Miyakogusa Predicted Gene
- Lj0g3v0245039.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0245039.2 Non Chatacterized Hit- tr|I1LDY0|I1LDY0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.10015 PE,69.7,0,no
description,NULL; P-loop containing nucleoside triphosphate
hydrolases,NULL; DEAD_ATP_HELICASE,RN,CUFF.16049.2
(367 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 411 e-115
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 196 2e-50
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 196 2e-50
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 194 9e-50
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 194 9e-50
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 175 5e-44
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 155 4e-38
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 152 4e-37
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 152 5e-37
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 151 9e-37
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 138 5e-33
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 138 5e-33
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 138 5e-33
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 138 6e-33
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 138 6e-33
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 137 2e-32
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 136 2e-32
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 131 9e-31
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 129 3e-30
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 127 9e-30
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 125 3e-29
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 125 3e-29
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 125 3e-29
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 125 4e-29
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 124 9e-29
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 123 2e-28
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 122 3e-28
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 119 3e-27
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 118 6e-27
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 113 2e-25
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 112 3e-25
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 112 3e-25
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 112 4e-25
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 112 4e-25
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 107 2e-23
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 106 3e-23
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 105 5e-23
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 105 5e-23
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 105 5e-23
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 104 1e-22
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 103 2e-22
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 102 3e-22
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 101 7e-22
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 100 2e-21
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 99 4e-21
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 98 8e-21
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 97 2e-20
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 97 3e-20
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 96 4e-20
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 96 4e-20
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 96 5e-20
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 95 9e-20
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 94 2e-19
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 94 2e-19
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 94 2e-19
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 93 2e-19
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 93 3e-19
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 93 3e-19
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 93 3e-19
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 91 1e-18
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 91 1e-18
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 90 2e-18
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 90 2e-18
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 89 3e-18
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 89 3e-18
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 89 6e-18
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 88 7e-18
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 87 1e-17
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 87 2e-17
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 87 2e-17
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 87 3e-17
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 86 3e-17
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 82 9e-16
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 80 3e-15
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 77 1e-14
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 71 1e-12
AT5G08110.1 | Symbols: | nucleic acid binding;ATP-dependent hel... 53 3e-07
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 52 5e-07
AT2G28600.1 | Symbols: | P-loop containing nucleoside triphosph... 49 5e-06
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 411 bits (1056), Expect = e-115, Method: Compositional matrix adjust.
Identities = 195/254 (76%), Positives = 217/254 (85%)
Query: 113 PNAVSRFRISEPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPI 172
PNAVS+FRIS PLR LK GIE+LFPIQA TFD +LDGAD+VGRARTGQGKTLAFVLPI
Sbjct: 95 PNAVSKFRISAPLREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPI 154
Query: 173 LESLTNGPGKVARKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPY 232
LESL NGP K RK GYGRSPSVLVLLPTRELA QV ADF+ YG ++GL++CCLYGG Y
Sbjct: 155 LESLVNGPAKSKRKMGYGRSPSVLVLLPTRELAKQVAADFDAYGGSLGLSSCCLYGGDSY 214
Query: 233 HSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILG 292
QE LKRGVDIV+GTPGRIKDHIERQNLD S L+FRVLDEADEMLRMGFVEDVE ILG
Sbjct: 215 PVQEGKLKRGVDIVVGTPGRIKDHIERQNLDFSYLQFRVLDEADEMLRMGFVEDVELILG 274
Query: 293 EVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVRHIVLPCSSS 352
+V+D +VQTLLFSATLP WVK IS +FLK D+KT DLVGN+KMKAS +VRHI +PC+ +
Sbjct: 275 KVEDSTKVQTLLFSATLPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSVRHIAIPCNKA 334
Query: 353 ARAQLIPDIIRCYS 366
A A+LIPDII CYS
Sbjct: 335 AMARLIPDIISCYS 348
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/253 (43%), Positives = 158/253 (62%), Gaps = 9/253 (3%)
Query: 115 AVSRFRISEPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILE 174
A+S IS + L KGIE LFPIQ + ++G DM+GRARTG GKTLAF +PI++
Sbjct: 105 AISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIID 164
Query: 175 SLTNGPGKVARKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHS 234
+ K K G GR+P LVL PTRELA QV +F SA L+ CLYGG P
Sbjct: 165 KII----KYNAKHGRGRNPLCLVLAPTRELARQVEKEFRE--SAPSLDTICLYGGTPIGQ 218
Query: 235 QESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEV 294
Q L GVD+ +GTPGR+ D ++R L+LS+++F VLDEAD+ML++GF EDVE IL ++
Sbjct: 219 QMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKL 278
Query: 295 DDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVRHIVLPCSSSAR 354
+ + Q+++FSAT+P W++ ++ K+L + T DLVG+ K + + + S R
Sbjct: 279 PE--KRQSMMFSATMPSWIRSLTKKYLN-NPLTVDLVGDSDQKLADGITTYSIIADSYGR 335
Query: 355 AQLIPDIIRCYSR 367
A +I ++ +++
Sbjct: 336 ASIIGPLVTEHAK 348
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/253 (42%), Positives = 158/253 (62%), Gaps = 9/253 (3%)
Query: 115 AVSRFRISEPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILE 174
A++ IS + LK +GIE LFPIQ + ++G DM+GRARTG GKTLAF +PI++
Sbjct: 117 AIADLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIID 176
Query: 175 SLTNGPGKVARKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHS 234
+ K K G G++P LVL PTRELA QV +F SA L+ CLYGG P
Sbjct: 177 KII----KFNAKHGRGKNPQCLVLAPTRELARQVEKEFRE--SAPSLDTICLYGGTPIGQ 230
Query: 235 QESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEV 294
Q L G+D+ +GTPGRI D ++R L+LS+++F VLDEAD+ML++GF EDVE IL ++
Sbjct: 231 QMRELNYGIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKL 290
Query: 295 DDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVRHIVLPCSSSAR 354
+ Q+++FSAT+P W++ ++ K+L + T DLVG+ K + + + S R
Sbjct: 291 P--AKRQSMMFSATMPSWIRSLTKKYLN-NPLTIDLVGDSDQKLADGITMYSIAADSYGR 347
Query: 355 AQLIPDIIRCYSR 367
A +I +++ + +
Sbjct: 348 ASIIGPLVKEHGK 360
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 194 bits (492), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 107/253 (42%), Positives = 159/253 (62%), Gaps = 5/253 (1%)
Query: 115 AVSRFRISEPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILE 174
