Miyakogusa Predicted Gene
- Lj0g3v0245039.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0245039.1 tr|Q9M6R6|Q9M6R6_VIGRR RNA helicase OS=Vigna
radiata var. radiata GN=VRH1 PE=2 SV=1,82.12,0,no description,NULL;
P-loop containing nucleoside triphosphate hydrolases,NULL;
DEAD_ATP_HELICASE,RN,CUFF.16049.1
(425 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 625 e-179
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 265 3e-71
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 265 4e-71
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 265 4e-71
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 234 7e-62
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 231 1e-60
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 179 3e-45
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 179 3e-45
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 178 7e-45
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 176 2e-44
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 175 5e-44
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 174 9e-44
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 174 1e-43
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 174 1e-43
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 174 1e-43
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 174 1e-43
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 168 6e-42
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 168 7e-42
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 164 8e-41
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 164 8e-41
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 164 8e-41
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 149 5e-36
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 140 2e-33
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 136 3e-32
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 135 4e-32
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 135 4e-32
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 135 7e-32
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 134 1e-31
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 133 2e-31
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 132 4e-31
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 127 1e-29
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 127 2e-29
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 126 3e-29
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 126 3e-29
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 125 5e-29
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 124 9e-29
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 124 1e-28
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 124 1e-28
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 124 1e-28
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 124 2e-28
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 123 2e-28
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 123 2e-28
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 118 7e-27
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 116 3e-26
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 115 8e-26
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 113 3e-25
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 112 5e-25
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 110 1e-24
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 110 2e-24
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 110 2e-24
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 108 5e-24
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 108 8e-24
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 108 9e-24
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 108 1e-23
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 107 2e-23
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 104 1e-22
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 103 2e-22
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 103 2e-22
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 102 4e-22
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 102 5e-22
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 102 5e-22
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 102 6e-22
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 101 8e-22
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 101 8e-22
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 99 4e-21
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 99 4e-21
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 99 4e-21
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 97 3e-20
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 96 5e-20
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 94 1e-19
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 87 3e-17
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 85 1e-16
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 75 1e-13
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 67 2e-11
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 67 3e-11
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 60 3e-09
AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosph... 60 3e-09
AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 56 5e-08
AT1G35530.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 49 6e-06
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 625 bits (1613), Expect = e-179, Method: Compositional matrix adjust.
Identities = 302/426 (70%), Positives = 360/426 (84%), Gaps = 1/426 (0%)
Query: 1 MGLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEM 60
+GL++CCLYGG Y QE LKRGVDIV+GTPGRIKDHIERQNLD S L+FRVLDEADEM
Sbjct: 201 LGLSSCCLYGGDSYPVQEGKLKRGVDIVVGTPGRIKDHIERQNLDFSYLQFRVLDEADEM 260
Query: 61 LRMGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKA 120
LRMGFVEDVE ILG+V+D +VQTLLFSATLP WVK IS +FLK D+KT DLVGN+KMKA
Sbjct: 261 LRMGFVEDVELILGKVEDSTKVQTLLFSATLPSWVKNISNRFLKRDQKTIDLVGNDKMKA 320
Query: 121 STNVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLPGARALHGDI 180
S +VRHI +PC+ +A A+LIPDII CYSSGG+TIIF E K SEL+GLL G+RALHG+I
Sbjct: 321 SNSVRHIAIPCNKAAMARLIPDIISCYSSGGQTIIFAETKVQVSELSGLLDGSRALHGEI 380
Query: 181 QQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRA 240
QSQRE+TL GFR+GKF TLVATNVAARGLDINDVQLIIQCEPPR+VEAYIHRSGRTGRA
Sbjct: 381 PQSQREVTLAGFRNGKFATLVATNVAARGLDINDVQLIIQCEPPREVEAYIHRSGRTGRA 440
Query: 241 GNTGVAVMLYDPRKSNFSKIERESGVKFEHISAPQPDDIAKAVGGEAAELIIQVSDSVVP 300
GNTGVAV LYD RKS+ S+IE+E+G+KFEH++APQPD+IA++ G EAAE + QV DSVVP
Sbjct: 441 GNTGVAVTLYDSRKSSVSRIEKEAGIKFEHLAAPQPDEIARSGGMEAAEKVKQVCDSVVP 500
Query: 301 AFKSVAEDLLKNSGLSAVEXXXXXXXXXVGFTDIKKRSLLTSMENYVTLLLETGRSIHTP 360
AF A++LL+ SGLSA GFT+IKKRSLLTSMENYVTL LE G+ I++P
Sbjct: 501 AFLEAAKELLETSGLSAEVLLAKALAKTAGFTEIKKRSLLTSMENYVTLHLEAGKPIYSP 560
Query: 361 SYAFGILRRFVPEEKVDGVQGLSLTADGTGAVFDVPANDLDAFLAG-QKNAGNVSLEEVK 419
S+ +G+LRR +P++KV+ ++GLSLTAD TGAVFDV +DLD F+AG QK+AG++SLE VK
Sbjct: 561 SFVYGLLRRVLPDDKVEMIEGLSLTADKTGAVFDVKQSDLDLFIAGAQKSAGSMSLEVVK 620
Query: 420 LLPRLQ 425
++P+LQ
Sbjct: 621 VMPKLQ 626
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 265 bits (678), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 169/438 (38%), Positives = 244/438 (55%), Gaps = 27/438 (6%)
Query: 3 LNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLR 62
L+ C+YGG Y Q+S L RGVD+V+GTPGRI D IE ++L L ++ + VLDEAD+ML
Sbjct: 114 LSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLA 173
Query: 63 MGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKAST 122
+GF E VE IL + + Q++LFSAT+P WVK+++ K+L + DLVG++ K +
Sbjct: 174 VGFEEAVESILENLP--TKRQSMLFSATMPTWVKKLARKYLD-NPLNIDLVGDQDEKLAE 230
Query: 123 NVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLPGA---RALHGD 179
++ + +S+++ ++ D+I Y+ GG+TI+FT+ K A E++ L + ALHGD
Sbjct: 231 GIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHGD 290
Query: 180 IQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGR 239
I Q QRE TL FR GKF LVAT+VA+RGLDI +V L+I E P D E ++HRSGRTGR
Sbjct: 291 ISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGR 350
Query: 240 AGNTGVAVMLY-DPRKSNFSKIERESGVKFEHISAPQPDDIAKAVGGEAAELIIQVSDSV 298
AG G A++++ +K +ER+ G FE IS P D+ ++ + + V
Sbjct: 351 AGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPTVGDLLESSADQVVATLNGVHPDS 410
Query: 299 VPAFKSVAEDLLKNSGLSAVEXXXXXXXXXVGFTD-IKKRSLLTSMENYVTLLLETGRSI 357
+ F + A+ L + G + GF+ RSLL+ + +VTL L I
Sbjct: 411 IKFFSATAQKLYEEKG---TDALAAALAHLSGFSQPPSSRSLLSHEKGWVTLQL-----I 462
Query: 358 HTPSYAFGILRR-----FVPE---EKVDGVQGLSLTADG--TGAVFDVPANDLDAFLAGQ 407
P+ A G L F+ + D V + L AD GAVFD+P L
Sbjct: 463 RDPTNARGFLSARSVTGFLSDLYRTAADEVGKIFLIADDRIQGAVFDLPEEIAKELLEKD 522
Query: 408 KNAGNVSLEEVKLLPRLQ 425
GN SL + LP LQ
Sbjct: 523 VPEGN-SLSMITKLPPLQ 539
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 169/438 (38%), Positives = 244/438 (55%), Gaps = 27/438 (6%)
Query: 3 LNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLR 62
L+ C+YGG Y Q+S L RGVD+V+GTPGRI D IE ++L L ++ + VLDEAD+ML
Sbjct: 207 LSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLA 266
Query: 63 MGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKAST 122
+GF E VE IL + + Q++LFSAT+P WVK+++ K+L + DLVG++ K +
Sbjct: 267 VGFEEAVESILENLP--TKRQSMLFSATMPTWVKKLARKYLD-NPLNIDLVGDQDEKLAE 323
Query: 123 NVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLPGA---RALHGD 179
++ + +S+++ ++ D+I Y+ GG+TI+FT+ K A E++ L + ALHGD
Sbjct: 324 GIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHGD 383
Query: 180 IQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGR 239
I Q QRE TL FR GKF LVAT+VA+RGLDI +V L+I E P D E ++HRSGRTGR
Sbjct: 384 ISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGR 443
Query: 240 AGNTGVAVMLY-DPRKSNFSKIERESGVKFEHISAPQPDDIAKAVGGEAAELIIQVSDSV 298
AG G A++++ +K +ER+ G FE IS P D+ ++ + + V
Sbjct: 444 AGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPTVGDLLESSADQVVATLNGVHPDS 503
Query: 299 VPAFKSVAEDLLKNSGLSAVEXXXXXXXXXVGFTD-IKKRSLLTSMENYVTLLLETGRSI 357
