Miyakogusa Predicted Gene

Lj0g3v0248479.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0248479.1 Non Chatacterized Hit- tr|C6TAN4|C6TAN4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.32414
PE,96.57,0,ELONGATNFCT,Elongation factor, GTP-binding domain; no
description,NULL; P-loop containing nucleoside,CUFF.16281.1
         (466 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G04170.1 | Symbols: EIF2 GAMMA | eukaryotic translation initi...   872   0.0  
AT4G18330.2 | Symbols:  | Translation elongation factor EF1A/ini...   779   0.0  
AT2G18720.1 | Symbols:  | Translation elongation factor EF1A/ini...   742   0.0  
AT4G18330.1 | Symbols:  | Translation elongation factor EF1A/ini...   480   e-135
AT4G02930.1 | Symbols:  | GTP binding Elongation factor Tu famil...    74   3e-13
AT4G20360.1 | Symbols: ATRAB8D, ATRABE1B, RABE1b | RAB GTPase ho...    72   7e-13

>AT1G04170.1 | Symbols: EIF2 GAMMA | eukaryotic translation
           initiation factor 2 gamma subunit | chr1:1097423-1099702
           FORWARD LENGTH=465
          Length = 465

 Score =  872 bits (2252), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/465 (89%), Positives = 444/465 (95%), Gaps = 1/465 (0%)

Query: 1   MSR-KGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVR 59
           MSR KGL EQDL KLDV  LHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVR
Sbjct: 1   MSRNKGLAEQDLKKLDVTVLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVR 60

Query: 60  FKNELERNITIKLGYANAKIYKCEDERCPRPMSYKAYGSGKEDSPMCDVPGFENSKMKLL 119
           FKNELERNITIKLGYANAKIYKCEDE+CPRPM YKAYGSGKED+P CDVPGFENSKMKLL
Sbjct: 61  FKNELERNITIKLGYANAKIYKCEDEKCPRPMCYKAYGSGKEDTPNCDVPGFENSKMKLL 120

Query: 120 RHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIII 179
           RHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE+CPQPQTSEHLAAVEIM+L+HIII
Sbjct: 121 RHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANETCPQPQTSEHLAAVEIMQLKHIII 180

Query: 180 LQNKVDLIQENVAINQHEAIQKFIQGTVAGGAPVVPISAQLKYNIDVVCEYIVKKIPIPE 239
           LQNK+DLIQENVAINQHEAIQKFI  TVA  AP+VP+SAQLKYNIDVVCEYIVKKIPIPE
Sbjct: 181 LQNKIDLIQENVAINQHEAIQKFIMNTVADAAPIVPVSAQLKYNIDVVCEYIVKKIPIPE 240

Query: 240 RNFISPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKFNQFIEVRPGIIVKDDSG 299
           RNF+SPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVL+ NQ IE+RPGI+ KD+ G
Sbjct: 241 RNFVSPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLRVNQLIEIRPGIVTKDERG 300

Query: 300 NIRCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEV 359
           N +CTPIYSRI+SLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGE+GSLP+V
Sbjct: 301 NSKCTPIYSRIISLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEIGSLPDV 360

Query: 360 FVELEVNFFLLRRLLGVRTKGSERQGKVTKLTKTEMLMLNIGSMSTGARVIAVKNDLAKL 419
           FVELEVNFFLLRRLLGVRTKGSE+QGKV+KLTK E+LMLNIGSMSTGA+V+ VK DLAKL
Sbjct: 361 FVELEVNFFLLRRLLGVRTKGSEKQGKVSKLTKGEILMLNIGSMSTGAKVVGVKVDLAKL 420

Query: 420 QLTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGLTLDVPPAPL 464
           QLT+PVCTSKGEK+ALSRRVEKHWRLIGWGQIQAG T++VPP+P 
Sbjct: 421 QLTAPVCTSKGEKVALSRRVEKHWRLIGWGQIQAGTTIEVPPSPF 465


>AT4G18330.2 | Symbols:  | Translation elongation factor
           EF1A/initiation factor IF2gamma family protein |
           chr4:10126747-10128587 FORWARD LENGTH=471
          Length = 471

 Score =  779 bits (2011), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/461 (81%), Positives = 413/461 (89%)

Query: 4   KGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNE 63
           KGL EQDL+KLDV KLHPL PEVISRQATINIGTIGHVAHGKST+VKAISGVQTVRFKNE
Sbjct: 11  KGLAEQDLTKLDVTKLHPLFPEVISRQATINIGTIGHVAHGKSTIVKAISGVQTVRFKNE 70