A+S+ + + L L+++GI LFPIQ L G D++ RA+TG GKTLAF +PI++
Sbjct: 103 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 162
Query: 175 SLTNGPGKVARKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHS 234
LT G GR P LVL PTRELA QV + E+ SA L+ C+YGG Y
Sbjct: 163 RLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQV--EKEIKESAPYLSTVCVYGGVSYTI 220
Query: 235 QESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEV 294
Q+S L RGVD+V+GTPGRI D IE ++L L ++ + VLDEAD+ML +GF E VE IL +
Sbjct: 221 QQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENL 280
Query: 295 DDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVRHIVLPCSSSAR 354
+ Q++LFSAT+P WVK+++ K+L + DLVG++ K + ++ + +S+++
Sbjct: 281 P--TKRQSMLFSATMPTWVKKLARKYLD-NPLNIDLVGDQDEKLAEGIKLYAIATTSTSK 337
Query: 355 AQLIPDIIRCYSR 367
++ D+I Y++
Sbjct: 338 RTILSDLITVYAK 350
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 194 bits (492), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 107/253 (42%), Positives = 159/253 (62%), Gaps = 5/253 (1%)
Query: 115 AVSRFRISEPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILE 174
A+S+ + + L L+++GI LFPIQ L G D++ RA+TG GKTLAF +PI++
Sbjct: 103 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 162
Query: 175 SLTNGPGKVARKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHS 234
LT G GR P LVL PTRELA QV + E+ SA L+ C+YGG Y
Sbjct: 163 RLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQV--EKEIKESAPYLSTVCVYGGVSYTI 220
Query: 235 QESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEV 294
Q+S L RGVD+V+GTPGRI D IE ++L L ++ + VLDEAD+ML +GF E VE IL +
Sbjct: 221 QQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENL 280
Query: 295 DDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVRHIVLPCSSSAR 354
+ Q++LFSAT+P WVK+++ K+L + DLVG++ K + ++ + +S+++
Sbjct: 281 P--TKRQSMLFSATMPTWVKKLARKYLD-NPLNIDLVGDQDEKLAEGIKLYAIATTSTSK 337
Query: 355 AQLIPDIIRCYSR 367
++ D+I Y++
Sbjct: 338 RTILSDLITVYAK 350
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/219 (43%), Positives = 141/219 (64%), Gaps = 5/219 (2%)
Query: 149 LDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTGYGRSPSVLVLLPTRELATQV 208
L G D++ RA+TG GKTLAF +PI++ LT G GR P LVL PTRELA QV
Sbjct: 44 LQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQV 103
Query: 209 FADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLR 268
+ E+ SA L+ C+YGG Y Q+S L RGVD+V+GTPGRI D IE ++L L ++
Sbjct: 104 --EKEIKESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVE 161
Query: 269 FRVLDEADEMLRMGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTA 328
+ VLDEAD+ML +GF E VE IL + + Q++LFSAT+P WVK+++ K+L +
Sbjct: 162 YLVLDEADQMLAVGFEEAVESILENLP--TKRQSMLFSATMPTWVKKLARKYLD-NPLNI 218
Query: 329 DLVGNEKMKASTNVRHIVLPCSSSARAQLIPDIIRCYSR 367
DLVG++ K + ++ + +S+++ ++ D+I Y++
Sbjct: 219 DLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAK 257
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/239 (40%), Positives = 138/239 (57%), Gaps = 10/239 (4%)
Query: 132 KGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTGYGR 191
K E PIQ+ T+ +LDG D++G A+TG GKTLAF +P + + K +K G G
Sbjct: 132 KTFEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVL----KKNKKIGGGS 187
Query: 192 ---SPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVIG 248
+P+ LVL PTRELA Q+ G GL + C+YGG+ Q S ++ GVDIVIG
Sbjct: 188 KKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIG 247
Query: 249 TPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQTLLFSAT 308
TPGR++D IE L LS + F VLDEAD ML MGF E V IL + V Q ++FSAT
Sbjct: 248 TPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTNKVR--QMVMFSAT 305
Query: 309 LPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVRHIVLPCSSSARAQLIPDIIRCYSR 367
P+ V +++ +F+ P+ ++G+ + A+ +V I+ AR Q + ++ Y +
Sbjct: 306 WPLDVHKLAQEFMDPNPIKV-IIGSVDLAANHDVMQIIEVLDERARDQRLIALLEKYHK 363
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 136/238 (57%), Gaps = 13/238 (5%)
Query: 129 LKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTG 188
+K+ G PIQ+ + + G D++G A TG GKTL+++LP + + P
Sbjct: 114 VKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQP-----MLA 168
Query: 189 YGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVIG 248
+G P VLVL PTRELA Q+ + +GS+ + C+YGG P Q +L++GV+IVI
Sbjct: 169 HGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIA 228
Query: 249 TPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQTLLFSAT 308
TPGR+ D +E N +L ++ + VLDEAD ML MGF + +I+ + QTL +SAT
Sbjct: 229 TPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDR--QTLYWSAT 286
Query: 309 LPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVRHIVLPCSSSAR----AQLIPDII 362
P V+Q+S KFL K ++G+ +KA+ +R IV S S + +L+ DI+
Sbjct: 287 WPKEVEQLSKKFLYNPYKV--IIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIM 342
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/222 (39%), Positives = 133/222 (59%), Gaps = 10/222 (4%)
Query: 125 LRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVA 184
L AI K G PIQA + L G D++G A TG GKTLA++LP L ++ P
Sbjct: 177 LEAIAKL-GFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQP---- 231
Query: 185 RKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVD 244
+ G P VL+L PTRELA Q+ + +G G+ + C+YGGAP Q +L+RGV+
Sbjct: 232 -RLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVE 290
Query: 245 IVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQTLL 304
IVI TPGR+ D +E Q+ +L ++ + VLDEAD ML MGF + +I+ ++ QTLL
Sbjct: 291 IVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDR--QTLL 348
Query: 305 FSATLPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVRHIV 346
+SAT P V+ ++ +FL+ K ++G+ +KA+ ++ ++
Sbjct: 349 WSATWPREVETLARQFLRDPYKA--IIGSTDLKANQSINQVI 388
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 88/222 (39%), Positives = 133/222 (59%), Gaps = 10/222 (4%)
Query: 125 LRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVA 184
L AI K G PIQA + L G D++G A TG GKTLA++LP L ++ P
Sbjct: 177 LEAIAKL-GFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQP---- 231
Query: 185 RKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVD 244
+ G P VL+L PTRELA Q+ + +G G+ + C+YGGAP Q +L+RGV+
Sbjct: 232 -RLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVE 290
Query: 245 IVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQTLL 304
IVI TPGR+ D +E Q+ +L ++ + VLDEAD ML MGF + +I+ ++ QTLL
Sbjct: 291 IVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDR--QTLL 348
Query: 305 FSATLPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVRHIV 346
+SAT P V+ ++ +FL+ K ++G+ +KA+ ++ ++
Sbjct: 349 WSATWPREVETLARQFLRDPYKA--IIGSTDLKANQSINQVI 388
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 120/199 (60%), Gaps = 9/199 (4%)
Query: 123 EPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGK 182
E LR +L G + PIQA ++ + G D+V A+TG GKTL +++P L +
Sbjct: 168 ELLREVLS-AGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQ----R 222
Query: 183 VARKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRG 242
+ + G P++LVL PTRELATQ+ + +G + ++ CLYGGAP Q +L+RG
Sbjct: 223 IRNDSRMG--PTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERG 280
Query: 243 VDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQT 302
DIV+ TPGR+ D +E + + L ++ + VLDEAD ML MGF + +I+ E+ + QT
Sbjct: 281 ADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIP--TKRQT 338
Query: 303 LLFSATLPVWVKQISTKFL 321
L+++AT P V++I+ L
Sbjct: 339 LMYTATWPKGVRKIAADLL 357
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 120/199 (60%), Gaps = 9/199 (4%)
Query: 123 EPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGK 182
E LR +L G + PIQA ++ + G D+V A+TG GKTL +++P L +
Sbjct: 168 ELLREVLS-AGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQ----R 222
Query: 183 VARKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRG 242
+ + G P++LVL PTRELATQ+ + +G + ++ CLYGGAP Q +L+RG
Sbjct: 223 IRNDSRMG--PTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERG 280
Query: 243 VDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQT 302
DIV+ TPGR+ D +E + + L ++ + VLDEAD ML MGF + +I+ E+ + QT
Sbjct: 281 ADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIP--TKRQT 338
Query: 303 LLFSATLPVWVKQISTKFL 321
L+++AT P V++I+ L
Sbjct: 339 LMYTATWPKGVRKIAADLL 357
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 120/199 (60%), Gaps = 9/199 (4%)
Query: 123 EPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGK 182
E LR +L G + PIQA ++ + G D+V A+TG GKTL +++P L +
Sbjct: 168 ELLREVLS-AGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQ----R 222
Query: 183 VARKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRG 242
+ + G P++LVL PTRELATQ+ + +G + ++ CLYGGAP Q +L+RG
Sbjct: 223 IRNDSRMG--PTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERG 280
Query: 243 VDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQT 302
DIV+ TPGR+ D +E + + L ++ + VLDEAD ML MGF + +I+ E+ + QT
Sbjct: 281 ADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIP--TKRQT 338
