Miyakogusa Predicted Gene
- Lj0g3v0249679.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0249679.1 tr|G7IF88|G7IF88_MEDTR Katanin p60
ATPase-containing subunit A-like protein OS=Medicago truncatula
G,45.16,2e-19,AAA-FAMILY ATPASE,NULL; AAA ATPASE,NULL; AAA,ATPase,
AAA-type, core; AAA,ATPase, AAA-type, conserved,CUFF.16332.1
(166 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G27680.1 | Symbols: | P-loop containing nucleoside triphosph... 220 3e-58
AT5G53540.1 | Symbols: | P-loop containing nucleoside triphosph... 217 3e-57
AT1G64110.1 | Symbols: | P-loop containing nucleoside triphosph... 105 2e-23
AT1G64110.3 | Symbols: | P-loop containing nucleoside triphosph... 105 2e-23
AT1G64110.2 | Symbols: | P-loop containing nucleoside triphosph... 105 2e-23
AT1G02890.2 | Symbols: | AAA-type ATPase family protein | chr1:... 100 8e-22
AT1G02890.1 | Symbols: | AAA-type ATPase family protein | chr1:... 99 9e-22
AT4G24860.1 | Symbols: | P-loop containing nucleoside triphosph... 99 1e-21
AT1G50140.1 | Symbols: | P-loop containing nucleoside triphosph... 97 7e-21
AT1G50140.2 | Symbols: | P-loop containing nucleoside triphosph... 97 7e-21
AT4G02480.1 | Symbols: | AAA-type ATPase family protein | chr4:... 96 1e-20
AT5G52882.1 | Symbols: | P-loop containing nucleoside triphosph... 92 1e-19
AT3G19740.1 | Symbols: | P-loop containing nucleoside triphosph... 92 2e-19
AT4G28000.1 | Symbols: | P-loop containing nucleoside triphosph... 89 1e-18
AT1G62130.1 | Symbols: | AAA-type ATPase family protein | chr1:... 79 2e-15
AT2G45500.2 | Symbols: | AAA-type ATPase family protein | chr2:... 73 1e-13
AT2G45500.1 | Symbols: | AAA-type ATPase family protein | chr2:... 73 1e-13
AT3G27120.1 | Symbols: | P-loop containing nucleoside triphosph... 55 2e-08
AT2G34560.1 | Symbols: | P-loop containing nucleoside triphosph... 54 4e-08
AT2G34560.2 | Symbols: | P-loop containing nucleoside triphosph... 54 5e-08
AT1G45000.1 | Symbols: | AAA-type ATPase family protein | chr1:... 53 7e-08
AT5G43010.1 | Symbols: RPT4A | regulatory particle triple-A ATPa... 50 5e-07
AT5G08470.1 | Symbols: PEX1 | peroxisome 1 | chr5:2735925-274273... 49 1e-06
AT3G09840.1 | Symbols: CDC48, ATCDC48, CDC48A | cell division cy... 49 2e-06
AT1G50250.1 | Symbols: FTSH1 | FTSH protease 1 | chr1:18614398-1... 48 3e-06
AT1G80350.1 | Symbols: ERH3, AAA1, FRA2, LUE1, ATKTN1, KTN1, FRC... 47 5e-06
AT5G42270.1 | Symbols: VAR1, FTSH5 | FtsH extracellular protease... 47 6e-06
>AT4G27680.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:13821263-13823083
FORWARD LENGTH=398
Length = 398
Score = 220 bits (561), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/185 (63%), Positives = 137/185 (74%), Gaps = 22/185 (11%)
Query: 1 MKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQSFEI-------------- 46
MKTEFMALWDGF+TD +ARVMVLAATNRPSELDEAILRRLPQ+FEI
Sbjct: 205 MKTEFMALWDGFSTDPHARVMVLAATNRPSELDEAILRRLPQAFEIGIPDRRERAEILKV 264