+ F + A+ L + G + GF+ RSLL+ + +VTL L I
Sbjct: 504 IKFFSATAQKLYEEKG---TDALAAALAHLSGFSQPPSSRSLLSHEKGWVTLQL-----I 555
Query: 358 HTPSYAFGILRR-----FVPE---EKVDGVQGLSLTADG--TGAVFDVPANDLDAFLAGQ 407
P+ A G L F+ + D V + L AD GAVFD+P L
Sbjct: 556 RDPTNARGFLSARSVTGFLSDLYRTAADEVGKIFLIADDRIQGAVFDLPEEIAKELLEKD 615
Query: 408 KNAGNVSLEEVKLLPRLQ 425
GN SL + LP LQ
Sbjct: 616 VPEGN-SLSMITKLPPLQ 632
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 169/438 (38%), Positives = 244/438 (55%), Gaps = 27/438 (6%)
Query: 3 LNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLR 62
L+ C+YGG Y Q+S L RGVD+V+GTPGRI D IE ++L L ++ + VLDEAD+ML
Sbjct: 207 LSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLA 266
Query: 63 MGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKAST 122
+GF E VE IL + + Q++LFSAT+P WVK+++ K+L + DLVG++ K +
Sbjct: 267 VGFEEAVESILENLP--TKRQSMLFSATMPTWVKKLARKYLD-NPLNIDLVGDQDEKLAE 323
Query: 123 NVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLPGA---RALHGD 179
++ + +S+++ ++ D+I Y+ GG+TI+FT+ K A E++ L + ALHGD
Sbjct: 324 GIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHGD 383
Query: 180 IQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGR 239
I Q QRE TL FR GKF LVAT+VA+RGLDI +V L+I E P D E ++HRSGRTGR
Sbjct: 384 ISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGR 443
Query: 240 AGNTGVAVMLY-DPRKSNFSKIERESGVKFEHISAPQPDDIAKAVGGEAAELIIQVSDSV 298
AG G A++++ +K +ER+ G FE IS P D+ ++ + + V
Sbjct: 444 AGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPTVGDLLESSADQVVATLNGVHPDS 503
Query: 299 VPAFKSVAEDLLKNSGLSAVEXXXXXXXXXVGFTD-IKKRSLLTSMENYVTLLLETGRSI 357
+ F + A+ L + G + GF+ RSLL+ + +VTL L I
Sbjct: 504 IKFFSATAQKLYEEKG---TDALAAALAHLSGFSQPPSSRSLLSHEKGWVTLQL-----I 555
Query: 358 HTPSYAFGILRR-----FVPE---EKVDGVQGLSLTADG--TGAVFDVPANDLDAFLAGQ 407
P+ A G L F+ + D V + L AD GAVFD+P L
Sbjct: 556 RDPTNARGFLSARSVTGFLSDLYRTAADEVGKIFLIADDRIQGAVFDLPEEIAKELLEKD 615
Query: 408 KNAGNVSLEEVKLLPRLQ 425
GN SL + LP LQ
Sbjct: 616 VPEGN-SLSMITKLPPLQ 632
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 234 bits (598), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 123/273 (45%), Positives = 177/273 (64%), Gaps = 7/273 (2%)
Query: 3 LNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLR 62
L+ CLYGG P Q L GVD+ +GTPGR+ D ++R L+LS+++F VLDEAD+ML+
Sbjct: 205 LDTICLYGGTPIGQQMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQ 264
Query: 63 MGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKAST 122
+GF EDVE IL ++ + + Q+++FSAT+P W++ ++ K+L + T DLVG+ K +
Sbjct: 265 VGFAEDVEIILEKLPE--KRQSMMFSATMPSWIRSLTKKYLN-NPLTVDLVGDSDQKLAD 321
Query: 123 NVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLPGA---RALHGD 179
+ + S RA +I ++ ++ GG+ I+FT+ K A L+ L + ALHGD
Sbjct: 322 GITTYSIIADSYGRASIIGPLVTEHAKGGKCIVFTQTKRDADRLSYALARSFKCEALHGD 381
Query: 180 IQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGR 239
I QSQRE TL GFR G F LVAT+VAARGLD+ +V LII E P + E ++HR+GRTGR
Sbjct: 382 ISQSQRERTLAGFRDGHFNILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGR 441
Query: 240 AGNTGVAVMLYDPRKSNFSK-IERESGVKFEHI 271
AG G A+++Y +S K IERE G +F +
Sbjct: 442 AGKKGSAILIYSQDQSRAVKIIEREVGSRFTEL 474
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/273 (43%), Positives = 177/273 (64%), Gaps = 7/273 (2%)
Query: 3 LNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLR 62
L+ CLYGG P Q L G+D+ +GTPGRI D ++R L+LS+++F VLDEAD+ML+
Sbjct: 217 LDTICLYGGTPIGQQMRELNYGIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQ 276
Query: 63 MGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKAST 122
+GF EDVE IL ++ + Q+++FSAT+P W++ ++ K+L + T DLVG+ K +
Sbjct: 277 VGFAEDVEIILQKLP--AKRQSMMFSATMPSWIRSLTKKYLN-NPLTIDLVGDSDQKLAD 333
Query: 123 NVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELA-GLLPGAR--ALHGD 179
+ + S RA +I +++ + GG+ I+FT+ K A LA GL + ALHGD
Sbjct: 334 GITMYSIAADSYGRASIIGPLVKEHGKGGKCIVFTQTKRDADRLAFGLAKSYKCEALHGD 393
Query: 180 IQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGR 239
I Q+QRE TL GFR G F LVAT+VAARGLD+ +V L+I E P + E ++HR+GRTGR
Sbjct: 394 ISQAQRERTLAGFRDGNFSILVATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGR 453
Query: 240 AGNTGVAVMLYDPRKSNFSK-IERESGVKFEHI 271
AG G A++++ ++ K IE+E G +F +
Sbjct: 454 AGKKGSAILIHGQDQTRAVKMIEKEVGSRFNEL 486
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/256 (40%), Positives = 151/256 (58%), Gaps = 16/256 (6%)
Query: 3 LNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLR 62
++ CLYGGAP Q ++RGVDIV+ TPGR+ D +E + + L ++ + VLDEAD ML
Sbjct: 262 ISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLD 321
Query: 63 MGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFL-KPDK----KTADLVGNEK 117
MGF + +I+ EV + QTL+++AT P V++I+ L P + +LV N
Sbjct: 322 MGFEPQIRKIVNEVP--TKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVAN-- 377
Query: 118 MKASTNVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLP---GAR 174
K+ T ++ P +R + I+R G + IIF K +LA L GA
Sbjct: 378 -KSITQTIEVLAPMEKHSRLE---QILRSQEPGSKIIIFCSTKRMCDQLARNLTRTFGAA 433
Query: 175 ALHGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRS 234
A+HGD Q++R+ L FRSG+ LVAT+VAARGLD+ D+++++ + P VE Y+HR
Sbjct: 434 AIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRI 493
Query: 235 GRTGRAGNTGVAVMLY 250
GRTGRAG TG+A +
Sbjct: 494 GRTGRAGATGLAYTFF 509
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/256 (40%), Positives = 151/256 (58%), Gaps = 16/256 (6%)
Query: 3 LNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLR 62
++ CLYGGAP Q ++RGVDIV+ TPGR+ D +E + + L ++ + VLDEAD ML
Sbjct: 330 ISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLD 389
Query: 63 MGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFL-KPDK----KTADLVGNEK 117
MGF + +I+ EV + QTL+++AT P V++I+ L P + +LV N
Sbjct: 390 MGFEPQIRKIVNEVP--TKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVAN-- 445
Query: 118 MKASTNVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLP---GAR 174
K+ T ++ P +R + I+R G + IIF K +LA L GA
Sbjct: 446 -KSITQTIEVLAPMEKHSRLE---QILRSQEPGSKIIIFCSTKRMCDQLARNLTRTFGAA 501
Query: 175 ALHGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRS 234
A+HGD Q++R+ L FRSG+ LVAT+VAARGLD+ D+++++ + P VE Y+HR
Sbjct: 502 AIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRI 561
Query: 235 GRTGRAGNTGVAVMLY 250
GRTGRAG TG+A +
Sbjct: 562 GRTGRAGATGLAYTFF 577
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 178 bits (451), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 103/273 (37%), Positives = 156/273 (57%), Gaps = 12/273 (4%)
Query: 3 LNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLR 62
+ C+YGG P Q +L++GV+IVI TPGR+ D +E N +L ++ + VLDEAD ML
Sbjct: 201 IKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLD 260
Query: 63 MGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKAST 122
MGF + +I+ + QTL +SAT P V+Q+S KFL K ++G+ +KA+
Sbjct: 261 MGFDPQIRKIVSHIRPDR--QTLYWSATWPKEVEQLSKKFLYNPYKV--IIGSSDLKANR 316
Query: 123 NVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLL----PGARALHG 178
+R IV S S + + ++ G R ++F + K+ ++ L A ++HG
Sbjct: 317 AIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHG 376
Query: 179 DIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTG 238
D Q++R+ L FRSGK + AT+VAARGLD+ DV+ +I + P +E Y+HR GRTG
Sbjct: 377 DKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTG 436
Query: 239 RAGNTGVAVMLYDPRKSNFSK----IERESGVK 267
RAG G A + + F+K I +E+G K
Sbjct: 437 RAGAKGTAYTFFTVANARFAKELTNILQEAGQK 469
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 161/272 (59%), Gaps = 12/272 (4%)
Query: 2 GLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEML 61
G+ + C+YGGAP Q +L+RGV+IVI TPGR+ D +E Q+ +L ++ + VLDEAD ML
Sbjct: 266 GVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRML 325
Query: 62 RMGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKAS 121
MGF + +I+ ++ QTLL+SAT P V+ ++ +FL+ K ++G+ +KA+
Sbjct: 326 DMGFEPQIRKIVSQIRPDR--QTLLWSATWPREVETLARQFLRDPYKA--IIGSTDLKAN 381
Query: 122 TNVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLL----PGARALH 177
++ ++ + + + +++ G + +IF E K ++ L A A+H
Sbjct: 382 QSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIH 441
Query: 178 GDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRT 237
GD QS+R+ L F+SG+ + AT+VAARGLD+ D++ ++ + P +E YIHR GRT
Sbjct: 442 GDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRT 501
Query: 238 GRAGNTGVAVMLYDPRKSNFS----KIERESG 265
GRAG G+A + + F+ KI +E+G
Sbjct: 502 GRAGAKGMAFTFFTHDNAKFARELVKILQEAG 533
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 99/251 (39%), Positives = 145/251 (57%), Gaps = 6/251 (2%)
Query: 3 LNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLR 62
++ CLYGGAP Q L+RG DIV+ TPGR+ D +E + +D ++ VLDEAD ML
Sbjct: 536 ISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLD 595
Query: 63 MGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKAST 122
MGF + +I+ E+ R QTL+++AT P V++I++ L + ++ +++ A+
Sbjct: 596 MGFEPQIRKIVNEIPP--RRQTLMYTATWPKEVRKIASDLLV-NPVQVNIGRVDELAANK 652
Query: 123 NVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELA---GLLPGARALHGD 179
+ V + + + I+R G + IIF K LA G GA +HGD
Sbjct: 653 AITQYVEVVPQMEKERRLEQILRSQERGSKVIIFCSTKRLCDHLARSVGRHFGAVVIHGD 712
Query: 180 IQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGR 239
Q +R+ L FRSGK L+AT+VAARGLDI D++++I + P VE Y+HR GRTGR
Sbjct: 713 KTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGR 772
Query: 240 AGNTGVAVMLY 250
AG TGVA +
Sbjct: 773 AGATGVAFTFF 783
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 174 bits (442), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 106/257 (41%), Positives = 148/257 (57%), Gaps = 9/257 (3%)
Query: 2 GLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEML 61
GL + C+YGG+ Q S ++ GVDIVIGTPGR++D IE L LS + F VLDEAD ML
Sbjct: 219 GLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRML 278
Query: 62 RMGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKAS 121
MGF E V IL + V Q ++FSAT P+ V +++ +F+ P+ ++G+ + A+
Sbjct: 279 DMGFEEPVRFILSNTNKVR--QMVMFSATWPLDVHKLAQEFMDPNPIKV-IIGSVDLAAN 335
Query: 122 TNVRHIVLPCSSSARAQLIPDIIRCY--SSGGRTIIFTEKKESASELAGLLP----GARA 175