Query: 303 LLFSATLPVWVKQISTKFL 321
L+++AT P V++I+ L
Sbjct: 339 LMYTATWPKGVRKIAADLL 357
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 116/199 (58%), Gaps = 9/199 (4%)
Query: 123 EPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGK 182
E LR +L G S PIQA T+ L D+V A+TG GKTL +++P L +
Sbjct: 445 EILRELLS-AGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFILLRHC--- 500
Query: 183 VARKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRG 242
+ P+VL+L PTRELATQ+ + +G + ++ CLYGGAP Q L+RG
Sbjct: 501 ---RNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERG 557
Query: 243 VDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQT 302
DIV+ TPGR+ D +E + +D ++ VLDEAD ML MGF + +I+ E+ R QT
Sbjct: 558 ADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPP--RRQT 615
Query: 303 LLFSATLPVWVKQISTKFL 321
L+++AT P V++I++ L
Sbjct: 616 LMYTATWPKEVRKIASDLL 634
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 120/199 (60%), Gaps = 9/199 (4%)
Query: 123 EPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGK 182
E LR +L G + PIQA ++ + G D+V A+TG GKTL +++P L +
Sbjct: 168 ELLREVLS-AGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQ----R 222
Query: 183 VARKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRG 242
+ + G P++LVL PTRELATQ+ + +G + ++ CLYGGAP Q +L+RG
Sbjct: 223 IRNDSRMG--PTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERG 280
Query: 243 VDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQT 302
DIV+ TPGR+ D +E + + L ++ + VLDEAD ML MGF + +I+ E+ + QT
Sbjct: 281 ADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIP--TKRQT 338
Query: 303 LLFSATLPVWVKQISTKFL 321
L+++AT P V++I+ L
Sbjct: 339 LMYTATWPKGVRKIAADLL 357
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 114/189 (60%), Gaps = 8/189 (4%)
Query: 133 GIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTGYGRS 192
G + PIQA ++ + D+V A+TG GKTL +++P L ++ + G
Sbjct: 180 GFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQ----RIHNDSRMG-- 233
Query: 193 PSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVIGTPGR 252
P++LVL PTRELATQ+ + +G + ++ CLYGGAP Q ++RGVDIV+ TPGR
Sbjct: 234 PTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGR 293
Query: 253 IKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQTLLFSATLPVW 312
+ D +E + + L ++ + VLDEAD ML MGF + +I+ EV + QTL+++AT P
Sbjct: 294 LNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVP--TKRQTLMYTATWPKE 351
Query: 313 VKQISTKFL 321
V++I+ L
Sbjct: 352 VRKIAADLL 360
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 116/194 (59%), Gaps = 8/194 (4%)
Query: 128 ILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKT 187
++ G + PIQA ++ + D+V A+TG GKTL +++P L ++ +
Sbjct: 243 MVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQ----RIHNDS 298
Query: 188 GYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVI 247
G P++LVL PTRELATQ+ + +G + ++ CLYGGAP Q ++RGVDIV+
Sbjct: 299 RMG--PTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVV 356
Query: 248 GTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQTLLFSA 307
TPGR+ D +E + + L ++ + VLDEAD ML MGF + +I+ EV + QTL+++A
Sbjct: 357 ATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVP--TKRQTLMYTA 414
Query: 308 TLPVWVKQISTKFL 321
T P V++I+ L
Sbjct: 415 TWPKEVRKIAADLL 428
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 125/225 (55%), Gaps = 10/225 (4%)
Query: 121 ISEPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGP 180
S + + +K++ E IQ +L G D++G A+TG GKT AFVLP++ + + P
Sbjct: 235 FSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQP 294
Query: 181 GKVARKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLK 240
++ R G P ++ PTRELA Q+F + + + A GL +YGG H Q LK
Sbjct: 295 -ELQRDEG----PIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELK 349
Query: 241 RGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRV 300
G +IV+ TPGR+ D ++ + L + + + VLDEAD M +GF V I+G++
Sbjct: 350 AGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDR-- 407
Query: 301 QTLLFSATLPVWVKQISTKFLK-PDKKTADLVG--NEKMKASTNV 342
QTLLFSAT+P V++++ + L P + T VG NE + NV
Sbjct: 408 QTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQVVNV 452
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 109/187 (58%), Gaps = 6/187 (3%)
Query: 139 PIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTGYGRS--PSVL 196
P+Q +L+G D++ A+TG GKT AF PI+ + V R G R+ P +
Sbjct: 184 PVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKD-QHVQRPRG-SRTVYPLAV 241
Query: 197 VLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDH 256
+L PTRELA+Q+ + + + G+ YGG P + Q L+RGVDI++ TPGR+ D
Sbjct: 242 ILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQQLRELERGVDILVATPGRLNDL 301
Query: 257 IERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNR--VQTLLFSATLPVWVK 314
+ER + + +RF LDEAD ML MGF + +I+ ++D R QTLLFSAT P ++
Sbjct: 302 LERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQ 361
Query: 315 QISTKFL 321
+++ FL
Sbjct: 362 RLAADFL 368
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 110/196 (56%), Gaps = 10/196 (5%)
Query: 129 LKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTG 188
LK+ E PIQA I+ G D +G A+TG GKTL FVLP+L + + P A
Sbjct: 411 LKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEA---- 466
Query: 189 YGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVIG 248
G P LV+ PTREL Q+++D + A+G+ +YGG+ Q S LKRG +IV+
Sbjct: 467 -GDGPIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKRGTEIVVC 525
Query: 249 TPGRIKDHIERQNLDLSKLR---FRVLDEADEMLRMGFVEDVERILGEVDDVNRVQTLLF 305
TPGR+ D + + ++ LR + V+DEAD M MGF + RI+ + QT+LF
Sbjct: 526 TPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDR--QTVLF 583
Query: 306 SATLPVWVKQISTKFL 321
SAT P V+ ++ K L
Sbjct: 584 SATFPRQVETLARKVL 599
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 101/185 (54%), Gaps = 2/185 (1%)
Query: 139 PIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTGYGRSPSVLVL 198
P+Q +L D++ A+TG GKT AF PI+ + + P ++L
Sbjct: 176 PVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVIL 235
Query: 199 LPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIE 258
PTRELA Q+ + + + G+ YGG P H Q L+RG DI++ TPGR+ D +E
Sbjct: 236 SPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLE 295
Query: 259 RQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNR--VQTLLFSATLPVWVKQI 316
R + + +RF LDEAD ML MGF + +I+ ++D R QT+LFSAT P ++++
Sbjct: 296 RARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRL 355
Query: 317 STKFL 321
+ F+
Sbjct: 356 AADFM 360
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 101/185 (54%), Gaps = 2/185 (1%)
Query: 139 PIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTGYGRSPSVLVL 198
P+Q +L D++ A+TG GKT AF PI+ + + P ++L
Sbjct: 176 PVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVIL 235
Query: 199 LPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIE 258
PTRELA Q+ + + + G+ YGG P H Q L+RG DI++ TPGR+ D +E
Sbjct: 236 SPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLE 295
Query: 259 RQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNR--VQTLLFSATLPVWVKQI 316
R + + +RF LDEAD ML MGF + +I+ ++D R QT+LFSAT P ++++
Sbjct: 296 RARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRL 355
Query: 317 STKFL 321
+ F+
Sbjct: 356 AADFM 360
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 101/185 (54%), Gaps = 2/185 (1%)
Query: 139 PIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTGYGRSPSVLVL 198
P+Q +L D++ A+TG GKT AF PI+ + + P ++L
Sbjct: 176 PVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVIL 235
Query: 199 LPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIE 258
PTRELA Q+ + + + G+ YGG P H Q L+RG DI++ TPGR+ D +E
Sbjct: 236 SPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLE 295
Query: 259 RQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNR--VQTLLFSATLPVWVKQI 316
R + + +RF LDEAD ML MGF + +I+ ++D R QT+LFSAT P ++++
Sbjct: 296 RARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRL 355
Query: 317 STKFL 321
+ F+
Sbjct: 356 AADFM 360
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 107/196 (54%), Gaps = 10/196 (5%)
Query: 129 LKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTG 188
+K+ E PIQ I+ G D +G A+TG GKTL FVLP+L + + P A
Sbjct: 206 MKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEA---- 261
Query: 189 YGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVIG 248
G P LV+ PTREL Q+ +D + +G+ +YGG+ Q S LKRG +IV+
Sbjct: 262 -GDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVC 320
Query: 249 TPGRIKDHIERQNLDLSKLR---FRVLDEADEMLRMGFVEDVERILGEVDDVNRVQTLLF 305
TPGR+ D + + ++ LR F V+DEAD M MGF + RI+ + QT+LF
Sbjct: 321 TPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRP--ERQTVLF 378
Query: 306 SATLPVWVKQISTKFL 321
SAT P V+ ++ K L
Sbjct: 379 SATFPRQVETLARKVL 394
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 107/196 (54%), Gaps = 10/196 (5%)
Query: 129 LKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTG 188
+K+ E PIQ I+ G D +G A+TG GKTL FVLP+L + + P A