Query: 47 ----ERVEDNIDFGHIAALCEGYTGSDLFDLCKKAAYFPIRELLDDEKKGKRSPFQASRP 102
ERVE +IDF HIA LCEGYTGSD+F+LCKKAAYFPIRE+LD E+KGK P RP
Sbjct: 265 TLKGERVEPDIDFDHIARLCEGYTGSDIFELCKKAAYFPIREILDAERKGK--PCLDPRP 322
Query: 103 LSELDLAKALATSRKTKVAANEY--GGLNLRVQGESGDYQIQAAINEFSKLVVSHMVNLQ 160
LS+LDL K LATS+KT+VAA EY + +G ++QAAI+ SKL+VS ++NLQ
Sbjct: 323 LSQLDLEKVLATSKKTQVAAGEYSLSSQSSAWRGSREPDEVQAAISGISKLLVSQIINLQ 382
Query: 161 SDSQD 165
S+SQD
Sbjct: 383 SESQD 387
>AT5G53540.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:21749561-21751099
REVERSE LENGTH=403
Length = 403
Score = 217 bits (552), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 116/186 (62%), Positives = 136/186 (73%), Gaps = 23/186 (12%)
Query: 1 MKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQSFEI-------------- 46
MKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRR PQSFEI
Sbjct: 208 MKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRFPQSFEIGMPDCQERAQILKV 267
Query: 47 ----ERVEDNIDFGHIAALCEGYTGSDLFDLCKKAAYFPIRELLDDEKKGKRSPFQASRP 102
E VE +I++ IA LCE YTGSD+F+LCKKAAYFPIRE+L+ EK+GKR RP
Sbjct: 268 VLKGESVESDINYDRIARLCEDYTGSDIFELCKKAAYFPIREILEAEKEGKR--VSVPRP 325
Query: 103 LSELDLAKALATSRKTKVAANEYGGLNLR--VQGESGDY-QIQAAINEFSKLVVSHMVNL 159
L++LDL K LATS+KT+VAA+EY GL+ + V G + ++QAAIN SKL VS + N+
Sbjct: 326 LTQLDLEKVLATSKKTQVAASEYTGLSSQSSVWGSPSNADEVQAAINGISKLFVSQLRNI 385
Query: 160 QSDSQD 165
Q DSQD
Sbjct: 386 QPDSQD 391
>AT1G64110.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:23796887-23801240
REVERSE LENGTH=824
Length = 824
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 86/160 (53%), Gaps = 42/160 (26%)
Query: 1 MKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQSFEI-------------- 46
+K EFM+ WDG T R++VLAATNRP +LDEAI+RR + +
Sbjct: 637 IKNEFMSHWDGLMTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPAVENREKILRT 696
Query: 47 ----ERVEDNIDFGHIAALCEGYTGSDLFDLCKKAAYFPIRELL------DDEKKGKRSP 96
E+V++N+D+ +A + EGYTGSDL +LC AAY P+REL+ D EKK +R P
Sbjct: 697 LLAKEKVDENLDYKELAMMTEGYTGSDLKNLCTTAAYRPVRELIQQERIKDTEKKKQREP 756
Query: 97 FQAS-------------RPLSELDLAKALATSRKTKVAAN 123
+A RPL+ D +A K +VAA+
Sbjct: 757 TKAGEEDEGKEERVITLRPLNRQDFKEA-----KNQVAAS 791
>AT1G64110.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:23796887-23801255
REVERSE LENGTH=827
Length = 827
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 86/160 (53%), Gaps = 42/160 (26%)
Query: 1 MKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQSFEI-------------- 46
+K EFM+ WDG T R++VLAATNRP +LDEAI+RR + +
Sbjct: 640 IKNEFMSHWDGLMTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPAVENREKILRT 699
Query: 47 ----ERVEDNIDFGHIAALCEGYTGSDLFDLCKKAAYFPIRELL------DDEKKGKRSP 96
E+V++N+D+ +A + EGYTGSDL +LC AAY P+REL+ D EKK +R P
Sbjct: 700 LLAKEKVDENLDYKELAMMTEGYTGSDLKNLCTTAAYRPVRELIQQERIKDTEKKKQREP 759
Query: 97 FQAS-------------RPLSELDLAKALATSRKTKVAAN 123
