Miyakogusa Predicted Gene
- Lj0g3v0249849.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0249849.1 Non Chatacterized Hit- tr|I1JVG7|I1JVG7_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,82.95,0,WD_REPEATS_1,WD40 repeat, conserved site; TolB,
C-terminal domain,NULL; WD_REPEATS_2,WD40 repeat; WD,gene.g19462.t1.1
(178 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G78070.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 297 2e-81
AT1G36070.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 273 5e-74
AT1G36070.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 273 5e-74
AT3G13340.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 247 3e-66
AT3G13340.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 247 3e-66
AT5G56190.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 245 1e-65
AT5G56190.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 245 1e-65
AT1G55680.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 241 1e-64
AT5G23430.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 66 1e-11
AT5G23430.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 66 1e-11
AT3G49660.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 65 3e-11
AT5G08390.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 64 5e-11
AT1G61210.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 58 3e-09
AT1G61210.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 58 3e-09
AT1G11160.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 58 4e-09
AT2G41500.1 | Symbols: LIS, EMB2776 | WD-40 repeat family protei... 53 1e-07
AT1G04510.2 | Symbols: MAC3A | MOS4-associated complex 3A | chr... 50 7e-07
AT1G04510.1 | Symbols: MAC3A | MOS4-associated complex 3A | chr... 50 7e-07
AT2G33340.2 | Symbols: MAC3B | MOS4-associated complex 3B | chr... 50 8e-07
AT2G33340.1 | Symbols: MAC3B | MOS4-associated complex 3B | chr... 50 8e-07
AT5G25150.1 | Symbols: TAF5 | TBP-associated factor 5 | chr5:867... 50 9e-07
AT2G33340.3 | Symbols: MAC3B | MOS4-associated complex 3B | chr... 50 9e-07
AT2G43770.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 50 1e-06
AT5G56130.1 | Symbols: TEX1, AtTEX1, THO3 | Transducin/WD40 repe... 49 1e-06
AT4G15900.1 | Symbols: PRL1 | pleiotropic regulatory locus 1 | c... 49 2e-06
AT5G16750.1 | Symbols: TOZ | Transducin family protein / WD-40 r... 49 2e-06
AT3G42660.1 | Symbols: | transducin family protein / WD-40 repe... 47 7e-06
AT3G16650.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 47 7e-06
>AT1G78070.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:29355219-29358368 FORWARD LENGTH=449
Length = 449
Score = 297 bits (761), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 136/166 (81%), Positives = 151/166 (90%)
Query: 13 NISASPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDT 72
NIS SPDGK +AVLGDS ECL+AD +GKV L+GHLDYSF+SAWHPNGQILATGNQDT
Sbjct: 284 NISTSPDGKLVAVLGDSPECLLADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDT 343
Query: 73 TCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEI 132
TCRLWD+RNLSQS+ VLKG MGAIRALRFTSDGRFLAMAEPADF+H+FD+ +GY QCQEI
Sbjct: 344 TCRLWDVRNLSQSLKVLKGNMGAIRALRFTSDGRFLAMAEPADFVHLFDTEAGYSQCQEI 403
Query: 133 DIFGEIAGVSFSPDTEALFVGVADRTYGSLLEFTRNRNHHYVDTMF 178
D+FGEIAG+SFSPDTEALFVGVADRTYGSLLEF R RNH YVD++F
Sbjct: 404 DLFGEIAGISFSPDTEALFVGVADRTYGSLLEFNRKRNHSYVDSIF 449
>AT1G36070.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:13467164-13470386 REVERSE LENGTH=418
Length = 418
Score = 273 bits (697), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 124/166 (74%), Positives = 146/166 (87%)
