Miyakogusa Predicted Gene
- Lj0g3v0250219.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0250219.1 Non Chatacterized Hit- tr|I1MC57|I1MC57_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53831
PE,89.55,0,coiled-coil,NULL; S-adenosyl-L-methionine-dependent
methyltransferases,NULL; seg,NULL; FAMILY NOT NA,CUFF.16376.1
(419 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G27230.1 | Symbols: | S-adenosyl-L-methionine-dependent meth... 613 e-176
AT5G40830.2 | Symbols: | S-adenosyl-L-methionine-dependent meth... 587 e-168
AT5G40830.1 | Symbols: | S-adenosyl-L-methionine-dependent meth... 587 e-168
AT3G05390.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 239 4e-63
AT4G01240.1 | Symbols: | S-adenosyl-L-methionine-dependent meth... 228 5e-60
AT1G29790.2 | Symbols: | S-adenosyl-L-methionine-dependent meth... 199 4e-51
AT1G29790.1 | Symbols: | S-adenosyl-L-methionine-dependent meth... 199 4e-51
>AT3G27230.1 | Symbols: | S-adenosyl-L-methionine-dependent
methyltransferases superfamily protein |
chr3:10054224-10055456 FORWARD LENGTH=410
Length = 410
Score = 613 bits (1582), Expect = e-176, Method: Compositional matrix adjust.
Identities = 300/419 (71%), Positives = 345/419 (82%), Gaps = 9/419 (2%)
Query: 1 MGSVSLKIGDGTARFKRATLCSSAVNILMIFSVITTNLFALYAFTASPKPNHQLLHHAHK 60
MGSVSLKIGDGTARF+R ++CSSAVN+LM+FSV+TTNLFALYAF++ + N LLH ++
Sbjct: 1 MGSVSLKIGDGTARFRRTSICSSAVNLLMLFSVVTTNLFALYAFSSHSQANSPLLHSSN- 59
Query: 61 NISIISEQVSLILREIDLSQKQLAQMEKELLGYESIDLSRPNIANELKIFLQRHQLPLGK 120
NIS++S+ +SLILREID SQ++LAQMEK++LGYESID+SRPNI ELK+FLQRHQLPLGK
Sbjct: 60 NISLVSQHLSLILREIDSSQRKLAQMEKQMLGYESIDISRPNIVPELKLFLQRHQLPLGK 119
Query: 121 DSRTGITEMVPSVGHSCEKSSDLLSQYMSYKASGSCPDDWSLAQKLILRGCEPLPRRRCF 180
DSRTGITEMV SVGHSC KS+DLLSQYMSYK CPDDWSL QKLILR CEPLPRRRC
Sbjct: 120 DSRTGITEMVSSVGHSCGKSTDLLSQYMSYKVFDRCPDDWSLGQKLILRACEPLPRRRCL 179
Query: 181 SKTVSKVGLSPFPDSLWINVGNKTVNWSGLNCKNFECLNGKKLSRDCIGCFDLVSSNENQ 240
+KTV K LS PDSLW +V NK+VNWSGL CK+F+CL GKKLS++C+GCFDL E
Sbjct: 180 AKTVQKQDLSKSPDSLWRSVSNKSVNWSGLGCKSFDCLKGKKLSKECVGCFDL--GVEKD 237
Query: 241 RFVKGKSKNDFVVDDVLALXXXXXXXXXXXXXXXXXFAARMADRNVTVVTNTLNIDAPFS 300
RFVK K KNDF++DDVL L FAARMA++NVTV+TNTLN APFS
Sbjct: 238 RFVKVKGKNDFLIDDVLGLGSGKIRIGFDISGGSGTFAARMAEKNVTVITNTLNNGAPFS 297
Query: 301 EFIAARGLFPLYLSLDHRFPFYDNVFDLIHASSALDVGGKPEKLEFLMFDIDRVLRAGGL 360
EFIAARGLFPL+LSLDHRFPF DNVFDLIHASS LDV GK EKLEFLMFD+DRVL+ GL
Sbjct: 298 EFIAARGLFPLFLSLDHRFPFLDNVFDLIHASSGLDVEGKAEKLEFLMFDLDRVLKPRGL 357
Query: 361 LWLDNFFCANEEKKQALTRLIEKFGYKKLKWVVGEKVDSFGSGKPQVVLSAVLQKPVRA 419
WLDNF+CAN+EKK+ LTR+IE+FGYKKLKWV+GEK D+ QV LSAVLQKPVRA
Sbjct: 358 FWLDNFYCANDEKKKELTRMIERFGYKKLKWVIGEKADA------QVYLSAVLQKPVRA 410
>AT5G40830.2 | Symbols: | S-adenosyl-L-methionine-dependent
methyltransferases superfamily protein |
chr5:16354611-16355855 REVERSE LENGTH=414
Length = 414
Score = 587 bits (1514), Expect = e-168, Method: Compositional matrix adjust.
