYF+N
Sbjct: 622 IDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFN 681
Query: 731 CNIFRIPGRTFPVEVLYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQ 790
CNIF IPGRTFPVE+LYTKQPE+DYLDA+LITVLQIHLTEPEGDIL+FLTGQEEID ACQ
Sbjct: 682 CNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQ 741
Query: 791 SLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGI 850
SLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDP PPGKRKVVVATNIAEASLTIDGI
Sbjct: 742 SLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGI 801
Query: 851 FYVIDPGFAKQNVYNPKQGLDSLVITPIXXXXXXXXXXXXXXTGPGKCYRLYTESAYRNE 910
+YV+DPGFAKQNVYNPKQGL+SLVITPI TGPGKCYRLYTESAYRNE
Sbjct: 802 YYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNE 861
Query: 911 MSPTSIPEIQRINLGTTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEG 970
M PTSIPEIQRINLG TTL MKAMGINDLLSFDFMDPP PQALISAMEQLYSLGALDEEG
Sbjct: 862 MPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEG 921
Query: 971 LLTELGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQK 1030
LLT+LGRKMAEFPL+PPLSKMLLASVDLGCSDEILT+IAMIQTGNIFYRPREKQAQADQK
Sbjct: 922 LLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQADQK 981
Query: 1031 RAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKL 1090
RAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF+QSRSLRRAQDVRKQLL+IMDKYKL
Sbjct: 982 RAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKL 1041
Query: 1091 DVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIY 1150
DVV+AGKNFTKIRKAITAGFFFH ARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIY
Sbjct: 1042 DVVTAGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIY 1101
Query: 1151 HELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHEPNSW 1210
H+LVMTTKEYMREVTVIDPKWLVELAPRFFKV+DPTKMSKRKRQERIEPLYDRYHEPNSW
Sbjct: 1102 HDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKRQERIEPLYDRYHEPNSW 1161
Query: 1211 RLSKRRA 1217
RLSKRRA
Sbjct: 1162 RLSKRRA 1168
Score = 100 bits (250), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 54/66 (81%)
Query: 29 YLSLVSKVCTELESHTGTGDKVLAEFITELGRDSENVEEFDAKLKENGAEMPDYFVKTLL 88
+LSLVS VC ELE+H G+ +KVLAEFI +LGR SE V+EFD LKE GAEMPDYFV++LL
Sbjct: 11 HLSLVSNVCNELETHLGSAEKVLAEFIIDLGRHSETVDEFDKNLKEAGAEMPDYFVRSLL 70
Query: 89 TIIHAI 94
T IH I
Sbjct: 71 TTIHGI 76
>AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein |
chr1:11742356-11749286 REVERSE LENGTH=1034
Length = 1034
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/655 (54%), Positives = 487/655 (74%), Gaps = 3/655 (0%)
Query: 541 DAYGKTITFGQRSKLS-IQEQRQSLPIYKLKKELIQAVHDNQLLVVIGETGSGKTTQVTQ 599
DA K+ +++ L +QE R+SLPIY + +L++AV ++Q+LV++G+TGSGKTTQ+ Q
Sbjct: 370 DAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQ 429
Query: 600 YLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKY 659
YL EAGYT RGK+GCTQPRRVAAMSVA RVA+E G +LG EVGY+IRFEDCT TV+KY
Sbjct: 430 YLHEAGYTKRGKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKY 489
Query: 660 MTDGMLLREILVDESLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATL 719
MTDGMLLRE+L + L+ YSV+++DEAHERT+ TD+LFGL+K + + RP+L+L+++SAT+
Sbjct: 490 MTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATM 549
Query: 720 DAEKFSGYFYNCNIFRIPGRTFPVEVLYTKQPESDYLDASLITVLQIHLTEPEGDILLFL 779
DAEKFS YF IF PGR +PVE+ YT PE+DY+DA+++T+L IH+ EP GDIL+F
Sbjct: 550 DAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFF 609
Query: 780 TGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATN 839
TGQEEI+ A + L R++GLG + ELII P+Y+ LPSE+Q++IF+P P G RKVV+ATN
Sbjct: 610 TGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATN 669
Query: 840 IAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPIXXXXXXXXXXXXXXTGPGKCY 899
IAE SLTIDGI YV+DPGF+K YNP+ G++SL+ITPI T PGKCY
Sbjct: 670 IAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCY 729
Query: 900 RLYTESAYRNEMSPTSIPEIQRINLGTTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQ 959
RLYT Y N++ ++PE+QR NL + L +K++GI+DL++FDFMDPP +AL+ ++E
Sbjct: 730 RLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLEL 789
Query: 960 LYSLGALDEEGLLTELGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQT-GNIFY 1018
L++LGAL++ G LT+ GR+MAEFPLDP LSKM++ S CSDEI++I AM+ G+IFY
Sbjct: 790 LFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFY 849
Query: 1019 RPREKQAQADQKRAKFFQPE-GDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDV 1077
RP++KQ AD R F GDH+ LL VY +WK NFS WC+EN++Q RS++RA+D+
Sbjct: 850 RPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDI 909
Query: 1078 RKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPS 1137
R QL ++++ ++D+ S +RK+I AGFF H A+ YRT+ Q V+IHP+
Sbjct: 910 RDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPN 969
Query: 1138 SALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRK 1192
S L Q P WV+YHELV+T+KEYMR+VT + P+WL+ELAP ++++ D + +K
Sbjct: 970 SGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAASKK 1024
>AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family protein |
chr1:11742356-11749286 REVERSE LENGTH=1044
Length = 1044
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/655 (54%), Positives = 487/655 (74%), Gaps = 3/655 (0%)
Query: 541 DAYGKTITFGQRSKLS-IQEQRQSLPIYKLKKELIQAVHDNQLLVVIGETGSGKTTQVTQ 599
DA K+ +++ L +QE R+SLPIY + +L++AV ++Q+LV++G+TGSGKTTQ+ Q
Sbjct: 380 DAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQ 439
Query: 600 YLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKY 659
YL EAGYT RGK+GCTQPRRVAAMSVA RVA+E G +LG EVGY+IRFEDCT TV+KY
Sbjct: 440 YLHEAGYTKRGKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKY 499
Query: 660 MTDGMLLREILVDESLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATL 719
MTDGMLLRE+L + L+ YSV+++DEAHERT+ TD+LFGL+K + + RP+L+L+++SAT+
Sbjct: 500 MTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATM 559
Query: 720 DAEKFSGYFYNCNIFRIPGRTFPVEVLYTKQPESDYLDASLITVLQIHLTEPEGDILLFL 779
DAEKFS YF IF PGR +PVE+ YT PE+DY+DA+++T+L IH+ EP GDIL+F
Sbjct: 560 DAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFF 619
Query: 780 TGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATN 839
TGQEEI+ A + L R++GLG + ELII P+Y+ LPSE+Q++IF+P P G RKVV+ATN
Sbjct: 620 TGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATN 679
Query: 840 IAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPIXXXXXXXXXXXXXXTGPGKCY 899
IAE SLTIDGI YV+DPGF+K YNP+ G++SL+ITPI T PGKCY
Sbjct: 680 IAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCY 739
Query: 900 RLYTESAYRNEMSPTSIPEIQRINLGTTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQ 959
RLYT Y N++ ++PE+QR NL + L +K++GI+DL++FDFMDPP +AL+ ++E
Sbjct: 740 RLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLEL 799
Query: 960 LYSLGALDEEGLLTELGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQT-GNIFY 1018
L++LGAL++ G LT+ GR+MAEFPLDP LSKM++ S CSDEI++I AM+ G+IFY
Sbjct: 800 LFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFY 859
Query: 1019 RPREKQAQADQKRAKFFQPE-GDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDV 1077
RP++KQ AD R F GDH+ LL VY +WK NFS WC+EN++Q RS++RA+D+
Sbjct: 860 RPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDI 919
Query: 1078 RKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPS 1137
R QL ++++ ++D+ S +RK+I AGFF H A+ YRT+ Q V+IHP+
Sbjct: 920 RDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPN 979
Query: 1138 SALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRK 1192
S L Q P WV+YHELV+T+KEYMR+VT + P+WL+ELAP ++++ D + +K
Sbjct: 980 SGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAASKK 1034
>AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protein |
chr2:14872728-14879615 FORWARD LENGTH=1044
Length = 1044
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/638 (53%), Positives = 475/638 (74%), Gaps = 2/638 (0%)
Query: 557 IQEQRQSLPIYKLKKELIQAVHDNQLLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQ 616
+QE R++LPIY + +L+ AV D+Q+L+++GETGSGKTTQ+ QYL EAGYT GK+GCTQ
Sbjct: 397 LQEDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKLGKVGCTQ 456
Query: 617 PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDESLS 676
PRRVAAMSVA RVA+E G +LG EVGY+IRFEDCT T++KYMTDGMLLRE+L + L
Sbjct: 457 PRRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDLG 516
Query: 677 QYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFYNCNIFRI 736
YSVI++DEAHERT+ TD+LFGL+K + + RP+L+L+++SAT+DAEKFS +F IFR
Sbjct: 517 SYSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDFFDQAPIFRF 576
Query: 737 PGRTFPVEVLYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERM 796
PGR +PV++ +T PE+DY+DA++ TVL IH+ EP GD+L+FL GQEEI+ ++L ++
Sbjct: 577 PGRRYPVDICFTTAPEADYMDAAITTVLTIHVKEPLGDVLVFLPGQEEIEAVEENLKHKI 636
Query: 797 KGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDP 856
+GLG + ELII P+Y+ LPSE+Q++IF+P P G RKVV+ATNIAE SLTIDGI YV+DP
Sbjct: 637 RGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDP 696
Query: 857 GFAKQNVYNPKQGLDSLVITPIXXXXXXXXXXXXXXTGPGKCYRLYTESAYRNEMSPTSI 916
GF+K YNP+ G++SL++TPI T PGKCYRLYT Y N++ ++
Sbjct: 697 GFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNTV 756
Query: 917 PEIQRINLGTTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTELG 976
PEIQR NL + L++K++GI++LL+FDFMDPP +ALI ++E L++LGAL++ G LT+ G
Sbjct: 757 PEIQRTNLASVVLSLKSLGIHNLLNFDFMDPPPSEALIKSLELLFALGALNQLGELTKAG 816
Query: 977 RKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTG-NIFYRPREKQAQADQKRAKFF 1035
R+MAEFPLDP LSKM++ S CSDEI++I AM+ G +IFYRP++KQ AD F
