Miyakogusa Predicted Gene

Lj0g3v0249949.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0249949.1 Non Chatacterized Hit- tr|I1LK89|I1LK89_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,84.67,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; CCR4 NOT-RELATED,NULL;
NOT2_3_5,NOT2/NOT3/NOT5,CUFF.16416.1
         (659 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G07705.2 | Symbols:  | NOT2 / NOT3 / NOT5 family | chr1:23820...   675   0.0  
AT5G59710.1 | Symbols: VIP2, AtVIP2 | VIRE2 interacting protein ...   598   e-171
AT1G07705.1 | Symbols:  | NOT2 / NOT3 / NOT5 family | chr1:23820...   554   e-158
AT5G18230.1 | Symbols:  | transcription regulator NOT2/NOT3/NOT5...    57   4e-08
AT5G18230.2 | Symbols:  | transcription regulator NOT2/NOT3/NOT5...    57   5e-08

>AT1G07705.2 | Symbols:  | NOT2 / NOT3 / NOT5 family |
           chr1:2382090-2385856 FORWARD LENGTH=614
          Length = 614

 Score =  675 bits (1742), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/643 (56%), Positives = 426/643 (66%), Gaps = 57/643 (8%)

Query: 18  DGTGRSFATSFSGQSGVASPVFHHSGTIQGLHNIHGSFNVPNMPNTLTSRNLTIN--PTG 75
           DG+GR+F +SFSGQSG ASPVFHH+G+IQGLHNIHG+FNVPN+  +L SRN ++N  P+ 
Sbjct: 18  DGSGRTFTSSFSGQSGAASPVFHHAGSIQGLHNIHGNFNVPNLAGSLGSRNSSLNGVPSA 77

Query: 76  GVQQPTANLSSGRFASNNLPVALSQLXXXXXXXXXXXXXXXXISVVGNPGFNTSSNGVTG 135
           GVQQ   ++S+GRFAS+N+PVALSQ+                                  
Sbjct: 78  GVQQQNGSISNGRFASSNIPVALSQMSHGSSH---------------------------- 109

Query: 136 SIPGILPTSAAIGNRNAVPGLGVSPILGNAGSRITSSMGNMVXXXXXXXXXXXXXXXXXX 195
                    + + NR    GLGVSPILGN GSR+TSSMGNMV                  
Sbjct: 110 -------GHSGLTNRG---GLGVSPILGNVGSRMTSSMGNMVGGGTMGRTLSSGGGLSIP 159

Query: 196 XXXXXXXXXXXXXXXXXXXQNRLMSGVLPQGSPQVMSMLGNSYPSAGGQLSQSHVQALNN 255
                              QNR+M GVLPQGSPQV+SMLGNSYPSAGG LSQ+HVQA+N+
Sbjct: 160 SLGSRLNLAVNSGSGNIG-QNRMMGGVLPQGSPQVLSMLGNSYPSAGG-LSQNHVQAMNS 217

Query: 256 LNSMGMLNDLHSGDSSPFDIN-EFPQLTSRPXXXXXXXXXXXXXXXXXXXXXPIGQQNQE 314
           L+SMG+LND++S D+SPFDIN +FPQLTSRP                     PI QQNQE
Sbjct: 218 LSSMGLLNDMNSNDTSPFDINNDFPQLTSRPSSAGSQGQLGSRLKQGLGIS-PIVQQNQE 276

Query: 315 FRIESEDFPALPGYKGGSADFAMDMHQKEQLHDNPVSMMQSQHFPMGRSTGFSLGGXXXX 374
           F I++EDFPALPGYKG SAD+ MD+H KEQLH+N V MMQSQ   MGRS GF+LGG    
Sbjct: 277 FSIQNEDFPALPGYKGSSADYPMDLHHKEQLHENSVLMMQSQQLSMGRSGGFNLGGAYTS 336

Query: 375 XXXXXXXXXXXXXXXXXXXXXXXXXQDLLHLHGSDIFPSSHSTYHSQTSGPPGIGIRPPN 434
                                       + LHGSDIF SSH  YHSQT G PGIG+R  N
Sbjct: 337 HRPQQQQQHAQAVSSSG-----------VSLHGSDIFSSSHPPYHSQTGGAPGIGLRSMN 385