Sbjct: 544 MKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEA---- 599
Query: 189 YGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVIG 248
G P LV+ PTREL Q+ +D + +G+ +YGG+ Q S LKRG +IV+
Sbjct: 600 -GDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVC 658
Query: 249 TPGRIKDHIERQNLDLSKLR---FRVLDEADEMLRMGFVEDVERILGEVDDVNRVQTLLF 305
TPGR+ D + + ++ LR F V+DEAD M MGF + RI+ + QT+LF
Sbjct: 659 TPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNI--RPERQTVLF 716
Query: 306 SATLPVWVKQISTKFL 321
SAT P V+ ++ K L
Sbjct: 717 SATFPRQVETLARKVL 732
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 104/186 (55%), Gaps = 4/186 (2%)
Query: 139 PIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTGY-GRSPSVLV 197
P+Q + G D++ A+TG GKT AF PI+ + + R G G P ++
Sbjct: 171 PVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQ-HIERPRGVRGVYPLAVI 229
Query: 198 LLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHI 257
L PTRELA Q+ + + G+ YGG P + Q L+RGVDI++ TPGR+ D +
Sbjct: 230 LSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLL 289
Query: 258 ERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVD--DVNRVQTLLFSATLPVWVKQ 315
ER + L +RF LDEAD ML MGF + +I+ ++D QT+LFSAT P +++
Sbjct: 290 ERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQR 349
Query: 316 ISTKFL 321
+++ FL
Sbjct: 350 LASDFL 355
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 112/210 (53%), Gaps = 12/210 (5%)
Query: 119 FRISEPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLP-ILESLT 177
+ PL +LK KGI PIQ +L G DM+G A TG GKTL FVLP I+ +L
Sbjct: 102 MKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQ 161
Query: 178 NGPGKVARKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAM------GLNACCLYGGAP 231
++ G P LV+ P+RELA Q + E + +++ L + GG
Sbjct: 162 E---EIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVD 218
Query: 232 YHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERIL 291
SQ +K+GV IV+ TPGR+KD + ++ + L R LDEAD ++ +GF +D+ +
Sbjct: 219 MRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHVF 278
Query: 292 GEVDDVNRVQTLLFSATLPVWVKQISTKFL 321
++ QTLLFSAT+P ++ +T L
Sbjct: 279 DHFK--SQRQTLLFSATMPAKIQIFATSAL 306
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 108/202 (53%), Gaps = 10/202 (4%)
Query: 119 FRISEPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTN 178
+ P+ LK+KGI PIQ IL G DM+G A TG GKTL FVLP++ +
Sbjct: 151 MKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMI--MIA 208
Query: 179 GPGKVARKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAM------GLNACCLYGGAPY 232
++ G P L++ P+RELA Q + E + + + L + GG
Sbjct: 209 LQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIGGIDM 268
Query: 233 HSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILG 292
SQ +KRGV IV+ TPGR+KD + ++ + L R+ LDEAD ++ +GF +D+ +
Sbjct: 269 RSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDLGFEDDIREVFD 328
Query: 293 EVDDVNRVQTLLFSATLPVWVK 314
++ QTLLFSAT+P ++
Sbjct: 329 HFK--SQRQTLLFSATMPTKIQ 348
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 126/216 (58%), Gaps = 18/216 (8%)
Query: 125 LRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVA 184
L+AI K G E++ +Q T IL G D++ +A+TG GKT+AF+LP +E++ P +
Sbjct: 394 LKAI-KDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSP-PAS 451
Query: 185 RKTGYGRSPSVLVLL--PTRELATQVFADFEV---YGSAMGLNACCLYGGAPYHSQESNL 239
R + R P ++VL+ PTRELA+Q A+ Y ++G+ + GG +++ +
Sbjct: 452 RDS---RQPPIIVLVVCPTRELASQAAAEANTLLKYHPSIGVQ--VVIGGTKLPTEQRRM 506
Query: 240 KRG-VDIVIGTPGRIKDHIERQNLDLSKL---RFRVLDEADEMLRMGFVEDVERILGEVD 295
+ I++ TPGR+KDHIE + ++L + VLDEAD +L MGF D+ERI+ V
Sbjct: 507 QTNPCQILVATPGRLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVP 566
Query: 296 DVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLV 331
+ QT LFSAT+P V+QI LK D + + V
Sbjct: 567 --KQRQTFLFSATVPEEVRQICHVALKRDHEFINCV 600
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 135/247 (54%), Gaps = 22/247 (8%)
Query: 129 LKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLP----ILESLTNGPG--K 182
L GI + +Q T LDG D + +A+TG GK++AF+LP +L+++ +G G K
Sbjct: 390 LSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIETVLKAMNSGKGVHK 449
Query: 183 VARKTGYGRSPSVLVLLPTRELATQVFADFE-VYGSAMGLNACCLYGGAPYHSQESNLKR 241
VA VL+L PTRELA+Q+ A+ + + + G+ L GG + + L+
Sbjct: 450 VA-------PIFVLILCPTRELASQIAAEGKALLKNHDGIGVQTLIGGTRFRLDQQRLES 502
Query: 242 G-VDIVIGTPGRIKDHIERQNLDLSK---LRFRVLDEADEMLRMGFVEDVERILGEVDDV 297
I+I TPGR+ DHIE ++ S+ L+ ++DEAD +L +GF DVE+I +D +
Sbjct: 503 EPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFKRDVEKI---IDCL 559
Query: 298 NRV-QTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVRHIVLPCSSSARAQ 356
R Q+LLFSAT+P V+++S LK D D +G ++ V+ + +
Sbjct: 560 PRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVKQSCIVAPHESHFH 619
Query: 357 LIPDIIR 363
L+P +++
Sbjct: 620 LVPHLLK 626
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 128/247 (51%), Gaps = 16/247 (6%)
Query: 125 LRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVA 184
L+AI K G E++ +Q T IL G D++ +A+TG GKT+AF+LP +E + P
Sbjct: 332 LKAI-KDAGYETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEVVVKSP---P 387
Query: 185 RKTGYGRSPSV-LVLLPTRELATQVFADFEV---YGSAMGLNACCLYGGAPYHSQESNLK 240
R P + LV+ PTRELA Q + Y ++G+ + GG ++ ++
Sbjct: 388 TSPDNKRPPILALVICPTRELANQAATEANTLLKYHPSIGVQ--VVIGGTRLGLEQKRMQ 445
Query: 241 RG-VDIVIGTPGRIKDHIERQ---NLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDD 296
I++ TPGR+KDHIE L ++ VLDEAD +L MGF +D+ERI+ V
Sbjct: 446 TNPCQILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHLLDMGFRKDIERIISAVP- 504
Query: 297 VNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVRHIVLPCSSSARAQ 356
QT LFSAT+P V+QI L+ D + + V ++ VR + + S
Sbjct: 505 -KERQTFLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQQVRQMHMIASLDRHFS 563
Query: 357 LIPDIIR 363
L+ ++R
Sbjct: 564 LLYTLLR 570
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 100/185 (54%), Gaps = 15/185 (8%)
Query: 129 LKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNG-PGKVARKT 187
+K+KG + PIQ T IL G D+V ARTG GKT AF++P+LE L P R
Sbjct: 43 IKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEKLKQHVPQGGVR-- 100
Query: 188 GYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVI 247
L+L PTR+LA Q + G L L GG Q L +G D++I
Sbjct: 101 -------ALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGPDVII 153
Query: 248 GTPGRIKDHI--ERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQTLLF 305
TPGR+ H+ E ++ L + + V DEAD + MGF E + +IL ++ + NR QTLLF
Sbjct: 154 ATPGRLM-HLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSE-NR-QTLLF 210
Query: 306 SATLP 310
SATLP
Sbjct: 211 SATLP 215
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 132/249 (53%), Gaps = 26/249 (10%)
Query: 129 LKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTG 188
L GI + +Q T LDG D + +A+TG GK++AF+LP +E++ A +G
Sbjct: 343 LSASGILKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIETVLK-----AMNSG 397
Query: 189 YGRSPS----VLVLLPTRELATQVFADFEVYGSAM-----GLNACCLYGGAPYHSQESNL 239
G + L+L PTRELA+Q+ A+ G A+ G+ L GG + + L
Sbjct: 398 KGVNKVAPIFALILCPTRELASQIAAE----GKALLKFHDGIGVQTLIGGTRFKLDQQRL 453
Query: 240 KRG-VDIVIGTPGRIKDHIERQNLDLSK---LRFRVLDEADEMLRMGFVEDVERILGEVD 295
+ I+I TPGR+ DHIE ++ S+ L+ ++DEAD +L +GF DVE+I +D
Sbjct: 454 ESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFRRDVEKI---ID 510
Query: 296 DVNRV-QTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVRHIVLPCSSSAR 354
+ R Q+LLFSAT+P V+++S LK D D +G ++ VR + +
Sbjct: 511 CLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVRQSCIVAPHESH 570
Query: 355 AQLIPDIIR 363
L+P +++
Sbjct: 571 FHLVPHLLK 579
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 120/208 (57%), Gaps = 17/208 (8%)
Query: 133 GIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTGYGRS 192
G +++ +Q T IL G D++ +A+TG GKT+AF+LP +E++ P +R R
Sbjct: 99 GFKTMTVVQEATLPLILQGKDILAKAKTGTGKTVAFLLPSIEAVIKAP-PASRDN---RH 154
Query: 193 PSVLVLL--PTRELATQVFADFEV---YGSAMGLNACCLYGGAPYHSQESNLKRG-VDIV 246
P ++VL+ PTRELA Q A+ + Y ++G+ + GG +++ L++ I+
Sbjct: 155 PPIIVLVVCPTRELACQAAAEANILLKYHPSIGVQ--VVIGGTKLPTEQRRLQKSPCQIL 212
Query: 247 IGTPGRIKDHIERQNLDLSKL---RFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQTL 303
+ TPGR+KDHI+ + ++L + VLDEAD +L MGF ++ERI+ V + QT
Sbjct: 213 VATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLDMGFRREIERIIAAVP--KQRQTF 270
Query: 304 LFSATLPVWVKQISTKFLKPDKKTADLV 331
LFSAT+ V+QI LK D + + V
Sbjct: 271 LFSATVSDEVRQICHVALKRDHEFVNCV 298
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 121/242 (50%), Gaps = 22/242 (9%)
Query: 121 ISEPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGP 180
+SE + L++ IE IQ + +++ +V + TG GKTLA++LPI++ +
Sbjct: 119 LSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIVQLMREDE 178
Query: 181 GKVARKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLK 240
+ +KT R P +VL PTREL+ QV+ + + + GG+ QE +L