Identities = 285/425 (67%), Positives = 335/425 (78%), Gaps = 19/425 (4%)
Query: 1 MGSVSLKIGDGTARFKRATLCSSAVNILMIFSVITTNLFALYAFTA-----SPKPNHQLL 55
MGSVSLKIGDGTARFKR+TL SSA+N+LM+FS++TTNLFALYAF++ +P P H
Sbjct: 1 MGSVSLKIGDGTARFKRSTLFSSAINLLMLFSIVTTNLFALYAFSSRSQSHTPHPLHS-- 58
Query: 56 HHAHKNISIISEQVSLILREIDLSQKQLAQMEKELLGYESIDLSRPNIANELKIFLQRHQ 115
N+S++S+ +SLILREID S L QMEK+++GYES+DLS+ + ELK+FLQ+HQ
Sbjct: 59 ----NNVSLVSQHLSLILREIDSSHHTLTQMEKQIIGYESLDLSQQEVPQELKLFLQQHQ 114
Query: 116 LPLGKDSRTGITEMVPSVGHSCEKSSDLLSQYMSYKASGSCPDDWSLAQKLILRGCEPLP 175
LPLGKDSRTGIT+MV SVGHSCE S DLLSQYMSY CPDDWSLAQKLILR CEPLP
Sbjct: 115 LPLGKDSRTGITQMVASVGHSCEMSLDLLSQYMSYNVFEKCPDDWSLAQKLILRACEPLP 174
Query: 176 RRRCFSKTVSKVGLSPFPDSLWINVGNKTVNWSGLNCKNFECLNGKKLSRDCIGCFDLVS 235
RRRC +KTV K GL+ FPDSLW VGN +VNWSGL CK+FECL GKKLSRDC+GCFDL +
Sbjct: 175 RRRCLAKTVHKPGLALFPDSLWRPVGNSSVNWSGLGCKSFECLKGKKLSRDCVGCFDLAT 234
Query: 236 SNENQRFVKGKSKNDFVVDDVLALXXXXXXXXXXXXXXXXXFAARMADRNVTVVTNTLNI 295
S+E RFVK K DF++DDVL L FAARMA++NV +++NTLNI
Sbjct: 235 SHEKDRFVKVNGKTDFLIDDVLDLGDGKIRIGFDISSGSGTFAARMAEKNVNIISNTLNI 294
Query: 296 DAPFSEFIAARGLFPLYLSLDHRFPFYDNVFDLIHASSALD--VGGKPEKLEFLMFDIDR 353
DAPFSEFIAARG+FPL++SLD R PFYDNVFDLIHAS+ LD V KPEKLEFLMFD+DR
Sbjct: 295 DAPFSEFIAARGIFPLFMSLDQRLPFYDNVFDLIHASNGLDLAVSNKPEKLEFLMFDLDR 354
Query: 354 VLRAGGLLWLDNFFCANEEKKQALTRLIEKFGYKKLKWVVGEKVDSFGSGKPQVVLSAVL 413
+L+ GGL WLDNF+C N+EKK+ LTRLIE+FGYKKLKWVVGEK D+ +V LSAVL
Sbjct: 355 ILKPGGLFWLDNFYCGNDEKKRVLTRLIERFGYKKLKWVVGEKTDA------EVFLSAVL 408
Query: 414 QKPVR 418
QKP R
Sbjct: 409 QKPAR 413
>AT5G40830.1 | Symbols: | S-adenosyl-L-methionine-dependent
methyltransferases superfamily protein |
chr5:16354611-16355855 REVERSE LENGTH=414
Length = 414
Score = 587 bits (1514), Expect = e-168, Method: Compositional matrix adjust.
