Miyakogusa Predicted Gene

Lj0g3v0249619.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0249619.1 CUFF.16321.1
         (379 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G57850.1 | Symbols:  | D-aminoacid aminotransferase-like PLP-...   451   e-127
AT3G05190.1 | Symbols:  | D-aminoacid aminotransferase-like PLP-...    92   6e-19
AT5G27410.1 | Symbols:  | D-aminoacid aminotransferase-like PLP-...    89   6e-18
AT5G27410.2 | Symbols:  | D-aminoacid aminotransferase-like PLP-...    89   6e-18

>AT5G57850.1 | Symbols:  | D-aminoacid aminotransferase-like
           PLP-dependent enzymes superfamily protein |
           chr5:23435548-23437287 REVERSE LENGTH=373
          Length = 373

 Score =  451 bits (1161), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 221/336 (65%), Positives = 272/336 (80%), Gaps = 9/336 (2%)

Query: 46  SDPKTEVSDVPLLSSSEAYERLKTFREKKSGKQQYLAMYSSIFGGITTDPAAMVIPMDDH 105
           SD  ++  +VP+LSS E  ERLK  R    G QQ+LAMYSS+  GITTDPAAMV+P+DDH
Sbjct: 45  SDSSSQSWNVPVLSSYEVGERLKLAR----GGQQFLAMYSSVVDGITTDPAAMVLPLDDH 100

Query: 106 MVHRGHGVFDTAAIMDGHLYELDQHLDRFLRSASKSGIDPPFDRESVCKILIQTVSASQC 165
           MVHRGHGVFDTA I++G+LYELDQHLDR LRSAS + I  PFDRE++ +ILIQTVS S C
Sbjct: 101 MVHRGHGVFDTALIINGYLYELDQHLDRILRSASMAKIPLPFDRETIKRILIQTVSVSGC 160

Query: 166 RKGSLRYWLSAGPGDFQLSPSGCYQSVLYAVVIQ-DLSLEQIKSRGVKVITSSVPIKHPQ 224
           R GSLRYWLSAGPGDF LSPS C +  LYA+VI+ + ++  I   GVKV+TSS+PIK P+
Sbjct: 161 RDGSLRYWLSAGPGDFLLSPSQCLKPTLYAIVIKTNFAINPI---GVKVVTSSIPIKPPE 217

Query: 225 FATTKSVNYLPNVLSKMEAEEVGAFAGIWLDDEGFVAEGPNMNVAFVTK-EKVLIMPYFD 283
           FAT KSVNYLPNVLS+MEAE  GA+AGIW+  +GF+AEGPNMNVAFV    K L+MP FD
Sbjct: 218 FATVKSVNYLPNVLSQMEAEAKGAYAGIWVCKDGFIAEGPNMNVAFVVNGGKELVMPRFD 277

Query: 284 KILSGCTAKRVLSLAECLLREGKVQRIKTKNVTVEEGKQADEMMLIGSGVLVCPVVQWDE 343
            +LSGCTAKR L+LAE L+ +G ++ +K  +VTVE+GK+ADEMMLIGSG+ + PV+QWDE
Sbjct: 278 NVLSGCTAKRTLTLAEQLVSKGILKTVKVMDVTVEDGKKADEMMLIGSGIPIRPVIQWDE 337

Query: 344 QVIGDGKEGPITQALLNLIVEDMKSGPPTVRTAVPY 379
           + IG+GKEGPI +ALL+L++EDM+SGPP+VR  VPY
Sbjct: 338 EFIGEGKEGPIAKALLDLLLEDMRSGPPSVRVLVPY 373


>AT3G05190.1 | Symbols:  | D-aminoacid aminotransferase-like
           PLP-dependent enzymes superfamily protein |
           chr3:1471457-1475067 FORWARD LENGTH=555
          Length = 555

 Score = 92.0 bits (227), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 132/267 (49%), Gaps = 22/267 (8%)

Query: 104 DHMVHRGHGVFDTAAIMDGHLYELDQHLDRFLRSASKSGIDPPFDRESVCKILIQT-VSA 162
           D +V  G  V++   I  G +++L++HLDR   SA     D    RE V + + +T ++ 
Sbjct: 282 DSVVQGGDSVWEGLRIYKGKIFKLEEHLDRLFDSAKALAFDNVPAREEVKEAIFRTLITN 341

Query: 163 SQCRKGSLRYWLSAGPG-DFQLSPS----GCYQSVL--YAVVIQDLSLEQIKSRGVKVIT 215
                  +R  L+ G      +SP+    GC   VL  +   + D         G+ ++T
Sbjct: 342 GMFDNTHIRLSLTRGKKVTSGMSPAYNRYGCTLIVLAEWKPPVYD------NEGGIVLVT 395

Query: 216 SSVPIKHPQFATTK--SVNYLPNVLSKMEAEEVGAFAGIWLDDEGFVAEGPNMNVAFVTK 273
           ++     P    +K    N L N+L+K+E+    A   I LD +G+V+E    N+ F+ K
Sbjct: 396 ATTRRNSPNNLDSKIHHNNLLNNILAKIESNNTNAADAIMLDKDGYVSETNATNI-FMVK 454