Sbjct: 179 ANLGKKT-KPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRSILVSGGSRIRPQEDSLN 237
Query: 241 RGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVD----- 295
+D+V+GTPGRI HIE N+ + + VLDEAD M GF ++ + L ++
Sbjct: 238 NAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFLAPLNQRALK 297
Query: 296 -DVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKAST------NVRHIVLP 348
+ QT+L +AT+ + V+++ + + G E ++ ST N RH +
Sbjct: 298 TNDQGFQTVLVTATMTMAVQKLVDE---------EFQGIEHLRTSTLHKKIANARHDFIK 348
Query: 349 CS 350
S
Sbjct: 349 LS 350
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 122 SEPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPG 181
SE L+A+ ++ G + PIQ L D++G A TG GKT AFVLP+L ++ P
Sbjct: 322 SELLKAV-ERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPP 380
Query: 182 KVARKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKR 241
G P +V+ PTRELA Q+ + + +G + GG Q + +
Sbjct: 381 MSEENETEG--PYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQ 438
Query: 242 GVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVN--- 298
G +IVI TPGR+ D +ER+ L++ + VLDEAD M+ MGF V +L + N
Sbjct: 439 GCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNLKP 498
Query: 299 ------------RVQTLLFSATLPVWVKQISTKFLK 322
T +FSAT+P V++++ K+L+
Sbjct: 499 ENEEEELDEKKIYRTTYMFSATMPPGVERLARKYLR 534
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 100/197 (50%), Gaps = 10/197 (5%)
Query: 121 ISEPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGP 180
+S PL + G + PIQA L G D+ A TG GKT AF LP LE L P
Sbjct: 174 LSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLERLLFRP 233
Query: 181 GKVARKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLK 240
+V + VL+L PTRELA Q+ + + + + GG QE L+
Sbjct: 234 KRVF-------ATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLR 286
Query: 241 RGVDIVIGTPGRIKDHIERQ-NLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNR 299
DIV+ TPGR+ DH+ ++DL L +LDEAD +L+ GF ++ ++ R
Sbjct: 287 SMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLC--PKR 344
Query: 300 VQTLLFSATLPVWVKQI 316
QT+LFSAT+ VK++
Sbjct: 345 RQTMLFSATMTEEVKEL 361
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 118/235 (50%), Gaps = 8/235 (3%)
Query: 129 LKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTG 188
L+ G + PIQ L G ++ A TG GKT +F++PI+ T + +
Sbjct: 125 LETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSE--HPSD 182
Query: 189 YGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVIG 248
R+P +VL PTREL QV ++ G + + GG P Q +++GV+++IG
Sbjct: 183 QRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIG 242
Query: 249 TPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQTLLFSAT 308
TPGR+ D + + ++L + VLDE D ML+ GF + V +I +++ Q LLFSAT
Sbjct: 243 TPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIF---QALSQPQVLLFSAT 299
Query: 309 LPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVRHIVLPCSSSARAQLIPDIIR 363
+ V+++ K + +GN K + V + + + + Q + DI+R
Sbjct: 300 ISREVEKVGGSLAKEIILVS--IGNPN-KPNKAVNQLAIWVDAKQKKQKLFDILR 351
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 118/235 (50%), Gaps = 8/235 (3%)
Query: 129 LKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTG 188
L+ G + PIQ L G ++ A TG GKT +F++PI+ T + +
Sbjct: 125 LETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSE--HPSD 182
Query: 189 YGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVIG 248
R+P +VL PTREL QV ++ G + + GG P Q +++GV+++IG
Sbjct: 183 QRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIG 242
Query: 249 TPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQTLLFSAT 308
TPGR+ D + + ++L + VLDE D ML+ GF + V +I +++ Q LLFSAT
Sbjct: 243 TPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIF---QALSQPQVLLFSAT 299
Query: 309 LPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVRHIVLPCSSSARAQLIPDIIR 363
+ V+++ K + +GN K + V + + + + Q + DI+R
Sbjct: 300 ISREVEKVGGSLAKEIILVS--IGNPN-KPNKAVNQLAIWVDAKQKKQKLFDILR 351
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 109/205 (53%), Gaps = 5/205 (2%)
Query: 121 ISEPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGP 180
+ E L ++ G ++ IQA L+G D++G A+TG GKT AF +PIL++L
Sbjct: 16 VREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQALLEYV 75
Query: 181 GKVARKTGYGRSPSVL--VLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESN 238
K G P+ VL PTRELA Q+ FE G+ + L L GG Q
Sbjct: 76 YDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDRMQQTIA 135
Query: 239 LKRGVDIVIGTPGRIKDHI-ERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDV 297
L + +++ TPGR+ DH+ + + L L++ VLDEAD +L F + + +IL E+ +
Sbjct: 136 LGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILEEI-PL 194
Query: 298 NRVQTLLFSATLPVWVKQISTKFLK 322
R +T LFSAT+ V+++ L+
Sbjct: 195 ER-KTFLFSATMTKKVRKLQRACLR 218
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 97/184 (52%), Gaps = 17/184 (9%)
Query: 130 KQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTGY 189
K+ G+ P+Q IL G D++G A+TG GKT AF LPIL L P Y
Sbjct: 74 KELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHRLAEDP--------Y 125
Query: 190 GRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVIGT 249
G LV+ PTRELA Q+ F+ GS + L + GG +Q +L IVI T
Sbjct: 126 G--VFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHIVITT 183
Query: 250 PGRIKDHIERQNLD----LSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQTLLF 305
PGRIK +E N D S+ +F VLDEAD +L +GF +++ I + QTLLF
Sbjct: 184 PGRIKVLLE-NNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPKSR--QTLLF 240
Query: 306 SATL 309
SAT+
Sbjct: 241 SATM 244
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 102/190 (53%), Gaps = 9/190 (4%)
Query: 129 LKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTG 188
+K+ G + IQA ++ G D++G ARTG GKTLAF++P +E L K + G
Sbjct: 169 IKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVELLYR--VKFTPRNG 226
Query: 189 YGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVIG 248
G VLV+ PTRELA Q + + + GG ++ L +GV++++
Sbjct: 227 TG----VLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAEILAKGVNLLVA 282
Query: 249 TPGRIKDHIERQN-LDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQTLLFSA 307
TPGR+ DH+E N L+F V+DEAD +L F ED+++IL + QT LFSA
Sbjct: 283 TPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKTR--QTSLFSA 340
Query: 308 TLPVWVKQIS 317
T V+ ++
Sbjct: 341 TQSAKVEDLA 350
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 105/198 (53%), Gaps = 9/198 (4%)
Query: 121 ISEPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGP 180
+SE +K+ G + + IQA + +L+G D++G ARTG GKTLAF++P +E L
Sbjct: 96 LSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVELLFK-- 153
Query: 181 GKVARKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLK 240
+ + + G G V+V+ PTRELA Q E + GG S+ +
Sbjct: 154 ERFSPRNGTG----VIVICPTRELAIQTKNVAEELLKHHSQTVSMVIGGNNRRSEAQRIA 209
Query: 241 RGVDIVIGTPGRIKDHIERQNLDLSK-LRFRVLDEADEMLRMGFVEDVERILGEVDDVNR 299
G ++VI TPGR+ DH++ + K L+ V+DEAD +L F ED+ +IL +
Sbjct: 210 SGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKILPKTR- 268
Query: 300 VQTLLFSATLPVWVKQIS 317
QT LFSAT VK ++
Sbjct: 269 -QTALFSATQTSKVKDLA 285
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 149 LDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTGYGRSPSVLVLLPTRELATQV 208
L G ++ A TG GKT +F++PI+ T + + R+P +VL PTREL QV
Sbjct: 8 LTGKSLLASADTGSGKTASFLVPIISRCTTYHSE--HPSDQRRNPLAMVLAPTRELCVQV 65
Query: 209 FADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLR 268
++ G + + GG P Q +++GV+++IGTPGR+ D + + ++L +
Sbjct: 66 EDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIM 125
Query: 269 FRVLDEADEMLRMGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTA 328
VLDE D ML+ GF + V +I +++ Q LLFSAT+ V+++ K +
Sbjct: 126 TFVLDEVDCMLQRGFRDQVMQIF---QALSQPQVLLFSATISREVEKVGGSLAKEIILVS 182
Query: 329 DLVGNEKMKASTNVRHIVLPCSSSARAQLIPDIIRCYSR 367
+GN K + V + + + + Q + DI+R +
Sbjct: 183 --IGNPN-KPNKAVNQLAIWVDAKQKKQKLFDILRSQNH 218
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 99/189 (52%), Gaps = 17/189 (8%)
Query: 149 LDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTGYGRSPSVLVLLPTRELATQV 208
L+ D++G + TG GKT AFVLP+L ++ P R+ P LV++PTRELA Q+
Sbjct: 237 LEQRDVIGISATGSGKTAAFVLPMLAYISRLPP--MREENQTEGPYALVMVPTRELAHQI 294
Query: 209 FADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLR 268
+ + +G A + G Q L +G +IVI TPGR+ D +ER+ + L++
Sbjct: 295 EEETVKFSRYLGFKAVSITGWESIEKQALKLSQGCEIVIATPGRLLDCLERRYVVLNQCN 354
Query: 269 FRVLDEADEMLRMGFVEDVERILGEVDDVNRVQ---------------TLLFSATLPVWV 313
+ VLDEAD M+ M F V +L + N T +FSAT+ + V
Sbjct: 355 YLVLDEADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEELEEKKIYRTTYMFSATMLLSV 414
Query: 314 KQISTKFLK 322
++++ KFL+
Sbjct: 415 ERLARKFLR 423
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 103/206 (50%), Gaps = 25/206 (12%)
Query: 129 LKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTG 188
L+++G +Q+ I+ G D V ++ TG GKTLA++LPIL + G +A K+