Sbjct: 817 RRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVHADNAMKNFH 876
Query: 1036 QPE-GDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVS 1094
GDH+ L +Y +WK N+S WC+EN++Q RS++RA+D+R QL ++++ ++DV S
Sbjct: 877 VGNVGDHIAFLKIYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDVSS 936
Query: 1095 AGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELV 1154
IRK+I AGFF H A+ YRT+ Q V+IHP+S L Q P WV+YH+LV
Sbjct: 937 NANELDSIRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPASGLSQVLPRWVVYHQLV 996
Query: 1155 MTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRK 1192
+T+KEYMR+VT + P+WL+E+AP ++++ D + +K
Sbjct: 997 LTSKEYMRQVTELKPEWLIEIAPHYYQLKDVEDATSKK 1034
>AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein |
chr5:4122747-4128660 FORWARD LENGTH=1255
Length = 1255
Score = 741 bits (1913), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/813 (46%), Positives = 523/813 (64%), Gaps = 56/813 (6%)
Query: 400 WEAKQLIASGVMSVSEYPT---YDEEGDGLLYQXXXXXXXXXXXXXXXXPAFLQGQSRYS 456
WE +QL+ SG + +E T +EE +L P FL G+ Y+
Sbjct: 400 WEDRQLLRSGAVRGTEVQTEFDSEEERKAILL------------VHDTKPPFLDGRVVYT 447
Query: 457 MDMSPVKIFKNPEGSLGRAAALQSALIKXXXXXXXXXXXTMLDSIPKDLNRPWEDPMPET 516
PV K+P + + S L+K S K R WE
Sbjct: 448 KQAEPVMPVKDPTSDMAIISRKGSGLVKEIREKQ---------SANKSRQRFWELAGSNL 498
Query: 517 G-----ERHLAQ--------------ELRGVGLSAYDMPEWKKDAYGKTITFGQRSKLSI 557
G E+ Q + +G A M + G+ ++ SK ++
Sbjct: 499 GNILGIEKSAEQIDADTAVVGDDGEVDFKGEAKFAQHMKK------GEAVSEFAMSK-TM 551
Query: 558 QEQRQSLPIYKLKKELIQAVHDNQLLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQP 617
EQRQ LPI+ ++ EL+Q + +NQ++VV+GETGSGKTTQ+TQYL E GYT G +GCTQP
Sbjct: 552 AEQRQYLPIFSVRDELLQVIRENQVIVVVGETGSGKTTQLTQYLHEDGYTINGIVGCTQP 611
Query: 618 RRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDESLSQ 677
RRVAAMSVAKRV+EE LG+++GYAIRFED TGP+TVIKYMTDG+LLRE L D L +
Sbjct: 612 RRVAAMSVAKRVSEEMETELGDKIGYAIRFEDVTGPNTVIKYMTDGVLLRETLKDSDLDK 671
Query: 678 YSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFYNCNIFRIP 737
Y V+++DEAHER+++TDVLFG+LK++V RR + +LIVTSATL+A+KFS +F + IF IP
Sbjct: 672 YRVVVMDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSNFFGSVPIFNIP 731
Query: 738 GRTFPVEVLYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMK 797
GRTFPV +LY+K P DY++A++ + IH+T P GDIL+F+TGQ+EI+ AC SL ERM+
Sbjct: 732 GRTFPVNILYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFSLKERME 791
Query: 798 GL----GKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYV 853
L + + L+ILP+YS LP+++Q++IF G RK +VATNIAE SLT+DGI+YV
Sbjct: 792 QLVSSSSREITNLLILPIYSQLPADLQAKIFQKPEDGARKCIVATNIAETSLTVDGIYYV 851
Query: 854 IDPGFAKQNVYNPKQGLDSLVITPIXXXXXXXXXXXXXXTGPGKCYRLYTESAYRNEMSP 913
ID G+ K V+NP+ G+D+L + PI TGPG CYRLYTESAY NEM P
Sbjct: 852 IDTGYGKMKVFNPRMGMDALQVFPISRAASDQRAGRAGRTGPGTCYRLYTESAYLNEMLP 911
Query: 914 TSIPEIQRINLGTTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLT 973
+ +PEIQR NLG L +K++ I++LL FDFMDPP + ++++M QL+ LGAL+ G LT
Sbjct: 912 SPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGGLT 971
Query: 974 ELGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAK 1033
+LG KM EFPLDPPL+KMLL L C DE+LTI++M+ ++F+RP+E+ ++D R K
Sbjct: 972 DLGWKMVEFPLDPPLAKMLLMGERLDCIDEVLTIVSMLSVPSVFFRPKERAEESDAAREK 1031
Query: 1034 FFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVV 1093
FF PE DHLTLL VY+ WK ++ G WC ++++Q + LR+A++VR QLL I+ + K+++
Sbjct: 1032 FFVPESDHLTLLNVYQQWKEHDYRGDWCNDHYLQVKGLRKAREVRSQLLDILKQLKIELR 1091
Query: 1094 SAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALF--QRQPDWVIYH 1151
S G ++ +RKAI + +F ++AR Y P ++HPSSAL+ PD+V+YH
Sbjct: 1092 SCGPDWDIVRKAICSAYFHNSARLKGVGEYVNCRTGMPCHLHPSSALYGLGYTPDYVVYH 1151
Query: 1152 ELVMTTKEYMREVTVIDPKWLVELAPRFFKVAD 1184
EL++TTKEYM+ T ++P WL EL P FF V D
Sbjct: 1152 ELILTTKEYMQCATSVEPHWLAELGPMFFSVKD 1184
>AT2G47250.1 | Symbols: | RNA helicase family protein |
chr2:19399923-19402981 REVERSE LENGTH=729
Length = 729
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/685 (48%), Positives = 473/685 (69%), Gaps = 30/685 (4%)
Query: 537 EWKKDAYGKTITFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQLLVVIGETGSGKTTQ 596
+W AY + I E+R+ LP++ K + + ++ NQ L+++GETGSGKTTQ
Sbjct: 45 KWNGKAYSQRY-------FEILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQ 97
Query: 597 VTQYLAEA---GYTTRGK---IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDC 650
+ Q++ +A + +G+ +GCTQPRRVAAMSV++RVA+E +GEEVGY+IRFEDC
Sbjct: 98 IPQFVLDAVVADNSDKGRKWLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDC 157
Query: 651 TGPDTVIKYMTDGMLLREILVDESLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPEL 710
T T++KY+TDGMLLRE + D L +Y VI+LDEAHERT+ TDVLFGLLK++++ RP+L
Sbjct: 158 TSSRTMLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDL 217
Query: 711 RLIVTSATLDAEKFSGYFYNCNIFRIPGRTFPVEVLYTKQPESDYLDASLITVLQIHLTE 770
+L+V SATL+AEKF YF + ++PGR PVE+ YT++PE DYL+A++ TV+QIH+ E
Sbjct: 218 KLVVMSATLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCE 277
Query: 771 PEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAP-- 828
P GDIL+FLTG+EEI+ AC+ + + + LG V + ++P+YS LP MQ +IFDPAP
Sbjct: 278 PPGDILVFLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVP 337
Query: 829 -----PGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPIXXXXX 883
P RK+VV+TNIAE SLTIDGI YVIDPGFAKQ VYNP+ ++SL+++PI
Sbjct: 338 LTEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASA 397
Query: 884 XXXXXXXXXTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGTTTLNMKAMGINDLLSFD 943
T PGKC+RLYTE ++ N++ P + PEI R NL T L +K +GI+DL+ FD
Sbjct: 398 HQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFD 457
Query: 944 FMDPPSPQALISAMEQLYSLGALDEEGLLTELGRKMAEFPLDPPLSKMLLASVDLGCSDE 1003
FMDPP+P+ L+ A+E L LGALD+EG LT+ G M+EFPLDP +SKML+ S + CS+E
Sbjct: 458 FMDPPAPETLMRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNE 517
Query: 1004 ILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFE 1063
IL++ AM+ N F RPRE Q AD+ +A+F +GDHLTLL VY A+K N WCFE
Sbjct: 518 ILSVSAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPNWCFE 577
Query: 1064 NFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKN----FTKIRKAITAGFFFHAARKDP 1119
NFV +R+++ A +VR+QL+ IM ++ L + S N + IRKA+ AG+F A +
Sbjct: 578 NFVNNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLER 637
Query: 1120 QEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRF 1179
Y T+ +NQ V++HPS+ L +P+WVIY+E V+TT+ ++R VT I +WLV++A +
Sbjct: 638 TGHYLTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHY 696
Query: 1180 FKVAD-PTKMSKRKRQERIEPLYDR 1203
+ +++ P +KR +E LY +
Sbjct: 697 YDLSNFPNCEAKRA----LEKLYKK 717
>AT3G62310.1 | Symbols: | RNA helicase family protein |
chr3:23057516-23060561 REVERSE LENGTH=726
Length = 726
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/665 (50%), Positives = 471/665 (70%), Gaps = 23/665 (3%)
Query: 557 IQEQRQSLPIYKLKKELIQAVHDNQLLVVIGETGSGKTTQVTQYLAEA-GYTTRGK---- 611
I E+R++LP++ K+E ++ +++NQ L+++GETGSGKTTQ+ Q++ +A T K
Sbjct: 54 ILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRKW 113
Query: 612 -IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 670
+GCTQPRRVAAMSV++RVAEE +GEEVGY+IRFEDC+ P TV+KY+TDGMLLRE +
Sbjct: 114 LVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAM 173
Query: 671 VDESLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFYN 730
D L +Y VI+LDEAHERT+ TDVLFGLLK+++K RP+L+L+V SATL+AEKF YF
Sbjct: 174 ADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFSG 233
Query: 731 CNIFRIPGRTFPVEVLYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQ 790
+ ++PGR PVE+ YT++PE DYL+A++ TV+QIH+ EP GDIL+FLTG+EEI+ AC+
Sbjct: 234 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACR 293
Query: 791 SLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAP-------PGKRKVVVATNIAEA 843
+ + + LG V + ++P+YS LP MQ +IFDPAP P RK+VV+TNIAE
Sbjct: 294 KINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVVSTNIAET 353
Query: 844 SLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPIXXXXXXXXXXXXXXTGPGKCYRLYT 903
SLTIDGI YVIDPGFAKQ VYNP+ ++SL+++PI T PGKC+RLYT
Sbjct: 354 SLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYT 413
Query: 904 ESAYRNEMSPTSIPEIQRINLGTTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSL 963
E ++ N++ P + PEI R NL T L +K +GI+DL+ FDFMDPP+P+ L+ A+E L L
Sbjct: 414 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 473
Query: 964 GALDEEGLLTELGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREK 1023
GALD++G LT+ G M+EFPLDP ++KML+ S + CS+EIL++ AM+ N F RPRE
Sbjct: 474 GALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPNCFIRPREA 533
Query: 1024 QAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLT 1083
Q AD+ +A+F EGDHLTLL VY A+K N WC+ENF+ +R+++ A +VR+QL+
Sbjct: 534 QKAADEAKARFGHIEGDHLTLLNVYHAFKQNNEDPNWCYENFINNRAMKSADNVRQQLVR 593
Query: 1084 IMDKYKLDVVSAGKN----FTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSA 1139
IM ++ L + S N + IRKA+ AG+F A + Y T+ +NQ V++HPS+
Sbjct: 594 IMSRFNLKMCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 653
Query: 1140 LFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVAD-PTKMSKRKRQERIE 1198
L +P+WVIY+E V+T++ ++R VT I +WLV++A ++ +++ P +KR IE
Sbjct: 654 L-DHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDVASHYYDLSNFPNCEAKRV----IE 708
Query: 1199 PLYDR 1203
LY +
Sbjct: 709 KLYKK 713
>AT4G18465.1 | Symbols: | RNA helicase family protein |
chr4:10197056-10201611 FORWARD LENGTH=695
Length = 695
Score = 596 bits (1537), Expect = e-170, Method: Compositional matrix adjust.