Query: 435 SPNTISGVGSYDXXXXXXXXXXXXXXXXXXXMSAANQSFRDQSMKSMQTVQSSPDPFGLL 494
           S N+I+G+G                      MSAA+Q FRD  +KSMQ+ QS+PD FGLL
Sbjct: 386 SANSITGMGYDQQLIQQYQHQQNSAQYRLQQMSAASQPFRDVGLKSMQSTQSNPDRFGLL 445

Query: 495 GLLSVIRMSDPDLTSLALGVDLTTLGLNLNSSENLHKTFASPWSDEPAKSDPEFTVLQCY 554
           GLLSVI+MSDPDLTSLALG+DLTTLGLNLNS+ENLHKTF SPWS+EP+K DPEF+V QCY
Sbjct: 446 GLLSVIKMSDPDLTSLALGIDLTTLGLNLNSTENLHKTFGSPWSNEPSKVDPEFSVPQCY 505

Query: 555 NAKQPPALHQGYFSKFSVETLFYIFYSMPRDEAQLYAAHELYKRGWFYHKEHRLWFIRVP 614
            AK PP LHQG F+K  VETLFY+FYSMP+DEAQLYAA+ELY RGWFYHKEHRLWFIR+ 
Sbjct: 506 YAKNPPPLHQGLFAKLLVETLFYVFYSMPKDEAQLYAANELYNRGWFYHKEHRLWFIRIG 565

Query: 615 NMEPLVKTNAYERGSYHCFDPSSFKTVQKDNFVLYYEMVEKRP 657
             EPLVKTNAYERGSYHCFDP+SF+ VQK+NFVLYYEM+EKRP
Sbjct: 566 --EPLVKTNAYERGSYHCFDPNSFEIVQKENFVLYYEMLEKRP 606


>AT5G59710.1 | Symbols: VIP2, AtVIP2 | VIRE2 interacting protein 2 |
           chr5:24058157-24061736 FORWARD LENGTH=614
          Length = 614

 Score =  598 bits (1543), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 337/644 (52%), Positives = 411/644 (63%), Gaps = 53/644 (8%)

Query: 17  PDGTGRSFATSFSGQSGVASPVFHHSGTIQGLHNIHGSFNVPNMPNTLTSRNLTIN--PT 74
           PDG+GRSF  S+SGQSG  SP FHH+G +QGLHNIHG++NV NM  TLTSRN ++N  P+
Sbjct: 16  PDGSGRSFTASYSGQSGAPSPSFHHTGNLQGLHNIHGNYNVGNMQGTLTSRNSSMNSIPS 75

Query: 75  GGVQQPTANLSSGRFASNNLPVALSQLXXXXXXXXXXXXXXXXISVVGNPGFNTSSNGVT 134
            GVQQP  + SSGRFASNNLPV LSQL                ++VVGNPGF++++NGV 
Sbjct: 76  AGVQQPNGSFSSGRFASNNLPVNLSQLSHGSSHGHSGIPNRG-LNVVGNPGFSSNANGVG 134

Query: 135 GSIPGILPTSAAIGNRNAVPGLGVSPILGNAGSRITSSMGNMVXXXXXXXXXXXXXXXXX 194
           GSIPGIL TSA + NRN+VPG+G+S +LGN+G RIT+SMGNMV                 
Sbjct: 135 GSIPGILSTSAGLSNRNSVPGMGISQLLGNSGPRITNSMGNMVGGGNLGRNISSGGLSIP 194

Query: 195 XXXXXXXXXXXXXXXXXXXXQNRLMSGVLPQGSPQVMSMLGNSYPSAGGQLSQSHVQALN 254
                               QNR+M GVLPQGS QVMSMLGNSY + GG LSQ+HVQ++N
Sbjct: 195 GLSSRLNLAANSGSGLNVQGQNRMMGGVLPQGS-QVMSMLGNSYHTGGGPLSQNHVQSVN 253

Query: 255 NLNSMGMLNDLHSGDSSPFDIN-EFPQLTSRPXXXXXXXXXXXXXXXXXXXXXPIGQQNQ 313
           N+    ML+D H  DSS FDIN +FPQLTSRP                     P+ QQNQ
Sbjct: 254 NM----MLSD-HPNDSSLFDINNDFPQLTSRPGSAGGTQGHLGSLRKQGLGV-PLVQQNQ 307