Sbjct: 125 LEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPILSEI----GPLAEKSR 180
Query: 189 YGRSPS-------VLVLLPTRELATQVFADFE-VYGSAMGLNACCLYGGAPYHSQESNLK 240
S + +++ P+REL Q+ + E + G L GGA QE LK
Sbjct: 181 SSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQLVGGANRMRQEEALK 240
Query: 241 RGV-DIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERIL-------- 291
+ IV+GTPGRI + + L RF VLDE DE+L F ED+ RIL
Sbjct: 241 KNKPAIVVGTPGRIAEISKGGKLHTHGCRFLVLDEVDELLSFNFREDIHRILEHVGKRSG 300
Query: 292 ----GEVDDVNRVQTLLFSATLPVWV 313
GEVD+ QT+L SAT+P V
Sbjct: 301 AGPKGEVDERANRQTILVSATVPFSV 326
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 103/193 (53%), Gaps = 20/193 (10%)
Query: 133 GIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTGYGRS 192
G E+ +QA IL G D++ A TG GKT+A++ P++ L KV R G
Sbjct: 49 GFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYLAPLIHHLQGHSPKVDRSHG---- 104
Query: 193 PSVLVLLPTRELATQVFADFE-VYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVIGTPG 251
LV++PTREL QV+ E + + + GG +++ L++G+ I+I TPG
Sbjct: 105 TFALVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEKKAKEKARLRKGISILIATPG 164
Query: 252 RIKDHIERQNLDLSK-LRFRVLDEADEMLRMGFVEDVERIL----------GEVDDVN-- 298
R+ DH++ + K LR+ + DEAD +L +G+ +++E+I+ GE DD+
Sbjct: 165 RLLDHLKNTASFVHKNLRWVIFDEADSILELGYGKEIEQIIKLLGSGQNEQGEEDDIVPK 224
Query: 299 --RVQTLLFSATL 309
+ Q LL SATL
Sbjct: 225 GIQKQNLLLSATL 237
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 102/194 (52%), Gaps = 15/194 (7%)
Query: 121 ISEPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGP 180
+SE + L + G E P+QA T + D+V A TG GKTLAF+LP +E
Sbjct: 23 LSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEI----- 77
Query: 181 GKVARKTGYGRSPSV---LVLLPTRELATQVFADFEVYGSAM-GLNACCLYGGAPYHSQE 236
+ R Y P +++ PTREL+ Q+ E + S + +N+ L GG +
Sbjct: 78 --IRRSNSYPPKPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVEADM 135
Query: 237 SNL-KRGVDIVIGTPGRIKDHIER-QNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEV 294
+ L + G +++IGTPGR+ D ++R + LD L +LDEAD +L MGF + V I+ +
Sbjct: 136 NTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRL 195
Query: 295 DDVNRVQTLLFSAT 308
R T LFSAT
Sbjct: 196 PKQRR--TGLFSAT 207
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 120/240 (50%), Gaps = 6/240 (2%)
Query: 122 SEPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPG 181
SE + LK++ + IQAM F ++DG + ++G GKTLA+++P+++ L
Sbjct: 382 SEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVIQRLREEEL 441
Query: 182 KVARKTGYGRSPSVLVLLPTRELATQVFADFE-VYGSAMGLNACCLYGGAPYHSQESNLK 240
+ K+ G P V+VL+PT ELA+QV A+ + S + + + GG +Q NL+
Sbjct: 442 QGHSKSSPG-CPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGFRQRTQLENLE 500
Query: 241 RGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRV 300
+GVD++I TPGR + L LS LR +LDE D + E + L V
Sbjct: 501 QGVDVLIATPGRFTYLMNEGILGLSNLRCAILDEVDILFGDDEFEAALQNLINSSPVT-A 559
Query: 301 QTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVRHIVLPCSSSARAQLIPD 360
Q L +ATLP+ +I K ++ ++G + S + ++ CS A+ P+
Sbjct: 560 QYLFVTATLPL---EIYNKLVEVFPDCEVVMGPRVHRVSNALEEFLVDCSGDDNAEKTPE 616
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 96/192 (50%), Gaps = 13/192 (6%)
Query: 133 GIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTGYGRS 192
G E IQ G D++ +A++G GKT F +L+ L +
Sbjct: 60 GFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDISLVQC--------- 110
Query: 193 PSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVIGTPGR 252
LVL PTRELA Q+ G +G+ A GG + L+ GV +V+GTPGR
Sbjct: 111 -QALVLAPTRELAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGVHVVVGTPGR 169
Query: 253 IKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQTLLFSATLPVW 312
+ D + RQ+L ++ VLDEADEML GF + + I + ++VQ +FSAT+P
Sbjct: 170 VFDLLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLP--SKVQVGVFSATMPPE 227
Query: 313 VKQISTKFL-KP 323
+I+ KF+ KP
Sbjct: 228 ALEITRKFMNKP 239
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 106/200 (53%), Gaps = 15/200 (7%)
Query: 129 LKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESL---TNGPGKVAR 185
L Q E P+QA T + D+ A TG GKTLAFV+P++E L T+ P K +
Sbjct: 31 LNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRSTSFPPKPHQ 90
Query: 186 KTGYGRSPSVLVLLPTRELATQVFADFEVYGSAMG-LNACCLYGGAPYHSQESNL-KRGV 243
G +++ PTREL+TQ++ + + S + +N+ L GG + + + G
Sbjct: 91 VMG-------VIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADMKIIEEEGC 143
Query: 244 DIVIGTPGRIKDHIERQN-LDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQT 302
+++IGTPGR+ D +ER LD L +LDEAD +L MGF V I+ + R T
Sbjct: 144 NVLIGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISRLPKQRR--T 201
Query: 303 LLFSATLPVWVKQISTKFLK 322
LFSAT V++++ L+
Sbjct: 202 GLFSATQTEGVEELAKAGLR 221
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 108/239 (45%), Gaps = 26/239 (10%)
Query: 140 IQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTGYGRSPSVLVLL 199
IQ IL G D++ +A++G GKT + + + + KV VLVL
Sbjct: 48 IQQRALVPILKGRDVIAQAQSGTGKTSMIAISVCQIVNISSRKV----------QVLVLS 97
Query: 200 PTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIER 259
P+RELA+Q + G+ + A GG L+RGV V GTPGR+ D I+R
Sbjct: 98 PSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGEDIKKLERGVHAVSGTPGRVYDMIKR 157
Query: 260 QNLDLSKLRFRVLDEADEMLRMGF---VEDVERILGEVDDVNRVQTLLFSATLPVWVKQI 316
+L ++ VLDE+DEML G + DV R L + +Q L SATLP + ++
Sbjct: 158 GSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALP-----HDIQVCLISATLPQEILEM 212
Query: 317 STKFL--------KPDKKTADLVGNEKMKASTNVRHIVLPCSSSARAQLIPDIIRCYSR 367
+ KF+ KPD+ T + + + C R + II C +R
Sbjct: 213 TEKFMTDPVRILVKPDELTLEGIKQYYVDVDKEEWKFDTLCDLYGRLTINQAIIFCNTR 271
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 96/193 (49%), Gaps = 13/193 (6%)
Query: 132 KGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTGYGR 191
+G E IQ G D++ +A++G GKT F +L+ L +
Sbjct: 52 RGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQC-------- 103
Query: 192 SPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVIGTPG 251
LVL PTRELA Q+ G +G+ GG + L+ GV +V+GTPG
Sbjct: 104 --QALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPG 161
Query: 252 RIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQTLLFSATLPV 311
R+ D ++RQ+L ++ VLDEADEML GF + + I + ++Q +FSAT+P
Sbjct: 162 RVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLP--PKIQVGVFSATMPP 219
Query: 312 WVKQISTKFL-KP 323
+I+ KF+ KP
Sbjct: 220 EALEITRKFMSKP 232
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 97/208 (46%), Gaps = 12/208 (5%)
Query: 114 NAVSRFRISEPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPIL 173
N + + L + +KG E PIQ + L G D++ RA+ G GKT AF +P+L
Sbjct: 131 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVL 190
Query: 174 ESLTNGPGKVARKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYH 233
E + + ++++PTRELA Q + G + + GG
Sbjct: 191 EKIDQDNNVI----------QAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLK 240
Query: 234 SQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGE 293
L + V +++GTPGRI D ++ L V+DEAD++L F VE ++
Sbjct: 241 DDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISF 300
Query: 294 VDDVNRVQTLLFSATLPVWVKQISTKFL 321
+ + Q L+FSAT PV VK +FL
Sbjct: 301 LPESR--QILMFSATFPVTVKDFKDRFL 326
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 97/208 (46%), Gaps = 12/208 (5%)
Query: 114 NAVSRFRISEPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPIL 173
N + + L + +KG E PIQ + L G D++ RA+ G GKT AF +P+L
Sbjct: 131 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVL 190
Query: 174 ESLTNGPGKVARKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYH 233
E + + ++++PTRELA Q + G + + GG
Sbjct: 191 EKIDQDNNVI----------QAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLK 240
Query: 234 SQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGE 293
L + V +++GTPGRI D ++ L V+DEAD++L F VE ++
Sbjct: 241 DDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISF 300
Query: 294 VDDVNRVQTLLFSATLPVWVKQISTKFL 321
+ + Q L+FSAT PV VK +FL
Sbjct: 301 LPESR--QILMFSATFPVTVKDFKDRFL 326
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 95/192 (49%), Gaps = 13/192 (6%)
Query: 133 GIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTGYGRS 192
G E IQ G D++ +A++G GKT F +L+ L +
Sbjct: 58 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQC--------- 108
Query: 193 PSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVIGTPGR 252
LVL PTRELA Q+ G +G+ GG + L+ GV +V+GTPGR
Sbjct: 109 -QALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGR 167
Query: 253 IKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQTLLFSATLPVW 312
+ D ++RQ+L ++ VLDEADEML GF + + I + ++Q +FSAT+P
Sbjct: 168 VFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLP--PKIQVGVFSATMPPE 225
Query: 313 VKQISTKFL-KP 323
+I+ KF+ KP
Sbjct: 226 ALEITRKFMSKP 237
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 95/192 (49%), Gaps = 13/192 (6%)
Query: 133 GIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTGYGRS 192