Query: 13 NISASPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDT 72
N S SPDGK LAV+GDSTECLI+D ++GKV SL+GH DYSFASAWHPNG ILATGNQDT
Sbjct: 253 NTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGNQDT 312
Query: 73 TCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEI 132
CRLWDIRN S+S AVLKG MGAIR L+FT +GRFLAMAEPADF+H+FD+ SG+ Q QEI
Sbjct: 313 ACRLWDIRNPSESFAVLKGNMGAIRGLKFTPEGRFLAMAEPADFVHIFDTQSGFLQSQEI 372
Query: 133 DIFGEIAGVSFSPDTEALFVGVADRTYGSLLEFTRNRNHHYVDTMF 178
D+FGEIAG+SFSPDTEAL+VGVADRTYGSLLE+ R +++HY+D+ +
Sbjct: 373 DLFGEIAGISFSPDTEALYVGVADRTYGSLLEYKRRKDNHYMDSFY 418
>AT1G36070.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:13467164-13470386 REVERSE LENGTH=417
Length = 417
Score = 273 bits (697), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 124/166 (74%), Positives = 146/166 (87%)
Query: 13 NISASPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDT 72
N S SPDGK LAV+GDSTECLI+D ++GKV SL+GH DYSFASAWHPNG ILATGNQDT
Sbjct: 252 NTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGNQDT 311
Query: 73 TCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEI 132
CRLWDIRN S+S AVLKG MGAIR L+FT +GRFLAMAEPADF+H+FD+ SG+ Q QEI
Sbjct: 312 ACRLWDIRNPSESFAVLKGNMGAIRGLKFTPEGRFLAMAEPADFVHIFDTQSGFLQSQEI 371
Query: 133 DIFGEIAGVSFSPDTEALFVGVADRTYGSLLEFTRNRNHHYVDTMF 178
D+FGEIAG+SFSPDTEAL+VGVADRTYGSLLE+ R +++HY+D+ +
Sbjct: 372 DLFGEIAGISFSPDTEALYVGVADRTYGSLLEYKRRKDNHYMDSFY 417
>AT3G13340.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:4332370-4334603 FORWARD LENGTH=447
Length = 447
Score = 247 bits (630), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 112/164 (68%), Positives = 137/164 (83%)
Query: 15 SASPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTC 74
S SPDGK LA++GD+ E LI D NTGK +L GHLD+SFASAWHP+G +TGNQD TC
Sbjct: 284 SLSPDGKLLAIVGDNPEGLIVDPNTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTC 343
Query: 75 RLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEIDI 134
R+WDIRNLSQS+ VLKG +GAIR++R+TSDG+++AMAEPADF+HV+D +GYE QEID
Sbjct: 344 RVWDIRNLSQSVTVLKGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQEIDF 403
Query: 135 FGEIAGVSFSPDTEALFVGVADRTYGSLLEFTRNRNHHYVDTMF 178
FGEI+G+SFSPDTEALF+GV DRTYGSLLEF R RN+ Y+D+
Sbjct: 404 FGEISGISFSPDTEALFIGVWDRTYGSLLEFGRRRNYSYLDSYL 447
>AT3G13340.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:4332370-4334603 FORWARD LENGTH=447
Length = 447
Score = 247 bits (630), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 112/164 (68%), Positives = 137/164 (83%)
Query: 15 SASPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTC 74
S SPDGK LA++GD+ E LI D NTGK +L GHLD+SFASAWHP+G +TGNQD TC
Sbjct: 284 SLSPDGKLLAIVGDNPEGLIVDPNTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTC 343
Query: 75 RLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEIDI 134
R+WDIRNLSQS+ VLKG +GAIR++R+TSDG+++AMAEPADF+HV+D +GYE QEID
Sbjct: 344 RVWDIRNLSQSVTVLKGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQEIDF 403
Query: 135 FGEIAGVSFSPDTEALFVGVADRTYGSLLEFTRNRNHHYVDTMF 178
FGEI+G+SFSPDTEALF+GV DRTYGSLLEF R RN+ Y+D+
Sbjct: 404 FGEISGISFSPDTEALFIGVWDRTYGSLLEFGRRRNYSYLDSYL 447
>AT5G56190.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:22742563-22744909 FORWARD LENGTH=441
Length = 441
Score = 245 bits (625), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 107/164 (65%), Positives = 139/164 (84%)
Query: 15 SASPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTC 74
S SPDGK +AV+GD + L+ D + G+ G+LKGHLDYSFASAWHPNG ATGNQD TC
Sbjct: 278 SLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTC 337