+V I+ AR Q + ++ Y S R ++F K A L L A +
Sbjct: 336 HDVMQIIEVLDERARDQRLIALLEKYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAVS 395
Query: 176 LHGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSG 235
+HG+ QS+R +L F+ G LVAT+VAARGLDI DV+++I P E Y+HR G
Sbjct: 396 IHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIG 455
Query: 236 RTGRAGNTGVAVMLYDP 252
RTGRAG GVA + P
Sbjct: 456 RTGRAGKKGVAHTFFTP 472
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/256 (39%), Positives = 146/256 (57%), Gaps = 16/256 (6%)
Query: 3 LNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLR 62
++ CLYGGAP Q +L+RG DIV+ TPGR+ D +E + + L ++ + VLDEAD ML
Sbjct: 259 ISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLD 318
Query: 63 MGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFL-KPDK----KTADLVGNEK 117
MGF + +I+ E+ + QTL+++AT P V++I+ L P + +LV N
Sbjct: 319 MGFEPQIRKIVKEIP--TKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVAN-- 374
Query: 118 MKASTNVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLP---GAR 174
K+ T +V P R + I+R G + IIF K +L L GA
Sbjct: 375 -KSITQHIEVVAPMEKQRRLE---QILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAA 430
Query: 175 ALHGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRS 234
A+HGD Q +R+ L FRSG+ LVAT+VAARGLD+ D++ ++ + P VE Y+HR
Sbjct: 431 AIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRI 490
Query: 235 GRTGRAGNTGVAVMLY 250
GRTGRAG TG A +
Sbjct: 491 GRTGRAGATGQAFTFF 506
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/256 (39%), Positives = 146/256 (57%), Gaps = 16/256 (6%)
Query: 3 LNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLR 62
++ CLYGGAP Q +L+RG DIV+ TPGR+ D +E + + L ++ + VLDEAD ML
Sbjct: 259 ISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLD 318
Query: 63 MGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFL-KPDK----KTADLVGNEK 117
MGF + +I+ E+ + QTL+++AT P V++I+ L P + +LV N
Sbjct: 319 MGFEPQIRKIVKEIP--TKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVAN-- 374
Query: 118 MKASTNVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLP---GAR 174
K+ T +V P R + I+R G + IIF K +L L GA
Sbjct: 375 -KSITQHIEVVAPMEKQRRLE---QILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAA 430
Query: 175 ALHGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRS 234
A+HGD Q +R+ L FRSG+ LVAT+VAARGLD+ D++ ++ + P VE Y+HR
Sbjct: 431 AIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRI 490
Query: 235 GRTGRAGNTGVAVMLY 250
GRTGRAG TG A +
Sbjct: 491 GRTGRAGATGQAFTFF 506
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/256 (39%), Positives = 146/256 (57%), Gaps = 16/256 (6%)
Query: 3 LNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLR 62
++ CLYGGAP Q +L+RG DIV+ TPGR+ D +E + + L ++ + VLDEAD ML
Sbjct: 259 ISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLD 318
Query: 63 MGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFL-KPDK----KTADLVGNEK 117
MGF + +I+ E+ + QTL+++AT P V++I+ L P + +LV N
Sbjct: 319 MGFEPQIRKIVKEIP--TKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVAN-- 374
Query: 118 MKASTNVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLP---GAR 174
K+ T +V P R + I+R G + IIF K +L L GA
Sbjct: 375 -KSITQHIEVVAPMEKQRRLE---QILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAA 430
Query: 175 ALHGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRS 234
A+HGD Q +R+ L FRSG+ LVAT+VAARGLD+ D++ ++ + P VE Y+HR
Sbjct: 431 AIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRI 490
Query: 235 GRTGRAGNTGVAVMLY 250
GRTGRAG TG A +
Sbjct: 491 GRTGRAGATGQAFTFF 506
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/256 (39%), Positives = 146/256 (57%), Gaps = 16/256 (6%)
Query: 3 LNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLR 62
++ CLYGGAP Q +L+RG DIV+ TPGR+ D +E + + L ++ + VLDEAD ML
Sbjct: 259 ISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLD 318
Query: 63 MGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFL-KPDK----KTADLVGNEK 117
MGF + +I+ E+ + QTL+++AT P V++I+ L P + +LV N
Sbjct: 319 MGFEPQIRKIVKEIP--TKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVAN-- 374
Query: 118 MKASTNVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLP---GAR 174
K+ T +V P R + I+R G + IIF K +L L GA
Sbjct: 375 -KSITQHIEVVAPMEKQRRLE---QILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAA 430
Query: 175 ALHGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRS 234
A+HGD Q +R+ L FRSG+ LVAT+VAARGLD+ D++ ++ + P VE Y+HR
Sbjct: 431 AIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRI 490
Query: 235 GRTGRAGNTGVAVMLY 250
GRTGRAG TG A +
Sbjct: 491 GRTGRAGATGQAFTFF 506
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 149/264 (56%), Gaps = 19/264 (7%)
Query: 2 GLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEML 61
G+ YGG P + Q L+RGVDI++ TPGR+ D +ER + + +RF LDEAD ML
Sbjct: 265 GVKVVVAYGGTPINQQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRML 324
Query: 62 RMGFVEDVERILGEVDDVNR--VQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMK 119
MGF + +I+ ++D R QTLLFSAT P +++++ FL + ++
Sbjct: 325 DMGFEPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQRLAADFLA----NYIFLAVGRVG 380
Query: 120 ASTN--VRHIVLPCSSSARAQLIPDIIRCYSSGG------RTIIFTEKKESASELAGLLP 171
+ST+ V+ + S R+ L+ D++ G T++F E K A L L
Sbjct: 381 SSTDLIVQRVEFVLDSDKRSHLM-DLLHAQRENGIQGKQALTLVFVETKRGADSLENWLC 439
Query: 172 ----GARALHGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDV 227
A ++HGD Q +RE+ LK F+SG+ LVAT+VAARGLDI V ++ + P D+
Sbjct: 440 INGFPATSIHGDRTQQEREVALKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDI 499
Query: 228 EAYIHRSGRTGRAGNTGVAVMLYD 251
+ Y+HR GRTGRAG +G+A ++
Sbjct: 500 DDYVHRIGRTGRAGKSGLATAFFN 523
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 154/273 (56%), Gaps = 21/273 (7%)
Query: 2 GLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEML 61
G+ YGG P + Q L+RGVDI++ TPGR+ D +ER + L +RF LDEAD ML
Sbjct: 252 GVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADRML 311
Query: 62 RMGFVEDVERILGEVD--DVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMK 119
MGF + +I+ ++D QT+LFSAT P ++++++ FL + ++
Sbjct: 312 DMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLS----NYIFLAVGRVG 367
Query: 120 ASTN--VRHIVLPCSSSARAQLIPDIIRCYSSGGR------TIIFTEKKESASELAGLL- 170
+ST+ V+ + S R+ L+ D++ G T++F E K+ A L L
Sbjct: 368 SSTDLIVQRVEFVHDSDKRSHLM-DLLHAQRENGNQGKQALTLVFVETKKGADSLENWLC 426
Query: 171 ----PGARALHGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRD 226
P A +HGD Q +RE+ L+ F++G+ LVAT+VAARGLDI V ++ + P D
Sbjct: 427 INGFP-ATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPND 485
Query: 227 VEAYIHRSGRTGRAGNTGVAVMLYDPRKSNFSK 259
++ Y+HR GRTGRAGN+G+A ++ + +K
Sbjct: 486 IDDYVHRIGRTGRAGNSGLATAFFNDNNTTMAK 518
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 150/270 (55%), Gaps = 17/270 (6%)
Query: 2 GLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEML 61
G+ YGG P H Q L+RG DI++ TPGR+ D +ER + + +RF LDEAD ML
Sbjct: 257 GVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRML 316
Query: 62 RMGFVEDVERILGEVDDVNR--VQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMK 119
MGF + +I+ ++D R QT+LFSAT P +++++ F+ + ++
Sbjct: 317 DMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMS----NYIFLAVGRVG 372
Query: 120 ASTNV--RHIVLPCSSSARAQLIPDIIRCY----SSGGRTIIFTEKKESASELAGLLP-- 171
+ST++ + + S R+ L+ D++ T++F E K A L L
Sbjct: 373 SSTDLITQRVEFVQESDKRSHLM-DLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMN 431
Query: 172 --GARALHGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEA 229
A ++HGD Q +RE+ L+ F++G+ LVAT+VAARGLDI V ++ + P D++
Sbjct: 432 EFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDD 491
Query: 230 YIHRSGRTGRAGNTGVAVMLYDPRKSNFSK 259
Y+HR GRTGRAG +G+A ++ + ++
Sbjct: 492 YVHRIGRTGRAGKSGIATAFFNENNAQLAR 521
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 150/270 (55%), Gaps = 17/270 (6%)
Query: 2 GLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEML 61
G+ YGG P H Q L+RG DI++ TPGR+ D +ER + + +RF LDEAD ML
Sbjct: 257 GVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRML 316
Query: 62 RMGFVEDVERILGEVDDVNR--VQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMK 119
MGF + +I+ ++D R QT+LFSAT P +++++ F+ + ++
Sbjct: 317 DMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMS----NYIFLAVGRVG 372
Query: 120 ASTNV--RHIVLPCSSSARAQLIPDIIRCY----SSGGRTIIFTEKKESASELAGLLP-- 171
+ST++ + + S R+ L+ D++ T++F E K A L L
Sbjct: 373 SSTDLITQRVEFVQESDKRSHLM-DLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMN 431
Query: 172 --GARALHGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEA 229
A ++HGD Q +RE+ L+ F++G+ LVAT+VAARGLDI V ++ + P D++
Sbjct: 432 EFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDD 491
Query: 230 YIHRSGRTGRAGNTGVAVMLYDPRKSNFSK 259
Y+HR GRTGRAG +G+A ++ + ++
Sbjct: 492 YVHRIGRTGRAGKSGIATAFFNENNAQLAR 521
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 150/270 (55%), Gaps = 17/270 (6%)
Query: 2 GLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEML 61
G+ YGG P H Q L+RG DI++ TPGR+ D +ER + + +RF LDEAD ML
Sbjct: 257 GVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRML 316
Query: 62 RMGFVEDVERILGEVDDVNR--VQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMK 119
MGF + +I+ ++D R QT+LFSAT P +++++ F+ + ++
Sbjct: 317 DMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMS----NYIFLAVGRVG 372
Query: 120 ASTNV--RHIVLPCSSSARAQLIPDIIRCY----SSGGRTIIFTEKKESASELAGLLP-- 171
+ST++ + + S R+ L+ D++ T++F E K A L L
Sbjct: 373 SSTDLITQRVEFVQESDKRSHLM-DLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMN 431
Query: 172 --GARALHGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEA 229
A ++HGD Q +RE+ L+ F++G+ LVAT+VAARGLDI V ++ + P D++
Sbjct: 432 EFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDD 491
Query: 230 YIHRSGRTGRAGNTGVAVMLYDPRKSNFSK 259
Y+HR GRTGRAG +G+A ++ + ++
Sbjct: 492 YVHRIGRTGRAGKSGIATAFFNENNAQLAR 521
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/268 (36%), Positives = 147/268 (54%), Gaps = 21/268 (7%)
Query: 2 GLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEML 61