Query: 314 EFRIESEDFPALPGYKGGSADFAMDMHQKEQLHDNPVSMMQSQHFPMGRSTGFSLGGXXX 373
           EF I++EDFPALPGYKGG++++ MD+HQKEQLHDN +SMM SQ+F MGRS GF+LG    
Sbjct: 308 EFSIQNEDFPALPGYKGGNSEYPMDLHQKEQLHDNAMSMMHSQNFSMGRSGGFNLGATY- 366

Query: 374 XXXXXXXXXXXXXXXXXXXXXXXXXXQDLLHLHGSDIFPSSHSTYHSQTSGPPGIGIRPP 433
                                             S   P     + S T G  G+G+RP 
Sbjct: 367 ----------------------------------SSHRPQQQPQHTSSTGGLQGLGLRPL 392

Query: 434 NSPNTISGVGSYDXXXXXXXXXXXXXXXXXXXMSAANQSFRDQSMKSMQTVQSSPDPFGL 493
           +SPN +S +G YD                   MS+ NQ FRD  MKS    QS  DPF L
Sbjct: 393 SSPNAVSSIG-YDQLIQQYQQHQNQSQFPVQQMSSINQ-FRDSEMKS---TQSEADPFCL 447

Query: 494 LGLLSVIRMSDPDLTSLALGVDLTTLGLNLNSSENLHKTFASPWSDEPAKSDPEFTVLQC 553
           LGLL V+  S+P+LTSLALG+DLTTLGL+LNS+ NL+KTFASPW++EPAKS+ EFTV  C
Sbjct: 448 LGLLDVLNRSNPELTSLALGIDLTTLGLDLNSTGNLYKTFASPWTNEPAKSEVEFTVPNC 507

Query: 554 YNAKQPPALHQGYFSKFSVETLFYIFYSMPRDEAQLYAAHELYKRGWFYHKEHRLWFIRV 613
           Y A +PP L +  F +FS E LFY FYSMP+DEAQLYAA ELY+RGWFYHKE R+WF RV
Sbjct: 508 YYATEPPPLTRASFKRFSYELLFYTFYSMPKDEAQLYAADELYERGWFYHKELRVWFFRV 567

Query: 614 PNMEPLVKTNAYERGSYHCFDPSSFKTVQKDNFVLYYEMVEKRP 657
              EPLV+   YERG+Y   DP+SFKTV+K++FV+ YE++EKRP
Sbjct: 568 G--EPLVRAATYERGTYEYLDPNSFKTVRKEHFVIKYELMEKRP 609


>AT1G07705.1 | Symbols:  | NOT2 / NOT3 / NOT5 family |
           chr1:2382090-2385282 FORWARD LENGTH=546
          Length = 546

 Score =  554 bits (1428), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 313/581 (53%), Positives = 369/581 (63%), Gaps = 55/581 (9%)

Query: 18  DGTGRSFATSFSGQSGVASPVFHHSGTIQGLHNIHGSFNVPNMPNTLTSRNLTIN--PTG 75
           DG+GR+F +SFSGQSG ASPVFHH+G+IQGLHNIHG+FNVPN+  +L SRN ++N  P+ 
Sbjct: 18  DGSGRTFTSSFSGQSGAASPVFHHAGSIQGLHNIHGNFNVPNLAGSLGSRNSSLNGVPSA 77

Query: 76  GVQQPTANLSSGRFASNNLPVALSQLXXXXXXXXXXXXXXXXISVVGNPGFNTSSNGVTG 135
           GVQQ   ++S+GRFAS+N+PVALSQ+                                  
Sbjct: 78  GVQQQNGSISNGRFASSNIPVALSQMSHGSSH---------------------------- 109

Query: 136 SIPGILPTSAAIGNRNAVPGLGVSPILGNAGSRITSSMGNMVXXXXXXXXXXXXXXXXXX 195
                    + + NR    GLGVSPILGN GSR+TSSMGNMV                  
Sbjct: 110 -------GHSGLTNRG---GLGVSPILGNVGSRMTSSMGNMVGGGTMGRTLSSGGGLSIP 159

Query: 196 XXXXXXXXXXXXXXXXXXXQNRLMSGVLPQGSPQVMSMLGNSYPSAGGQLSQSHVQALNN 255
                              QNR+M GVLPQGSPQV+SMLGNSYPSAGG LSQ+HVQA+N+
Sbjct: 160 SLGSRLNLAVNSGSGNIG-QNRMMGGVLPQGSPQVLSMLGNSYPSAGG-LSQNHVQAMNS 217