+A RPL+ D +A K +VAA+
Sbjct: 760 TKAGEEDEGKEERVITLRPLNRQDFKEA-----KNQVAAS 794
>AT1G64110.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:23796887-23801255
REVERSE LENGTH=829
Length = 829
Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 86/160 (53%), Gaps = 42/160 (26%)
Query: 1 MKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQSFEI-------------- 46
+K EFM+ WDG T R++VLAATNRP +LDEAI+RR + +
Sbjct: 642 IKNEFMSHWDGLMTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPAVENREKILRT 701
Query: 47 ----ERVEDNIDFGHIAALCEGYTGSDLFDLCKKAAYFPIRELL------DDEKKGKRSP 96
E+V++N+D+ +A + EGYTGSDL +LC AAY P+REL+ D EKK +R P
Sbjct: 702 LLAKEKVDENLDYKELAMMTEGYTGSDLKNLCTTAAYRPVRELIQQERIKDTEKKKQREP 761
Query: 97 FQAS-------------RPLSELDLAKALATSRKTKVAAN 123
+A RPL+ D +A K +VAA+
Sbjct: 762 TKAGEEDEGKEERVITLRPLNRQDFKEA-----KNQVAAS 796
>AT1G02890.2 | Symbols: | AAA-type ATPase family protein |
chr1:645372-651797 REVERSE LENGTH=1218
Length = 1218
Score = 99.8 bits (247), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 71/117 (60%), Gaps = 19/117 (16%)
Query: 1 MKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQSFEI-------------- 46
MK EFM WDG T RV+VLAATNRP +LDEA++RRLP+ +
Sbjct: 1038 MKNEFMINWDGLRTKDKERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDSANRSKILSV 1097
Query: 47 ----ERVEDNIDFGHIAALCEGYTGSDLFDLCKKAAYFPIRELLDDEKKGKRSPFQA 99
E + +++D IA + +GY+GSDL +LC AA+ PIRE+L+ EKK +RS QA
Sbjct: 1098 ILAKEEMAEDVDLEAIANMTDGYSGSDLKNLCVTAAHLPIREILEKEKK-ERSVAQA 1153
>AT1G02890.1 | Symbols: | AAA-type ATPase family protein |
chr1:645372-651797 REVERSE LENGTH=1246
Length = 1246
Score = 99.4 bits (246), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 71/117 (60%), Gaps = 19/117 (16%)
Query: 1 MKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQSFEI-------------- 46
MK EFM WDG T RV+VLAATNRP +LDEA++RRLP+ +
Sbjct: 1066 MKNEFMINWDGLRTKDKERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDSANRSKILSV 1125
Query: 47 ----ERVEDNIDFGHIAALCEGYTGSDLFDLCKKAAYFPIRELLDDEKKGKRSPFQA 99
E + +++D IA + +GY+GSDL +LC AA+ PIRE+L+ EKK +RS QA
Sbjct: 1126 ILAKEEMAEDVDLEAIANMTDGYSGSDLKNLCVTAAHLPIREILEKEKK-ERSVAQA 1181
>AT4G24860.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:12801580-12808190
REVERSE LENGTH=1122
Length = 1122
Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 68/109 (62%), Gaps = 18/109 (16%)
Query: 1 MKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQSFEI-------------- 46
+K EFM WDG TT + RV+VLAATNRP +LDEA++RRLP+ +
Sbjct: 942 IKNEFMMHWDGLTTQERERVLVLAATNRPFDLDEAVIRRLPRRLMVGLPDTSNRAFILKV 1001
Query: 47 ----ERVEDNIDFGHIAALCEGYTGSDLFDLCKKAAYFPIRELLDDEKK 91
E + ++D G IA++ GY+GSDL +LC AA+ PI+E+L+ EK+
Sbjct: 1002 ILAKEDLSPDLDIGEIASMTNGYSGSDLKNLCVTAAHRPIKEILEKEKR 1050
>AT1G50140.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:18569921-18578663
REVERSE LENGTH=1003
Length = 1003