Query: 64  LERNITIKLGYANAKIYKCEDERCPRPMSYKAYGSGKEDSPMCDVPGFENSKMKLLRHVS 123
           LERNITIKLGYANAKIYKCED++CPRPM YK+YGSGKED+P CDVPGFEN KM L RHVS
Sbjct: 71  LERNITIKLGYANAKIYKCEDDKCPRPMCYKSYGSGKEDNPTCDVPGFENCKMTLRRHVS 130

Query: 124 FVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNK 183
            VDCPGHDILMATMLNGAAI+DGALLLIAANESCPQPQT+EHLA+V++MRL+HIIILQNK
Sbjct: 131 CVDCPGHDILMATMLNGAAIVDGALLLIAANESCPQPQTAEHLASVDMMRLKHIIILQNK 190

Query: 184 VDLIQENVAINQHEAIQKFIQGTVAGGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFI 243
           +DLI E  A  QHEAIQKFI  T A  AP+VP+SAQLKYNIDVV EYIVKKIPIP R+F+
Sbjct: 191 IDLINEKAATEQHEAIQKFITNTNAEDAPIVPVSAQLKYNIDVVSEYIVKKIPIPVRDFV 250

Query: 244 SPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKFNQFIEVRPGIIVKDDSGNIRC 303
           SPP MIVIRSFDVNKPG    E+KGGVAGGSIL+GVLK NQ IE+RPGI  KD+ GN +C
Sbjct: 251 SPPKMIVIRSFDVNKPGSAGHEMKGGVAGGSILQGVLKVNQLIEIRPGITGKDEHGNSKC 310

Query: 304 TPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVEL 363
           TPIYSRI SLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGE+G+LP+VFVEL
Sbjct: 311 TPIYSRITSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEMGTLPDVFVEL 370

Query: 364 EVNFFLLRRLLGVRTKGSERQGKVTKLTKTEMLMLNIGSMSTGARVIAVKNDLAKLQLTS 423
           EV++ LL RL+GVRTK  E+Q KV+KLTK E+LM+NIGSMSTGA+VI VK D+ KLQLTS
Sbjct: 371 EVSYQLLTRLIGVRTKEKEKQMKVSKLTKEEILMVNIGSMSTGAKVIGVKKDMVKLQLTS 430

Query: 424 PVCTSKGEKIALSRRVEKHWRLIGWGQIQAGLTLDVPPAPL 464
           PVCT+ GEK+ALSRRV++HWRLIG GQI AG T+DVPP P 
Sbjct: 431 PVCTTIGEKVALSRRVDRHWRLIGKGQIMAGTTIDVPPPPF 471


>AT2G18720.1 | Symbols:  | Translation elongation factor
           EF1A/initiation factor IF2gamma family protein |
           chr2:8114920-8116759 REVERSE LENGTH=470
          Length = 470

 Score =  742 bits (1916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/466 (76%), Positives = 414/466 (88%), Gaps = 3/466 (0%)

Query: 1   MSR-KGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVR 59
           MS+ KGL EQDLSKLDVA+LHPLSPEVISRQATINIGTIGHVAHGKST+VKA+SGV TV+
Sbjct: 6   MSKNKGLAEQDLSKLDVAQLHPLSPEVISRQATINIGTIGHVAHGKSTIVKAVSGVHTVK 65

Query: 60  FKNELERNITIKLGYANAKIYKCEDERCPRPMSYKAYGSGKEDSPMCDVPGFENSKMKLL 119
           FK+ELERNITIKLGYANAKIYKCE  +CPRP++YK++GSGKED+P CDV G E  KMKLL
Sbjct: 66  FKSELERNITIKLGYANAKIYKCE--KCPRPVAYKSFGSGKEDNPSCDVSGHEKYKMKLL 123

Query: 120 RHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIII 179
           RHVSFVDCPGHDILMATMLNGAAIMDGALL+IAANE+CPQPQT+EHLA+V++M L+ III
Sbjct: 124 RHVSFVDCPGHDILMATMLNGAAIMDGALLIIAANETCPQPQTAEHLASVDMMHLKDIII 183

Query: 180 LQNKVDLIQENVAINQHEAIQKFIQGTVAGGAPVVPISAQLKYNIDVVCEYIVKKIPIPE 239
           +QNK+DLIQEN AI QHE IQ+FI  T A GAP+VP+SAQLKYNIDV+CEYIVKKIP+P 
Sbjct: 184 IQNKIDLIQENEAIKQHEDIQRFITNTNAEGAPIVPVSAQLKYNIDVLCEYIVKKIPLPV 243