Identities = 295/648 (45%), Positives = 426/648 (65%), Gaps = 22/648 (3%)
Query: 556 SIQEQRQSLPIYKLKKELIQAVHDNQLLVVIGETGSGKTTQVTQYLAEAGYTTRGK-IGC 614
+I++QRQ LP+YK + E++ V ++ +++GETGSGKTTQ+ QYL EAG+ G+ I C
Sbjct: 40 NIEKQRQRLPVYKYRTEILYLVENHATTIIVGETGSGKTTQIPQYLKEAGWAEGGRVIAC 99
Query: 615 TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFED-CTGPDTVIKYMTDGMLLREILVDE 673
TQPRR+A +V+ RVAEE G LGEEVGY IRFED T T +K++TDG+L+RE++ D
Sbjct: 100 TQPRRLAVQAVSARVAEEMGVNLGEEVGYTIRFEDHTTSGVTSVKFLTDGVLIREMMEDP 159
Query: 674 SLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFYNCN- 732
L++YSVIM+DEAHER+I TD+L GLLK++ +RRPELRLI++SAT++A+ S +F +
Sbjct: 160 LLTKYSVIMIDEAHERSISTDILLGLLKKIQRRRPELRLIISSATIEAKTMSNFFNSSKK 219
Query: 733 ----------------IFRIPGRTFPVEVLYTKQPESDYLDASLITVLQIHLTEPEGDIL 776
I + GR F V++ Y ++P SDY+ + + T+L I+ EP GD+L
Sbjct: 220 RHAPEGSTPGPKLEPAILSVEGRGFSVKIHYVEEPVSDYIRSVVSTILLINEREPPGDVL 279
Query: 777 LFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVV 836
+FLTGQE+I+ A + L E KN L+ LP+YS L Q IF P P GKRKV++
Sbjct: 280 VFLTGQEDIETAIKLLEEEAHSNQKNSSGLLPLPLYSGLSRSEQELIFTPTPRGKRKVIL 339
Query: 837 ATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPIXXXXXXXXXXXXXXTGPG 896
+TNIAE SLT++G+ YVID GF+KQ YNP ++SLV+ PI PG
Sbjct: 340 STNIAETSLTLEGVVYVIDSGFSKQKFYNPISDIESLVVAPISKASARQRSGRAGRVRPG 399
Query: 897 KCYRLYTESAYRNEMSPTSIPEIQRINLGTTTLNMKAMGINDLLSFDFMDPPSPQALISA 956
KCYRLYTE + N+M IPE+QR NL +T + +KA+GI+++L FD+ PPS +A+I A
Sbjct: 400 KCYRLYTEDYFLNQMPGEGIPEMQRSNLVSTVIQLKALGIDNILGFDWPAPPSSEAMIRA 459
Query: 957 MEQLYSLGALDEEGLLTE-LGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGN 1015
+E LYSL LD++ LT G ++AE PLDP +SKM+LAS +LGCS EI+TI A++ +
Sbjct: 460 LEVLYSLQILDDDAKLTSPTGFQVAELPLDPMISKMILASSELGCSHEIITIAAVLSVQS 519
Query: 1016 IFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQ 1075
++ R Q + D+ + +F EGDH+T L VY+ + WC++NF+ +S+++
Sbjct: 520 VWIIARGVQKEQDEAKLRFAAAEGDHVTFLNVYKGFLESKKPTQWCYKNFLNYQSMKKVV 579
Query: 1076 DVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEG--YRTLVENQPVY 1133
++R QL I + + + S + +RKA+TAGFF +A R +P Y+T+ ++ VY
Sbjct: 580 EIRDQLKRIARRLGITLKSCDGDMEAVRKAVTAGFFANACRLEPHSNGVYKTIRGSEEVY 639
Query: 1134 IHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFK 1181
IHPSS LF+ P WV+Y +V T ++YMR V I+P WL E+AP F++
Sbjct: 640 IHPSSVLFRVNPKWVVYQSIVSTERQYMRNVVTINPSWLTEVAPHFYQ 687
>AT1G26370.1 | Symbols: | RNA helicase family protein |
chr1:9122030-9125368 REVERSE LENGTH=717
Length = 717
Score = 577 bits (1487), Expect = e-164, Method: Compositional matrix adjust.
Identities = 298/693 (43%), Positives = 435/693 (62%), Gaps = 60/693 (8%)
Query: 549 FGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQLLVVIGETGSGKTTQVTQYLAEAGYTT 608
F R K I E R+SLPI ++K L++ V N +L+++GETGSGKTTQ+ Q+L AG+
Sbjct: 28 FSMRQK--IAEHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCR 85
Query: 609 RGK-IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLR 667
GK IG TQPRR+AA++VAKRVAEE +LG++VGY+IRF+D T T +KYMTDG+LLR
Sbjct: 86 EGKMIGITQPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLR 145
Query: 668 EILVDESLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPE------------------ 709
E L+D LS+YSVI++DEAH+R++HTDVL LLK++ + R +
Sbjct: 146 EALLDPHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQRTRSQPVSEKTEFGNVASQVQTT 205
Query: 710 -----------------------LRLIVTSATLDAEKFSGYFYNCNIFRIPGRTFPVEVL 746
L+LI+ SA+LDA FS YF + GR FPV++L
Sbjct: 206 TRDANGPQQNGVLKGYQGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDIL 265
Query: 747 YTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPEL 806
YT PESDY+DA+L+T+ QIH E GDIL+FLTGQ+EI+ + + ER++ + ++ +L
Sbjct: 266 YTVHPESDYVDATLVTIFQIHFEEKPGDILVFLTGQDEIESVERLVQERLQNIPEDKRKL 325
Query: 807 IILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNP 866
+ L ++SALPSE Q ++F PAP G RKV++ATNIAE S+TI GI YVIDPGF K Y+P
Sbjct: 326 LPLAIFSALPSEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDP 385
Query: 867 KQGLDSLVITPIXXXXXXXXXXXXXXTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGT 926
+G++SL + P GPGK +RLY E + ++ ++ PEI+R NL
Sbjct: 386 SKGMESLDVVPASKAQTLQRSGRAGREGPGKSFRLYPEREF-EKLEDSTKPEIKRCNLSN 444
Query: 927 TTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTE-LGRKMAEFPLD 985
L +KA+GI+D++ FDF+D PS A+I A+ +L+SLGAL ++G L +G +M+ PL+
Sbjct: 445 IILQLKALGIDDIVGFDFIDKPSRGAIIKALAELHSLGALADDGKLENPVGYQMSRLPLE 504
Query: 986 PPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLL 1045
P SK L+ + C +E+L +A++ +IFY PREK+ +A + F EGDHLT L
Sbjct: 505 PVYSKALILANQFNCLEEMLITVAVLSVESIFYDPREKREEARTSKNHFASVEGDHLTYL 564
Query: 1046 AVY----EAWKAKNFSGP----------WCFENFVQSRSLRRAQDVRKQLLTIMDKYKLD 1091
+VY E + + +G WC EN+V SRSL+ A+D+ +Q+ +++ +
Sbjct: 565 SVYRESDEFLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQIGFN 624
Query: 1092 VVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYH 1151
V S G + R+ + A FF AA++ YR L + V+IHP+S LF+ +P+ VI++
Sbjct: 625 VSSCGNDMLAFRRCLAASFFLKAAQRQLDGTYRALESGEVVHIHPTSVLFRAKPECVIFN 684
Query: 1152 ELVMTTKEYMREVTVIDPKWLVELAPRFFKVAD 1184
EL+ T+K+Y++ +T+ID WL ELAP F+ A+
Sbjct: 685 ELMQTSKKYIKNLTIIDSLWLSELAPHHFQTAE 717
>AT1G27900.1 | Symbols: | RNA helicase family protein |
chr1:9715615-9720346 REVERSE LENGTH=700
Length = 700
Score = 539 bits (1388), Expect = e-153, Method: Compositional matrix adjust.
Identities = 276/644 (42%), Positives = 408/644 (63%), Gaps = 24/644 (3%)
Query: 563 SLPIYKLKKELIQAVHDNQLLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAA 622
+LPI + ++++++ V N ++V+IGETGSGK+TQ++Q L GYT G I TQPRRVAA
Sbjct: 3 NLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQPRRVAA 62
Query: 623 MSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDESLSQYSVIM 682
+SVA+RVA+E LGE+VGYAIRFED T T IKY+TDG+LLRE L + L YSVI+
Sbjct: 63 VSVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYSVII 122
Query: 683 LDEAHERTIHTDVLFGLLKQLVK-RRPELRLIVTSATLDAEKFSGYFYNCNIFRIPGRTF 741
LDEAHER+++TD+L GL+K+LV+ R ++++TSATLD EK S +F C + +PG+ +
Sbjct: 123 LDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGKLY 182
Query: 742 PVEVLYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGK 801
PVE+LY+K+ Y+++SL + IH+ EPEGDIL+F+TGQ++I+ L E+++ L +
Sbjct: 183 PVEILYSKERPVSYIESSLKVAIDIHVREPEGDILIFMTGQDDIEKLVSRLEEKVRSLAE 242
Query: 802 -NVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAK 860
+ + II P++ +LP EMQ R+F P PP R+ +V+TNIAE SLT+DG+ YVID G+ K
Sbjct: 243 GSCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGYVK 302
Query: 861 QNVYNPKQGLDSLVITPIXXXXXXXXXXXXXXTGPGKCYRLYTESAYRNEMSPTSIPEIQ 920
Q YNP G+ SL + I T PGKCYRLY + YR++ +IPEIQ
Sbjct: 303 QRQYNPSSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATIPEIQ 362
Query: 921 RINLGTTTLNMKAMGIN--DLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTELGRK 978
R +L + L +K++ + D+L FDF+D PS ++L A++QLY + A+DE G +T +GR
Sbjct: 363 RTSLAGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDAIDENGAITRIGRT 422
Query: 979 MAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQ-P 1037
M++ PL+P LS+ L+ + + GC + LT++AM+ R K ++ +K + P
Sbjct: 423 MSDLPLEPSLSRTLIEANETGCLSQALTVVAMLSAETTLLPARSKPSEKKRKHDEDSNLP 482
Query: 1038 E----GDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVV 1093
GDH+ LL ++E+W N+ WC EN +Q R + +DVR+QL IM K D +
Sbjct: 483 NGSGYGDHIQLLQIFESWDRTNYDPVWCKENGMQVRGMVFVKDVRRQLCQIMQKISKDRL 542
Query: 1094 SAGK---------NFTKIRKAITAGFFFHAA-RKDPQEGYRTL-VENQPVYIHPSSALFQ 1142
G ++ K+RKA+ G A R GYRTL ++Q V +HPSS L
Sbjct: 543 EVGADGRKSSSRDDYRKLRKALCVGNANQIAERMLRHNGYRTLSFQSQLVQVHPSSVLSA 602
Query: 1143 RQ----PDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKV 1182
P++V+YHEL+ TT+ +MR V +D W+ + + K+
Sbjct: 603 DNDGMMPNYVVYHELISTTRPFMRNVCAVDMAWVAPIKRKIEKL 646
>AT4G16680.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:9388613-9390774
REVERSE LENGTH=656
Length = 656
Score = 517 bits (1332), Expect = e-146, Method: Compositional matrix adjust.