Score = 96.7 bits (239), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 74/126 (58%), Gaps = 20/126 (15%)
Query: 1 MKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQSFEI-------------- 46
M+ EFMA WDG + + R+++L ATNRP +LD+A++RRLP+ +
Sbjct: 836 MRNEFMAAWDGLRSKDSQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRLKILKI 895
Query: 47 ----ERVEDNIDFGHIAALCEGYTGSDLFDLCKKAAYFPIRELLDDEKKGKRSPFQASRP 102
E +E + F +A EGY+GSDL +LC AAY P++ELL +E+KG R+ +AS
Sbjct: 896 FLTPENLESDFQFEKLAKETEGYSGSDLKNLCIAAAYRPVQELLQEEQKGARA--EASPG 953
Query: 103 LSELDL 108
L L L
Sbjct: 954 LRSLSL 959
>AT1G50140.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:18569921-18578663
REVERSE LENGTH=981
Length = 981
Score = 96.7 bits (239), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 74/126 (58%), Gaps = 20/126 (15%)
Query: 1 MKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQSFEI-------------- 46
M+ EFMA WDG + + R+++L ATNRP +LD+A++RRLP+ +
Sbjct: 814 MRNEFMAAWDGLRSKDSQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRLKILKI 873
Query: 47 ----ERVEDNIDFGHIAALCEGYTGSDLFDLCKKAAYFPIRELLDDEKKGKRSPFQASRP 102
E +E + F +A EGY+GSDL +LC AAY P++ELL +E+KG R+ +AS
Sbjct: 874 FLTPENLESDFQFEKLAKETEGYSGSDLKNLCIAAAYRPVQELLQEEQKGARA--EASPG 931
Query: 103 LSELDL 108
L L L
Sbjct: 932 LRSLSL 937
>AT4G02480.1 | Symbols: | AAA-type ATPase family protein |
chr4:1082082-1088680 REVERSE LENGTH=1265
Length = 1265
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 18/104 (17%)
Query: 1 MKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQSFEI-------------- 46
MK EFM WDG T RV+VLAATNRP +LDEA++RRLP+ +
Sbjct: 1085 MKNEFMVNWDGLRTKDRERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDATNRSKILSV 1144
Query: 47 ----ERVEDNIDFGHIAALCEGYTGSDLFDLCKKAAYFPIRELL 86
E + ++D IA + +GY+GSDL +LC AA+FPIRE+L
Sbjct: 1145 ILAKEEIAPDVDLEAIANMTDGYSGSDLKNLCVTAAHFPIREIL 1188
>AT5G52882.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:21434155-21438362
REVERSE LENGTH=829
Length = 829
Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 87/173 (50%), Gaps = 49/173 (28%)
Query: 1 MKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRR--------LPQSFEIERV--- 49
+K EFM WDG T R++VLAATNRP +LDEAI+RR LP E++
Sbjct: 638 IKNEFMTHWDGLMTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREKILRT 697
Query: 50 ------EDNIDFGHIAALCEGYTGSDLFDLCKKAAYFPIRELL------DDEKKGKRSPF 97
+N+DF + + EGY+GSDL +LC AAY P+REL+ D E+K +
Sbjct: 698 LLSKEKTENLDFHELGQITEGYSGSDLKNLCITAAYRPVRELIQQERLKDQERKKREEAG 757
Query: 98 QAS------------------RPLSELDLAKALATSRKTKVA---ANEYGGLN 129
+ + RPL+ D+ KA KT+VA A+E G+N
Sbjct: 758 KGTEESKEEEAEASEERVITLRPLNMEDMRKA-----KTQVAASFASEGAGMN 805
>AT3G19740.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6855944-6862930
REVERSE LENGTH=993
Length = 993
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 75/134 (55%), Gaps = 23/134 (17%)
Query: 1 MKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQSFEI-------------- 46