Query: 240 RNFISPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKFNQFIEVRPGIIVKDDSG 299
           R+F+SPP MIVIRSFDVNKPG + D +KGGVAGGSIL+GVLK    IE+RPGI  KD++G
Sbjct: 244 RDFVSPPRMIVIRSFDVNKPGSDYDGMKGGVAGGSILQGVLKVGHIIEIRPGITRKDENG 303

Query: 300 NIRCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEV 359
           + +CTPIY+RI SLYAEQNELQFAVPGGLIG+GT+MDPTLTR DRLVGQVLGE+G+LP+V
Sbjct: 304 DTKCTPIYTRITSLYAEQNELQFAVPGGLIGIGTSMDPTLTRGDRLVGQVLGEIGTLPDV 363

Query: 360 FVELEVNFFLLRRLLGVRTKGSERQGKVTKLTKTEMLMLNIGSMSTGARVIAVKNDLAKL 419
           +VELEV+F LL RL+GV+TK +ERQ +V+KL K E+LMLNIGSMSTGA VI VK D+ K+
Sbjct: 364 YVELEVSFQLLTRLIGVKTKETERQMRVSKLVKGEILMLNIGSMSTGAMVIGVKKDMVKV 423

Query: 420 QLTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGLTLDVPPAPLL 465
            LT PVCTS GEK+A+SRRV++HWRLIG GQI+AG T+ +P  P L
Sbjct: 424 NLTLPVCTSIGEKVAISRRVDRHWRLIGRGQIEAGTTIFIPSPPSL 469


>AT4G18330.1 | Symbols:  | Translation elongation factor
           EF1A/initiation factor IF2gamma family protein |
           chr4:10126747-10128039 FORWARD LENGTH=284
          Length = 284

 Score =  480 bits (1235), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 229/274 (83%), Positives = 248/274 (90%)

Query: 4   KGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNE 63
           KGL EQDL+KLDV KLHPL PEVISRQATINIGTIGHVAHGKST+VKAISGVQTVRFKNE
Sbjct: 11  KGLAEQDLTKLDVTKLHPLFPEVISRQATINIGTIGHVAHGKSTIVKAISGVQTVRFKNE 70

Query: 64  LERNITIKLGYANAKIYKCEDERCPRPMSYKAYGSGKEDSPMCDVPGFENSKMKLLRHVS 123
           LERNITIKLGYANAKIYKCED++CPRPM YK+YGSGKED+P CDVPGFEN KM L RHVS
Sbjct: 71  LERNITIKLGYANAKIYKCEDDKCPRPMCYKSYGSGKEDNPTCDVPGFENCKMTLRRHVS 130

Query: 124 FVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNK 183
            VDCPGHDILMATMLNGAAI+DGALLLIAANESCPQPQT+EHLA+V++MRL+HIIILQNK
Sbjct: 131 CVDCPGHDILMATMLNGAAIVDGALLLIAANESCPQPQTAEHLASVDMMRLKHIIILQNK 190

Query: 184 VDLIQENVAINQHEAIQKFIQGTVAGGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFI 243
           +DLI E  A  QHEAIQKFI  T A  AP+VP+SAQLKYNIDVV EYIVKKIPIP R+F+
Sbjct: 191 IDLINEKAATEQHEAIQKFITNTNAEDAPIVPVSAQLKYNIDVVSEYIVKKIPIPVRDFV 250

Query: 244 SPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILR 277
           SPP MIVIRSFDVNKPG    E+KGGVAGGSIL+
Sbjct: 251 SPPKMIVIRSFDVNKPGSAGHEMKGGVAGGSILQ 284


>AT4G02930.1 | Symbols:  | GTP binding Elongation factor Tu family
           protein | chr4:1295751-1298354 REVERSE LENGTH=454
          Length = 454

 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 108/458 (23%), Positives = 180/458 (39%), Gaps = 105/458 (22%)

Query: 33  INIGTIGHVAHGKSTVVKAISGV-------QTVRFKN------ELERNITIKLGYANAKI 79
           +N+GTIGHV HGK+T+  AI+ V       + + F        E +R ITI   +     
Sbjct: 68  VNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHVE--- 124