Query: 75 RLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEIDI 134
R+WD R LS+S+AVLKG +GA+R++RFTSDGR++AMAEPADF+H++D+ SGY++ QEID
Sbjct: 338 RIWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQEIDF 397
Query: 135 FGEIAGVSFSPDTEALFVGVADRTYGSLLEFTRNRNHHYVDTMF 178
FGEI+G+SFSPDTE+LF+GV DRTYGSLLE+ R R++ Y+D++
Sbjct: 398 FGEISGISFSPDTESLFIGVWDRTYGSLLEYGRTRDYTYLDSLL 441
>AT5G56190.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:22742654-22744909 FORWARD LENGTH=447
Length = 447
Score = 245 bits (625), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 107/164 (65%), Positives = 139/164 (84%)
Query: 15 SASPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTC 74
S SPDGK +AV+GD + L+ D + G+ G+LKGHLDYSFASAWHPNG ATGNQD TC
Sbjct: 284 SLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTC 343
Query: 75 RLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEIDI 134
R+WD R LS+S+AVLKG +GA+R++RFTSDGR++AMAEPADF+H++D+ SGY++ QEID
Sbjct: 344 RIWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQEIDF 403
Query: 135 FGEIAGVSFSPDTEALFVGVADRTYGSLLEFTRNRNHHYVDTMF 178
FGEI+G+SFSPDTE+LF+GV DRTYGSLLE+ R R++ Y+D++
Sbjct: 404 FGEISGISFSPDTESLFIGVWDRTYGSLLEYGRTRDYTYLDSLL 447
>AT1G55680.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:20804988-20807294 REVERSE LENGTH=445
Length = 445
Score = 241 bits (616), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 106/164 (64%), Positives = 137/164 (83%)
Query: 15 SASPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTC 74
S SPDGK L ++GD+ E L+ D NTGK +L GHLD+SFASAWHP+G +TGNQD TC
Sbjct: 282 SLSPDGKLLTIVGDNPESLLVDPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTC 341
Query: 75 RLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEIDI 134
R+WDIRNLS+S+AVL+G +GAIR++R+TSDG+++AMAEPADF+HV+D +GYE QEID
Sbjct: 342 RVWDIRNLSKSVAVLRGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQEIDF 401
Query: 135 FGEIAGVSFSPDTEALFVGVADRTYGSLLEFTRNRNHHYVDTMF 178
FGEI+G+SFSPDTEALF+GV DRTYGSL+E++R N+ Y+D+
Sbjct: 402 FGEISGISFSPDTEALFIGVWDRTYGSLIEYSRRHNYSYLDSFL 445
>AT5G23430.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:7894073-7899862 REVERSE LENGTH=837
Length = 837
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 12/146 (8%)
Query: 24 AVLGDSTECLIA-----------DVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDT 72
+V D++E L+A D+ K+ +L GH + +HP G+ A+G+ DT
Sbjct: 64 SVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDT 123
Query: 73 TCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEI 132
++WDIR + KG + LRFT DGR++ + + V+D +G +
Sbjct: 124 NLKIWDIRK-KGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFK 182
Query: 133 DIFGEIAGVSFSPDTEALFVGVADRT 158
G+I + F P L G ADRT
Sbjct: 183 SHEGQIQSLDFHPHEFLLATGSADRT 208
>AT5G23430.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:7894073-7899862 REVERSE LENGTH=836
Length = 836
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 12/146 (8%)
Query: 24 AVLGDSTECLIA-----------DVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDT 72
+V D++E L+A D+ K+ +L GH + +HP G+ A+G+ DT
Sbjct: 64 SVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDT 123
Query: 73 TCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEI 132
++WDIR + KG + LRFT DGR++ + + V+D +G +
Sbjct: 124 NLKIWDIRK-KGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFK 182
Query: 133 DIFGEIAGVSFSPDTEALFVGVADRT 158
G+I + F P L G ADRT
Sbjct: 183 SHEGQIQSLDFHPHEFLLATGSADRT 208
>AT3G49660.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:18413690-18415223 FORWARD LENGTH=317
Length = 317
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 13 NISASPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDT 72