Query: 274 EKVLIMPYFDKILSGCTAKRVLSLAECLLREGKVQRIKTKNVTVEEGKQADEMMLIGSGV 333
           +  ++ P+ D  L G T   V+   E +++E  +  ++ + +++ E   A+E+   G+  
Sbjct: 455 KGCVLTPHADYCLPGITRATVM---ELVVKENFI--LEERRISLSEFHTANEVWTTGTMG 509

Query: 334 LVCPVVQWDEQVIGDGKEGPITQALLN 360
            + PVV+ D +VIGDGK GP+T+ L N
Sbjct: 510 ELSPVVKIDGRVIGDGKVGPVTRTLQN 536


>AT5G27410.1 | Symbols:  | D-aminoacid aminotransferase-like
           PLP-dependent enzymes superfamily protein |
           chr5:9678821-9682468 FORWARD LENGTH=559
          Length = 559

 Score = 89.0 bits (219), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 22/267 (8%)

Query: 104 DHMVHRGHGVFDTAAIMDGHLYELDQHLDRFLRSASKSGIDPPFDRESVCKILIQT-VSA 162
           D +V  G  V++   I  G +++L++HLDR   SA     +    RE + + + +T ++ 
Sbjct: 279 DSVVQGGDSVWEGLRIYKGKVFKLEEHLDRLSDSAKALAFNNVPTREEIKEAIFRTLITN 338

Query: 163 SQCRKGSLRYWLSAGPG-DFQLSPS----GCYQSVL--YAVVIQDLSLEQIKSRGVKVIT 215
                  +R  L+ G      +SP+    GC   VL  +   + D         G+ ++T
Sbjct: 339 GMFDNTHIRLSLTRGKKVTSGMSPAFNRYGCTLIVLAEWKPPVYD------NDGGIVLVT 392

Query: 216 SSVPIKHPQFATTK--SVNYLPNVLSKMEAEEVGAFAGIWLDDEGFVAEGPNMNVAFVTK 273
           ++     P    +K    N L N+L+K+E+        I LD +GFV+E    N+  V K
Sbjct: 393 ATTRRNSPNNLDSKIHHNNLLNNILAKIESNNANVDDAIMLDKDGFVSETNATNIFMVKK 452

Query: 274 EKVLIMPYFDKILSGCTAKRVLSLAECLLREGKVQRIKTKNVTVEEGKQADEMMLIGSGV 333
           ++VL  P+ D  L G T   V+   E +++E  +  ++ + +++ E   ADE+   G+  
Sbjct: 453 DRVLT-PHADYCLPGITRATVM---ELVVKENFI--LEERRISLSEFHTADEVWTTGTMG 506

Query: 334 LVCPVVQWDEQVIGDGKEGPITQALLN 360
            + PVV+ D +VIG+GK GP+T+ L N
Sbjct: 507 ELSPVVKIDGRVIGEGKVGPVTRRLQN 533


>AT5G27410.2 | Symbols:  | D-aminoacid aminotransferase-like
           PLP-dependent enzymes superfamily protein |
           chr5:9676362-9682468 FORWARD LENGTH=936
          Length = 936

 Score = 88.6 bits (218), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 22/267 (8%)

Query: 104 DHMVHRGHGVFDTAAIMDGHLYELDQHLDRFLRSASKSGIDPPFDRESVCKILIQT-VSA 162
           D +V  G  V++   I  G +++L++HLDR   SA     +    RE + + + +T ++ 
Sbjct: 656 DSVVQGGDSVWEGLRIYKGKVFKLEEHLDRLSDSAKALAFNNVPTREEIKEAIFRTLITN 715

Query: 163 SQCRKGSLRYWLSAGPG-DFQLSPS----GCYQSVL--YAVVIQDLSLEQIKSRGVKVIT 215
                  +R  L+ G      +SP+    GC   VL  +   + D         G+ ++T
Sbjct: 716 GMFDNTHIRLSLTRGKKVTSGMSPAFNRYGCTLIVLAEWKPPVYD------NDGGIVLVT 769

Query: 216 SSVPIKHPQFATTK--SVNYLPNVLSKMEAEEVGAFAGIWLDDEGFVAEGPNMNVAFVTK 273
           ++     P    +K    N L N+L+K+E+        I LD +GFV+E    N+  V K
Sbjct: 770 ATTRRNSPNNLDSKIHHNNLLNNILAKIESNNANVDDAIMLDKDGFVSETNATNIFMVKK 829

Query: 274 EKVLIMPYFDKILSGCTAKRVLSLAECLLREGKVQRIKTKNVTVEEGKQADEMMLIGSGV 333
           ++VL  P+ D  L G T   V+   E +++E  +  ++ + +++ E   ADE+   G+  
Sbjct: 830 DRVLT-PHADYCLPGITRATVM---ELVVKENFI--LEERRISLSEFHTADEVWTTGTMG 883

Query: 334 LVCPVVQWDEQVIGDGKEGPITQALLN 360
            + PVV+ D +VIG+GK GP+T+ L N
Sbjct: 884 ELSPVVKIDGRVIGEGKVGPVTRRLQN 910