Miyakogusa Predicted Gene

Lj0g3v0247429.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0247429.1 Non Chatacterized Hit- tr|K4C4X5|K4C4X5_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,26.98,0.000000003,coiled-coil,NULL; seg,NULL,gene.g19270.t1.1
         (627 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G25610.1 | Symbols:  | C2H2-like zinc finger protein | chr4:1...   280   2e-75
AT4G25610.2 | Symbols:  | C2H2-like zinc finger protein | chr4:1...   247   2e-65

>AT4G25610.1 | Symbols:  | C2H2-like zinc finger protein |
           chr4:13063801-13066860 FORWARD LENGTH=586
          Length = 586

 Score =  280 bits (716), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 223/666 (33%), Positives = 314/666 (47%), Gaps = 143/666 (21%)

Query: 19  ERIDTDAMIRTDNAIRQVAGTEPVIYFPRAGVNPVQWIQ--------------------- 57
           E +  D     D  IR+  G +P + FPR    PVQ  Q                     
Sbjct: 2   ELVKQDGNDSLDMLIRRAVGKDPFLSFPRPENTPVQLFQLLHTLERPGWPLLTPLKIQMQ 61

Query: 58  ------------------------------DSTKVRDLLGAYWDKLSVEEAKEVVSFENV 87
                                         D  K RD LGA+W+KLS  +AKE++S +++
Sbjct: 62  KCEKCSREFCSPVNFRRHNRMHRRQRKPEKDFGKERDALGAFWNKLSATDAKEILSVKSM 121

Query: 88  MLKEVPGSSILESLMTLVQKQGFSLLPQYYLRAGAALLDIVQSKPSSFPISSLELFSILD 147
           ML+++PG+S+   LM+L++K G++ LPQYYLRAG+ LLD++Q++P   PISS ELFSILD
Sbjct: 122 MLEDIPGASVESGLMSLIEKPGYTALPQYYLRAGSGLLDLLQARPPRLPISSQELFSILD 181

Query: 148 DASEKTCLWGTAVSMQKHLLDGGAGKIGLEPENVVAWTSFLLEQKLVEAWLSDRDAEALR 207
           DASEKT L   A  MQK++ DG  GK  LE +NVVA  SFLLEQ+L++AWL+D+DAEALR
Sbjct: 182 DASEKTFLSSEAAPMQKYIFDGEIGKTVLEAKNVVACASFLLEQRLIKAWLADKDAEALR 241

Query: 208 CQKQLVEEEEAAQKRYQAEILXXXXXXXXXXXXXXXXXXXHKDVEEIKKNIDSAVKDLSR 267
           CQ  LVEEEEAA++R                          KD +E +       +  + 
Sbjct: 242 CQNLLVEEEEAARRRKAEL--LERKKRKKLRQKEQREKDQKKDAKEDESTTSEEQQYPAE 299

Query: 268 AEASLD-RYNSEGHDLDTFA-DNNTPLHVPFQCSDTNEGIDEITQSRHDFGSD--QNIER 323
             + L    +SE    D+   D+++ L  P Q  +TN G +  TQ     G D  QN+ER
Sbjct: 300 PSSPLSVASDSEAQTPDSLPIDDSSSLEEP-QVLETNNGRNSETQVPMVDGLDNGQNMER 358

Query: 324 QSARGHNHRRSAVARWQEPPKLQWAVANGLHKNLHTP----ISKNEVNTQKRIGREQKAV 379
           +S R    R             Q  + NG H + H P    + KN  N   R        
Sbjct: 359 RSGRRQMQRS------------QQGMPNGFHAD-HAPNLGGMRKNGTNRDAR-------- 397

Query: 380 ATVNGSKAWSQKPKSEIDRVVLKTKAEKEPDLVKNHVVLIGSISVNLGNCRKSEGNVVES 439
              N +K WS+  KS+  +++ +  A  + D  K+   ++GS+SV++ N    E N    
Sbjct: 398 --ANTTKVWSR--KSDNPKLISQHAAVTQQDQTKSSEFIVGSLSVSIRNS--GEHN---- 447

Query: 440 QEDCMVKNVAEQNSSQDKPMEPDLVVTGNNQLKVRHWRPVIQLETKDTLPVQNGGTGVDV 499
           Q  C       +   + K +E   V   + Q  V+ WR           PV + G     
Sbjct: 448 QTKC------SEGERRTKTVE---VKPASEQSTVKIWR-----------PVSSQGRKTST 487

Query: 500 VHGNGDCRN-LSGPTSFENNNSHPEGRVNRGSLQSSIHEAKAFLAQRWKEALLSNHVKLV 558
           V+GN D  +  S PT+ E  N+H        SLQ + HEAKAFLA+RWKEA  + HV LV
Sbjct: 488 VNGNTDKEDKRSNPTTPEVKNAH------HISLQFNNHEAKAFLAKRWKEATSAEHVTLV 541