GL +YGG H Q LK G +IV+ TPGR+ D ++ + L + + + VLDEAD M
Sbjct: 329 GLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMF 388
Query: 62 RMGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLK-PDKKTADLVG--NEKM 118
+GF V I+G++ QTLLFSAT+P V++++ + L P + T VG NE +
Sbjct: 389 DLGFEPQVRSIVGQIRPDR--QTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDI 446
Query: 119 KASTNVRHIVLPCSSSARAQLI---PDIIRCYSSGGRTIIFTEKKESASELAGLLP---- 171
NV +P + L+ P +I G ++F KK + E+ L
Sbjct: 447 TQVVNV----IPSDAEKLPWLLEKLPGMI----DEGDVLVFASKKATVDEIEAQLTLNSF 498
Query: 172 GARALHGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYI 231
ALHGD Q+ R TL+ F+SG L+AT+VAARGLDI ++ ++ + +D++ ++
Sbjct: 499 KVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHV 558
Query: 232 HRSGRTGRAGN-TGVAVMLYDPRKSNFS 258
HR GRTGRAG+ GVA L R++ F+
Sbjct: 559 HRIGRTGRAGDRDGVAYTLVTQREARFA 586
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 137/260 (52%), Gaps = 15/260 (5%)
Query: 3 LNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLR 62
L + GG SQ +KRGV IV+ TPGR+KD + ++ + L R+ LDEAD ++
Sbjct: 257 LRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVD 316
Query: 63 MGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQIS-TKFLKPDKKTADLVGNEKMKAS 121
+GF +D+ + ++ QTLLFSAT+P ++ + + +KP G +
Sbjct: 317 LGFEDDIREVFDHFK--SQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAGAANLDVI 374
Query: 122 TNVRHIVLPCSSSARAQLIPDIIRCYS-SGGRTIIFTEKKESASELAG--LLPG--ARAL 176
V ++ A+++ ++ C + +IF E K ++ LL G A A+
Sbjct: 375 QEVEYV------KQEAKIV-YLLECLQKTSPPVLIFCENKADVDDIHEYLLLKGVEAVAI 427
Query: 177 HGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGR 236
HG Q RE + F++GK LVAT+VA++GLD D+Q +I + P ++E Y+HR GR
Sbjct: 428 HGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGR 487
Query: 237 TGRAGNTGVAVMLYDPRKSN 256
TGR G TG+A + +S
Sbjct: 488 TGRCGKTGIATTFINKNQSE 507
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 151/292 (51%), Gaps = 15/292 (5%)
Query: 1 MGLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLR---FRVLDEA 57
+G+ +YGG+ Q S LKRG +IV+ TPGR+ D + + ++ LR F V+DEA
Sbjct: 291 LGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEA 350
Query: 58 DEMLRMGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEK 117
D M MGF + RI+ + QT+LFSAT P V+ ++ K L +K VG
Sbjct: 351 DRMFDMGFEPQITRIIQNIRP--ERQTVLFSATFPRQVETLARKVL--NKPVEIQVGGRS 406
Query: 118 MKASTNVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLPGAR--- 174
+ + ++ +V S R + +++ +S G+ ++F + +E L + +
Sbjct: 407 V-VNKDITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPC 465
Query: 175 -ALHGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHR 233
+LHG Q+ RE T+ F++ L+AT+VAARGLD+ +++L++ + P E Y+HR
Sbjct: 466 LSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHR 525
Query: 234 SGRTGRAGNTGVAVMLYDPRKSNFSKIERESGVKFEHISAPQPDDIAKAVGG 285
GRTGRAG G AV + ++ ++ E P PDD+ G
Sbjct: 526 VGRTGRAGRKGCAVTFISEDDAKYAPDLVKA---LELSEQPVPDDLKALADG 574
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 140/277 (50%), Gaps = 45/277 (16%)
Query: 1 MGLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEM 60
+G + GG Q + +G +IVI TPGR+ D +ER+ L++ + VLDEAD M
Sbjct: 416 LGFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRM 475
Query: 61 LRMGFVEDVERILGEVDDVN---------------RVQTLLFSATLPVWVKQISTKFLK- 104
+ MGF V +L + N T +FSAT+P V++++ K+L+
Sbjct: 476 IDMGFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVERLARKYLRN 535
Query: 105 -------PDKKTADLVGNEKMKASTNVRHIVLPCSSSA--RAQLIPDIIRCYSSGGRT-I 154
KT DL+ +H+++ S R Q + D + G +T I
Sbjct: 536 PVVVTIGTAGKTTDLIS----------QHVIMMKESEKFFRLQKLLDEL-----GEKTAI 580
Query: 155 IFTEKKESASELAGLLPGA----RALHGDIQQSQREITLKGFRSGKFMTLVATNVAARGL 210
+F K++ +A L A LHG Q QREI+L+GFR+ ++ LVAT+V RG+
Sbjct: 581 VFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGI 640
Query: 211 DINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAV 247
DI DV +I + P+ +E Y HR GRTGRAG +GVA
Sbjct: 641 DIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVAT 677
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 139/265 (52%), Gaps = 15/265 (5%)
Query: 3 LNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLR 62
L + GG SQ +K+GV IV+ TPGR+KD + ++ + L R LDEAD ++
Sbjct: 208 LRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVD 267
Query: 63 MGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFL-KPDKKTADLVGNEKMKAS 121
+GF +D+ + ++ QTLLFSAT+P ++ +T L KP G +
Sbjct: 268 LGFEDDIRHVFDHFK--SQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVI 325
Query: 122 TNVRHIVLPCSSSARAQLIPDIIRCYS-SGGRTIIFTEKKESASELAG--LLPG--ARAL 176
V ++ A+++ ++ C + +IF E K ++ LL G A A+
Sbjct: 326 QEVEYV------KQEAKIV-YLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAI 378
Query: 177 HGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGR 236
HG Q R+ + F++GK LVAT+VA++GLD D+Q +I + P ++E Y+HR GR
Sbjct: 379 HGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGR 438
Query: 237 TGRAGNTGVAVMLYDPRKSNFSKIE 261
TGR G TG+A + +S + ++
Sbjct: 439 TGRCGKTGIATTFINKNQSEITLLD 463
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 126/213 (59%), Gaps = 8/213 (3%)
Query: 2 GLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEML 61
G+ + C+YGGAP Q +L+RGV+IVI TPGR+ D +E Q+ +L ++ + VLDEAD ML
Sbjct: 266 GVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRML 325
Query: 62 RMGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKAS 121
MGF + +I+ ++ QTLL+SAT P V+ ++ +FL+ K ++G+ +KA+
Sbjct: 326 DMGFEPQIRKIVSQIRPDR--QTLLWSATWPREVETLARQFLRDPYKA--IIGSTDLKAN 381
Query: 122 TNVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLL----PGARALH 177
++ ++ + + + +++ G + +IF E K ++ L A A+H
Sbjct: 382 QSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIH 441
Query: 178 GDIQQSQREITLKGFRSGKFMTLVATNVAARGL 210
GD QS+R+ L F+SG+ + AT+VAARGL
Sbjct: 442 GDKTQSERDRVLAEFKSGRSPIMTATDVAARGL 474
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 139/256 (54%), Gaps = 12/256 (4%)
Query: 1 MGLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLR---FRVLDEA 57
+G+ +YGG+ Q S LKRG +IV+ TPGR+ D + + ++ LR F V+DEA
Sbjct: 629 LGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEA 688
Query: 58 DEMLRMGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEK 117
D M MGF + RI+ + QT+LFSAT P V+ ++ K L +K VG
Sbjct: 689 DRMFDMGFEPQITRIIQNI--RPERQTVLFSATFPRQVETLARKVL--NKPVEIQVGGRS 744
Query: 118 MKASTNVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLPGAR--- 174
+ + ++ +V S R + +++ +S G+ ++F + +E L + +
Sbjct: 745 V-VNKDITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPC 803
Query: 175 -ALHGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHR 233
+LHG Q+ RE T+ F++ L+AT+VAARGLD+ +++L++ + P E Y+HR
Sbjct: 804 LSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHR 863
Query: 234 SGRTGRAGNTGVAVML 249
GRTGRAG G AV
Sbjct: 864 VGRTGRAGRKGCAVTF 879
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/275 (36%), Positives = 149/275 (54%), Gaps = 11/275 (4%)
Query: 8 LYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQ-NLDLSKLRFRVLDEADEMLRMGFV 66
+ GG QE L+ DIV+ TPGR+ DH+ ++DL L +LDEAD +L+ GF
Sbjct: 272 IVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFA 331
Query: 67 EDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFL-KPDKKTADLVGNEKMKASTNVR 125
++ ++ R QT+LFSAT+ VK++ L KP + +AD + V
Sbjct: 332 TEITELVRLCP--KRRQTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVV 389
Query: 126 HIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGL--LPGARA--LHGDIQ 181
I ++ A L+ R + S + IIF+ K++A L L L G +A LHG++
Sbjct: 390 RIRRTREANQEAVLLSLCTRTFKS--KVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLT 447
Query: 182 QSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAG 241
Q+QR +L+ FR + L+AT+VAARGLDI VQ +I PR++++Y+HR GRT RAG
Sbjct: 448 QAQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAG 507
Query: 242 NTGVAV-MLYDPRKSNFSKIERESGVKFEHISAPQ 275
G AV + D +S I ++ G K + P+
Sbjct: 508 REGYAVTFVTDSDRSLLKVIAKKVGSKLKSRVIPE 542
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 124/241 (51%), Gaps = 12/241 (4%)
Query: 27 IVIGTPGRIKDHIERQ---NLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQ 83
I++ TPGR+KDHIE L ++ VLDEAD +L MGF +D+ERI+ V Q
Sbjct: 451 ILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHLLDMGFRKDIERIISAVP--KERQ 508
Query: 84 TLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVRHIVLPCSSSARAQLIPDI 143
T LFSAT+P V+QI L+ D + + V ++ VR + + S L+ +
Sbjct: 509 TFLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQQVRQMHMIASLDRHFSLLYTL 568
Query: 144 IRCYSSGG---RTIIFTEKKESASELAGLLP----GARALHGDIQQSQREITLKGFRSGK 196
+R + G + I+F +A LL R +H QS R FR K
Sbjct: 569 LREHIMGNVDYKVIVFCTTAMVTKLVADLLGELNLNVREIHSRKPQSYRTRVSNEFRKSK 628
Query: 197 FMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKSN 256
+ LV ++V+ARG+D DV L++Q P+D E YIHR GRTGR G G ++L P +
Sbjct: 629 GLILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIHRLGRTGRKGKEGEGILLLAPWEEY 688
Query: 257 F 257
F
Sbjct: 689 F 689
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 131/251 (52%), Gaps = 9/251 (3%)
Query: 1 MGLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEM 60
+G+ A GG + L+ GV +V+GTPGR+ D + RQ+L ++ VLDEADEM
Sbjct: 136 LGVKAQACVGGTSVREDQRVLQSGVHVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEM 195
Query: 61 LRMGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKA 120
L GF + + I + ++VQ +FSAT+P +I+ KF+ +K LV +++
Sbjct: 196 LSRGFKDQIYDIFQLLP--SKVQVGVFSATMPPEALEITRKFM--NKPVRILVKRDELTL 251
Query: 121 STNVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLPG----ARAL 176
+ V + + + D+ + +++IF + L + A
Sbjct: 252 EGIKQFYVNVDKEEWKLETLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRSRDHTVSAT 310
Query: 177 HGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGR 236
HGD+ Q+ R+I ++ FRSG L+ T++ ARG+D+ V L+I + P E Y+HR GR
Sbjct: 311 HGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGR 370
Query: 237 TGRAGNTGVAV 247
+GR G GVA+
Sbjct: 371 SGRFGRKGVAI 381
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 144/292 (49%), Gaps = 17/292 (5%)
Query: 2 GLNACCLYGGAPYHSQESNLK-RGVDIVIGTPGRIKDHIERQN---LDLSKLRFRVLDEA 57