G E IQ G D++ +A++G GKT F +L+ L +
Sbjct: 48 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQC--------- 98
Query: 193 PSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVIGTPGR 252
LVL PTRELA Q+ G +G+ GG + L+ GV +V+GTPGR
Sbjct: 99 -QALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGR 157
Query: 253 IKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQTLLFSATLPVW 312
+ D ++RQ+L ++ VLDEADEML GF + + I + ++Q +FSAT+P
Sbjct: 158 VFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLP--PKIQVGVFSATMPPE 215
Query: 313 VKQISTKFL-KP 323
+I+ KF+ KP
Sbjct: 216 ALEITRKFMSKP 227
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 95/192 (49%), Gaps = 13/192 (6%)
Query: 133 GIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTGYGRS 192
G E IQ G D++ +A++G GKT F +L+ L +
Sbjct: 58 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQC--------- 108
Query: 193 PSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVIGTPGR 252
LVL PTRELA Q+ G +G+ GG + L+ GV +V+GTPGR
Sbjct: 109 -QALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGR 167
Query: 253 IKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQTLLFSATLPVW 312
+ D ++RQ+L ++ VLDEADEML GF + + I + ++Q +FSAT+P
Sbjct: 168 VFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLP--PKIQVGVFSATMPPE 225
Query: 313 VKQISTKFL-KP 323
+I+ KF+ KP
Sbjct: 226 ALEITRKFMSKP 237
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 98/202 (48%), Gaps = 23/202 (11%)
Query: 125 LRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVA 184
LR + + G E IQ IL G D++ +A++G GKT L + + +
Sbjct: 47 LRGVY-EYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVCQVVDTS----- 100
Query: 185 RKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVD 244
R L+L PTRELATQ + G + A GG L+ GV
Sbjct: 101 -----SREVQALILSPTRELATQTEKTIQAIGLHANIQAHACIGGNSVGEDIRKLEHGVH 155
Query: 245 IVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNR----- 299
+V GTPGR+ D I+R++L ++ +LDE+DEML GF + ++ DV R
Sbjct: 156 VVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKD-------QIYDVYRYLPPD 208
Query: 300 VQTLLFSATLPVWVKQISTKFL 321
+Q L SATLP + ++++KF+
Sbjct: 209 LQVCLVSATLPHEILEMTSKFM 230
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 94/193 (48%), Gaps = 13/193 (6%)
Query: 132 KGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTGYGR 191
+G E IQ G D++ +A++G GKT F +L+ L +
Sbjct: 52 RGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQC-------- 103
Query: 192 SPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVIGTPG 251
LVL PTRELA Q+ G G+ GG + L+ GV +V+GTPG
Sbjct: 104 --QALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPG 161
Query: 252 RIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQTLLFSATLPV 311
R+ D + RQ+L ++ VLDEADEML GF + + I + ++Q +FSAT+P
Sbjct: 162 RVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLP--PKIQVGVFSATMPP 219
Query: 312 WVKQISTKFL-KP 323
+I+ KF+ KP
Sbjct: 220 EALEITRKFMSKP 232
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 96/198 (48%), Gaps = 13/198 (6%)
Query: 125 LRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVA 184
LR I +KG E PIQ + L G+D++ RA+ G GKT AF +P LE + +
Sbjct: 166 LRGIY-EKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEKIDPENNVI- 223
Query: 185 RKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVD 244
++L+PTRELA Q + + + GG L + V
Sbjct: 224 ---------QAVILVPTRELALQTSQVCKELSKYLKIEVMVTTGGTSLRDDIMRLYQPVH 274
Query: 245 IVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQTLL 304
+++GTPGRI D ++ L V+DEAD++L + F +E ++ + + Q L+
Sbjct: 275 LLVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSVEFQPSIEELIQFLPESR--QILM 332
Query: 305 FSATLPVWVKQISTKFLK 322
FSAT PV VK ++LK
Sbjct: 333 FSATFPVTVKSFKDRYLK 350
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 100/198 (50%), Gaps = 9/198 (4%)
Query: 121 ISEPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGP 180
IS+ + LK + +Q+ L G D++G ARTG GKTLAFV+PILE L
Sbjct: 78 ISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEKLHR-- 135
Query: 181 GKVARKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLK 240
+ + + G G +++ PTRELA Q F G +A L GG E
Sbjct: 136 ERWSPEDGVG----CIIISPTRELAAQTFGVLNKVGKFHKFSAGLLIGGREGVDVEKERV 191
Query: 241 RGVDIVIGTPGRIKDHI-ERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNR 299
++I++ PGR+ H+ E N + +L+ +LDEAD +L F ++ I+ ++
Sbjct: 192 HEMNILVCAPGRLLQHMDETPNFECPQLQILILDEADRVLDSAFKGQLDPIISQLP--KH 249
Query: 300 VQTLLFSATLPVWVKQIS 317
QTLLFSAT VK ++
Sbjct: 250 RQTLLFSATQTKKVKDLA 267
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 93/192 (48%), Gaps = 13/192 (6%)
Query: 133 GIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTGYGRS 192
G E IQ G D++ +A++G GKT F +L+ L +
Sbjct: 58 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQC--------- 108
Query: 193 PSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDIVIGTPGR 252
LVL PTRELA Q+ G G+ GG + L+ GV +V+GTPGR
Sbjct: 109 -QALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGR 167
Query: 253 IKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQTLLFSATLPVW 312
+ D + RQ+L ++ VLDEADEML GF + + I + ++Q +FSAT+P
Sbjct: 168 VFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLP--PKIQVGVFSATMPPE 225
Query: 313 VKQISTKFL-KP 323
+I+ KF+ KP
Sbjct: 226 ALEITRKFMSKP 237
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 12/209 (5%)
Query: 114 NAVSRFRISEPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPIL 173
N + + L + +KG E PIQ + L G+D++ RA+ G GKT AF +P+L
Sbjct: 124 NEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVL 183
Query: 174 ESLTNGPGKVARKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYH 233
E + + ++L+PTRELA Q + + + GG
Sbjct: 184 EKIDPNNNVI----------QAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLR 233
Query: 234 SQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGE 293
L + V +++GTPGRI D ++ L V+DEAD++L F +E ++
Sbjct: 234 DDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQF 293
Query: 294 VDDVNRVQTLLFSATLPVWVKQISTKFLK 322
+ NR Q L+FSAT PV VK + L+
Sbjct: 294 LPQ-NR-QFLMFSATFPVTVKAFKDRHLR 320
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 12/209 (5%)
Query: 114 NAVSRFRISEPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPIL 173
N + + L + +KG E PIQ + L G+D++ RA+ G GKT AF +P+L
Sbjct: 124 NEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVL 183
Query: 174 ESLTNGPGKVARKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYH 233
E + + ++L+PTRELA Q + + + GG
Sbjct: 184 EKIDPNNNVI----------QAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLR 233
Query: 234 SQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGE 293
L + V +++GTPGRI D ++ L V+DEAD++L F +E ++
Sbjct: 234 DDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQF 293
Query: 294 VDDVNRVQTLLFSATLPVWVKQISTKFLK 322
+ NR Q L+FSAT PV VK + L+
Sbjct: 294 LPQ-NR-QFLMFSATFPVTVKAFKDRHLR 320
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 85/169 (50%), Gaps = 20/169 (11%)
Query: 140 IQAMTFD-TILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVAR------------- 185
IQ F+ G D++G A TG GKTLAF LPIL+ L + KV +
Sbjct: 216 IQKACFNVAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDEREKVGKLYALKGEEAQKYA 275
Query: 186 KTGYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKRGVDI 245
GY R+ L++ PTRELA QV E + + + GG QE LK +I
Sbjct: 276 ADGYLRA---LIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSEKQERRLKEKPEI 332
Query: 246 VIGTPGRIKDHI---ERQNLDLSKLRFRVLDEADEMLRMGFVEDVERIL 291
V+ TPGR+ + + E+ ++L L F VLDEAD M+ G +++ IL
Sbjct: 333 VVATPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSIL 381
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 92/185 (49%), Gaps = 35/185 (18%)
Query: 125 LRAILKQKGIESLFPIQ-AMTFDTILDGA---DMVGRARTGQGKTLAFVLPILESLTNGP 180
L+ L+ GI SLFP+Q A+ +TI G D+ + TG GKTL++ LPI++ L + P
Sbjct: 42 LKKALENMGISSLFPVQVAVWHETIGPGGFERDICVNSPTGSGKTLSYALPIVQLLASRP 101
Query: 181 GKVARKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYG------------ 228
+ R LV+LPTR+LA QV F+ A+GL+ G
Sbjct: 102 VRCLR---------ALVVLPTRDLALQVKDVFDAIAPAVGLSVGSAVGQSSIAGEISQLI 152
Query: 229 -------GAPYHSQE--SNLKRGVDIVIGTPGRIKDHIER-QNLDLSKLRFRVLDEADEM 278
G Y + NL+ VDI++ TPGR+ DHI + L LR+ V+DE D +
Sbjct: 153 KTPKLDAGICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDRL 212
Query: 279 LRMGF 283
LR +
Sbjct: 213 LREAY 217
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 111/223 (49%), Gaps = 28/223 (12%)
Query: 121 ISEPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGP 180
+SE + L + G E P+QA T + D+V A TG GKTLAF+LP +E
Sbjct: 24 LSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEI----- 78
Query: 181 GKVARKTGYGRSPSV---LVLLPTRELATQVFADFEVYGSAMGLN-ACCLYGGAPYHSQE 236
+ R Y P +++ PTREL+ Q+ A+ L+ A C A ++ E
Sbjct: 79 --IRRSNSYPPKPHQVMGVIISPTRELSAQIHK----VARAVRLDFAKCREVEADMNTLE 132
Query: 237 SNLKRGVDIVIGTPGRIKDHIER-QNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVD 295