+++ S D + + D + DV TG + +L GH +Y+F ++P ++ +G+ D
Sbjct: 76 DVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDE 135
Query: 73 TCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEI 132
T R+WD+ + + VL + A+ F DG + + ++DS +G+ C +
Sbjct: 136 TVRIWDVTT-GKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGH--CVKT 192
Query: 133 DIFGE---IAGVSFSPDTEALFVGVADRT 158
I E ++ V FSP+ + + VG D T
Sbjct: 193 LIDDENPPVSFVRFSPNGKFILVGTLDNT 221
>AT5G08390.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:2701448-2706910 FORWARD LENGTH=839
Length = 839
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 12/146 (8%)
Query: 24 AVLGDSTECLIA-----------DVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDT 72
+V D++E L+A D+ KV +L GH + +HP G+ A+G+ DT
Sbjct: 64 SVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDT 123
Query: 73 TCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEI 132
++WDIR + KG + LRFT DGR++ + + V+D +G +
Sbjct: 124 NLKIWDIRK-KGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFK 182
Query: 133 DIFGEIAGVSFSPDTEALFVGVADRT 158
G+I + F P L G AD+T
Sbjct: 183 SHEGKIQSLDFHPHEFLLATGSADKT 208
>AT1G61210.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:22564785-22571555 FORWARD LENGTH=1179
Length = 1179
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 5/143 (3%)
Query: 19 DGKSLAVLGDSTECLIA--DVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTCRL 76
D + VL ++ +I DV K+ + GH A +HP G+ LA+G+ D ++
Sbjct: 67 DSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKI 126
Query: 77 WDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEIDIF- 135
WDIR + KG I +RFT DGR++ + + V+D +G + E
Sbjct: 127 WDIRK-KGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAG-KLLHEFKFHE 184
Query: 136 GEIAGVSFSPDTEALFVGVADRT 158
G I + F P L G ADRT
Sbjct: 185 GPIRSLDFHPLEFLLATGSADRT 207
>AT1G61210.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:22564785-22571555 FORWARD LENGTH=1181
Length = 1181
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 5/143 (3%)
Query: 19 DGKSLAVLGDSTECLIA--DVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTCRL 76
D + VL ++ +I DV K+ + GH A +HP G+ LA+G+ D ++
Sbjct: 67 DSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKI 126
Query: 77 WDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEIDIF- 135
WDIR + KG I +RFT DGR++ + + V+D +G + E
Sbjct: 127 WDIRK-KGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAG-KLLHEFKFHE 184
Query: 136 GEIAGVSFSPDTEALFVGVADRT 158
G I + F P L G ADRT
Sbjct: 185 GPIRSLDFHPLEFLLATGSADRT 207
>AT1G11160.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:3733406-3739363 FORWARD LENGTH=1021
Length = 1021
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query: 36 DVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTCRLWDIRNLSQSMAVLKGRMGA 95
D+ K+ + GH A +HP G+ LA+G+ DT R+WD R + KG
Sbjct: 86 DLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRK-KGCIQTYKGHTRG 144
Query: 96 IRALRFTSDGRFLAMAEPADFIHVFDSHSG---YE-QCQEIDIFGEIAGVSFSPDTEALF 151
I + F+ DGR++ + + V+D +G +E +C E G I + F P L
Sbjct: 145 ISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHE----GPIRSLDFHPLEFLLA 200
Query: 152 VGVADRT 158
G ADRT
Sbjct: 201 TGSADRT 207
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 11/117 (9%)
Query: 2 IWDERIMGCGKN----------ISASPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLD 51
+WD R GC + I SPDG+ + G + D+ GK+ K H
Sbjct: 126 VWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEG 185
Query: 52 YSFASAWHPNGQILATGNQDTTCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFL 108