G+ L GG + + L+ I+I TPGR+ DHIE ++ L L+ ++DEA
Sbjct: 434 GIGVQTLIGGTRFKLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEA 493
Query: 58 DEMLRMGFVEDVERILGEVDDVNRV-QTLLFSATLPVWVKQISTKFLKPDKKTADLVGNE 116
D +L +GF DVE+I +D + R Q+LLFSAT+P V+++S LK D D +G
Sbjct: 494 DLLLDLGFRRDVEKI---IDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLG 550
Query: 117 KMKASTNVRHIVLPCSSSARAQLIPDIIRCY---SSGGRTIIFTEKKESASELAGLLP-- 171
++ VR + + L+P +++ + + + I+F S + LL
Sbjct: 551 CVETHDKVRQSCIVAPHESHFHLVPHLLKEHINNTPDYKIIVFCSTGMVTSLMYTLLREM 610
Query: 172 --GARALHGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEA 229
R +H Q R F+ + LV ++V+ARG++ DV L+IQ P D E
Sbjct: 611 KLNVREIHARKPQLHRTRVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQ 670
Query: 230 YIHRSGRTGRAGNTGVAVMLYDPRKSNFSKIERESGVKFEHISAPQPDDIAK 281
YIHR GRTGR G G ++L P + F ++ + E I AP D I K
Sbjct: 671 YIHRLGRTGREGKGGEGLLLIAPWERYF--LDELKDLPLEPIPAPDLDSIVK 720
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 135/267 (50%), Gaps = 18/267 (6%)
Query: 1 MGLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEM 60
+G+ GG + L+ GV +V+GTPGR+ D ++RQ+L ++ VLDEADEM
Sbjct: 129 LGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEM 188
Query: 61 LRMGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKA 120
L GF + + I + ++Q +FSAT+P +I+ KF+ K LV +++
Sbjct: 189 LSRGFKDQIYDIFQLLP--PKIQVGVFSATMPPEALEITRKFMS--KPVRILVKRDELTL 244
Query: 121 STNVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLPG----ARAL 176
+ V + + + D+ + +++IF + L + A
Sbjct: 245 EGIKQFYVNVEKEEWKLETLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRSRDHTVSAT 303
Query: 177 HGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGR 236
HGD+ Q+ R+I ++ FRSG L+ T++ ARG+D+ V L+I + P E Y+HR GR
Sbjct: 304 HGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGR 363
Query: 237 TGRAGNTGVAV---------MLYDPRK 254
+GR G GVA+ ML+D +K
Sbjct: 364 SGRFGRKGVAINFVTRDDERMLFDIQK 390
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 135/267 (50%), Gaps = 18/267 (6%)
Query: 1 MGLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEM 60
+G+ GG + L+ GV +V+GTPGR+ D ++RQ+L ++ VLDEADEM
Sbjct: 134 LGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEM 193
Query: 61 LRMGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKA 120
L GF + + I + ++Q +FSAT+P +I+ KF+ K LV +++
Sbjct: 194 LSRGFKDQIYDIFQLLP--PKIQVGVFSATMPPEALEITRKFMS--KPVRILVKRDELTL 249
Query: 121 STNVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLPG----ARAL 176
+ V + + + D+ + +++IF + L + A
Sbjct: 250 EGIKQFYVNVEKEEWKLETLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRSRDHTVSAT 308
Query: 177 HGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGR 236
HGD+ Q+ R+I ++ FRSG L+ T++ ARG+D+ V L+I + P E Y+HR GR
Sbjct: 309 HGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGR 368
Query: 237 TGRAGNTGVAV---------MLYDPRK 254
+GR G GVA+ ML+D +K
Sbjct: 369 SGRFGRKGVAINFVTRDDERMLFDIQK 395
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 135/267 (50%), Gaps = 18/267 (6%)
Query: 1 MGLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEM 60
+G+ GG + L+ GV +V+GTPGR+ D ++RQ+L ++ VLDEADEM
Sbjct: 124 LGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEM 183
Query: 61 LRMGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKA 120
L GF + + I + ++Q +FSAT+P +I+ KF+ K LV +++
Sbjct: 184 LSRGFKDQIYDIFQLLPP--KIQVGVFSATMPPEALEITRKFMS--KPVRILVKRDELTL 239
Query: 121 STNVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLPG----ARAL 176
+ V + + + D+ + +++IF + L + A
Sbjct: 240 EGIKQFYVNVEKEEWKLETLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRSRDHTVSAT 298
Query: 177 HGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGR 236
HGD+ Q+ R+I ++ FRSG L+ T++ ARG+D+ V L+I + P E Y+HR GR
Sbjct: 299 HGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGR 358
Query: 237 TGRAGNTGVAV---------MLYDPRK 254
+GR G GVA+ ML+D +K
Sbjct: 359 SGRFGRKGVAINFVTRDDERMLFDIQK 385
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 136/282 (48%), Gaps = 26/282 (9%)
Query: 4 NACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRM 63
+AC GG L+RGV V GTPGR+ D I+R +L ++ VLDE+DEML
Sbjct: 122 HACI--GGKSIGEDIKKLERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSK 179
Query: 64 GF---VEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFL--------KPDKKTADL 112
G + DV R L + +Q L SATLP + +++ KF+ KPD+ T +
Sbjct: 180 GLKDQIYDVYRALP-----HDIQVCLISATLPQEILEMTEKFMTDPVRILVKPDELTLEG 234
Query: 113 VGNEKMKASTNVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLPG 172
+ + C R + II C ++ + TEK S++ +
Sbjct: 235 IKQYYVDVDKEEWKFDTLCDLYGRLTINQAIIFC-NTRQKVDWLTEKMRSSNFIVS---- 289
Query: 173 ARALHGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIH 232
++HGD +Q +R+ + FRS K L+A++V ARG+D+ V +I + P + E YIH
Sbjct: 290 --SMHGDKRQKERDDIMNQFRSFKSRVLIASDVWARGIDVQTVSHVINYDIPNNPELYIH 347
Query: 233 RSGRTGRAGNTGVAV-MLYDPRKSNFSKIERESGVKFEHISA 273
R GR GR G GVA+ + + IER G K + A
Sbjct: 348 RIGRAGRFGREGVAINFVKSSDMKDLKDIERHYGTKIREMPA 389
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 123/241 (51%), Gaps = 12/241 (4%)
Query: 27 IVIGTPGRIKDHIERQNLDLSKL---RFRVLDEADEMLRMGFVEDVERILGEVDDVNRVQ 83
I++ TPGR+KDHIE + ++L + VLDEAD +L MGF D+ERI+ V + Q
Sbjct: 513 ILVATPGRLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVP--KQRQ 570
Query: 84 TLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVRHIVLPCSSSARAQLIPDI 143
T LFSAT+P V+QI LK D + + V + V + + S L+ +
Sbjct: 571 TFLFSATVPEEVRQICHVALKRDHEFINCVQEGSGETHQKVTQMYMIASLDRHFSLLHVL 630
Query: 144 IRCYSSGG---RTIIFTEKKESASELAGLLP----GARALHGDIQQSQREITLKGFRSGK 196
++ + + + IIF +A LL R +H QS R FR K
Sbjct: 631 LKEHIADNVDYKVIIFCTTAMVTRLVADLLSQLSLNVREIHSRKPQSYRTRVSDEFRKSK 690
Query: 197 FMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKSN 256
+ LV ++V+ARG+D DV L++Q P D E YIHR GRTGR G G V+L P +
Sbjct: 691 AIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVLLLAPWEEY 750
Query: 257 F 257
F
Sbjct: 751 F 751
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 130/259 (50%), Gaps = 13/259 (5%)
Query: 10 GGAPYHSQESNLKRG-VDIVIGTPGRIKDHIERQN---LDLSKLRFRVLDEADEMLRMGF 65
GG +++ L++ I++ TPGR+KDHI+ + L ++ VLDEAD +L MGF
Sbjct: 193 GGTKLPTEQRRLQKSPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLDMGF 252
Query: 66 VEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVR 125
++ERI+ V + QT LFSAT+ V+QI LK D + + V + V
Sbjct: 253 RREIERIIAAVP--KQRQTFLFSATVSDEVRQICHVALKRDHEFVNCVQEGAGETHQKVS 310
Query: 126 HIVLPCSSSARAQLIPDIIRCYSS---GGRTIIFTEKKESASELAGLLP----GARALHG 178
+ + S L+ +++ + + G + IIF +A LL R +H
Sbjct: 311 QMYMIASLDRHFSLLYGLLKKHITDNVGYKVIIFCTTAMVTRLVADLLGKLSLNVREIHS 370
Query: 179 DIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTG 238
QS R FR K + LV ++V+ARG+D DV L++Q P D E YIHR GRTG
Sbjct: 371 RKPQSYRTRVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTG 430
Query: 239 RAGNTGVAVMLYDPRKSNF 257
R G G V+L P + F
Sbjct: 431 RKGKEGEGVLLLAPWEEYF 449
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 129/251 (51%), Gaps = 9/251 (3%)
Query: 1 MGLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEM 60
+G+ GG + L+ GV +V+GTPGR+ D ++RQ+L ++ VLDEADEM
Sbjct: 134 LGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEM 193
Query: 61 LRMGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKA 120
L GF + + I + ++Q +FSAT+P +I+ KF+ K LV +++
Sbjct: 194 LSRGFKDQIYDIFQLLP--PKIQVGVFSATMPPEALEITRKFMS--KPVRILVKRDELTL 249
Query: 121 STNVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLPG----ARAL 176
+ V + + + D+ + +++IF + L + A
Sbjct: 250 EGIKQFYVNVEKEEWKLETLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRSRDHTVSAT 308
Query: 177 HGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGR 236
HGD+ Q+ R+I ++ FRSG L+ T++ ARG+D+ V L+I + P E Y+HR GR
Sbjct: 309 HGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGR 368
Query: 237 TGRAGNTGVAV 247
+GR G GVA+
Sbjct: 369 SGRFGRKGVAI 379
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 143/292 (48%), Gaps = 17/292 (5%)
Query: 2 GLNACCLYGGAPYHSQESNLK-RGVDIVIGTPGRIKDHIERQN---LDLSKLRFRVLDEA 57
G+ L GG + + L+ I+I TPGR+ DHIE ++ L L+ ++DEA
Sbjct: 481 GIGVQTLIGGTRFRLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEA 540
Query: 58 DEMLRMGFVEDVERILGEVDDVNRV-QTLLFSATLPVWVKQISTKFLKPDKKTADLVGNE 116
D +L +GF DVE+I +D + R Q+LLFSAT+P V+++S LK D D +G
Sbjct: 541 DLLLDLGFKRDVEKI---IDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLG 597
Query: 117 KMKASTNVRHIVLPCSSSARAQLIPDIIRCYSSG---GRTIIFTEKKESASELAGLLP-- 171
++ V+ + + L+P +++ + + + I+F S + LL
Sbjct: 598 CVETHDKVKQSCIVAPHESHFHLVPHLLKEHINNMPDYKIIVFCSTGMVTSLMYTLLREM 657
Query: 172 --GARALHGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEA 229
R +H Q R F+ + LV ++V+ARG++ DV L+IQ P D E
Sbjct: 658 KLNVREIHARKPQLHRTCVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQ 717
Query: 230 YIHRSGRTGRAGNTGVAVMLYDPRKSNFSKIERESGVKFEHISAPQPDDIAK 281
YIHR GRTGR G G ++L P + F ++ + E I AP D K
Sbjct: 718 YIHRLGRTGREGKGGKGLLLIAPWERYF--LDELKDLPLEPIPAPDLDSRVK 767
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 135/265 (50%), Gaps = 20/265 (7%)
Query: 3 LNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLR 62
++AC GG + L+ GV +V+GTPGR+ D + RQ+L ++ VLDEADEML
Sbjct: 133 VHACV--GGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLS 190
Query: 63 MGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKAST 122
GF + + I + ++Q +FSAT+P +I+ KF+ K LV +++
Sbjct: 191 RGFKDQIYDIFQLLP--PKIQVGVFSATMPPEALEITRKFMS--KPVRILVKRDELTLEG 246
Query: 123 NVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLPG----ARALHG 178
+ V + + + D+ + +++IF + L + A HG
Sbjct: 247 IKQFYVNVEKEDWKLETLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRSRDHTVSATHG 305
Query: 179 DIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTG 238
D+ Q+ R+I ++ FRSG L+ T++ ARG+D+ V L+I + P E Y+HR GR+G
Sbjct: 306 DMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSG 365
Query: 239 RAGNTGVAV---------MLYDPRK 254
R G GVA+ ML+D +K
Sbjct: 366 RFGRKGVAINFVTLDDQRMLFDIQK 390
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 135/265 (50%), Gaps = 20/265 (7%)
Query: 3 LNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLR 62