Identities = 285/425 (67%), Positives = 335/425 (78%), Gaps = 19/425 (4%)
Query: 1 MGSVSLKIGDGTARFKRATLCSSAVNILMIFSVITTNLFALYAFTA-----SPKPNHQLL 55
MGSVSLKIGDGTARFKR+TL SSA+N+LM+FS++TTNLFALYAF++ +P P H
Sbjct: 1 MGSVSLKIGDGTARFKRSTLFSSAINLLMLFSIVTTNLFALYAFSSRSQSHTPHPLHS-- 58
Query: 56 HHAHKNISIISEQVSLILREIDLSQKQLAQMEKELLGYESIDLSRPNIANELKIFLQRHQ 115
N+S++S+ +SLILREID S L QMEK+++GYES+DLS+ + ELK+FLQ+HQ
Sbjct: 59 ----NNVSLVSQHLSLILREIDSSHHTLTQMEKQIIGYESLDLSQQEVPQELKLFLQQHQ 114
Query: 116 LPLGKDSRTGITEMVPSVGHSCEKSSDLLSQYMSYKASGSCPDDWSLAQKLILRGCEPLP 175
LPLGKDSRTGIT+MV SVGHSCE S DLLSQYMSY CPDDWSLAQKLILR CEPLP
Sbjct: 115 LPLGKDSRTGITQMVASVGHSCEMSLDLLSQYMSYNVFEKCPDDWSLAQKLILRACEPLP 174
Query: 176 RRRCFSKTVSKVGLSPFPDSLWINVGNKTVNWSGLNCKNFECLNGKKLSRDCIGCFDLVS 235
RRRC +KTV K GL+ FPDSLW VGN +VNWSGL CK+FECL GKKLSRDC+GCFDL +
Sbjct: 175 RRRCLAKTVHKPGLALFPDSLWRPVGNSSVNWSGLGCKSFECLKGKKLSRDCVGCFDLAT 234
Query: 236 SNENQRFVKGKSKNDFVVDDVLALXXXXXXXXXXXXXXXXXFAARMADRNVTVVTNTLNI 295
S+E RFVK K DF++DDVL L FAARMA++NV +++NTLNI
Sbjct: 235 SHEKDRFVKVNGKTDFLIDDVLDLGDGKIRIGFDISSGSGTFAARMAEKNVNIISNTLNI 294
Query: 296 DAPFSEFIAARGLFPLYLSLDHRFPFYDNVFDLIHASSALD--VGGKPEKLEFLMFDIDR 353
DAPFSEFIAARG+FPL++SLD R PFYDNVFDLIHAS+ LD V KPEKLEFLMFD+DR
Sbjct: 295 DAPFSEFIAARGIFPLFMSLDQRLPFYDNVFDLIHASNGLDLAVSNKPEKLEFLMFDLDR 354
Query: 354 VLRAGGLLWLDNFFCANEEKKQALTRLIEKFGYKKLKWVVGEKVDSFGSGKPQVVLSAVL 413
+L+ GGL WLDNF+C N+EKK+ LTRLIE+FGYKKLKWVVGEK D+ +V LSAVL
Sbjct: 355 ILKPGGLFWLDNFYCGNDEKKRVLTRLIERFGYKKLKWVVGEKTDA------EVFLSAVL 408
Query: 414 QKPVR 418
QKP R
Sbjct: 409 QKPAR 413
>AT3G05390.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 15 plant structures;
EXPRESSED DURING: 7 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF248,
methyltransferase putative (InterPro:IPR004159); BEST
Arabidopsis thaliana protein match is:
S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein (TAIR:AT4G01240.1); Has 507 Blast
hits to 498 proteins in 33 species: Archae - 4; Bacteria
- 8; Metazoa - 0; Fungi - 0; Plants - 493; Viruses - 0;
Other Eukaryotes - 2 (source: NCBI BLink). |
chr3:1546585-1547976 REVERSE LENGTH=463
Length = 463
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 126/323 (39%), Positives = 184/323 (56%), Gaps = 16/323 (4%)
Query: 103 IANELKIFLQRHQLPLGKDSRTGITEMVPSVGHSCEKSSDLLSQYMSYKASGSCPDDWSL 162
+ E++ ++ + +GK + G + ++GH+C L +YM Y C DDW+L