Query: 80  YKCEDERCPRPMSYKAYGSGKEDSPMCDVPGFENSKMKLLRHVSFVDCPGHDILMATMLN 139
                                          +E +K    RH + VDCPGH   +  M+ 
Sbjct: 125 -------------------------------YETAK----RHYAHVDCPGHADYVKNMIT 149

Query: 140 GAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQE-------NVA 192
           GAA MDG +L+++  +  P PQT EH+     + +  ++   NKVD++ +        + 
Sbjct: 150 GAAQMDGGILVVSGPDG-PMPQTKEHILLARQVGVPSLVCFLNKVDVVDDPELLELVEME 208

Query: 193 INQHEAIQKF-------IQGT----VAGGAPVVPISAQLKYNIDVVCEYIVKKIPIPERN 241
           + +  +  KF       I+G+    + G    +   A LK  +D V EY    IP P R 
Sbjct: 209 LRELLSFYKFPGDDIPIIRGSALSALQGTNDEIGRQAILKL-MDAVDEY----IPDPVRV 263

Query: 242 FISPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKFNQFIEV---RPGIIVKDDS 298
              P  M +   F +          +G VA G I +GV+K  + +E+   R G +     
Sbjct: 264 LDKPFLMPIEDVFSIQG--------RGTVATGRIEQGVIKVGEEVEILGLREGGV----- 310

Query: 299 GNIRCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPE 358
                 P+ S +  +   +  L     G  +G+   +   L R D   G V+ + GS  +
Sbjct: 311 ------PLKSTVTGVEMFKKILDNGQAGDNVGL---LLRGLKREDIQRGMVIAKPGSC-K 360

Query: 359 VFVELEVNFFLLRRLLGVRTKGSERQGKVTKLTKTEMLMLNIGSMSTGARVIAVKNDLAK 418
            + + E   ++L +  G R        +     +T  +   +        V+   N  A 
Sbjct: 361 TYKKFEAEIYVLTKDEGGRHTAFFSNYRPQFYLRTADITGKVELPENVKMVMPGDNVTAV 420

Query: 419 LQLTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGLT 456
            +L  PV    G++ AL     +  R +G G +   +T
Sbjct: 421 FELIMPVPLETGQRFAL----REGGRTVGAGVVSKVMT 454


>AT4G20360.1 | Symbols: ATRAB8D, ATRABE1B, RABE1b | RAB GTPase
           homolog E1B | chr4:10990036-10991466 FORWARD LENGTH=476
          Length = 476

 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 155/374 (41%), Gaps = 78/374 (20%)

Query: 29  RQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDERCP 88
           ++  +NIGTIGHV HGK+T+  A+                T+ L    + + K  DE   
Sbjct: 76  KKPHVNIGTIGHVDHGKTTLTAAL----------------TMALASIGSSVAKKYDEIDA 119

Query: 89  RPMSYKAYGSGKEDSPMCDVPGFENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGAL 148
            P   +A G     + +     +E       RH + VDCPGH   +  M+ GAA MDGA+
Sbjct: 120 APEE-RARGITINTATV----EYETEN----RHYAHVDCPGHADYVKNMITGAAQMDGAI 170

Query: 149 LLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAINQHEAIQKFIQGTVA 208
           L+++  +  P PQT EH+   + + +  +++  NK D + +   +   E   + +  +  
Sbjct: 171 LVVSGADG-PMPQTKEHILLAKQVGVPDMVVFLNKEDQVDDAELLELVELEVRELLSSYE 229

Query: 209 GGAPVVPI---SAQLKYN----------------------IDVVCEYIVKKIPIPERNFI 243
                +PI   SA L                         +D V +Y    IPIP+R   
Sbjct: 230 FNGDDIPIISGSALLAVETLTENPKVKRGDNKWVDKIYELMDAVDDY----IPIPQRQTE 285

Query: 244 SPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKFNQFIEVRPGIIVKDDSGNIRC 303
            P  + V   F +          +G VA G + RG +K  + +++            +R 
Sbjct: 286 LPFLLAVEDVFSITG--------RGTVATGRVERGTVKVGETVDLV----------GLRE 327

Query: 304 TPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVEL 363
           T  Y+ +  +   Q  L  A+ G  +G+   +   + +AD   G VL + GS+     + 
Sbjct: 328 TRSYT-VTGVEMFQKILDEALAGDNVGL---LLRGIQKADIQRGMVLAKPGSITP-HTKF 382

Query: 364 EVNFFLLRRLLGVR 377
           E   ++L++  G R
Sbjct: 383 EAIIYVLKKEEGGR 396