++AC GG + L+ GV +V+GTPGR+ D + RQ+L ++ VLDEADEML
Sbjct: 138 VHACV--GGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLS 195
Query: 63 MGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKAST 122
GF + + I + ++Q +FSAT+P +I+ KF+ K LV +++
Sbjct: 196 RGFKDQIYDIFQLLP--PKIQVGVFSATMPPEALEITRKFMS--KPVRILVKRDELTLEG 251
Query: 123 NVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLPG----ARALHG 178
+ V + + + D+ + +++IF + L + A HG
Sbjct: 252 IKQFYVNVEKEDWKLETLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRSRDHTVSATHG 310
Query: 179 DIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTG 238
D+ Q+ R+I ++ FRSG L+ T++ ARG+D+ V L+I + P E Y+HR GR+G
Sbjct: 311 DMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSG 370
Query: 239 RAGNTGVAV---------MLYDPRK 254
R G GVA+ ML+D +K
Sbjct: 371 RFGRKGVAINFVTLDDQRMLFDIQK 395
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 141/288 (48%), Gaps = 24/288 (8%)
Query: 4 NACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRM 63
+AC GG L+ GV +V GTPGR+ D I+R++L ++ +LDE+DEML
Sbjct: 135 HACI--GGNSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSR 192
Query: 64 GF---VEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKA 120
GF + DV R L +Q L SATLP + ++++KF+ K LV +++
Sbjct: 193 GFKDQIYDVYRYLPP-----DLQVCLVSATLPHEILEMTSKFMTEPVKI--LVKRDELTL 245
Query: 121 STNVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLPG----ARAL 176
+ V + + D+ + + +IF K L+ + ++
Sbjct: 246 EGIKQFFVAVEKEEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDYLSEKMRSHNFTVSSM 304
Query: 177 HGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGR 236
HGD+ Q +R+ + FRSG L+ T+V ARG+D+ V L+I + P + E YIHR GR
Sbjct: 305 HGDMPQKERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGR 364
Query: 237 TGRAGNTGVAVMLYDPRKSNFSKIERESGVKFEHISAPQPDDIAKAVG 284
+GR G GVA+ KS+ KI R+ E + Q D++ V
Sbjct: 365 SGRFGRKGVAINFV---KSDDIKILRD----IEQYYSTQIDEMPMNVA 405
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 131/258 (50%), Gaps = 15/258 (5%)
Query: 3 LNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHI-ERQNLDLSKLRFRVLDEADEML 61
L L GG Q L +G D++I TPGR+ + E ++ L + + V DEAD +
Sbjct: 127 LRVSLLVGGDSMEDQFEELTKGPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLF 186
Query: 62 RMGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKAS 121
MGF E + +IL ++ + NR QTLLFSATLP + + + L+ + V N K S
Sbjct: 187 GMGFAEQLHQILTQLSE-NR-QTLLFSATLPSALAEFAKAGLREPQLVRLDVEN---KIS 241
Query: 122 TNVRHIVLPCSSSARAQLIPDIIRCY-SSGGRTIIFTEKKE------SASELAGLLPGAR 174
+++ L + + ++R + SS +T+IF K S +L + P
Sbjct: 242 PDLKLSFLTVRPEEKYSALLYLVREHISSDQQTLIFVSTKHHVEFVNSLFKLENIEPSV- 300
Query: 175 ALHGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRS 234
+GD+ Q R+I + FR+ K M L+ T++AARG+DI + +I + P + ++HR
Sbjct: 301 -CYGDMDQDARKIHVSRFRARKTMLLIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRV 359
Query: 235 GRTGRAGNTGVAVMLYDP 252
GR RAG TG A P
Sbjct: 360 GRAARAGRTGCAYSFVTP 377
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 141/294 (47%), Gaps = 38/294 (12%)
Query: 1 MGLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLR---FRVLDEA 57
+G+ +YGG+ Q S LKRG +IV+ TPGR+ D + + ++ LR + V+DEA
Sbjct: 496 LGIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEA 555
Query: 58 DEMLRMGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEK 117
D M MGF + RI+ + QT+LFSAT P V+ ++ K L +K VG
Sbjct: 556 DRMFDMGFEPQITRIVQNIRPDR--QTVLFSATFPRQVETLARKVL--NKPVEIQVGGRS 611
Query: 118 MKASTNVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLPGARALH 177
+ + ++ +V S R + +++ + G+ ++F +E
Sbjct: 612 V-VNKDITQLVEIRPESERFSRLLELLGEWYEKGKVLVFVRSQEK--------------- 655
Query: 178 GDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRT 237
++ F+S L+AT+VAARGLD+ +++L++ + P E Y+HR GRT
Sbjct: 656 ----------SISDFKSDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRT 705
Query: 238 GRAGNTGVAVMLYDPRKSNFSKIERESGVK-FEHISAPQPDDIAKAVGGEAAEL 290
GRAG G AV + ++ VK E P PDD+ G A++
Sbjct: 706 GRAGRKGCAVTFISEDDAKYAP----DLVKALELSEQPVPDDVKAVAEGFMAKV 755
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 139/289 (48%), Gaps = 25/289 (8%)
Query: 2 GLNACCLYGGAPYHSQESNLKR-GVDIVIGTPGRIKDHIERQN-LDLSKLRFRVLDEADE 59
+N+ L GG + ++ G +++IGTPGR+ D +ER LD L +LDEAD
Sbjct: 119 NVNSVLLVGGREVKADMKIIEEEGCNVLIGTPGRLSDIMERMEILDFRNLEILILDEADR 178
Query: 60 MLRMGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFL----------KPDKKT 109
+L MGF V I+ + R T LFSAT V++++ L K ++
Sbjct: 179 LLEMGFQRQVNYIISRLPKQRR--TGLFSATQTEGVEELAKAGLRNPVRVEVRAKSKSES 236
Query: 110 ADLVGNEKMKASTNVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGL 169
+ + N K + ++ + + C + ++ + D++ +S + I+F S +
Sbjct: 237 SQQLTNSKTPSGLHLEY--MECEADKKSSQLVDLL-IKNSDKKLIVFFMTCASVDYWGLV 293
Query: 170 LPGARAL--------HGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQC 221
L AL HGD++Q+ R+ L F L+ T+VAARGLDI + ++Q
Sbjct: 294 LSKIPALKSISLIPIHGDMKQNARDKALASFTKASSGALLCTDVAARGLDIPGIDYVVQY 353
Query: 222 EPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKSNFSKIERESGVKFEH 270
+PP+D + HR+GRT R G G A++ P++ + + R V E
Sbjct: 354 DPPQDPNMFNHRAGRTARLGRQGRAIVFLLPKEEAYVEFMRIRRVPLEE 402
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 123/233 (52%), Gaps = 8/233 (3%)
Query: 22 KRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNR 81
K D++I TP R+K I+ + +DLSK+ + VLDE+D++ ++ ++ ++ + +
Sbjct: 256 KLWCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLFEQSLLKQIDCVVKACSNPSI 315
Query: 82 VQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVRHIVLPCSSSARAQLIP 141
+++L FSATLP V++++ + + ++G + + T + +V S + +
Sbjct: 316 IRSL-FSATLPDSVEELARSIMHDAVRV--IIGRKNTASETVKQKLVFAGSEEGKLLALR 372
Query: 142 DIIRCYSSGGRTIIFTEKKESASELAGLLPG----ARALHGDIQQSQREITLKGFRSGKF 197
S +IF + KE A EL L A +H D+ +RE + FR+G+
Sbjct: 373 QSF-AESLNPPVLIFVQSKERAKELYDELKCENIRAGVIHSDLPPGERENAVDQFRAGEK 431
Query: 198 MTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLY 250
L+AT+V ARG+D + +I + P AYIHR GR+GRAG +G A+ Y
Sbjct: 432 WVLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFY 484
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 123/269 (45%), Gaps = 26/269 (9%)
Query: 1 MGLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEM 60
+G A + G Q L +G +IVI TPGR+ D +ER+ + L++ + VLDEAD M
Sbjct: 305 LGFKAVSITGWESIEKQALKLSQGCEIVIATPGRLLDCLERRYVVLNQCNYLVLDEADRM 364
Query: 61 LRMGFVEDVERILGEVDDVNRVQ---------------TLLFSATLPVWVKQISTKFLKP 105
+ M F V +L + N T +FSAT+ + V++++ KFL+
Sbjct: 365 IDMDFEPQVSEVLDVMPCSNLKPEKEDEELEEKKIYRTTYMFSATMLLSVERLARKFLR- 423
Query: 106 DKKTADLVGNEKMKASTNVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASE 165
+G + + + V+ S + + +I I+F +
Sbjct: 424 -NPVVVTIG----ETTKFITQQVIMTKESDKFSRLKKLIDDLGDDKTAIVFVNTRNKVDY 478
Query: 166 LAGLLPGA-----RALHGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQ 220
+ L LH Q QR+ +L+ F+ +F LV T+V RGLDI D+ +I
Sbjct: 479 IVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTTDVLGRGLDILDLAQVIN 538
Query: 221 CEPPRDVEAYIHRSGRTGRAGNTGVAVML 249
+ P ++ Y HR GRTGRAG TGVA
Sbjct: 539 YDMPNTMDLYTHRIGRTGRAGKTGVATTF 567
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 136/283 (48%), Gaps = 24/283 (8%)
Query: 10 GGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDV 69
GG L + V +++GTPGRI D ++ L V+DEAD++L F V
Sbjct: 235 GGTSLKDDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSV 294
Query: 70 ERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVRHIV- 128
E ++ + + Q L+FSAT PV VK +FL + +L+ +K T V
Sbjct: 295 EHLISFLPESR--QILMFSATFPVTVKDFKDRFLT-NPYVINLMDELTLKGITQFYAFVE 351
Query: 129 ----LPCSSS--ARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLPGARALHGDIQQ 182
+ C ++ ++ Q+ II C S ++ A ++ L +H + Q
Sbjct: 352 ERQKIHCLNTLFSKLQINQSIIFCNSVNRVELL-------AKKITELGYSCFYIHAKMLQ 404
Query: 183 SQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGN 242
R FR+G LV T++ RG+DI V ++I + P++ E Y+HR GR+GR G+
Sbjct: 405 DHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGH 464
Query: 243 TGVAVML--YDPRKSNFSKIERESGVKFEHISAPQPDDIAKAV 283
G+AV L Y+ R N +IE+E G + + I P I +A+
Sbjct: 465 LGLAVNLITYEDR-FNLYRIEQELGTEIKQI----PPHIDQAI 502
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 136/283 (48%), Gaps = 24/283 (8%)
Query: 10 GGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDV 69
GG L + V +++GTPGRI D ++ L V+DEAD++L F V
Sbjct: 235 GGTSLKDDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSV 294
Query: 70 ERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVRHIV- 128
E ++ + + Q L+FSAT PV VK +FL + +L+ +K T V
Sbjct: 295 EHLISFLPESR--QILMFSATFPVTVKDFKDRFLT-NPYVINLMDELTLKGITQFYAFVE 351
Query: 129 ----LPCSSS--ARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLPGARALHGDIQQ 182
+ C ++ ++ Q+ II C S ++ A ++ L +H + Q
Sbjct: 352 ERQKIHCLNTLFSKLQINQSIIFCNSVNRVELL-------AKKITELGYSCFYIHAKMLQ 404
Query: 183 SQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGN 242
R FR+G LV T++ RG+DI V ++I + P++ E Y+HR GR+GR G+
Sbjct: 405 DHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGH 464
Query: 243 TGVAVML--YDPRKSNFSKIERESGVKFEHISAPQPDDIAKAV 283
G+AV L Y+ R N +IE+E G + + I P I +A+
Sbjct: 465 LGLAVNLITYEDR-FNLYRIEQELGTEIKQI----PPHIDQAI 502
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 8 LYGGAPYHSQESNLKRGVD-IVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFV 66
L GGA QE LK+ IV+GTPGRI + + L RF VLDE DE+L F
Sbjct: 226 LVGGANRMRQEEALKKNKPAIVVGTPGRIAEISKGGKLHTHGCRFLVLDEVDELLSFNFR 285
Query: 67 EDVERIL------------GEVDDVNRVQTLLFSATLPVWVKQISTKF-LKPDKKTADLV 113
ED+ RIL GEVD+ QT+L SAT+P V + + + +P A+ V
Sbjct: 286 EDIHRILEHVGKRSGAGPKGEVDERANRQTILVSATVPFSVIRAAKSWSHEPVLVQANKV 345
Query: 114 GN-EKMKASTNVRHIVLPCSSSARAQL------IPDIIRCYSSGGR-------------- 152
+ ++ S V + P +S A Q+ +P ++ Y +
Sbjct: 346 TPLDTVQPSAPVMSLT-PTTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDTLRRCVHA 404
Query: 153 -----TIIFTEK----KESASELAGLLPGARALHGDIQQSQREITLKGFRSGKFMTLVAT 203
I F K+ +L + +HGD+ + R LK F++G+ LV
Sbjct: 405 LDAQSVIAFMNHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEIKVLVTN 464
Query: 204 NVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKSNF-SKIER 262