Query: 559 VSPDSKSPRCQEIQHSNIAACNSSDERCNIIANADNRLPATXXXXXXXXXXXXENGNKTK 618
           +S           Q ++I+  N++ E  N +  A ++L               E G K K
Sbjct: 542 LS-----------QETDISG-NNTHESSNGVITARSKL-----------RTKAEKGTKVK 578

Query: 619 YIPKQR 624
           Y+PKQR
Sbjct: 579 YVPKQR 584


>AT4G25610.2 | Symbols:  | C2H2-like zinc finger protein |
           chr4:13063801-13066970 FORWARD LENGTH=571
          Length = 571

 Score =  247 bits (630), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 195/586 (33%), Positives = 273/586 (46%), Gaps = 120/586 (20%)

Query: 19  ERIDTDAMIRTDNAIRQVAGTEPVIYFPRAGVNPVQWIQ--------------------- 57
           E +  D     D  IR+  G +P + FPR    PVQ  Q                     
Sbjct: 2   ELVKQDGNDSLDMLIRRAVGKDPFLSFPRPENTPVQLFQLLHTLERPGWPLLTPLKIQMQ 61

Query: 58  ------------------------------DSTKVRDLLGAYWDKLSVEEAKEVVSFENV 87
                                         D  K RD LGA+W+KLS  +AKE++S +++
Sbjct: 62  KCEKCSREFCSPVNFRRHNRMHRRQRKPEKDFGKERDALGAFWNKLSATDAKEILSVKSM 121

Query: 88  MLKEVPGSSILESLMTLVQKQGFSLLPQYYLRAGAALLDIVQSKPSSFPISSLELFSILD 147
           ML+++PG+S+   LM+L++K G++ LPQYYLRAG+ LLD++Q++P   PISS ELFSILD
Sbjct: 122 MLEDIPGASVESGLMSLIEKPGYTALPQYYLRAGSGLLDLLQARPPRLPISSQELFSILD 181

Query: 148 DASEKTCLWGTAVSMQKHLLDGGAGKIGLEPENVVAWTSFLLEQKLVEAWLSDRDAEALR 207
           DASEKT L   A  MQK++ DG  GK  LE +NVVA  SFLLEQ+L++AWL+D+DAEALR
Sbjct: 182 DASEKTFLSSEAAPMQKYIFDGEIGKTVLEAKNVVACASFLLEQRLIKAWLADKDAEALR 241

Query: 208 CQKQLVEEEEAAQKRYQAEILXXXXXXXXXXXXXXXXXXXHKDVEEIKKNIDSAVKDLSR 267
           CQ  LVEEEEAA++R                          KD +E +       +  + 
Sbjct: 242 CQNLLVEEEEAARRRKAEL--LERKKRKKLRQKEQREKDQKKDAKEDESTTSEEQQYPAE 299

Query: 268 AEASLD-RYNSEGHDLDTFA-DNNTPLHVPFQCSDTNEGIDEITQSRHDFGSD--QNIER 323
             + L    +SE    D+   D+++ L  P Q  +TN G +  TQ     G D  QN+ER
Sbjct: 300 PSSPLSVASDSEAQTPDSLPIDDSSSLEEP-QVLETNNGRNSETQVPMVDGLDNGQNMER 358

Query: 324 QSARGHNHRRSAVARWQEPPKLQWAVANGLHKNLHTP----ISKNEVNTQKRIGREQKAV 379
           +S R    R             Q  + NG H + H P    + KN  N   R        
Sbjct: 359 RSGRRQMQRS------------QQGMPNGFHAD-HAPNLGGMRKNGTNRDAR-------- 397

Query: 380 ATVNGSKAWSQKPKSEIDRVVLKTKAEKEPDLVKNHVVLIGSISVNLGNCRKSEGNVVES 439
              N +K WS+  KS+  +++ +  A  + D  K+   ++GS+SV++ N    E N  + 
Sbjct: 398 --ANTTKVWSR--KSDNPKLISQHAAVTQQDQTKSSEFIVGSLSVSIRNS--GEHNQTKC 451

Query: 440 QEDCMVKNVAEQNSSQDKPMEPDLVVTGNNQLKVRHWRPVIQLETKDTLPVQNGGTGVDV 499
            E        E             V   + Q  V+ WR           PV + G     
Sbjct: 452 SEGERRTKTVE-------------VKPASEQSTVKIWR-----------PVSSQGRKTST 487

Query: 500 VHGNGDCRN-LSGPTSFENNNSHPEGRVNRGSLQSSIHEAKAFLAQ 544
           V+GN D  +  S PT+ E  N+H        SLQ + HEAKAFLA+
Sbjct: 488 VNGNTDKEDKRSNPTTPEVKNAH------HISLQFNNHEAKAFLAK 527