+ +HP +LATG+ D T + WD+ + + + +RA+ F DG+ L
Sbjct: 186 PIRSLDFHPLEFLLATGSADRTVKFWDLETF-ELIGTTRPEATGVRAIAFHPDGQTL 241
>AT2G41500.1 | Symbols: LIS, EMB2776 | WD-40 repeat family protein /
small nuclear ribonucleoprotein Prp4p-related |
chr2:17304319-17306855 REVERSE LENGTH=554
Length = 554
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 14 ISASPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTT 73
I+ DG A G + + D+ TG+ +GH+ F+ + PNG LA+G +D
Sbjct: 387 IAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQ 446
Query: 74 CRLWDIRNLSQSMAVLKGRMGAIRALRF-TSDGRFLAMA 111
CR+WD+R + +S+ ++ + +++ +G FLA A
Sbjct: 447 CRIWDLR-MRKSLYIIPAHANLVSQVKYEPQEGYFLATA 484
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 9/121 (7%)
Query: 40 GKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTCRLWDIRNLSQSMAVLKGRMGAIRAL 99
G + + +GHLD A+HP+G+ L T + D T RLWDI N + + +G ++ +
Sbjct: 329 GTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDI-NTGAELLLQEGHSRSVYGI 387
Query: 100 RFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEIDIF----GEIAGVSFSPDTEALFVGVA 155
F DG A V+D +G + I +F + V+FSP+ L G
Sbjct: 388 AFQQDGALAASCGLDSLARVWDLRTG----RSILVFQGHIKPVFSVNFSPNGYHLASGGE 443
Query: 156 D 156
D
Sbjct: 444 D 444
>AT1G04510.2 | Symbols: MAC3A | MOS4-associated complex 3A |
chr1:1226749-1230592 FORWARD LENGTH=523
Length = 523
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 55/88 (62%), Gaps = 7/88 (7%)
Query: 28 DSTECLIADVNTG----KVTGSLKGHLDYSFASAWHPNGQILATGNQDTTCRLWDIRNLS 83
DST C D+++G +VT + + ++Y+ A+A+HP+G IL TG + ++WD+++ +
Sbjct: 330 DSTWCFY-DLSSGLCLAQVTDASENDVNYT-AAAFHPDGLILGTGTAQSIVKIWDVKSQA 387
Query: 84 QSMAVLKGRMGAIRALRFTSDGRFLAMA 111
++A G G I ++ F+ +G FLA A
Sbjct: 388 -NVAKFGGHNGEITSISFSENGYFLATA 414
>AT1G04510.1 | Symbols: MAC3A | MOS4-associated complex 3A |
chr1:1226749-1230592 FORWARD LENGTH=523
Length = 523
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 55/88 (62%), Gaps = 7/88 (7%)
Query: 28 DSTECLIADVNTG----KVTGSLKGHLDYSFASAWHPNGQILATGNQDTTCRLWDIRNLS 83
DST C D+++G +VT + + ++Y+ A+A+HP+G IL TG + ++WD+++ +
Sbjct: 330 DSTWCFY-DLSSGLCLAQVTDASENDVNYT-AAAFHPDGLILGTGTAQSIVKIWDVKSQA 387
Query: 84 QSMAVLKGRMGAIRALRFTSDGRFLAMA 111
++A G G I ++ F+ +G FLA A
Sbjct: 388 -NVAKFGGHNGEITSISFSENGYFLATA 414
>AT2G33340.2 | Symbols: MAC3B | MOS4-associated complex 3B |
chr2:14126584-14131000 REVERSE LENGTH=525
Length = 525
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 49 HLDYSFASAWHPNGQILATGNQDTTCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFL 108
++DY+ A+A+HP+G IL TG + ++WD+++ + ++A G G + A+ F+ +G FL
Sbjct: 353 NVDYT-AAAFHPDGLILGTGTSQSVVKIWDVKSQA-NVAKFDGHTGEVTAISFSENGYFL 410
Query: 109 AMA 111
A A
Sbjct: 411 ATA 413
>AT2G33340.1 | Symbols: MAC3B | MOS4-associated complex 3B |
chr2:14126584-14131000 REVERSE LENGTH=525
Length = 525
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 49 HLDYSFASAWHPNGQILATGNQDTTCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFL 108
++DY+ A+A+HP+G IL TG + ++WD+++ + ++A G G + A+ F+ +G FL
Sbjct: 353 NVDYT-AAAFHPDGLILGTGTSQSVVKIWDVKSQA-NVAKFDGHTGEVTAISFSENGYFL 410
Query: 109 AMA 111
A A
Sbjct: 411 ATA 413
>AT5G25150.1 | Symbols: TAF5 | TBP-associated factor 5 |
chr5:8677117-8682058 FORWARD LENGTH=669
Length = 669
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 46 LKGHLDYSFASAWHPNGQILATGNQDTTCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDG 105
+ GHL WHPN +ATG+ D T RLWD++ + + + G + +L + DG
Sbjct: 498 MAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQT-GECVRIFIGHRSMVLSLAMSPDG 556
Query: 106 RFLAMAEPADFIHVFD 121
R++A + I ++D