++ARGLD+ + L++ E P D Y HR+GRTGR G G V + + + K+E+
Sbjct: 465 ELSARGLDVAECDLVVNLELPTDAVHYAHRAGRTGRLGRKGTVVTVCEESQVFIVKKMEK 524
Query: 263 ESGVKF 268
+ G+ F
Sbjct: 525 QLGLPF 530
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 133/280 (47%), Gaps = 17/280 (6%)
Query: 1 MGLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDL----SKLRFRVLDE 56
+ L + GG +Q +L IVI TPGRIK +E N D+ S+ +F VLDE
Sbjct: 153 LNLRCSVIVGGMDMLTQTMSLVSRPHIVITTPGRIKVLLE-NNPDVPPVFSRTKFLVLDE 211
Query: 57 ADEMLRMGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNE 116
AD +L +GF +++ I + QTLLFSAT+ + K E
Sbjct: 212 ADRVLDVGFQDELRTIFQCLPKSR--QTLLFSATM---TSNLQALLEHSSNKAYFYEAYE 266
Query: 117 KMKA-STNVRHIVLPCSSSARAQLIPDIIRCYSSGGRT-IIFTEKKESASELAGLLPGAR 174
+K T + + + L+ + + G R+ +IF + L+ +L
Sbjct: 267 GLKTVDTLTQQFIFEDKDAKELYLVHILSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELE 326
Query: 175 ----ALHGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAY 230
A+H QS R L F+SGK L+AT+VA+RGLDI V L+I + PRD Y
Sbjct: 327 VENIAMHSLNSQSMRLSALSKFKSGKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDY 386
Query: 231 IHRSGRTGRAGNTGVAV-MLYDPRKSNFSKIERESGVKFE 269
+HR GRT RAG G+AV ++ + KIE E G K E
Sbjct: 387 VHRVGRTARAGRGGLAVSIITETDVKLIHKIEEEVGKKME 426
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 139/274 (50%), Gaps = 20/274 (7%)
Query: 2 GLNACCLYGGAPYHSQESNLKR-GVDIVIGTPGRIKDHIERQN-LDLSKLRFRVLDEADE 59
+N+ L GG + + L+ G +++IGTPGR+ D ++R LD L +LDEAD
Sbjct: 119 NVNSVLLVGGREVEADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADR 178
Query: 60 MLRMGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNE-KM 118
+L MGF + V I+ + R T LFSAT V ++ L+ + + G E K
Sbjct: 179 LLDMGFQKQVNYIISRLPKQRR--TGLFSATQTQAVADLAKAGLRNAMEV--ISGAESKS 234
Query: 119 KASTNVRHIVLPCSSSARA-QLIPDIIRCYSSGGRTIIFTEKKESASELAGL----LPGA 173
K S+ + L C + ++ QL+ +I + + ++F + + GL +P
Sbjct: 235 KTSSGLYCEYLKCEADQKSSQLVHLLIE--NKNKKLVVFF-MTCACVDYWGLVLSKIPTL 291
Query: 174 RAL-----HGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVE 228
+++ HG + Q R+ L F L+ T+VAARGLDI + ++Q +PP+D +
Sbjct: 292 KSISFFSTHGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPD 351
Query: 229 AYIHRSGRTGRAGNTGVAVMLYDPRKSNFSKIER 262
+IHR GRT R G A++ P+++++ + R
Sbjct: 352 VFIHRVGRTARMERQGRAIVFLMPKETDYVEFMR 385
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 130/260 (50%), Gaps = 21/260 (8%)
Query: 10 GGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQN-LDLSKLRFRVLDEADEMLRMGFVED 68
GG ++ L +GV++++ TPGR+ DH+E N L+F V+DEAD +L F ED
Sbjct: 262 GGEKRKTEAEILAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEED 321
Query: 69 VERILGEVDDVNRVQTLLFSATLPVWVKQI------STKFLKPDKKTADLVGNEKMKAST 122
+++IL + QT LFSAT V+ + S ++ D+ + V NE ++
Sbjct: 322 LKKILNLLPKTR--QTSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKE-VTNEGLEQG- 377
Query: 123 NVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLPGAR----ALHG 178
+ V+P S+ R + ++ + + ++F +S A L + + G
Sbjct: 378 ---YCVVP--SAMRLLFLLTFLKRFQGKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRG 432
Query: 179 DIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTG 238
I Q++R T F + L+ TNVAARGLD V I+Q +PP + YIHR GRT
Sbjct: 433 GIDQNKRTPTFLQFIKAETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTA 492
Query: 239 RA-GNTGVAVMLYDPRKSNF 257
R G G A+++ P++ F
Sbjct: 493 RGEGAKGKALLVLTPQELKF 512
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 117/236 (49%), Gaps = 15/236 (6%)
Query: 27 IVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRM-GFVEDVERILGEVDDVN-RVQT 84
+VIGTPG +K + + L L+ L+ V DEAD ML GF +D +I+ ++ VN Q
Sbjct: 217 VVIGTPGTLKKWMAFKRLGLNHLKILVFDEADHMLATDGFRDDSLKIMKDIGRVNPNFQV 276
Query: 85 LLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVRHIVLPCSSSARAQLIPDII 144
LLFSAT VK + +K + V E + + ++ V+ + ++I D I
Sbjct: 277 LLFSATFNETVKDFVARTVKDPNQL--FVKREDLALDSVKQYKVVCPKEQNKIEVIKDQI 334
Query: 145 RCYSSGGRTIIFTEKKESASE----LAGLLPGARALHGDIQQSQREITLKGFRSGKFMTL 200
G+TIIF + K SA + LA + ++HG++ +S R+ +K F+ L
Sbjct: 335 MELGDIGQTIIFVKTKASAQKVHKALAEMGYDVTSVHGNLTESDRDKIVKEFKECLTQVL 394
Query: 201 VATNVAARGLDINDVQLIIQCEPPR-------DVEAYIHRSGRTGRAGNTGVAVML 249
+AT+V ARG D V L++ P D E Y+HR GR GR G G L
Sbjct: 395 IATDVIARGFDQQRVNLVVNYNLPTKYETGEPDYEVYLHRVGRAGRFGRKGAVFNL 450
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 138/285 (48%), Gaps = 28/285 (9%)
Query: 10 GGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDV 69
GG L + V +++GTPGRI D ++ L V+DEAD++L + F +
Sbjct: 258 GGTSLRDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSVEFQPSI 317
Query: 70 ERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKP-------DKKTADLVGNEKMKAST 122
E ++ + + Q L+FSAT PV VK ++LK D+ T L+G + A
Sbjct: 318 EELIQFLPESR--QILMFSATFPVTVKSFKDRYLKKPYIINLMDQLT--LMGVTQYYAFV 373
Query: 123 NVRHIVLPCSSS--ARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLPGARALHGDI 180
R V C ++ ++ Q+ II C S ++ A ++ L +H +
Sbjct: 374 EERQKVH-CLNTLFSKLQINQSIIFCNSVNRVELL-------AKKITELGYSCFYIHAKM 425
Query: 181 QQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRA 240
Q R FR+G LV T++ RG+DI V ++I + PR E+Y+HR GR+GR
Sbjct: 426 VQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRF 485
Query: 241 GNTGVAVML--YDPRKSNFSKIERESGVKFEHISAPQPDDIAKAV 283
G+ G+AV L Y+ R + + E+E G + + P P I KA+
Sbjct: 486 GHLGLAVNLVTYEDRFKMY-QTEQELGTEIK----PIPSLIDKAI 525
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 139/282 (49%), Gaps = 14/282 (4%)
Query: 1 MGLNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHI-ERQNLDLSKLRFRVLDEADE 59
+ L L GG Q L + +++ TPGR+ DH+ + + L L++ VLDEAD
Sbjct: 116 ISLRCAVLVGGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADR 175
Query: 60 MLRMGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLK-PDKKTADLVGNEKM 118
+L F + + +IL E+ + R +T LFSAT+ V+++ L+ P K A +
Sbjct: 176 LLNEDFEKSLNQILEEIP-LER-KTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVD 233
Query: 119 KASTNVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLP--GARAL 176
R + ++ ++ S +IFT + LA +L G RA+
Sbjct: 234 TLKQQYRFVAAKYKDCYLVYILSEMPESTS-----MIFTRTCDGTRFLALVLRSLGFRAI 288
Query: 177 --HGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRS 234
G + QS+R L F++G+ LV T+VA+RGLDI V ++I + P + + YIHR
Sbjct: 289 PISGQMTQSKRLGALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRV 348
Query: 235 GRTGRAGNTGVAVMLYDPRK-SNFSKIERESGVKFEHISAPQ 275
GRT RAG +GV + L + + + +IE+ G K A +
Sbjct: 349 GRTARAGRSGVGISLVNQYELEWYIQIEKLIGKKLPEYPAEE 390
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 3 LNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLR 62
+ GG P Q +++GV+++IGTPGR+ D + + ++L + VLDE D ML+
Sbjct: 78 FKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQ 137
Query: 63 MGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKAST 122
GF + V +I +++ Q LLFSAT+ V+++ K + +GN K +
Sbjct: 138 RGFRDQVMQIF---QALSQPQVLLFSATISREVEKVGGSLAKEIILVS--IGNPN-KPNK 191
Query: 123 NVRHIVLPCSSSARAQLIPDIIRCYSS-GGRTIIFTEKKESASELAG---LLPGARAL-- 176
V + + + + Q + DI+R + +++ + A LA ++ G +AL
Sbjct: 192 AVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSI 251
Query: 177 HGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGR 236
HG+ +R + F G+ LV+T V RG+D+ V+ +I + P ++ YIH GR
Sbjct: 252 HGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGR 311
Query: 237 TGRAGNTGVAVMLYDPRKSNF 257
R G G A++ + N
Sbjct: 312 ASRMGEKGTAIVFVNEDDRNL 332
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 127/267 (47%), Gaps = 30/267 (11%)
Query: 3 LNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLR 62
+ + GG+ QE +L +D+V+GTPGRI HIE N+ + + VLDEAD M
Sbjct: 218 FRSILVSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFD 277
Query: 63 MGFVEDVERILGEVD------DVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNE 116
GF ++ + L ++ + QT+L +AT+ + V+++ + + G E
Sbjct: 278 RGFGPEIRKFLAPLNQRALKTNDQGFQTVLVTATMTMAVQKLVDE---------EFQGIE 328
Query: 117 KMKAST------NVRH--IVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAG 168
++ ST N RH I L L+ + + G + ++F S+ +
Sbjct: 329 HLRTSTLHKKIANARHDFIKLSGGEDKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDH 388
Query: 169 LLPGAR----ALHGDIQQSQREITLKGFR--SGKFMTLVATNVAARGLDINDVQLIIQCE 222
L + HG++ QR LK F+ G TLV T++AARGLD+ DV ++ +
Sbjct: 389 YLSENQISTVNYHGEVPAEQRVENLKKFKDEEGDCPTLVCTDLAARGLDL-DVDHVVMFD 447
Query: 223 PPRDVEAYIHRSGRTGRAGNTGVAVML 249
P++ Y+HR+GRT R G G L
Sbjct: 448 FPKNSIDYLHRTGRTARMGAKGKVTSL 474
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 128/256 (50%), Gaps = 12/256 (4%)
Query: 8 LYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVE 67
+ GG P Q +++GV+++IGTPGR+ D + + ++L + VLDE D ML+ GF +
Sbjct: 220 VVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRD 279
Query: 68 DVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVRHI 127
V +I +++ Q LLFSAT+ V+++ K + +GN K + V +
Sbjct: 280 QVMQIF---QALSQPQVLLFSATISREVEKVGGSLAKEIILVS--IGNPN-KPNKAVNQL 333
Query: 128 VLPCSSSARAQLIPDIIRCYSS-GGRTIIFTEKKESASELAG---LLPGARAL--HGDIQ 181
+ + + Q + DI+R + +++ + A LA ++ G +AL HG+
Sbjct: 334 AIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKP 393
Query: 182 QSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAG 241
+R + F G+ LV+T V RG+D+ V+ +I + P ++ YIH GR R G
Sbjct: 394 MKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMG 453
Query: 242 NTGVAVMLYDPRKSNF 257
G A++ + N
Sbjct: 454 EKGTAIVFVNEDDRNL 469
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 128/256 (50%), Gaps = 12/256 (4%)
Query: 8 LYGGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVE 67
+ GG P Q +++GV+++IGTPGR+ D + + ++L + VLDE D ML+ GF +
Sbjct: 220 VVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRD 279
Query: 68 DVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVRHI 127
V +I +++ Q LLFSAT+ V+++ K + +GN K + V +
Sbjct: 280 QVMQIF---QALSQPQVLLFSATISREVEKVGGSLAKEIILVS--IGNPN-KPNKAVNQL 333
Query: 128 VLPCSSSARAQLIPDIIRCYSS-GGRTIIFTEKKESASELAG---LLPGARAL--HGDIQ 181
+ + + Q + DI+R + +++ + A LA ++ G +AL HG+
Sbjct: 334 AIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKP 393
Query: 182 QSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAG 241
+R + F G+ LV+T V RG+D+ V+ +I + P ++ YIH GR R G
