Miyakogusa Predicted Gene

Lj0g3v0246889.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0246889.1 tr|G7KB58|G7KB58_MEDTR Putativ eribonuclease P
OS=Medicago truncatula GN=MTR_5g038970 PE=4 SV=1,72.12,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; ALDO/KETO REDUCTASE,Aldo/keto reductase;
DUF304,Bacterial PH dom,CUFF.16120.1
         (195 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G14345.1 | Symbols:  | NAD(P)-linked oxidoreductase superfami...   202   8e-53

>AT1G14345.1 | Symbols:  | NAD(P)-linked oxidoreductase superfamily
           protein | chr1:4899176-4899766 FORWARD LENGTH=196
          Length = 196

 Score =  202 bits (515), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 112/196 (57%), Positives = 127/196 (64%), Gaps = 1/196 (0%)

Query: 1   MACTSFPSPPTTVAAVNHHTLQPPSTSLSPCSSFXXXXXXXXXXXXXXXVSSPTNKPAGT 60
           MA +S   P T V +V   +L   +T   P SS                ++S +   +  
Sbjct: 1   MAASSSIPPSTAVTSVVRKSLLLSTTFSFPASSLSPSTKLPQRHIQRLLLASSSASASTV 60

Query: 61  TTTQKPAG-ETVFFDGGAHYGDLVANXXXXXXXXXXXXXXAAVSRALFLRYRFTNFRVSV 119
            +  KPA  ETV+FDGGAHYGDL+AN              AAVSRA  LRYRFTN RV+V
Sbjct: 61  PSDSKPAKKETVYFDGGAHYGDLLANLILGLTILWLPLTLAAVSRAFNLRYRFTNLRVTV 120

Query: 120 ISGFTGQDRSDFSYKVIKDVQVVPRFIGEWGDIVITLKDGTKVDLRSVPKFREIAKYCLS 179
           ISG TG DRSDFSYKVIKDVQVVPRFIGEWGDI+ITLKDGTKVDLRSVPKFREIAKYCLS
Sbjct: 121 ISGLTGDDRSDFSYKVIKDVQVVPRFIGEWGDIIITLKDGTKVDLRSVPKFREIAKYCLS 180

Query: 180 MAKESQDLNETGPKGF 195
           MA +   L E+G KGF
Sbjct: 181 MADQPAVLKESGAKGF 196