Identities = 247/420 (58%), Positives = 318/420 (75%), Gaps = 4/420 (0%)
Query: 558 QEQRQSLPIYKLKKELIQAVHDNQLLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQP 617
+E R+ LPI+ ++EL++ + +NQ+LV++GETGSGKTTQ+ QYL EAGYT RGKIGCTQP
Sbjct: 209 REGREFLPIHGYREELLKLIEENQVLVIVGETGSGKTTQIPQYLQEAGYTKRGKIGCTQP 268
Query: 618 RRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDESLSQ 677
RRVAAMSVA RVA+E G +LG EVGY+IRFEDCT TVIKYMTDGMLLRE+L++ L
Sbjct: 269 RRVAAMSVASRVAQEVGVKLGHEVGYSIRFEDCTSEKTVIKYMTDGMLLRELLIEPKLDS 328
Query: 678 YSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFYNCNIFRIP 737
YSVI++DEAHERT+ TD+LF L+K + K RP+LRLI++SATL+A+KFS YF + I+ IP
Sbjct: 329 YSVIIIDEAHERTLSTDILFALVKDVAKVRPDLRLIISSATLEAKKFSEYFDSARIYLIP 388
Query: 738 GRTFPVEVLYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMK 797
GR +PVE L+ K PE DYL+ + TV+QIH TE GDIL+FLTGQEEI+ +L RM
Sbjct: 389 GRRYPVEKLFRKCPEPDYLETVIRTVVQIHQTEAIGDILVFLTGQEEIETVETNLKRRMM 448
Query: 798 GLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPG 857
LG E+II P+YS LP+ +Q+++F+PAP G RKVV+ATNIAE SLTIDG+ YVIDPG
Sbjct: 449 DLGTKGSEIIICPIYSNLPTPLQAKVFEPAPKGTRKVVLATNIAETSLTIDGVKYVIDPG 508
Query: 858 FAKQNVYNPKQGLDSLVITPIXXXXXXXXXXXXXXTGPGKCYRLYTESAYRNEMSPTSIP 917
+ K N YNP+ G++SL++TPI TGPGKC+RLY ++ PT+IP
Sbjct: 509 YCKINSYNPRTGMESLLVTPISKASAAQRAGRSGRTGPGKCFRLYN----IKDLEPTTIP 564
Query: 918 EIQRINLGTTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTELGR 977
EIQR NL + L +K++GI D+ +FDFMDPP AL+ A+E LY+LGALDE G +T+ R
Sbjct: 565 EIQRANLASVVLTLKSLGIQDVFNFDFMDPPPENALLKALELLYALGALDEIGEITKGTR 624
>AT5G10370.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related |
chr5:3261245-3267188 FORWARD LENGTH=1775
Length = 1775
Score = 390 bits (1003), Expect = e-108, Method: Compositional matrix adjust.
Identities = 232/646 (35%), Positives = 364/646 (56%), Gaps = 44/646 (6%)
Query: 564 LPIYKLKKELIQAVHDNQLLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAM 623
LPIY ++++++ +H Q++V+IGETGSGK+TQ+ Q+LA++G I CTQPR++AAM
Sbjct: 306 LPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 365
Query: 624 SVAKRVAEEF-GCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDESLSQYSVIM 682
++A RV EE GC V F + + YMTD LL+ + D SLS S ++
Sbjct: 366 TLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVI 425
Query: 683 LDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFYNCNIFRIPGRTFP 742
+DEAHER+++TD+L LLK+L+ RR +LRL++ SAT DA++ S YF++C I + GR FP
Sbjct: 426 IDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFFSCGILLVNGRNFP 485
Query: 743 VEVLYTKQPE---------SDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLY 793
VE++Y+ + Y+ + ++IH TE EG IL FLT Q E+++AC+
Sbjct: 486 VEIVYSPSDTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACERFI 545
Query: 794 ERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYV 853
P I LP++ L E Q R+F PG+RKV+ ATNIAE SLTI G+ YV
Sbjct: 546 ---------TPSAIALPLHGKLSFEEQFRVFQNH-PGRRKVIFATNIAETSLTIPGVKYV 595
Query: 854 IDPGFAKQNVYNPKQGLDSLVITPIXXXXXXXXXXXXXXTGPGKCYRLYTESAYRNEMSP 913
ID G K++ Y P+ G+ L + + T PG+CYRLY+++ + + M+
Sbjct: 596 IDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKNDF-DSMNL 654
Query: 914 TSIPEIQRINLGTTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLT 973
PEI+R++LG L M A+G+N++ F+F+D P P+A+ A++ L LGA+ E+ +
Sbjct: 655 NQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAPVPEAIAMAVQNLVQLGAVVEKNGVH 714
Query: 974 EL---GRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIA-MIQTGNIFYR--PREKQAQA 1027
EL G + + L+P L K++L E + + A M +IF R + + +A
Sbjct: 715 ELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKA 774
Query: 1028 DQKRAKFFQPEGDHLTLLAVYEAWKA--KNFSGPWCFENFVQSRSLRRAQDVRKQLLTIM 1085
D+ + +F GD TLL+VY+ W + + WC+EN + ++S+RR +D K+L +
Sbjct: 775 DRLKVQFCNQNGDLFTLLSVYKEWASLPRERRNKWCWENSLNAKSMRRCEDTVKELEICI 834
Query: 1086 DKYKLDVVS----------AGKNFTKIRKAITAGFFFHAARKD--PQEGYRTLVENQPVY 1133
++ +L +VS K+ ++ I A + A Q GY + Q V
Sbjct: 835 ER-ELTLVSPSYWVWNPNEGTKHDKHLKMVILASLAENVAMYTGYNQLGYEVALTGQQVQ 893
Query: 1134 IHPSSAL--FQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAP 1177
+HPS +L F ++P WV++ EL+ +Y+ VT D + L L P
Sbjct: 894 LHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTACDFEALYMLDP 939
>AT4G01020.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related |
chr4:439086-445043 FORWARD LENGTH=1787
Length = 1787
Score = 378 bits (970), Expect = e-104, Method: Compositional matrix adjust.