M+ EFMA WDG + + R+++L ATNRP +LD+A++RRLP+ +
Sbjct: 826 MRNEFMAAWDGLRSKDSQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRLKILKI 885
Query: 47 ----ERVEDNIDFGHIAALCEGYTGSDLFDLCKKAAYFPIRELLDDEKKGKRSPFQAS-- 100
E +E +F +A EGY+GSDL +LC AAY P++ELL +E K S AS
Sbjct: 886 FLTPENLETGFEFDKLAKETEGYSGSDLKNLCIAAAYRPVQELLQEENKD--SVTNASPD 943
Query: 101 -RPLSELDLAKALA 113
RPLS D ++ A
Sbjct: 944 LRPLSLDDFIQSKA 957
>AT4G28000.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:13925456-13929280
FORWARD LENGTH=830
Length = 830
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 63/106 (59%), Gaps = 17/106 (16%)
Query: 1 MKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRR--------LPQSFEIERV--- 49
+K EFM WDG ++ R++VLAATNRP +LDEAI+RR LP E++
Sbjct: 639 IKNEFMTHWDGLMSNAGDRILVLAATNRPFDLDEAIIRRFERRIMVGLPSVESREKILRT 698
Query: 50 ------EDNIDFGHIAALCEGYTGSDLFDLCKKAAYFPIRELLDDE 89
+N+DF +A + +GY+GSDL + C AAY P+REL+ E
Sbjct: 699 LLSKEKTENLDFQELAQMTDGYSGSDLKNFCTTAAYRPVRELIKQE 744
>AT1G62130.1 | Symbols: | AAA-type ATPase family protein |
chr1:22962365-22968920 REVERSE LENGTH=1043
Length = 1043
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 18/107 (16%)
Query: 2 KTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQSFEI--------------- 46
K EF+ WDG T++ RV+VLAATNRP +LDEA++RRLP +
Sbjct: 864 KNEFIINWDGLRTNEKERVLVLAATNRPFDLDEAVIRRLPHRLMVGLPDARSRSKILKVI 923
Query: 47 ---ERVEDNIDFGHIAALCEGYTGSDLFDLCKKAAYFPIRELLDDEK 90
E + + D +A++ GY+G+DL +LC AA I E+++ EK
Sbjct: 924 LSKEDLSPDFDIDEVASMTNGYSGNDLKNLCVTAARRRIIEIVEKEK 970
>AT2G45500.2 | Symbols: | AAA-type ATPase family protein |
chr2:18749973-18752636 REVERSE LENGTH=487
Length = 487
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 19/104 (18%)
Query: 1 MKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQSFEIERVEDNI------- 53
+K+EF+ +DG T++ + V+++ ATN+P ELD+A+LRRL + + + N+
Sbjct: 335 LKSEFLIQFDGVTSNPDDLVIIIGATNKPQELDDAVLRRLVKRIYVPLPDSNVRKLLFKT 394
Query: 54 ------------DFGHIAALCEGYTGSDLFDLCKKAAYFPIREL 85
D I EGY+GSDL LC++AA PIREL
Sbjct: 395 KLKCQPHSLSDGDIDKIVKETEGYSGSDLQALCEEAAMMPIREL 438
>AT2G45500.1 | Symbols: | AAA-type ATPase family protein |
chr2:18749973-18752636 REVERSE LENGTH=491
Length = 491
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 19/104 (18%)
Query: 1 MKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQSFEIERVEDNI------- 53
+K+EF+ +DG T++ + V+++ ATN+P ELD+A+LRRL + + + N+
Sbjct: 339 LKSEFLIQFDGVTSNPDDLVIIIGATNKPQELDDAVLRRLVKRIYVPLPDSNVRKLLFKT 398
Query: 54 ------------DFGHIAALCEGYTGSDLFDLCKKAAYFPIREL 85
D I EGY+GSDL LC++AA PIREL
Sbjct: 399 KLKCQPHSLSDGDIDKIVKETEGYSGSDLQALCEEAAMMPIREL 442
>AT3G27120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:10000248-10003265
REVERSE LENGTH=476
Length = 476
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 21/106 (19%)
Query: 1 MKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRR--------LPQSFEIERVEDN 52
+KT+F+ +GF + + +++++ ATNRP ELDEA RR LP S + N
