Miyakogusa Predicted Gene

Lj0g3v0248049.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0248049.1 Non Chatacterized Hit- tr|B4FYS0|B4FYS0_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,38.24,6e-17,seg,NULL,CUFF.16193.1
         (239 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G19330.1 | Symbols:  | Protein of unknown function (DUF677) |...    87   7e-18
AT3G19330.2 | Symbols:  | Protein of unknown function (DUF677) |...    87   7e-18
AT3G19330.3 | Symbols:  | Protein of unknown function (DUF677) |...    87   8e-18
AT3G19250.1 | Symbols:  | Protein of unknown function (DUF677) |...    85   4e-17

>AT3G19330.1 | Symbols:  | Protein of unknown function (DUF677) |
           chr3:6699423-6700772 FORWARD LENGTH=382
          Length = 382

 Score = 87.4 bits (215), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 52/122 (42%), Positives = 77/122 (63%), Gaps = 8/122 (6%)

Query: 45  VLTQVLQPDPDSVREALATAKPTSATVTRLVSSYFDHSQNASHLCLLLCGSIHRAR-QIY 103
           +L+QVLQP+ + V+EA+   K T  T+T LVS+YF HS++A+ LCL L  ++H AR  +Y
Sbjct: 88  LLSQVLQPNKECVQEAIRHVKQT--TLTNLVSTYFQHSEDATRLCLNLYQNVHSARHHLY 145

Query: 104 APLSDLIGIL--DPSSSLSQPQCDRAYDLFLQFDRHENPFLFPH---FQDLRRSFSNLRS 158
            PL DL  I   D   ++ +  CD A+D+FL+ D  ENPF  P    F+D +  FS L+ 
Sbjct: 146 TPLLDLFNIFPGDSLPAIDESLCDLAFDVFLKLDTFENPFSSPESYSFRDTQLCFSQLKH 205

Query: 159 HI 160
           ++
Sbjct: 206 NL 207


>AT3G19330.2 | Symbols:  | Protein of unknown function (DUF677) |
           chr3:6699423-6700772 FORWARD LENGTH=349
          Length = 349

 Score = 87.4 bits (215), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 52/122 (42%), Positives = 77/122 (63%), Gaps = 8/122 (6%)

Query: 45  VLTQVLQPDPDSVREALATAKPTSATVTRLVSSYFDHSQNASHLCLLLCGSIHRAR-QIY 103
           +L+QVLQP+ + V+EA+   K T  T+T LVS+YF HS++A+ LCL L  ++H AR  +Y
Sbjct: 88  LLSQVLQPNKECVQEAIRHVKQT--TLTNLVSTYFQHSEDATRLCLNLYQNVHSARHHLY 145

Query: 104 APLSDLIGIL--DPSSSLSQPQCDRAYDLFLQFDRHENPFLFPH---FQDLRRSFSNLRS 158
            PL DL  I   D   ++ +  CD A+D+FL+ D  ENPF  P    F+D +  FS L+ 
Sbjct: 146 TPLLDLFNIFPGDSLPAIDESLCDLAFDVFLKLDTFENPFSSPESYSFRDTQLCFSQLKH 205

Query: 159 HI 160
           ++
Sbjct: 206 NL 207


>AT3G19330.3 | Symbols:  | Protein of unknown function (DUF677) |
           chr3:6699423-6700776 FORWARD LENGTH=345
          Length = 345

 Score = 87.4 bits (215), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 52/122 (42%), Positives = 77/122 (63%), Gaps = 8/122 (6%)

Query: 45  VLTQVLQPDPDSVREALATAKPTSATVTRLVSSYFDHSQNASHLCLLLCGSIHRAR-QIY 103
           +L+QVLQP+ + V+EA+   K T  T+T LVS+YF HS++A+ LCL L  ++H AR  +Y
Sbjct: 88  LLSQVLQPNKECVQEAIRHVKQT--TLTNLVSTYFQHSEDATRLCLNLYQNVHSARHHLY 145

Query: 104 APLSDLIGIL--DPSSSLSQPQCDRAYDLFLQFDRHENPFLFPH---FQDLRRSFSNLRS 158
            PL DL  I   D   ++ +  CD A+D+FL+ D  ENPF  P    F+D +  FS L+ 
Sbjct: 146 TPLLDLFNIFPGDSLPAIDESLCDLAFDVFLKLDTFENPFSSPESYSFRDTQLCFSQLKH 205

Query: 159 HI 160
           ++
Sbjct: 206 NL 207


>AT3G19250.1 | Symbols:  | Protein of unknown function (DUF677) |
           chr3:6666842-6668008 REVERSE LENGTH=360
          Length = 360

 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/117 (41%), Positives = 71/117 (60%), Gaps = 6/117 (5%)

Query: 46  LTQVLQPDPDSVREALATAKPTSATVTRLVSSYFDHSQNASHLCLLLCGSIHRAR-QIYA 104
           L+Q L+P+ +SV+EAL+       T+T LVS+YF HS++A+  CL L  ++H AR  +Y 
Sbjct: 70  LSQELRPNNESVQEALSLRHAKQTTLTNLVSTYFQHSEDATRFCLNLYQNVHSARCHLYT 129

Query: 105 PLSDLIGIL--DPSSSLSQPQCDRAYDLFLQFDRHENPFLFPH---FQDLRRSFSNL 156
           PL DL  I   D  S++ +  C+ A+D+FL+ D  ENPF  P    FQD +  F  L
Sbjct: 130 PLLDLFNIFPRDSHSAIDESFCNLAFDVFLKLDTFENPFASPESHSFQDTQLCFYQL 186