Identities = 228/646 (35%), Positives = 362/646 (56%), Gaps = 44/646 (6%)
Query: 564 LPIYKLKKELIQAVHDNQLLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAM 623
LPIY ++++++ +H Q++V+IGETGSGK+TQ+ Q+LA++G I CTQPR++AAM
Sbjct: 303 LPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 362
Query: 624 SVAKRVAEEF-GCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDESLSQYSVIM 682
++ RV EE GC V F + + YMTD LL+ + D SLS S ++
Sbjct: 363 TLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVI 422
Query: 683 LDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFYNCNIFRIPGRTFP 742
+DEAHER+++TD+L LL++L+ RR +LRL++ SAT DA + S Y ++C I + GR FP
Sbjct: 423 IDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNGRNFP 482
Query: 743 VEVLYTKQPE---------SDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLY 793
VE++Y+ + Y + ++IH TE EG IL FLT Q E+++AC+
Sbjct: 483 VEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACERFV 542
Query: 794 ERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYV 853
P I LP++ L E Q +F PG+RKV+ ATNIAE SLTI G+ YV
Sbjct: 543 ---------APSAIALPLHGKLSFEEQFMVFQNY-PGRRKVIFATNIAETSLTIPGVKYV 592
Query: 854 IDPGFAKQNVYNPKQGLDSLVITPIXXXXXXXXXXXXXXTGPGKCYRLYTESAYRNEMSP 913
ID G K++ Y P+ G+ L + + T PG+CYRLY+++ + + M+
Sbjct: 593 IDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKTDF-DSMNL 651
Query: 914 TSIPEIQRINLGTTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLT 973
PEI+R++LG L M A+GI+++ +F+F+D P P+A+ A++ L LGA+ E+ +
Sbjct: 652 NQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEAIAMAIQNLVQLGAVVEKNGVL 711
Query: 974 EL---GRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIA-MIQTGNIFYR--PREKQAQA 1027
EL G + + L+P L K++L E + + A M +IF R + + +A
Sbjct: 712 ELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKA 771
Query: 1028 DQKRAKFFQPEGDHLTLLAVYEAWKA--KNFSGPWCFENFVQSRSLRRAQDVRKQLLTIM 1085
D+ + +F GD TLL+VY+ W + ++ WC+EN + ++S+RR +D K+L +
Sbjct: 772 DRLKVQFCNDNGDLFTLLSVYKEWASLPRDRRNKWCWENSLNAKSMRRCEDTVKELEICI 831
Query: 1086 DKYKLDVVS----------AGKNFTKIRKAITAGFFFHAARKD--PQEGYRTLVENQPVY 1133
++ +L +VS K+ ++ I A + A Q GY + +Q V
Sbjct: 832 ER-ELTLVSPSYWVWNPNEGTKHDKYLKMVILASLAENVAMYTGYDQLGYEVALTSQQVQ 890
Query: 1134 IHPSSAL--FQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAP 1177
+HPS +L F ++P WV++ EL+ +Y+ VT D + L L P
Sbjct: 891 LHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTAFDFEALYMLDP 936
>AT5G14900.1 | Symbols: | helicase associated (HA2) domain-containing
protein | chr5:4822676-4823581 REVERSE LENGTH=301
Length = 301
Score = 224 bits (572), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/277 (40%), Positives = 174/277 (62%), Gaps = 9/277 (3%)
Query: 923 NLGTTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTELGRKMAEF 982
NL T L +K + + +L+ FD +D P+P L A++ LY LGALD++ LT+ G M+EF
Sbjct: 3 NLANTVLTLKGLSVKNLVRFDLIDSPAPDTLARALDDLYHLGALDDDCNLTKTGEMMSEF 62
Query: 983 PLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPR-EKQAQADQKRAKFFQPEGDH 1041
PLDP ++KML+ S CS+EIL+I AM+ N F RPR E Q AD+ ++ F +GDH
Sbjct: 63 PLDPQMAKMLIVSPQFNCSNEILSISAMLSVPNCFIRPRGEAQKAADEAKSSFAHIDGDH 122
Query: 1042 LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKN--- 1098
LTLL ++ A+ N WC F+ R+++ A VR+QL+ IM ++++ + S N
Sbjct: 123 LTLLNLFHAFLQNNQDPNWCCTKFINYRAMKSAVSVREQLVRIMLRFQIKLCSPDFNSRD 182
Query: 1099 -FTKIRKAITAGFFFHAARKDPQEGYRTL--VENQPVYIHPSSALFQRQPDWVIYHELVM 1155
+ IRKA+ AG+F A + Y T ++Q V++HPS+ L +P+WV+Y+E V
Sbjct: 183 YYVNIRKALLAGYFMQVAHLERTGHYLTFRDKDDQVVHLHPSNCL-DHKPEWVVYNEYVF 241
Query: 1156 TTKEYMREVTVIDPKWLVELAPRFFKVAD-PTKMSKR 1191
T++ ++R VT I +WLV++AP ++K+A+ P+ +KR
Sbjct: 242 TSRNFIRTVTHIRGEWLVDVAPHYYKLANFPSSEAKR 278
>AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protein |
chr1:12099738-12104108 REVERSE LENGTH=1237
Length = 1237
Score = 211 bits (536), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/277 (41%), Positives = 175/277 (63%), Gaps = 34/277 (12%)
Query: 557 IQEQRQSLPIYKLKKELIQAVHDNQLLVVIGETGSGKTTQVTQYLAEAGYTTR------G 610
++E R+ LPI +++E+++A++ + +++ G+TG GKTTQV Q+L EAG+ ++ G
Sbjct: 234 VEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRSG 293
Query: 611 KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 670
IG TQPRRVA ++ AKRVA E G RLG+EVG+ +R++ G ++ IK+MTDG+LLREI
Sbjct: 294 IIGITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREIQ 353
Query: 671 VDESLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPE--------------------- 709
D L +YSVI+LDEAHER+++TD+L G+L +++K R E
Sbjct: 354 NDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKSLQSGGTVTSECQI 413
Query: 710 --LRLIVTSATLDAEKF-SGYFYNCNI---FRIPGRTFPVEVLYTKQPE-SDYLDASLIT 762
L+LI+ SATL E F SG NI +P R +PV + ++K+ E DY+ +
Sbjct: 414 TPLKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKTEIVDYIGEAYKK 473
Query: 763 VLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGL 799
V+ IH P+G IL+F+TGQ E+D+ C+ L + K L
Sbjct: 474 VMSIHKKLPQGGILVFVTGQREVDYLCEKLRKSSKEL 510
Score = 179 bits (455), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 131/476 (27%), Positives = 215/476 (45%), Gaps = 68/476 (14%)
Query: 805 ELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVY 864
+L +LP+Y+ L Q R+F+ +R VVVATN+AE SLTI GI YV+D G K Y
Sbjct: 646 KLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVKNY 705
Query: 865 NPKQGLDSLVITPIXXXXXXXXXXXXXXTGPGKCYRLYTESAYRNEMSPTSIPEIQRINL 924
+ K G++S + I TGPG CYRLY+ + + N +S+PEI ++ +
Sbjct: 706 DSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEESSLPEIMKVPV 765
Query: 925 GTTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTELGRKMAEFPL 984
L MK+M I + +F F PP P A+ A L +L ALD G LT LG+ M+ +P+
Sbjct: 766 DGVILLMKSMNIPKVENFPFPTPPEPSAIREAERCLKALEALDSNGGLTPLGKAMSHYPM 825
Query: 985 DPPLSKMLL--------------ASVDLGCSDEILTIIAM---------------IQTGN 1015
P S+MLL A++ LG + + +++ + +
Sbjct: 826 SPRHSRMLLTVIQMLKETRNYSRANLILGYAVAAVAALSLPNPLIMEFEGEKKNESKDAD 885
Query: 1016 IFYRPREKQAQADQK------RAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSR 1069
+ +KQ + D+K R +F P D LT+ +++ +C N + +
Sbjct: 886 KTVKQEDKQRKKDRKEKIKAARDRFSNPSSDALTVAYALHSFEVSENGMGFCEANGLHLK 945
Query: 1070 SLRRAQDVRKQLL---------------------TIMD---KYKLDVVSAGKN------F 1099
++ ++ QLL TI D +++ ++ K
Sbjct: 946 TMDEMSKLKDQLLRLVFNCCKPSETEDSFSWTHGTIQDVEKSWRITTSTSSKTPLLQNEE 1005
Query: 1100 TKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKE 1159
+ +AI AG+ ARK Y+ +PV++H S+L P+ ++Y EL++T +
Sbjct: 1006 ELLGEAICAGWADRVARKTRATEYQACAVQEPVFLHRWSSLINSAPELLVYSELLLTNRP 1065
Query: 1160 YMREVTVIDPKWLVELAPRFFKVADPTKMSK---RKRQERIEPLYDRYHEPNSWRL 1212
YM T + P+WLV+ A + P K K ++R+ P++W L
Sbjct: 1066 YMHGATRVRPEWLVKHAKSLCVFSAPLKDPKPYYSSEEDRVLCWVVPSFGPHNWEL 1121
>AT2G35920.1 | Symbols: | RNA helicase family protein |
chr2:15075674-15080506 FORWARD LENGTH=995
Length = 995
Score = 187 bits (475), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 135/436 (30%), Positives = 218/436 (50%), Gaps = 31/436 (7%)
Query: 756 LDASLI--TVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYS 813
+D L+ T+ I E G IL+FLTG +EI + + M + + ++LP++
Sbjct: 485 IDVDLVEATIEHICRLEGGGAILVFLTGWDEISKLLEKI--NMNNFLGDSSKFLVLPLHG 542
Query: 814 ALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSL 873
++P+ Q IFD PP KRK+V+ATNIAE+S+TID + YV+D G AK+ Y+ + L
Sbjct: 543 SMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACL 602
Query: 874 VITPIXXXXXXXXXXXXXXTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGTTTLNMKA 933
+ + I G CYRLY + Y + +PEI R L L++K+
Sbjct: 603 LPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIY-DAFPQYQLPEIIRTPLQELCLHIKS 661
Query: 934 MGINDLLSF--DFMDPPSPQALISAMEQLYSLGALDEEGLLTELGRKMAEFPLDPPLSKM 991
+ + + SF + PP A+ +A+E L ++GAL++ LT LGR + P+DP + KM
Sbjct: 662 LQVGSIGSFLAKALQPPDALAVENAIELLKTIGALNDVEELTPLGRHLCTLPVDPNIGKM 721
Query: 992 LLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPE--GDHLTLLAVYE 1049
LL C + LTI A + + F P ++ +AD+ + ++F + DH+ LL YE
Sbjct: 722 LLIGAIFQCVNPALTIAAALAYRSPFVLPLNRKEEADEAK-RYFAGDSCSDHIALLKAYE 780
Query: 1050 AWKAKNFSG---PWCFENFVQSRSLRRAQDVRKQLLTIM------DKYKLDVVSA-GKNF 1099
++ G +C++NF+ +LR +D+R Q L ++ DK K + + +
Sbjct: 781 GYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLSDIGFVDKSKPNAYNQYSYDM 840