Sbjct: 319 LKTQFLIEMEGFDSG-SEQILLIGATNRPQELDEAARRRLTKRLYIPLPSSEARAWIIQN 377
Query: 53 I------------DFGHIAALCEGYTGSDLFDLCKKAAYFPIRELL 86
+ D I L EGY+GSD+ +L K A P+RE L
Sbjct: 378 LLKKDGLFTLSDDDMNIICNLTEGYSGSDMKNLVKDATMGPLREAL 423
>AT2G34560.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14560266-14562695
FORWARD LENGTH=384
Length = 384
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 66/152 (43%), Gaps = 24/152 (15%)
Query: 1 MKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQSFEIERVEDNIDFGHIAA 60
+KTE + DG N V VLAATN P ELD A+LRRL + + + G
Sbjct: 225 LKTELLIQMDGLQK-TNELVFVLAATNLPWELDAAMLRRLEKRILVPLPDPEARRGMFEM 283
Query: 61 LC------------------EGYTGSDLFDLCKKAAYFPIRELL----DDEKKGKRSPFQ 98
L EGY+GSD+ LCK+AA P+R L D E
Sbjct: 284 LIPSQPGDEPLPHDVLVEKSEGYSGSDIRILCKEAAMQPLRRTLAILEDREDVVPEDELP 343
Query: 99 ASRPLSELDLAKALATSRKT-KVAANEYGGLN 129
P+ D+ +AL+ +R + + A+ Y N
Sbjct: 344 KIGPILPEDIDRALSNTRPSAHLHAHLYDKFN 375
>AT2G34560.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14560266-14562695
FORWARD LENGTH=393
Length = 393
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 66/152 (43%), Gaps = 24/152 (15%)
Query: 1 MKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQSFEIERVEDNIDFGHIAA 60
+KTE + DG N V VLAATN P ELD A+LRRL + + + G
Sbjct: 234 LKTELLIQMDGLQK-TNELVFVLAATNLPWELDAAMLRRLEKRILVPLPDPEARRGMFEM 292
Query: 61 LC------------------EGYTGSDLFDLCKKAAYFPIRELL----DDEKKGKRSPFQ 98
L EGY+GSD+ LCK+AA P+R L D E
Sbjct: 293 LIPSQPGDEPLPHDVLVEKSEGYSGSDIRILCKEAAMQPLRRTLAILEDREDVVPEDELP 352
Query: 99 ASRPLSELDLAKALATSRKT-KVAANEYGGLN 129
P+ D+ +AL+ +R + + A+ Y N
Sbjct: 353 KIGPILPEDIDRALSNTRPSAHLHAHLYDKFN 384
>AT1G45000.1 | Symbols: | AAA-type ATPase family protein |
chr1:17009220-17011607 FORWARD LENGTH=399
Length = 399
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 50/100 (50%), Gaps = 22/100 (22%)
Query: 4 EFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQSFEI------ERVE----- 50
E + DGF DQ +V ++ ATNRP LD A+LR RL + EI R+E
Sbjct: 265 ELLNQLDGF--DQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIH 322
Query: 51 -------DNIDFGHIAALCEGYTGSDLFDLCKKAAYFPIR 83
ID+ I L EG+ G+DL ++C +A F IR
Sbjct: 323 ASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIR 362
>AT5G43010.1 | Symbols: RPT4A | regulatory particle triple-A ATPase
4A | chr5:17248563-17251014 REVERSE LENGTH=399
Length = 399
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 22/100 (22%)
Query: 4 EFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQSFEI------ERVE----- 50
E + DGF D +V ++ ATNRP LD A+LR RL + EI R++
Sbjct: 265 ELLNQLDGF--DNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIH 322
Query: 51 -------DNIDFGHIAALCEGYTGSDLFDLCKKAAYFPIR 83
ID+ I L EG+ G+DL ++C +A F IR
Sbjct: 323 AAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIR 362
>AT5G08470.1 | Symbols: PEX1 | peroxisome 1 | chr5:2735925-2742731
FORWARD LENGTH=1130