Sbjct: 557 RYMASGDEDGTIMMWD 572
>AT2G33340.3 | Symbols: MAC3B | MOS4-associated complex 3B |
chr2:14126703-14131000 REVERSE LENGTH=485
Length = 485
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 49 HLDYSFASAWHPNGQILATGNQDTTCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFL 108
++DY+ A+A+HP+G IL TG + ++WD+++ + ++A G G + A+ F+ +G FL
Sbjct: 353 NVDYT-AAAFHPDGLILGTGTSQSVVKIWDVKSQA-NVAKFDGHTGEVTAISFSENGYFL 410
Query: 109 AMA 111
A A
Sbjct: 411 ATA 413
>AT2G43770.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr2:18134272-18135303 REVERSE LENGTH=343
Length = 343
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%)
Query: 46 LKGHLDYSFASAWHPNGQILATGNQDTTCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDG 105
L GH + ++P G ++A+G+ D LW + ++ VLKG AI L +TSDG
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDG 108
Query: 106 RFLAMAEPADFIHVFDSHSGYE 127
+ A P + +D +G +
Sbjct: 109 SQIVSASPDKTVRAWDVETGKQ 130
>AT5G56130.1 | Symbols: TEX1, AtTEX1, THO3 | Transducin/WD40
repeat-like superfamily protein | chr5:22722755-22725065
REVERSE LENGTH=315
Length = 315
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Query: 47 KGHLDYSFASAWHPNGQILATGNQDTTCRLWDIRNLSQSMAV---LKGRMGAIRALRF-T 102
+GH + AW+ NG LA+G+ D T R+W+I S A LKG ++ L +
Sbjct: 17 QGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDP 76
Query: 103 SDGRFLAMAEPADFIHVFDSHSGYEQC-QEIDIFGEIAGVSFSPDTEALFVGVAD 156
+A A + ++D+ SG +C Q++++ GE +++ PD + VG D
Sbjct: 77 KHSDLVATASGDKSVRLWDARSG--KCTQQVELSGENINITYKPDGTHVAVGNRD 129
>AT4G15900.1 | Symbols: PRL1 | pleiotropic regulatory locus 1 |
chr4:9023775-9027443 FORWARD LENGTH=486
Length = 486
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%)
Query: 27 GDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTCRLWDIRNLSQSM 86
GD + D+ KV S GHL + A HP +L TG +D+ CR+WDIR Q
Sbjct: 237 GDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIF 296
Query: 87 AV 88
A+
Sbjct: 297 AL 298
>AT5G16750.1 | Symbols: TOZ | Transducin family protein / WD-40
repeat family protein | chr5:5504541-5509266 REVERSE
LENGTH=876
Length = 876
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 15/137 (10%)
Query: 2 IWDERIMGCGKN----------ISASPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLD 51
+WD + C ++ ++ G LA G + L+ DV+ G T +GH
Sbjct: 86 VWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKG 145
Query: 52 YSFASAWHP--NGQILATGNQDTTCRLWDI--RNLSQS-MAVLKGRMGAIRALRFTSDGR 106
+ +HP N IL +G+ D T R+WD+ +N + +A+++ A+ ++ + DG
Sbjct: 146 VVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGL 205
Query: 107 FLAMAEPADFIHVFDSH 123
L A ++++D H
Sbjct: 206 TLFSAGRDKVVNLWDLH 222
>AT3G42660.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:14751280-14755701 FORWARD
LENGTH=953
Length = 953
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 17 SPDGKSLAVLGDSTECLIADVNTGKVTGSLKG-HLDYSFASAWHPNGQILATGNQDTTCR 75
SPDG++LAV G + ++ D TG+ +L+G HL+ W PNG+ +AT D
Sbjct: 204 SPDGRTLAVPGLRNDVVMYDRFTGEKLFALRGDHLEAICYLTWAPNGKYIATSGLDKQVL 263
Query: 76 LWDI 79
LWD+
Sbjct: 264 LWDV 267
>AT3G16650.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:5671133-5675106 FORWARD LENGTH=479
Length = 479
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 42/97 (43%), Gaps = 12/97 (12%)
Query: 27 GDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTCRLWDIRNLSQSM 86
GD + D+ KV S GHL + A HP ++ TG +D+ CR+WDIR Q
Sbjct: 231 GDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQ-- 288
Query: 87 AVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSH 123
I L SD F +A P D + SH
Sbjct: 289 ---------IFVLPHDSD-VFSVLARPTDPQVITGSH 315