Query: 1100 TKIRKAITAGFF---FHAARKDPQEGYRTLVENQPVYIHPSSA-----LFQRQPDWVIYH 1151
I + AG + R+ + + T E V IHP S LF +++Y
Sbjct: 841 EMISAVLCAGLYPNVVQCKRRGKRTAFYT-KELGKVDIHPGSVNARVNLFSLP--YLVYS 897
Query: 1152 ELVMTTKEYMREVTVI 1167
E V TT Y+R+ T I
Sbjct: 898 EKVKTTSVYIRDSTNI 913
Score = 173 bits (438), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 128/191 (67%), Gaps = 4/191 (2%)
Query: 561 RQSLPIYKLKKELIQAVHDNQLLVVIGETGSGKTTQVTQYLAEAGYTT-RG---KIGCTQ 616
R+ LP +K+K+E + +V NQ+LVV GETG GKTTQ+ Q++ E ++ RG I CTQ
Sbjct: 225 REKLPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFILEEEISSLRGADCNIICTQ 284
Query: 617 PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDESLS 676
PRR++A+SVA R++ E G +GE VGY IR E T + + T G+LLR ++ D +L+
Sbjct: 285 PRRISAISVASRISAERGESIGESVGYQIRLESKRSDQTRLLFCTTGVLLRRLIEDPNLT 344
Query: 677 QYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFYNCNIFRI 736
S +++DE HER ++ D L +L+ L+ RRP+LRLI+ SAT++A+ FS YF N I
Sbjct: 345 NVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADMFSTYFGNSPTMHI 404
Query: 737 PGRTFPVEVLY 747
PG TFPV L+
Sbjct: 405 PGFTFPVAELF 415
>AT1G48650.1 | Symbols: | DEA(D/H)-box RNA helicase family protein |
chr1:17989670-17995169 REVERSE LENGTH=1197
Length = 1197
Score = 180 bits (457), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 136/488 (27%), Positives = 240/488 (49%), Gaps = 36/488 (7%)
Query: 705 KRRPELRLIVTSATLDAEKFSGYFYNCNIFRIPGRTFPVEVLYTKQPESDYLDASLITVL 764
K+R L L+A F GY + + L P+S + +LI +
Sbjct: 522 KKRKSLISSAVEDALEAADFKGYNFRTR-----------DSLSCWSPDS--IGFNLIENV 568
Query: 765 QIHLTEPE--GDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSR 822
H+ + E G +L+F+TG ++I+ + ++ E LG + ++++L + ++ S Q
Sbjct: 569 LCHIVKGERPGAVLVFMTGWDDIN-SLKNQLEAHSLLG-DPNKVLLLACHGSMASSEQRL 626
Query: 823 IFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPIXXXX 882
IFD P G RK+V+ATN+AE S+TI+ + YVID G AK+ Y+ L+ + I
Sbjct: 627 IFDRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAA 686
Query: 883 XXXXXXXXXXTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGTTTLNMKAMGINDLLSF 942
PG+CY LY Y + PE+ R L + L +K++G+ + F
Sbjct: 687 ARQRRGRAGRVMPGECYHLYPRCVYE-AFADYQQPELLRTPLQSLCLQIKSLGLGSISEF 745
Query: 943 --DFMDPPSPQALISAMEQLYSLGALDEEGLLTELGRKMAEFPLDPPLSKMLLASVDLGC 1000
+ PP ++ +A+E L +GALD++ LT LG+ ++ P++P L KML+ C
Sbjct: 746 LSRALQPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNC 805
Query: 1001 SDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPE-GDHLTLLAVYEAWK--AKNFS 1057
D ++T++A + + F P +K+ A+ R+KF + DHLTL+ Y WK + S
Sbjct: 806 LDPVMTVVAGLSVRDPFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTHS 865
Query: 1058 G-PWCFENFVQSRSLRRAQDVRKQLLTIMDKYKL-DVVSAGKNFTK----IRKAITAGFF 1111
G +C++NF+ S++L+ +RKQ ++ + L D + + +R I AG F
Sbjct: 866 GYDYCWKNFLSSQTLKAMDSMRKQFFNLLKEASLIDNIEGCSKLSHDEHLVRAIICAGMF 925
Query: 1112 FHAARKDPQEGYRTL--VENQPVYIHPSSALFQRQP----DWVIYHELVMTTKEYMREVT 1165
+E TL +E+ V ++ SS++ P W+++++ V ++R+ T
Sbjct: 926 PGVCSVVNKEKSITLKTMEDGQVLLY-SSSVNGNVPMIPFPWLVFNDKVKVNSVFLRDST 984
Query: 1166 VIDPKWLV 1173
+ L+
Sbjct: 985 AVSDSVLL 992
Score = 179 bits (455), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 133/203 (65%), Gaps = 8/203 (3%)
Query: 561 RQSLPIYKLKKELIQAVHDNQLLVVIGETGSGKTTQVTQYL----AEAGYTTRGKIGCTQ 616
R++LP YK K L++A+ NQ++VV GETG GKTTQ+ QY+ EA I CTQ
Sbjct: 296 RKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQ 355
Query: 617 PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDESLS 676
PRR++A+SV++RVA E G ++GE VGY +R E G DT + + T G+LLR +LVD SL
Sbjct: 356 PRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLK 415
Query: 677 QYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFYNCNIFRI 736
+ +++DE HER ++ D L +LK L+ RRP+L+LI+ SATL+AE FS YF I
Sbjct: 416 GVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHI 475
Query: 737 PGRTFPVEVLYTKQPESDYLDAS 759
PG T+PV + + DYL+ S
Sbjct: 476 PGFTYPVRAHFLE----DYLETS 494
>AT1G48650.2 | Symbols: | DEA(D/H)-box RNA helicase family protein |
chr1:17989517-17995169 REVERSE LENGTH=1206
Length = 1206
Score = 180 bits (457), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 136/488 (27%), Positives = 240/488 (49%), Gaps = 36/488 (7%)
Query: 705 KRRPELRLIVTSATLDAEKFSGYFYNCNIFRIPGRTFPVEVLYTKQPESDYLDASLITVL 764
K+R L L+A F GY + + L P+S + +LI +
Sbjct: 522 KKRKSLISSAVEDALEAADFKGYNFRTR-----------DSLSCWSPDS--IGFNLIENV 568
Query: 765 QIHLTEPE--GDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSR 822
H+ + E G +L+F+TG ++I+ + ++ E LG + ++++L + ++ S Q
Sbjct: 569 LCHIVKGERPGAVLVFMTGWDDIN-SLKNQLEAHSLLG-DPNKVLLLACHGSMASSEQRL 626
Query: 823 IFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPIXXXX 882
IFD P G RK+V+ATN+AE S+TI+ + YVID G AK+ Y+ L+ + I
Sbjct: 627 IFDRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAA 686
Query: 883 XXXXXXXXXXTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGTTTLNMKAMGINDLLSF 942
PG+CY LY Y + PE+ R L + L +K++G+ + F
Sbjct: 687 ARQRRGRAGRVMPGECYHLYPRCVYE-AFADYQQPELLRTPLQSLCLQIKSLGLGSISEF 745
Query: 943 --DFMDPPSPQALISAMEQLYSLGALDEEGLLTELGRKMAEFPLDPPLSKMLLASVDLGC 1000
+ PP ++ +A+E L +GALD++ LT LG+ ++ P++P L KML+ C
Sbjct: 746 LSRALQPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNC 805
Query: 1001 SDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPE-GDHLTLLAVYEAWK--AKNFS 1057
D ++T++A + + F P +K+ A+ R+KF + DHLTL+ Y WK + S
Sbjct: 806 LDPVMTVVAGLSVRDPFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTHS 865
Query: 1058 G-PWCFENFVQSRSLRRAQDVRKQLLTIMDKYKL-DVVSAGKNFTK----IRKAITAGFF 1111
G +C++NF+ S++L+ +RKQ ++ + L D + + +R I AG F
Sbjct: 866 GYDYCWKNFLSSQTLKAMDSMRKQFFNLLKEASLIDNIEGCSKLSHDEHLVRAIICAGMF 925
Query: 1112 FHAARKDPQEGYRTL--VENQPVYIHPSSALFQRQP----DWVIYHELVMTTKEYMREVT 1165
+E TL +E+ V ++ SS++ P W+++++ V ++R+ T
Sbjct: 926 PGVCSVVNKEKSITLKTMEDGQVLLY-SSSVNGNVPMIPFPWLVFNDKVKVNSVFLRDST 984
Query: 1166 VIDPKWLV 1173
+ L+
Sbjct: 985 AVSDSVLL 992
Score = 179 bits (455), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 133/203 (65%), Gaps = 8/203 (3%)
Query: 561 RQSLPIYKLKKELIQAVHDNQLLVVIGETGSGKTTQVTQYL----AEAGYTTRGKIGCTQ 616
R++LP YK K L++A+ NQ++VV GETG GKTTQ+ QY+ EA I CTQ
Sbjct: 296 RKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQ 355
Query: 617 PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDESLS 676
PRR++A+SV++RVA E G ++GE VGY +R E G DT + + T G+LLR +LVD SL
Sbjct: 356 PRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLK 415
Query: 677 QYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFYNCNIFRI 736
+ +++DE HER ++ D L +LK L+ RRP+L+LI+ SATL+AE FS YF I
Sbjct: 416 GVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHI 475
Query: 737 PGRTFPVEVLYTKQPESDYLDAS 759
PG T+PV + + DYL+ S
Sbjct: 476 PGFTYPVRAHFLE----DYLETS 494
>AT1G58060.1 | Symbols: | RNA helicase family protein |
chr1:21489480-21501775 REVERSE LENGTH=1459
Length = 1459
Score = 178 bits (452), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 142/490 (28%), Positives = 221/490 (45%), Gaps = 71/490 (14%)
Query: 749 KQPESDYLDASLITVLQIHL--TEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPEL 806
K+ D +D L+ L H+ T EG IL+FL G EI L + G L
Sbjct: 890 KRLNEDRIDYELLEELICHIDDTCEEGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWL 949
Query: 807 IILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNP 866
LP++S++ S Q ++F P G RKV+ ATNIAE S+TID + YVID G K+N YNP
Sbjct: 950 --LPLHSSIASSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNP 1007
Query: 867 KQGLDSLVITPIXXXXXXXXXXXXXXTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGT 926
++ L S+V I PG C+ LYT + M P +PE+ R+ L
Sbjct: 1008 QKKLSSMVEDWISQANARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVE 1067
Query: 927 TTLNMKAMGINDLLSF--DFMDPPSPQALISAMEQLYSLGALDEEGLLTELGRKMAEFPL 984
L +K +G+ + F ++PPS A+ SA+ L+ +GA++ + LT LG +A+ P+
Sbjct: 1068 LCLQIKLLGLGHIKPFLSRALEPPSEGAMTSAISLLHEVGAVEGDEELTPLGHHLAKLPV 1127
Query: 985 DPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEG----- 1039
D + KMLL GC IL+I A + + F P++++ D+ + G
Sbjct: 1128 DVLIGKMLLYGGIFGCLSPILSIAAFLSYKSPFIYPKDEKQNVDRVKLALLSDNGVSSSD 1187
Query: 1040 --------DHLTLLAVYEAW------KAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIM 1085
DHL ++ Y+ W + + +C F+ S +R +D+R Q T++