Length = 1130
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 58/125 (46%), Gaps = 24/125 (19%)
Query: 20 VMVLAATNRPSELDEAILR-----RL--------PQSFEIERV-------EDNIDFGHIA 59
V V AAT+RP LD A+LR RL P+ EI V D+ID IA
Sbjct: 981 VFVFAATSRPDLLDPALLRPGRLDRLLLCDFPSPPERLEILTVLSRKLLMADDIDLEPIA 1040
Query: 60 ALCEGYTGSDLFDLCKKAAYFPIRELLDDEKKGKRSPFQASRPLSELDLAKALATSRKTK 119
+ EG++G+DL L A + E L+ E K P + P+ L K++A+ K
Sbjct: 1041 LMTEGFSGADLQALLSDAQLAAVHEYLNREDK----PETGTTPIITDPLLKSIASKTKPS 1096
Query: 120 VAANE 124
V+ E
Sbjct: 1097 VSETE 1101
>AT3G09840.1 | Symbols: CDC48, ATCDC48, CDC48A | cell division cycle
48 | chr3:3019494-3022832 FORWARD LENGTH=809
Length = 809
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 24/114 (21%)
Query: 4 EFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQSFEI--------------- 46
+ + DG + V ++ ATNRP +D A+LR RL Q I
Sbjct: 607 QLLTEMDGMNAKKT--VFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAA 664
Query: 47 ---ERVEDNIDFGHIAALCEGYTGSDLFDLCKKAAYFPIRELL--DDEKKGKRS 95
+ ++D G +A +G++G+D+ ++C++A + IRE + D EK+ +RS
Sbjct: 665 LRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKEKRRS 718
>AT1G50250.1 | Symbols: FTSH1 | FTSH protease 1 |
chr1:18614398-18616930 REVERSE LENGTH=716
Length = 716
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 22/108 (20%)
Query: 4 EFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQSFEIER------------- 48
+ + DGF+ N+ V+VLAATNRP LD A+LR R + ++R
Sbjct: 387 QLLTEMDGFSG--NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVH 444
Query: 49 -----VEDNIDFGHIAALCEGYTGSDLFDLCKKAAYFPIRELLDDEKK 91
+ ++DF +A G+TG+DL +L +AA R L + K
Sbjct: 445 SRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEISK 492
>AT1G80350.1 | Symbols: ERH3, AAA1, FRA2, LUE1, ATKTN1, KTN1, FRC2,
BOT1, FTR | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:30205499-30208050
REVERSE LENGTH=523
Length = 523
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 24/107 (22%)
Query: 1 MKTEFMALWDGF----TTDQNAR--VMVLAATNRPSELDEAILRRLPQSFEIE------- 47
+K+E + DG T + +R VMVLAATN P ++DEA+ RRL + I
Sbjct: 359 VKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPDFESR 418
Query: 48 -----------RVEDNIDFGHIAALCEGYTGSDLFDLCKKAAYFPIR 83
V +++ +A EGY+G DL ++C+ A+ +R
Sbjct: 419 KALININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASMNGMR 465
>AT5G42270.1 | Symbols: VAR1, FTSH5 | FtsH extracellular protease
family | chr5:16902659-16905102 FORWARD LENGTH=704
Length = 704
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 22/108 (20%)
Query: 4 EFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQSFEIER------------- 48
+ + DGF+ N+ V+VLAATNRP LD A+LR R + ++R
Sbjct: 375 QLLTEMDGFSG--NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVH 432
Query: 49 -----VEDNIDFGHIAALCEGYTGSDLFDLCKKAAYFPIRELLDDEKK 91
+ ++D+ +A G+TG+DL +L +AA R L + K
Sbjct: 433 SRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARRELKEISK 480