Sbjct: 150 LIEEIRQYITPKENRVGKINMFGTERVYNTIGHACALMKMELEKYMDYDVGAYCDDDWNL 209
Query: 163 AQKLILRGCEPLPRRRCFSKTVSKVGLSPFP--DSLWINVGNKTVNWSGLNCKNFECLNG 220
AQKL+L GC+PLPRRRC ++ S P+P +SLW ++ V W C+NF CL+
Sbjct: 210 AQKLMLNGCDPLPRRRCLTRA-SMTYQKPYPINESLWKLPDDRNVRWGNYQCRNFACLSS 268
Query: 221 KKLSR---DCIGCFDLVSSNENQRFVKGKSK-NDFVVDDVLALXXXXXXXXXXXXXXXXX 276
K R C GCF++ E ++VK S DF+++DVL +
Sbjct: 269 KNPKRGYTKCSGCFEM--EKEKDKWVKNSSLLVDFMIEDVLRVKPSEIRIGLDYGVGTGT 326
Query: 277 FAARMADRNVTVVTNTLNIDAPFSEFIAARGLFPLYLSLDHRFPFYDNVFDLIHASSALD 336
FAARM ++NVT+VT LN+ APF+E IA RGL PLY+SL+ R PF+DN D+IH + +D
Sbjct: 327 FAARMREKNVTIVTTALNLGAPFNEMIALRGLIPLYISLNQRLPFFDNTMDMIHTTGLMD 386
Query: 337 VGGKPEKLEFLMFDIDRVLRAGGLLWLDNFFCANEEKKQALTRLIEKFGYKKLKWVVGEK 396
++F+++D DRVLR GGLLW+D FFC ++ + ++ F YKK KW + K
Sbjct: 387 GWIDLLLMDFVLYDWDRVLRPGGLLWIDRFFCKKKDLDDYMYMFLQ-FRYKKHKWAISPK 445
Query: 397 VDSFGSGKPQVVLSAVLQKPVRA 419
K +V LSA+L+KP RA
Sbjct: 446 ------SKDEVYLSALLEKPPRA 462
>AT4G01240.1 | Symbols: | S-adenosyl-L-methionine-dependent
methyltransferases superfamily protein |
chr4:517795-521972 REVERSE LENGTH=659
Length = 659
Score = 228 bits (582), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 127/328 (38%), Positives = 176/328 (53%), Gaps = 17/328 (5%)
Query: 103 IANELKIFLQRHQLPLGKDSRTGITEMVPSVGHSCEKSSDLLSQYMSYKASGSCPDDWSL 162
+ E+K +++ LGK + G S+GH+C L +YM Y C DDW L
Sbjct: 334 MREEIKKYIKIKPNRLGKQNFMGANGTFTSIGHACFAMKKDLEEYMDYDVGEICNDDWRL 393
Query: 163 AQKLILRGCEPLPRRRCFSKTVSKVGLSPFP--DSLWINVGNKTVNWSGLNCKNFECLNG 220
AQKL++ GC+PLPRRRCFS+ ++ PFP +SLW N+ V W CKNF CL
Sbjct: 394 AQKLMVHGCDPLPRRRCFSRG-PQLYHKPFPINESLWKLPDNRNVRWGQYKCKNFACLAS 452
Query: 221 KKLSRD----CIGCFDLVSSNENQRFVKGK------SKNDFVVDDVLALXXXXXXXXXXX 270
+R C CF+L + +G+ DF + +VL +
Sbjct: 453 NTTARKGFFKCTDCFNLTHHESPRWLNRGEIDPETNQTADFSIAEVLEIKPGEIRIGLDF 512
Query: 271 XXXXXXFAARMADRNVTVVTNTLNIDAPFSEFIAARGLFPLYLSLDHRFPFYDNVFDLIH 330
FAARM ++NVT+V+ T+N+ APF+E IA RGL PLYL+++ R PF+D+ D+IH
Sbjct: 513 SIGTGTFAARMREQNVTIVSATINLGAPFNEMIALRGLVPLYLTVNQRLPFFDSTLDMIH 572
Query: 331 ASSALDVGGKPEKLEFLMFDIDRVLRAGGLLWLDNFFCANEEKKQALTRLIEKFGYKKLK 390
+ LD L+F++FD DRVLR GGLLW+D FFC E+ + + Y+K K
Sbjct: 573 TTRFLDGWIDLILLDFVLFDWDRVLRPGGLLWIDGFFCLKEDVSDYM-EAFKALRYRKHK 631
Query: 391 WVVGEKVDSFGSGKPQVVLSAVLQKPVR 418
WVV K D +V SAVL+KP R
Sbjct: 632 WVVVPKKD---KDDKEVFFSAVLEKPPR 656
