Miyakogusa Predicted Gene

Lj0g3v0246559.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0246559.1 Non Chatacterized Hit- tr|B9RW89|B9RW89_RICCO
Acyl-CoA thioesterase, putative OS=Ricinus communis
GN,44.09,1e-18,THIOESTERASE SUPERFAMILY MEMBER-RELATED,NULL; no
description,NULL; Thioesterase/thiol ester dehydras,CUFF.16101.1
         (161 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G29590.1 | Symbols:  | Thioesterase superfamily protein | chr...   197   2e-51
AT1G04290.1 | Symbols:  | Thioesterase superfamily protein | chr...    91   3e-19
AT3G16175.1 | Symbols:  | Thioesterase superfamily protein | chr...    77   6e-15
AT1G52191.1 | Symbols:  | Thioesterase superfamily protein | chr...    56   9e-09

>AT2G29590.1 | Symbols:  | Thioesterase superfamily protein |
           chr2:12654602-12655432 REVERSE LENGTH=158
          Length = 158

 Score =  197 bits (502), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 102/163 (62%), Positives = 121/163 (74%), Gaps = 8/163 (4%)

Query: 1   MEKAREMLQPKLNQEESDAVSRLPSAPSIRT--GDNACFYEFFTLTGIRVDRVQPGFITC 58
           MEK  E LQ       SD V     AP +    G+   FYE F+L GIRV+RV+PGFI+C
Sbjct: 2   MEKIMEYLQL------SDEVVDDGEAPRVEEFLGEGKSFYENFSLRGIRVNRVEPGFISC 55

Query: 59  SFKVPPRLADRNGKLASGTIATLVDVVGGAVIHEEGLPMHVSVDMSISFLSTANVGDELE 118
           SFKVP RL DR+  LA+G IA LVD VGGA++H EGLPM VSVDMSI+FLS A +G+ELE
Sbjct: 56  SFKVPLRLTDRDKNLANGAIANLVDEVGGALVHGEGLPMSVSVDMSIAFLSKAKLGEELE 115

Query: 119 ITSRLLGRKGGYSGTIVVLKNKATGELIAEGRHSLFGRHKSKM 161
           ITSRLLG +GGY GTIVV++NK TGE+IAEGRHS+FGR  SK+
Sbjct: 116 ITSRLLGERGGYKGTIVVVRNKMTGEIIAEGRHSMFGRQASKL 158


>AT1G04290.1 | Symbols:  | Thioesterase superfamily protein |
           chr1:1147721-1148352 REVERSE LENGTH=155
          Length = 155

 Score = 91.3 bits (225), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 76/126 (60%), Gaps = 1/126 (0%)

Query: 37  FYEFFTLTGIRVDRVQPGFITCSFKVPPRLADRNGKLASGTIATLVDVVGGAVIHEEGLP 96
           F E F   G++VD ++PG I CS K+PP L +    L  G  ATLVD++G AVI+  G  
Sbjct: 30  FLERFVTNGLKVDLIEPGRIVCSMKIPPHLLNAGKFLHGGATATLVDLIGSAVIYTAGAS 89

Query: 97  MH-VSVDMSISFLSTANVGDELEITSRLLGRKGGYSGTIVVLKNKATGELIAEGRHSLFG 155
              VSV++++S+L  A + +E+EI S+ L      +   V L+ K TG++IA+GRH+ + 
Sbjct: 90  HSGVSVEINVSYLDAAFLDEEIEIESKALRVGKAVAVVSVELRKKTTGKIIAQGRHTKYF 149

Query: 156 RHKSKM 161
             +S +
Sbjct: 150 APRSNL 155


>AT3G16175.1 | Symbols:  | Thioesterase superfamily protein |
           chr3:5480497-5481208 FORWARD LENGTH=157
          Length = 157

 Score = 76.6 bits (187), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 66/122 (54%)

Query: 29  IRTGDNACFYEFFTLTGIRVDRVQPGFITCSFKVPPRLADRNGKLASGTIATLVDVVGGA 88
           I  G+    +E   L G+ +  V  G + C   V   +   +G   +G I  ++D +G +
Sbjct: 16  IAKGNGQTEFEILILKGLELIHVGKGILRCKLLVTDHVVGEDGSWNAGVITAVMDSIGAS 75

Query: 89  VIHEEGLPMHVSVDMSISFLSTANVGDELEITSRLLGRKGGYSGTIVVLKNKATGELIAE 148
            ++  G  +H+SVD++ SF STA + + +EI +R+ G  GG    ++ ++ + +GE+IA 
Sbjct: 76  AVYSSGGGLHISVDLNSSFYSTAKIHETVEIEARVNGSNGGLKSAVIEIRRETSGEIIAT 135

Query: 149 GR 150
           GR
Sbjct: 136 GR 137


>AT1G52191.1 | Symbols:  | Thioesterase superfamily protein |
           chr1:19439367-19441400 REVERSE LENGTH=138
          Length = 138

 Score = 56.2 bits (134), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 1/88 (1%)

Query: 40  FFTLTGIRVDRVQPGFITCSFKVPPRLADRNGKLASGTIATLVDVVGGAVIHEEGLPMHV 99
            F L G++V  V  G + C   V   + + +G L +  I  L++++G   I+  G   H 
Sbjct: 3   LFILEGLQVIHVGRGIVRCKLTVTHHVLNEDGTLHTAAIGVLMELMGAIAIYSAG-GSHT 61

Query: 100 SVDMSISFLSTANVGDELEITSRLLGRK 127
           SVD++ S  STA + +E++I +R++G++
Sbjct: 62  SVDLNYSLYSTAKIQEEIKIEARVVGKR 89