Sbjct: 1188 LNNNDRQSDHLLMMVAYDKWVKILQERGMKAAQRFCESKFLSSSVMRMIRDMRVQFGTLL 1247
Query: 1086 -----------------DKYKLDV----------------------VSAG--KNFTKIRK 1104
K LDV + AG N K
Sbjct: 1248 ADIGLINLPKTGEFSGRKKENLDVWFSDPTQPFNMYSQQPEVVKAILCAGLYPNIAANDK 1307
Query: 1105 AITAGFFFHAARKDPQ-EGYRTLVEN-QPVYIHPSS--ALFQR-QPDWVIYHELVMTTKE 1159
IT F ++ Q + Y + + V+IHPSS + F+ Q ++++ E V T K
Sbjct: 1308 GITETTFNSLTKQGNQTKSYSAWYDGRREVHIHPSSINSNFKAFQNPFLVFLEKVETNKV 1367
Query: 1160 YMREVTVIDP 1169
Y+R+ T++ P
Sbjct: 1368 YLRDTTIVSP 1377
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 126/205 (61%), Gaps = 16/205 (7%)
Query: 561 RQSLPIYKLKKELIQAVHDNQLLVVIGETGSGKTTQVTQY----LAEAGYTTRGKIGCTQ 616
R +LPI ++K ++Q + + +LVV GETGSGKTTQV Q+ + ++G+ I CTQ
Sbjct: 611 RTALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQ 670
Query: 617 PRRVAAMSVAKRVAEEFGCRLG-----EEVGYAIRFEDCTGPDTVIKYMTDGMLLREILV 671
PRR+AA+SVA+RVA+E C VGY +R E T + + T G+LLR++
Sbjct: 671 PRRIAAISVAQRVADE-RCESSPGLDDSLVGYQVRLESARSDKTRLLFCTTGILLRKLAG 729
Query: 672 DESLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRP------ELRLIVTSATLDAEKFS 725
D +L+ + I++DE HER++ D L +LK L++++ +L++I+ SAT+DA+ FS
Sbjct: 730 DRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKLKVILMSATVDADLFS 789
Query: 726 GYFYNCNIFRIPGRTFPVEVLYTKQ 750
YF +C + GRT PV + ++
Sbjct: 790 RYFGHCPVITAQGRTHPVTTHFLEE 814
>AT2G01130.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:88847-94635 REVERSE LENGTH=1113
Length = 1113
Score = 178 bits (451), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/238 (42%), Positives = 145/238 (60%), Gaps = 17/238 (7%)
Query: 510 EDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKLSIQEQRQSLPIYKL 569
E P+P + + L Q R + L + Y + GQR + + R SLP +K
Sbjct: 179 EQPLPISATKILWQ--RSLQLR-------DRQQYWQASVEGQR----MLDSRTSLPAFKQ 225
Query: 570 KKELIQAVHDNQLLVVIGETGSGKTTQVTQYLAEAGY-TTRG---KIGCTQPRRVAAMSV 625
+ ++ A+ NQ++V+ GETG GKTTQ+ Q++ E+ RG I CTQPRR++AMSV
Sbjct: 226 RHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFSSIICTQPRRISAMSV 285
Query: 626 AKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDESLSQYSVIMLDE 685
++RVA E G +LGE VGY +R E G DT + + T G+LLR +LVD +L + +++DE
Sbjct: 286 SERVAYERGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLLVDRNLRGVTHVIVDE 345
Query: 686 AHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFYNCNIFRIPGRTFPV 743
HER ++ D L +LK L+ RR EL+LI+ SATLDAE FS YF + IPG T+PV
Sbjct: 346 IHERGMNEDFLLIILKDLLSRRSELKLILMSATLDAELFSSYFGGAGVIYIPGFTYPV 403
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 218/440 (49%), Gaps = 25/440 (5%)
Query: 754 DYLDASLITVLQIHLTEPEG--DILLFLTGQEEIDFACQSLYERMK--GLGKNVPELIIL 809
D + +LI L ++ E EG IL+FLTG ++I SL E+++ + N +++L
Sbjct: 478 DCIGFNLIEFLLCNICENEGPGGILIFLTGWDDI----SSLKEKLQIHPIFGNPDLVMLL 533
Query: 810 PVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQG 869
+ ++ + Q IF+ G RK+V+ATNIAE S+TI+ + +VID G AK+ Y+
Sbjct: 534 ACHGSMETFEQRLIFEEPASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNN 593
Query: 870 LDSLVITPIXXXXXXXXXXXXXXTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGTTTL 929
L+ + I PG+CY LY + Y + + +PEI R L + L
Sbjct: 594 TPCLLPSWISKVSAQQRRGRAGRVRPGQCYHLYPKCVY-DAFAEYQLPEILRTPLHSLCL 652
Query: 930 NMKAMGINDLLSFDFMDPPSPQ--ALISAMEQLYSLGALDEEGLLTELGRKMAEFPLDPP 987
+K++ + + F SP+ A+ A+ L +GALDE LT LGR +++ P++P
Sbjct: 653 QIKSLNLGSISEFLSRALQSPELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPK 712
Query: 988 LSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAV 1047
L KML+ LGC D ILT+ A + + F P++K+ A+ +++F + DHL L+
Sbjct: 713 LGKMLILGAILGCLDPILTVAAGLSVRDPFLTPQDKKDLAEAAKSQFSRDHSDHLALVRA 772
Query: 1048 YEAWKAKNFSGP---WCFENFVQSRSLRRAQDVRKQLLTIM-DKYKLD-----VVSAGKN 1098
YE WK +C++NF+ +SLR +RK+ +++ D +D S G +
Sbjct: 773 YEGWKKAEEESAVYDYCWKNFLSIQSLRAIDSLRKEFFSLLKDTGLIDGNPSICNSEGND 832
Query: 1099 FTKIRKAITAGFF---FHAARKDPQEGYRTLVENQP-VYIHPSSALFQRQP-DWVIYHEL 1153
R I G + + +T+ + Q +Y + +A + P W++++E
Sbjct: 833 ANLTRAVICYGMYPGICSVVHNERSFSLKTMEDGQVLLYSNSENARETKIPYPWLVFNEK 892
Query: 1154 VMTTKEYMREVTVIDPKWLV 1173
+ ++R+ T L+
Sbjct: 893 IKVNSVFLRDSTACSDSTLI 912
>AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissue
and tapetum | chr2:13120585-13126635 REVERSE LENGTH=1299
Length = 1299
Score = 176 bits (447), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 131/198 (66%), Gaps = 8/198 (4%)
Query: 557 IQEQRQSLPIYKLKKELIQAVHDNQLLVVIGETGSGKTTQVTQYLAEAGYTTR---GKIG 613
I + R LPI K + AV NQ++++ GETG GKTTQV QYL + ++++ KI
Sbjct: 180 ITKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCKIV 239
Query: 614 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDE 673
CTQPRR++AMSV++R++ E G +GE +GY +R + G + + + T+G+LLR +LV +
Sbjct: 240 CTQPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLR-VLVGK 298
Query: 674 ----SLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFY 729
S+S + I++DE HER ++D + +++ L+ P LRLI+ SATLDAE+FSGYF
Sbjct: 299 GSVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSGYFG 358
Query: 730 NCNIFRIPGRTFPVEVLY 747
C + R+PG T+PV LY
Sbjct: 359 GCPVVRVPGFTYPVRTLY 376
Score = 164 bits (414), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 131/448 (29%), Positives = 210/448 (46%), Gaps = 43/448 (9%)
Query: 746 LYTKQPESDYLDASLITVL--QIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNV 803
+ T PE +D SLI L +I +G IL+FL G ++I+ Q L E +
Sbjct: 525 MATINPEQ--VDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLE--NPFFADS 580
Query: 804 PELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNV 863
+ I+ ++S +P+ Q ++F+ PPG RK+V+ATNIAE+++TID + YVID G K+
Sbjct: 581 AKFDIICLHSMVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKS 640
Query: 864 YNPKQGLDSLVITPIXXXXXXXXXXXXXXTGPGKCYRLYTESAYRNEMSPTSIPEIQRIN 923
Y+P + +L + + PG CY LY+ M +PEI+R+
Sbjct: 641 YDPYNNVSTLQSSWVSKANAKQRQGRAGRCQPGICYHLYSR-LRAASMPDFKVPEIKRMP 699
Query: 924 LGTTTLNMKAMG----INDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTELGRKM 979
+ L +K + ND L +DPP Q++ +A+ L +GAL + LTELG K
Sbjct: 700 VEELCLQVKILDPNCKTNDFLQ-KLLDPPVDQSIANALSILQDIGALTPQEELTELGEKF 758
Query: 980 AEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRP-----REKQAQADQKRAKF 1034
P+ P +SKML +V + C D LT+ F P R+K A A + A
Sbjct: 759 GHLPVHPLISKMLFFAVLVNCLDPALTLACAADYKEPFTMPMSPVERQKAAAAKLELASL 818
Query: 1035 FQPEGDHLTLLAVYEAW---KAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKL- 1090
+ DHL ++A +E W K + S +C + FV +++ +R QL + + ++ +
Sbjct: 819 CGGDSDHLAVVAAFECWKNAKGRGLSAEFCSQYFVSPSAMKMLDQMRSQLESELKRHGII 878
Query: 1091 --DVVSAGKNFTK---IRKAITAGFFFHAARKDPQEGY--RTLVENQP---VYIHPSSAL 1140
D+ S +N +R + G + R P G RT+VE V +H S
Sbjct: 879 PNDISSCSQNSRDPGILRAVLAVGLYPMVGRLCPAFGNNRRTIVETASGAKVRVHSLSNN 938
Query: 1141 FQRQPDWVIYHELVMTTKEYMREVTVID 1168
F +++K+Y + V D
Sbjct: 939 FN------------LSSKKYDESLLVFD 954
>AT5G04895.1 | Symbols: | DEA(D/H)-box RNA helicase family protein |
chr5:1428796-1434516 FORWARD LENGTH=1161
Length = 1161
Score = 173 bits (438), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 224/441 (50%), Gaps = 26/441 (5%)
Query: 754 DYLDASLITVLQIHLTEPE--GDILLFLTGQEEIDFACQSLYERMKG--LGKNVPELIIL 809
D + +LI + H+ E G +L+FLTG ++I +SL +++K L + +++L
Sbjct: 519 DCIGFNLIEAVLCHICRKERPGAVLVFLTGWDDI----RSLSDQIKAHPLLGDPNRVLLL 574
Query: 810 PVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQG 869
+ ++ + Q IF+ APP RK+V+ATN+AEAS+TI+ + +V+D G AK+ Y+
Sbjct: 575 MCHGSMATAEQRLIFERAPPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNN 634
Query: 870 LDSLVITPIXXXXXXXXXXXXXXTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGTTTL 929
L+ + I PG+CY LY + Y + + +PE+ R L + L
Sbjct: 635 TPCLLPSWISQASARQRRGRAGRLFPGECYHLYPKCVY-DAFAEYQLPELLRTPLNSLCL 693
Query: 930 NMKAMGINDLLSF--DFMDPPSPQALISAMEQLYSLGALDEEGLLTELGRKMAEFPLDPP 987
+K++ + + F + P A+ +A+ L +GALDE+ LT+LG+ ++ P+DP
Sbjct: 694 QIKSLQVESIAEFLSAALQAPESLAVQNAIGFLKMIGALDEKENLTDLGKLLSILPVDPK 753
Query: 988 LSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPE-GDHLTLLA 1046
L KML+ C D ILTI++ + + F P++K+ A + +F + DH+ L+
Sbjct: 754 LGKMLIMGAIFRCFDPILTIVSGLSVRDPFLLPQDKKDLALSAKLRFSAKDYSDHMALVR 813
Query: 1047 VYEAWKAKNFSGP---WCFENFVQSRSLRRAQDVRKQLLTIMDKYKL---DVVSAGK--- 1097
+E WK G +C+ NF+ +++L+ +RKQ I+ + L D+ K