>AT1G29790.2 | Symbols: | S-adenosyl-L-methionine-dependent
methyltransferases superfamily protein |
chr1:10430025-10431161 FORWARD LENGTH=378
Length = 378
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 152/288 (52%), Gaps = 19/288 (6%)
Query: 133 VGHSCEKSSDLLSQYMSYKASGSCPDDWSLAQKLILRGCEPLPRRRCFSKTVSKVGLSPF 192
+ +C DLL +YM+Y CP D L +KLILRGC PLPRRRCFS+T S
Sbjct: 105 IASACHNYPDLLHEYMNYTPFSLCPSDTDLVEKLILRGCHPLPRRRCFSRTPRNPSDSK- 163
Query: 193 PDSLWINVGNKTVNWSGLNCKNFECLNGKKLSRDCIGCFDLVSSNENQRFVKGKSKNDFV 252
P+S V WS +CK+F+CL +++ FDL +F KS+ D
Sbjct: 164 PES--------NVLWSYYSCKSFDCL----ITKFSDLGFDLSLEKSKSQFSAYKSELDLP 211
Query: 253 VDDVLALXXXXXXXXXXXXXX---XXXFAARMADRNVTVVTNTLNIDAPFSEFIAARGLF 309
+ +L + FAA M RNVTV+T T+N +AP+SE +A RGL
Sbjct: 212 ISQLLQIAKSANSVLRLGIDVGGGTGSFAAAMKARNVTVLTTTMNFNAPYSEAVAMRGLV 271
Query: 310 PLYLSLDHRFPFYDNVFDLIHASSALDVGGKPEKLEFLMFDIDRVLRAGGLLWLDNFFCA 369
PL++ L R P +D V DL+ A++ +EF FD+DR+LR GG LWLD FF
Sbjct: 272 PLHVPLQQRLPVFDGVVDLVRCGRAVNRWIPVTVMEFFFFDLDRILRGGGYLWLDRFFSK 331
Query: 370 NEEKKQALTRLIEKFGYKKLKWVVGEKVDSFGSGKPQVVLSAVLQKPV 417
+ + +I K GYKK+KW V K D S +V L+A+LQKPV
Sbjct: 332 KVDLENVYAPMIGKLGYKKVKWAVANKAD---SKHGEVFLTALLQKPV 376
>AT1G29790.1 | Symbols: | S-adenosyl-L-methionine-dependent
methyltransferases superfamily protein |
chr1:10430025-10431161 FORWARD LENGTH=378
Length = 378
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 152/288 (52%), Gaps = 19/288 (6%)
Query: 133 VGHSCEKSSDLLSQYMSYKASGSCPDDWSLAQKLILRGCEPLPRRRCFSKTVSKVGLSPF 192
+ +C DLL +YM+Y CP D L +KLILRGC PLPRRRCFS+T S
Sbjct: 105 IASACHNYPDLLHEYMNYTPFSLCPSDTDLVEKLILRGCHPLPRRRCFSRTPRNPSDSK- 163
Query: 193 PDSLWINVGNKTVNWSGLNCKNFECLNGKKLSRDCIGCFDLVSSNENQRFVKGKSKNDFV 252
P+S V WS +CK+F+CL +++ FDL +F KS+ D
Sbjct: 164 PES--------NVLWSYYSCKSFDCL----ITKFSDLGFDLSLEKSKSQFSAYKSELDLP 211
Query: 253 VDDVLALXXXXXXXXXXXXXX---XXXFAARMADRNVTVVTNTLNIDAPFSEFIAARGLF 309
+ +L + FAA M RNVTV+T T+N +AP+SE +A RGL
Sbjct: 212 ISQLLQIAKSANSVLRLGIDVGGGTGSFAAAMKARNVTVLTTTMNFNAPYSEAVAMRGLV 271
Query: 310 PLYLSLDHRFPFYDNVFDLIHASSALDVGGKPEKLEFLMFDIDRVLRAGGLLWLDNFFCA 369
PL++ L R P +D V DL+ A++ +EF FD+DR+LR GG LWLD FF
Sbjct: 272 PLHVPLQQRLPVFDGVVDLVRCGRAVNRWIPVTVMEFFFFDLDRILRGGGYLWLDRFFSK 331
Query: 370 NEEKKQALTRLIEKFGYKKLKWVVGEKVDSFGSGKPQVVLSAVLQKPV 417
+ + +I K GYKK+KW V K D S +V L+A+LQKPV
Sbjct: 332 KVDLENVYAPMIGKLGYKKVKWAVANKAD---SKHGEVFLTALLQKPV 376