Query: 256 LNSMGMLNDLHSGDSSPFDIN-EFPQLTSRPXXXXXXXXXXXXXXXXXXXXXPIGQQNQE 314
           L+SMG+LND++S D+SPFDIN +FPQLTSRP                     PI QQNQE
Sbjct: 218 LSSMGLLNDMNSNDTSPFDINNDFPQLTSRPSSAGSQGQLGSRLKQGLGIS-PIVQQNQE 276

Query: 315 FRIESEDFPALPGYKGGSADFAMDMHQKEQLHDNPVSMMQSQHFPMGRSTGFSLGGXXXX 374
           F I++EDFPALPGYKG SAD+ MD+H KEQLH+N V MMQSQ   MGRS GF+LGG    
Sbjct: 277 FSIQNEDFPALPGYKGSSADYPMDLHHKEQLHENSVLMMQSQQLSMGRSGGFNLGGAYTS 336

Query: 375 XXXXXXXXXXXXXXXXXXXXXXXXXQDLLHLHGSDIFPSSHSTYHSQTSGPPGIGIRPPN 434
                                       + LHGSDIF SSH  YHSQT G PGIG+R  N
Sbjct: 337 HRPQQQQQHAQAVSSSG-----------VSLHGSDIFSSSHPPYHSQTGGAPGIGLRSMN 385

Query: 435 SPNTISGVGSYDXXXXXXXXXXXXXXXXXXXMSAANQSFRDQSMKSMQTVQSSPDPFGLL 494
           S N+I+G+G                      MSAA+Q FRD  +KSMQ+ QS+PD FGLL
Sbjct: 386 SANSITGMGYDQQLIQQYQHQQNSAQYRLQQMSAASQPFRDVGLKSMQSTQSNPDRFGLL 445

Query: 495 GLLSVIRMSDPDLTSLALGVDLTTLGLNLNSSENLHKTFASPWSDEPAKSDPEFTVLQCY 554
           GLLSVI+MSDPDLTSLALG+DLTTLGLNLNS+ENLHKTF SPWS+EP+K DPEF+V QCY
Sbjct: 446 GLLSVIKMSDPDLTSLALGIDLTTLGLNLNSTENLHKTFGSPWSNEPSKVDPEFSVPQCY 505

Query: 555 NAKQPPALHQGYFSKFSVETLFYIFYSMPRDEAQLYAAHEL 595
            AK PP LHQG F+K  VETLFY+FYSMP+DEAQLYAA+EL
Sbjct: 506 YAKNPPPLHQGLFAKLLVETLFYVFYSMPKDEAQLYAANEL 546


>AT5G18230.1 | Symbols:  | transcription regulator NOT2/NOT3/NOT5
           family protein | chr5:6021610-6027031 REVERSE LENGTH=843
          Length = 843

 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 5/76 (6%)

Query: 570 FSVETLFYIFYSMPRDEAQLYAAHELYKRGWFYHKEHRLWFIRVPNMEPLVKTNAYERGS 629
           +  +TLF+ FY       Q  AA EL K+ W YH++   WF R  + EP + T+ YE+G+
Sbjct: 747 YGTDTLFFAFYYQQNSYQQYLAAKELKKQSWRYHRKFNTWFQR--HKEPKIATDEYEQGA 804

Query: 630 YHCFDPSSFKTVQKDN 645
           Y  FD   F+T + +N
Sbjct: 805 YVYFD---FQTPKDEN 817


>AT5G18230.2 | Symbols:  | transcription regulator NOT2/NOT3/NOT5
           family protein | chr5:6021610-6027031 REVERSE LENGTH=845
          Length = 845

 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 5/76 (6%)

Query: 570 FSVETLFYIFYSMPRDEAQLYAAHELYKRGWFYHKEHRLWFIRVPNMEPLVKTNAYERGS 629
           +  +TLF+ FY       Q  AA EL K+ W YH++   WF R  + EP + T+ YE+G+
Sbjct: 749 YGTDTLFFAFYYQQNSYQQYLAAKELKKQSWRYHRKFNTWFQR--HKEPKIATDEYEQGA 806

Query: 630 YHCFDPSSFKTVQKDN 645
           Y  FD   F+T + +N
Sbjct: 807 YVYFD---FQTPKDEN 819