+ G +++IGTPGR+ D ++R + LD L +LDEAD +L MGF + V I+ +
Sbjct: 133 ---EEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLP 189
Query: 296 DVNRVQTLLFSATLPVWVKQISTKFLK-------PDKKTADLV 331
R T LFSAT V ++ L+ D+K++ LV
Sbjct: 190 KQRR--TGLFSATQTQAVADLAKAGLRNPYLKCEADQKSSQLV 230
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 99/203 (48%), Gaps = 16/203 (7%)
Query: 123 EPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGK 182
E LRAI+ G E +Q + G D++ +A++G GKT FVL L+ + PG+
Sbjct: 56 ELLRAIV-DSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQ 114
Query: 183 VARKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAM-GLNACCLYGGAPYHSQESNLKR 241
V S LVL TRELA Q+ +F + + + YGG + LK
Sbjct: 115 V----------SALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKN 164
Query: 242 GV-DIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLR-MGFVEDVERILGEVDDVNR 299
IV+GTPGR+ ++L L +R +LDE D+ML + DV+ I +
Sbjct: 165 ECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTP--HD 222
Query: 300 VQTLLFSATLPVWVKQISTKFLK 322
Q ++FSATL ++ + KF++
Sbjct: 223 KQVMMFSATLSKEIRPVCKKFMQ 245
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 99/203 (48%), Gaps = 16/203 (7%)
Query: 123 EPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGK 182
E LRAI+ G E +Q + G D++ +A++G GKT FVL L+ + PG+
Sbjct: 56 ELLRAIV-DSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQ 114
Query: 183 VARKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAM-GLNACCLYGGAPYHSQESNLKR 241
V S LVL TRELA Q+ +F + + + YGG + LK
Sbjct: 115 V----------SALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKN 164
Query: 242 GV-DIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLR-MGFVEDVERILGEVDDVNR 299
IV+GTPGR+ ++L L +R +LDE D+ML + DV+ I +
Sbjct: 165 ECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTP--HD 222
Query: 300 VQTLLFSATLPVWVKQISTKFLK 322
Q ++FSATL ++ + KF++
Sbjct: 223 KQVMMFSATLSKEIRPVCKKFMQ 245
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 123 EPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGK 182
E LRAI+ G E +Q + G D++ +A++G GKT FVL L+ + PG+
Sbjct: 56 ELLRAIV-DSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQ 114
Query: 183 VARKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAM-GLNACCLYGGAPYHSQESNLKR 241
V S LVL TRELA Q+ +F + + + YGG + LK
Sbjct: 115 V----------SALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKN 164
Query: 242 GV-DIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLR-MGFVEDVERILGEVDDVNR 299
IV+GTPGR+ ++L L +R +LDE D+ML + DV+ I +
Sbjct: 165 ECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTP--HD 222
Query: 300 VQTLLFSATLPVWVKQISTKFLKPDKKT 327
Q ++FSATL ++ + KF++ +T
Sbjct: 223 KQVMMFSATLSKEIRPVCKKFMQDGLRT 250
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 103/215 (47%), Gaps = 22/215 (10%)
Query: 123 EPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGK 182
E LRAI+ G E +Q + G D++ +A++G GKT FVL L+ + PG+
Sbjct: 56 ELLRAIV-DSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQ 114
Query: 183 VARKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAM-GLNACCLYGGAPYHSQESNLKR 241
V S LVL TRELA Q+ +F + + + YGG + LK
Sbjct: 115 V----------SALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKN 164
Query: 242 GV-DIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLR-MGFVEDVERILGEVDDVNR 299
IV+GTPGR+ ++L L +R +LDE D+ML + DV+ I +
Sbjct: 165 ECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTP--HD 222
Query: 300 VQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNE 334
Q ++FSATL ++ + KF++ D + NE
Sbjct: 223 KQVMMFSATLSKEIRPVCKKFMQ------DFLENE 251
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 87/173 (50%), Gaps = 15/173 (8%)
Query: 153 DMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTGYGRSPSVLVLLPTRELATQVFADF 212
D++ +A++G GKT FVL L+ + PG+V S LVL TRELA Q+ +F
Sbjct: 2 DVICQAKSGMGKTAVFVLSTLQQIEPSPGQV----------SALVLCHTRELAYQICNEF 51
Query: 213 EVYGSAM-GLNACCLYGGAPYHSQESNLKRGV-DIVIGTPGRIKDHIERQNLDLSKLRFR 270
+ + + YGG + LK IV+GTPGR+ ++L L +R
Sbjct: 52 VRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHF 111
Query: 271 VLDEADEMLR-MGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLK 322
+LDE D+ML + DV+ I + Q ++FSATL ++ + KF++
Sbjct: 112 ILDECDKMLESLDMRRDVQEIFKMTP--HDKQVMMFSATLSKEIRPVCKKFMQ 162
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 114/249 (45%), Gaps = 13/249 (5%)
Query: 113 PNAVSRFRISEPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPI 172
P + + L L +KGIE IQ IL+G D+V RA+TG GKTLA++LP+
Sbjct: 45 PKSFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPL 104
Query: 173 LESLTNGPGKVARKTGYGRSPSVLVLLPTRELATQVFADFE--VYGSAMGLNACCLYGGA 230
L+ L + +K +PS +L+P+REL QV+ + + + L A L
Sbjct: 105 LQKLFSADSVSKKKL----APSAFILVPSRELCQQVYTEVSSLIELCRVQLKAVQLTSSM 160
Query: 231 PYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLS----KLRFRVLDEADEMLRMGFVED 286
+ L +I++ TP I L+ + L VLDEAD +L G+ ++
Sbjct: 161 SASDMRNALAGLPEILVSTPACIPKCFAAGVLEPTAVSESLSILVLDEADLLLSYGYEDN 220
Query: 287 VERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKA-STNVRHI 345
+ + + R Q LL SAT V+++ L N+K +A +NV+
Sbjct: 221 LRSVTSIIP--RRCQCLLMSATTSSDVEKLKKLILHNPIVLTLTEDNDKEEAVPSNVQQF 278
Query: 346 VLPCSSSAR 354
+ CS+ +
Sbjct: 279 WISCSAQDK 287
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 123 EPLRAILKQKGIESLFPIQAMTFDTILD--GADMVGRARTGQGKTLAFVLPILESLTNGP 180
E ++ + + E IQA++ I+ ++ +A G GKT FVL
Sbjct: 101 ELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHLIAQAHNGSGKTTCFVL---------- 150
Query: 181 GKVARKTGYGRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLY----GGAPYHSQE 236
G ++R R P L + PTRELA Q + G G+ A GAP ++
Sbjct: 151 GMLSRVDPTLREPQALCICPTRELANQNMEVLQKMGKFTGITAELAVPDSTRGAPAATRG 210
Query: 237 SNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRM-GFVEDVERILGEVD 295
+ + +VIGTPG +K + + L L+ L+ V DEAD ML GF +D +I+ ++
Sbjct: 211 APV--SAHVVIGTPGTLKKWMAFKRLGLNHLKILVFDEADHMLATDGFRDDSLKIMKDIG 268
Query: 296 DVN-RVQTLLFSATLPVWVKQISTKFLK 322
VN Q LLFSAT VK + +K
Sbjct: 269 RVNPNFQVLLFSATFNETVKDFVARTVK 296
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 16/191 (8%)
Query: 129 LKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPGKVARKTG 188
L + G + PIQ +L G + A TG GKT AF+ P+L L R
Sbjct: 156 LAELGFKEPTPIQRQAIPILLSGRECFACAPTGSGKTFAFICPMLIKLKRPSTDGIR--- 212
Query: 189 YGRSPSVLVLLPTRELATQVFADFEVYGSAM--GLNACCLYGGAPYHSQESNLKRGVDIV 246
++L P RELA Q + G + G N P K D++
Sbjct: 213 ------AVILSPARELAAQTARE----GKKLIKGSNFHIRLMTKPLVKTADFSKLWCDVL 262
Query: 247 IGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQTLLFS 306
I TP R+K I+ + +DLSK+ + VLDE+D++ ++ ++ ++ + + +++ LFS
Sbjct: 263 ISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLFEQSLLKQIDCVVKACSNPSIIRS-LFS 321
Query: 307 ATLPVWVKQIS 317
ATLP V++++
Sbjct: 322 ATLPDSVEELA 332
>AT5G08110.1 | Symbols: | nucleic acid binding;ATP-dependent
helicases;ATP binding;helicases;ATP-dependent helicases
| chr5:2594854-2600114 REVERSE LENGTH=1141
Length = 1141
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 21/164 (12%)
Query: 120 RISEPLRAILKQKGIESLFPIQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNG 179
++SE ++ LK+ G+ +L+ QA L G ++ T GK+L + +P+ E L
Sbjct: 377 KLSETTKSALKRIGLNTLYSHQAEAISAALAGKNVAVATMTSSGKSLCYNVPVFEELCKD 436
Query: 180 PGKVARKTGYGRSPSVLVLLPTRELAT---QVFADFEVYGSAMGLNACCLYGGAPYHSQE 236
A L L PT+ LA + +D + G +N G PY +
Sbjct: 437 TNSCA-----------LYLFPTKALAQDQLRALSDL-IKGFEASINMGVYDGDTPYKDR- 483
Query: 237 SNLKRGVDIVIGTPGR-----IKDHIERQNLDLSKLRFRVLDEA 275
+ L+ ++I P ++ H E+ + LS LR+ V+DEA
Sbjct: 484 TRLRSNARLLITNPDMLHISILRRHKEQFSRILSNLRYIVIDEA 527
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 19/196 (9%)
Query: 124 PLRAILKQKGIESLFP--IQAMTFDTILDGADMVGRARTGQGKTLAFVLPILESLTNGPG 181
P + + + I +FP IQ T+ G D + A+TG GKTL ++L I SL N P
Sbjct: 84 PEHILHRMEEIGFVFPTDIQREALPTLFTGRDCILHAQTGSGKTLTYLLLIF-SLIN-PQ 141
Query: 182 KVARKTGYGRSPSVLVLLPTRELATQV--FADFEVYGSAMGLNAC---CLYGGAPYHSQE 236
+ S ++++PTREL QV A S + + C L G +
Sbjct: 142 R--------SSVQAVIVVPTRELGMQVTKVARMLAAKSEIDVKGCTVMALLDGGTLRRHK 193
Query: 237 SNLK-RGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGF-VEDVERILGEV 294
S LK I++ T + +E+ + +R V+DE D + V V ++L
Sbjct: 194 SWLKAEPPAILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSF 253
Query: 295 DDVNRVQTLLFSATLP 310
++ QT+ SA++P
Sbjct: 254 SSCDKRQTVFASASIP 269
>AT2G28600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:12251845-12254672
FORWARD LENGTH=502
Length = 502
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 190 GRSPSVLVLLPTRELATQVFADFEVYGSAMGLNACCLYGGAPYHSQESNLKR-GVDIVIG 248
G SP +L L+P++ A+QV + + +G++ L+ GAP Q S LK + ++
Sbjct: 194 GNSPFLLYLVPSQSKASQVRSVCKAL-KGIGIHTVSLHQGAPLDHQISGLKSVEPEFIVA 252
Query: 249 TPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQTLLFSAT 308
TP R+ + + + +D+S + V+DE + G++ V+ I + ++ QT++F+ +
Sbjct: 253 TPERLLEIVTLKGVDISNVSLLVIDELGSLCSGGYLNAVKSIKQAIS--SKHQTIVFNNS 310
Query: 309 L 309
Sbjct: 311 F 311