Sbjct: 814 AFEGWKDAEREGSAYEFCWRNFLSAQTLQAIHSLRKQFNYILKEAGLVHDDLALNNKLSH 873
Query: 1098 NFTKIRKAITAGFFFHAA---RKDPQEGYRTLVENQ-PVYIHPSSALFQRQP-DWVIYHE 1152
N + +R I +G F A ++ ++T+ + Q +Y + ++ F P W+++ E
Sbjct: 874 NQSLVRAVICSGLFPGIASVVHRETSMSFKTMDDGQVSLYANSVNSRFPTIPYPWLVFGE 933
Query: 1153 LVMTTKEYMREVTVIDPKWLV 1173
V +R+ T + L+
Sbjct: 934 KVKVNAVLIRDSTGVPDSSLI 954
Score = 172 bits (436), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 136/214 (63%), Gaps = 14/214 (6%)
Query: 538 WKKDAYGKTITFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQLLVVIGETGSGKTTQV 597
W++ G+T+ E R++LP +K K+ L+QA+ NQ++VV GETG GKTTQ+
Sbjct: 244 WQESPEGRTML----------EFRKTLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQL 293
Query: 598 TQYL----AEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP 653
QY+ E+G I CTQPRR++AM+V++RV+ E G LGE VG+ +R E G
Sbjct: 294 PQYILESEIESGRGAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGK 353
Query: 654 DTVIKYMTDGMLLREILVDESLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLI 713
+T + + T G+LLR +L D +L+ + + +DE HER ++ D L +LK+L+ RRP+LRL+
Sbjct: 354 NTHLLFCTSGILLRRLLSDRNLNGVTHVFVDEIHERGMNEDFLIIVLKELLPRRPDLRLV 413
Query: 714 VTSATLDAEKFSGYFYNCNIFRIPGRTFPVEVLY 747
+ SATL+AE FS Y+ IPG T PV+ +
Sbjct: 414 LMSATLNAELFSNYYGGAPTIHIPGFTHPVKAHF 447
>AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase |
chr1:2040567-2047333 FORWARD LENGTH=1576
Length = 1576
Score = 167 bits (424), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 127/197 (64%), Gaps = 6/197 (3%)
Query: 557 IQEQRQSLPIYKLKKELIQAVHDNQLLVVIGETGSGKTTQVTQYLAEAGYTTR---GKIG 613
I E R LPI + +I AV NQ++++ GETG GKTTQV QYL + + ++ KI
Sbjct: 210 IFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKKEACKII 269
Query: 614 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL--- 670
CTQPRR++A+SV+ R++ E G +G VGY +R + G ++ + + T+G+LLR ++
Sbjct: 270 CTQPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLIGKG 329
Query: 671 VDESLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFYN 730
V+ S+ + I++DE HER ++D + +L+ L+ P LRLI+ SATLDAE+FS YF
Sbjct: 330 VNSSVPDITHIIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEYFGG 389
Query: 731 CNIFRIPGRTFPVEVLY 747
C + R+PG T+PV +
Sbjct: 390 CPVVRVPGFTYPVRTFF 406
Score = 160 bits (405), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 194/402 (48%), Gaps = 30/402 (7%)
Query: 746 LYTKQPESDYLDASLITVL--QIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNV 803
+ T +PE +D LI L +I +G IL+FL G EEI + L + +
Sbjct: 549 MATIKPEE--VDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDDR--FFAHS 604
Query: 804 PELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNV 863
+ IIL ++S +P+E Q ++F+ P G RK+V+ATNIAE+++TID + YVID G K+
Sbjct: 605 AKFIILCLHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKS 664
Query: 864 YNPKQGLDSLVITPIXXXXXXXXXXXXXXTGPGKCYRLYTESAYRNEMSPT-SIPEIQRI 922
Y+P + +L + + G CY LY S R P +PE+ R+
Sbjct: 665 YDPYNDVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLY--SKLRAASLPEYRVPEVMRM 722
Query: 923 NLGTTTLNMKAM----GINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTELGRK 978
+ L +K + +ND L MDPP Q++ +A+ L +GAL E LTELG+K
Sbjct: 723 PVDELCLQVKMLDPNCNVNDFLQ-KLMDPPVAQSIENALIILKDIGALTPEEELTELGQK 781
Query: 979 MAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRP-----REKQAQADQKRAK 1033
+ P+ P +SKM+ ++ + C D L + + F P R+K A A + A
Sbjct: 782 FGQLPVHPRISKMIYFAILVNCLDPALILACAADEKDPFTMPLSPGDRKKAAAAKHELAS 841
Query: 1034 FFQPEGDHLTLLAVYEAWKAKNFSG---PWCFENFVQSRSLRRAQDVRKQLLTIMDKYKL 1090
+ DHL +A ++ WK SG +C + F+ ++R D+ ++L ++++ +
Sbjct: 842 LYGDHSDHLATVAAFQCWKNAKASGQAKEFCSKYFISQVVMKRLDDLCRKLQGELNRHGV 901
Query: 1091 DVVSAGKNFTK-------IRKAITAGFFFHAARKDPQEGYRT 1125
+ S+ N + +R I G + R P RT
Sbjct: 902 -IPSSSSNCSLNAHDPGILRAVIAVGLYPMLGRMCPLSKNRT 942
>AT1G58050.1 | Symbols: | RNA helicase family protein |
chr1:21478590-21487839 REVERSE LENGTH=1417
Length = 1417
Score = 159 bits (402), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 174/368 (47%), Gaps = 25/368 (6%)
Query: 753 SDYLDASLITVLQIHL--TEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILP 810
S +D L+ L H+ T EG IL+FL G EI+ L + G + L LP
Sbjct: 861 SAVVDYDLLEELICHIDDTCEEGAILVFLPGMSEINMLLNRLAASYRFRGASGDWL--LP 918
Query: 811 VYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGL 870
++S++ S Q ++F P G RKV++ATNIAE S+TI+ + YVID G K+N YNP + L
Sbjct: 919 LHSSIASTEQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKL 978
Query: 871 DSLVITPIXXXXXXXXXXXXXXTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGTTTLN 930
S+V + PG C+ LYT + M P +PE+ R+ L L+
Sbjct: 979 SSMVEDWVSKANARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLH 1038
Query: 931 MKAMGINDLLSF--DFMDPPSPQALISAMEQLYSLGALDEEGLLTELGRKMAEFPLDPPL 988
+K +G+ + F ++PPS A+ SA+ L+ +GAL+ + LT LG +A+ P+D +
Sbjct: 1039 IKLLGLGQIKPFLSKALEPPSESAINSAILLLHKVGALEGDEELTPLGHHLAKLPVDLLI 1098
Query: 989 SKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQP----------- 1037
KMLL GC IL+I A + + + + D+ +
Sbjct: 1099 GKMLLYGGIFGCLSPILSIAAFLSCCKSPFVYAKDEQNVDRVKLALLSDKLESSSNLNNN 1158
Query: 1038 --EGDHLTLLAVYEAW----KAKNFSGP--WCFENFVQSRSLRRAQDVRKQLLTIMDKYK 1089
+ DHL ++ YE W + F +C F+ S +R ++ R + ++
Sbjct: 1159 DRQSDHLLMVVAYEKWVRILHEQGFKAAESFCESKFLNSSVMRMMRERRVEFGMLLADIG 1218
Query: 1090 LDVVSAGK 1097
L + GK
Sbjct: 1219 LINLPKGK 1226
Score = 136 bits (343), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 123/202 (60%), Gaps = 19/202 (9%)
Query: 561 RQSLPIYKLKKELIQAVHDNQLLVVIGETGSGKTTQVTQY----LAEAGYTTRGKIGCTQ 616
R +LPI ++KK+++Q + + +LVV GETGSGKTTQV Q+ + ++G+ I CTQ
Sbjct: 594 RAALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQ 653
Query: 617 PRRVAAMSVAKRVAEEFGCRL-----GEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILV 671
PR A++VA+RVA+E C V Y +R ++ T + + T G+LLR+++
Sbjct: 654 PR---AITVAQRVADE-RCEPPPGFDNSVVAYQVRHQNARSDKTRLLFCTTGILLRKLVG 709
Query: 672 DESLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRR------PELRLIVTSATLDAEKFS 725
D +L + I++DE HER++ D L +LK L++++ P+L++I+ SAT+DA +FS
Sbjct: 710 DTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNALPKLKVILMSATVDAHQFS 769
Query: 726 GYFYNCNIFRIPGRTFPVEVLY 747
YF C I GRT PV +
Sbjct: 770 RYFGQCPIITAQGRTHPVTTYF 791
>AT2G47680.1 | Symbols: | zinc finger (CCCH type) helicase family
protein | chr2:19545828-19550871 REVERSE LENGTH=1015
Length = 1015
Score = 141 bits (356), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 148/496 (29%), Positives = 235/496 (47%), Gaps = 82/496 (16%)
Query: 563 SLPIYKLKKELIQAVHDNQLLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAA 622
SLPI +K+ +I + +N++ +++GE G GK++QV Q+L EA I CTQPRR A
Sbjct: 25 SLPIMAMKRRIIDKILENRVTLIVGEPGCGKSSQVPQFLLEANM---APILCTQPRRFAV 81
Query: 623 MSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDESLS--QYSV 680
++VAK VA+ LG E+GY I + I + T G+LL E+L D+ L+ +Y V
Sbjct: 82 VAVAKMVAKSRNSDLGGEIGYHIGHSKILTEGSKILFKTAGVLLDEML-DKGLNALKYKV 140
Query: 681 IMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFYN------CNIF 734
I+LDE HER++ +D++ +KQ + + +LR+++ SAT D ++ YF +
Sbjct: 141 IILDEVHERSVESDLVLVCVKQFLMKNNDLRVVLMSATADITRYRDYFKELGRGERVEVV 200
Query: 735 RIPG---RT-FPVEVLYTKQ----------------------------PESDYLDASLIT 762
IP RT F VLY +Q PE L LI
Sbjct: 201 AIPSPDQRTIFQRRVLYLEQVAGLLGVSSDLSAYCPGPSPSSADTEIKPELQNLIHDLI- 259
Query: 763 VLQIHLTEP--EGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQ 820
L IH EP E IL+FL ++ + Y +++ P +++ +
Sbjct: 260 -LYIHEKEPDIEKSILVFLPTY----YSLEQQYHQLE------------PFFASFEVHIL 302
Query: 821 SRIFDPAPP--------GKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDS 872
R D +RKV++ATNIAE+S+TI + YVID + Q ++P + D+
Sbjct: 303 HRSIDTEQALAAMKICRSRRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDPSRKRDA 362
Query: 873 LVITPIXXXXXXXXXXXXXXTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGTTTLNM- 931
+ + + T G+ YRL SA+ N++ P I +++L L++
Sbjct: 363 VQLVWVSRSQAEQRRGRTGRTCDGEVYRL-VPSAFFNKLEEHEPPSILKLSLRQQVLHIC 421
Query: 932 --KAMGIND--LLSFDFMDPPSPQALISAMEQLYSLGALDEEGL----LTELGRKMAEFP 983
++ IND L MDPP P + A+ L S+ AL + T GR +A FP
Sbjct: 422 CTESRAINDANALLAKAMDPPDPDVVDDALRMLLSIQALRKSPRGRYEPTFYGRLLASFP 481
Query: 984 LDPPLSKMLLASVDLG 999
L S +++ ++G
Sbjct: 482 LSFDASILVVKFGEMG 497