Sbjct: 394 MKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMG 453
Query: 242 NTGVAVMLYDPRKSNF 257
G A++ + N
Sbjct: 454 EKGTAIVFVNEDDRNL 469
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 147/328 (44%), Gaps = 72/328 (21%)
Query: 10 GGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSK-LRFRVLDEADEMLRMGFVED 68
GG +++ L++G+ I+I TPGR+ DH++ + K LR+ + DEAD +L +G+ ++
Sbjct: 141 GGEKKAKEKARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDEADSILELGYGKE 200
Query: 69 VERIL----------GEVDDVN----RVQTLLFSATL--------------PVWVKQIST 100
+E+I+ GE DD+ + Q LL SATL PV + +T
Sbjct: 201 IEQIIKLLGSGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDLAKLSLDDPVMIGLDNT 260
Query: 101 KFLK---------PDKKTADLVGNEKMKASTNV-----------RHIVLPCSSSARAQL- 139
K + PD D+V + A+ R++ +PC + A L
Sbjct: 261 KLQQNLSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQRYLRVPCGARLVALLS 320
Query: 140 -IPDIIRCYSSGGRTIIFT---------------------EKKESASELAGLLPGARALH 177
+ ++ +S + F+ E +E ++ L LH
Sbjct: 321 VLKNLFEREASQKVVVFFSTRDAVDFHYSLLSEFQWPPNSETEEEGTKELFLKCKTFRLH 380
Query: 178 GDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRT 237
G ++Q R F++ K L++T+VAARGLD V+ IIQ + P + Y+HR GRT
Sbjct: 381 GSMEQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATEYVHRVGRT 440
Query: 238 GRAGNTGVAVMLYDPRKSNFSKIERESG 265
R G G A++ P + ++ K ++ G
Sbjct: 441 ARIGEKGEALLFLQPIEIDYLKELKKHG 468
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 139/285 (48%), Gaps = 28/285 (9%)
Query: 10 GGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDV 69
GG L + V +++GTPGRI D ++ L V+DEAD++L F +
Sbjct: 228 GGTSLRDDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSL 287
Query: 70 ERILGEVDDVNRVQTLLFSATLPVWVKQISTKFL-KP------DKKTADLVGNEKMKAST 122
E ++ + NR Q L+FSAT PV VK + L KP D+ T L+G + A
Sbjct: 288 EELIQFLPQ-NR-QFLMFSATFPVTVKAFKDRHLRKPYVINLMDQLT--LMGVTQYYAFV 343
Query: 123 NVRHIVLPCSSS--ARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLPGARALHGDI 180
R V C ++ ++ Q+ II C S ++ A ++ L +H +
Sbjct: 344 EERQKVH-CLNTLFSKLQINQSIIFCNSVNRVELL-------AKKITELGYSCFYIHAKM 395
Query: 181 QQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRA 240
Q R FR+G LV T++ RG+DI V ++I + PR E+Y+HR GR+GR
Sbjct: 396 VQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRF 455
Query: 241 GNTGVAVML--YDPRKSNFSKIERESGVKFEHISAPQPDDIAKAV 283
G+ G+AV L Y+ R + + E+E G + + P P +I +A+
Sbjct: 456 GHLGLAVNLVTYEDRFKMY-QTEQELGTEIK----PIPSNIDQAI 495
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 139/285 (48%), Gaps = 28/285 (9%)
Query: 10 GGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDV 69
GG L + V +++GTPGRI D ++ L V+DEAD++L F +
Sbjct: 228 GGTSLRDDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSL 287
Query: 70 ERILGEVDDVNRVQTLLFSATLPVWVKQISTKFL-KP------DKKTADLVGNEKMKAST 122
E ++ + NR Q L+FSAT PV VK + L KP D+ T L+G + A
Sbjct: 288 EELIQFLPQ-NR-QFLMFSATFPVTVKAFKDRHLRKPYVINLMDQLT--LMGVTQYYAFV 343
Query: 123 NVRHIVLPCSSS--ARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLPGARALHGDI 180
R V C ++ ++ Q+ II C S ++ A ++ L +H +
Sbjct: 344 EERQKVH-CLNTLFSKLQINQSIIFCNSVNRVELL-------AKKITELGYSCFYIHAKM 395
Query: 181 QQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRA 240
Q R FR+G LV T++ RG+DI V ++I + PR E+Y+HR GR+GR
Sbjct: 396 VQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRF 455
Query: 241 GNTGVAVML--YDPRKSNFSKIERESGVKFEHISAPQPDDIAKAV 283
G+ G+AV L Y+ R + + E+E G + + P P +I +A+
Sbjct: 456 GHLGLAVNLVTYEDRFKMY-QTEQELGTEIK----PIPSNIDQAI 495
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 117/246 (47%), Gaps = 11/246 (4%)
Query: 8 LYGGAPYHSQESNLKRGV-DIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLR-MGF 65
YGG + LK IV+GTPGR+ ++L L +R +LDE D+ML +
Sbjct: 149 FYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDM 208
Query: 66 VEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVR 125
DV+ I + Q ++FSATL ++ + KF++ D + K+ V+
Sbjct: 209 RRDVQEIFKMTP--HDKQVMMFSATLSKEIRPVCKKFMQ-DPMEIYVDDEAKLTLHGLVQ 265
Query: 126 HIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLPGAR----ALHGDIQ 181
H + S + + + D++ + +IF + A+EL LL +H +
Sbjct: 266 HYI-KLSEMEKNRKLNDLLDALDFN-QVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 323
Query: 182 QSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAG 241
Q +R K F+ G LVAT++ RG+DI V ++I + P + Y+HR GR GR G
Sbjct: 324 QEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 383
Query: 242 NTGVAV 247
G+A+
Sbjct: 384 TKGLAI 389
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 117/246 (47%), Gaps = 11/246 (4%)
Query: 8 LYGGAPYHSQESNLKRGV-DIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLR-MGF 65
YGG + LK IV+GTPGR+ ++L L +R +LDE D+ML +
Sbjct: 149 FYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDM 208
Query: 66 VEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVR 125
DV+ I + Q ++FSATL ++ + KF++ D + K+ V+
Sbjct: 209 RRDVQEIFKMTP--HDKQVMMFSATLSKEIRPVCKKFMQ-DPMEIYVDDEAKLTLHGLVQ 265
Query: 126 HIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLPGAR----ALHGDIQ 181
H + S + + + D++ + +IF + A+EL LL +H +
Sbjct: 266 HYI-KLSEMEKNRKLNDLLDALDFN-QVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 323
Query: 182 QSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAG 241
Q +R K F+ G LVAT++ RG+DI V ++I + P + Y+HR GR GR G
Sbjct: 324 QEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 383
Query: 242 NTGVAV 247
G+A+
Sbjct: 384 TKGLAI 389
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 117/246 (47%), Gaps = 11/246 (4%)
Query: 8 LYGGAPYHSQESNLKRGV-DIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLR-MGF 65
YGG + LK IV+GTPGR+ ++L L +R +LDE D+ML +
Sbjct: 66 FYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDM 125
Query: 66 VEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVR 125
DV+ I + Q ++FSATL ++ + KF++ D + K+ V+
Sbjct: 126 RRDVQEIFKMTP--HDKQVMMFSATLSKEIRPVCKKFMQ-DPMEIYVDDEAKLTLHGLVQ 182
Query: 126 HIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLPGAR----ALHGDIQ 181
H + S + + + D++ + +IF + A+EL LL +H +
Sbjct: 183 HYI-KLSEMEKNRKLNDLLDALD-FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 240
Query: 182 QSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAG 241
Q +R K F+ G LVAT++ RG+DI V ++I + P + Y+HR GR GR G
Sbjct: 241 QEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 300
Query: 242 NTGVAV 247
G+A+
Sbjct: 301 TKGLAI 306
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 135/305 (44%), Gaps = 61/305 (20%)
Query: 8 LYGGAPYHSQESNLKRGVDIVIGTPGRIKDHI---ERQNLDLSKLRFRVLDEADEMLRMG 64
+ GG QE LK +IV+ TPGR+ + + E+ ++L L F VLDEAD M+ G
Sbjct: 313 IVGGMFSEKQERRLKEKPEIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVERG 372
Query: 65 FVEDVERIL-----------GEVDDVN-----------RVQTLLFSATLPVWVKQISTKF 102
+++ IL G+ V + QT +FSAT+ +S+ F
Sbjct: 373 HFRELQSILDLLPVTDKPNEGKTQTVKSNDTVLNVPKKKRQTFVFSATIA-----LSSDF 427
Query: 103 LKPDKKTADL-------------VGNEKMKASTNVRHIVLPCSSSARAQLIPDIIRCYSS 149
K K+ + V +E+ NV I L +S ++ I+C
Sbjct: 428 RKKLKRGSSKSKQSSSGEVNSIEVLSERAGMRDNVAIIDLTTTSILAPKIEESFIKCEEK 487
Query: 150 --------------GGRTIIFTEKKESASELAGLLP----GARALHGDIQQSQREITLKG 191
GRTI+F ++GLL L +++Q R ++
Sbjct: 488 EKDAYLYYILSVHGQGRTIVFCTSVTDLRHISGLLKILGLDVCTLFSEMKQRARLKSIDR 547
Query: 192 FRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYD 251
FR+ + L+AT++ ARG+DI +V+ II + P E Y+HR GRT RA G ++ L +
Sbjct: 548 FRASENGILIATDLVARGIDIKNVRTIIHYKLPHSAEVYVHRCGRTARAFADGCSIALIE 607
Query: 252 PRKSN 256
P +++
Sbjct: 608 PNETS 612
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 124/258 (48%), Gaps = 18/258 (6%)
Query: 10 GGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSK-LRFRVLDEADEMLRMGFVED 68
GG S+ + G ++VI TPGR+ DH++ + K L+ V+DEAD +L F ED
Sbjct: 197 GGNNRRSEAQRIASGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEED 256
Query: 69 VERILGEVDDVNRVQTLLFSATLPVWVKQIS-TKFLKPDKKTAD----LVGNEKMKASTN 123
+ +IL + QT LFSAT VK ++ P D V NE ++
Sbjct: 257 MNKILKILPKTR--QTALFSATQTSKVKDLARVSLTSPVHVDVDDGRRKVTNEGLEQG-- 312
Query: 124 VRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKK--ESASELAGLLP-GARALHGDI 180
+ V+P S R L+ ++ + + F+ K + +E+ + +HG +
Sbjct: 313 --YCVVP--SKQRLILLISFLKKNLNKKIMVFFSTCKSVQFHTEIMKISDVDVSDIHGGM 368
Query: 181 QQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRA 240
Q++R T F K L+ T+VAARGLDI V IIQ +PP YIHR GRT R
Sbjct: 369 DQNRRTKTFFDFMKAKKGILLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTARG 428
Query: 241 -GNTGVAVMLYDPRKSNF 257
G G A+++ P + F
Sbjct: 429 EGAKGKALLVLIPEELQF 446
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 120/289 (41%), Gaps = 44/289 (15%)
Query: 20 NLKRGVDIVIGTPGRIKDHIER-QNLDLSKLRFRVLDEADEMLRMG-------------- 64
NL+ VDI++ TPGR+ DHI + L LR+ V+DE D +LR
Sbjct: 171 NLESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQT 230
Query: 65 --------FVEDVERILGEVDDVNR--VQTLLFSATLPVWVKQISTKFLKPDKKTA---D 111
F V G + V R V+ P VK + + L D D
Sbjct: 231 SDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLD 290
Query: 112 L-------VGNEKMKASTNVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESAS 164
L G + + + + L C + + + +++ + G + IIFT E+
Sbjct: 291 LHHPLFMTTGGSRYRLPEKLECLRLICETGMKPVYLVALLKSWE-GEKCIIFTSSVETTR 349
Query: 165 ELAGLLP-------GARALHGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQL 217
L LL A+ G + QS R LK FR G LVA++ RG+D+ V
Sbjct: 350 RLCKLLNFFGDPKIKAKEYSGGLNQSLRSKELKAFRKGDIQVLVASDALTRGMDVKGVTN 409
Query: 218 IIQCEPPRDVEAYIHRSGRTGRAGNTG-VAVMLYDPRKSNFSKIERESG 265
+I + P + +IHR+GRT RAG G +L + FSK+ + G
Sbjct: 410 VINYDMPPFAKTFIHRAGRTARAGQAGRCFTLLSNHEVRRFSKLLEKVG 458
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 115/284 (40%), Gaps = 46/284 (16%)
Query: 8 LYGGAPYHSQESNLKRGV-DIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLR-MGF 65
YGG + LK IV+GTPGR+ ++L L +R +LDE D+ML +
Sbjct: 149 FYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDM 208
Query: 66 VEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVR 125
DV+ I + Q ++FSATL ++ + KF++ +T
Sbjct: 209 RRDVQEIFKMTP--HDKQVMMFSATLSKEIRPVCKKFMQDGLRTLSGDSVALWWVGFGSG 266
Query: 126 HIVLPCSSSARAQL-IP---DIIRCYSSG------------------------------- 150
+ V P AR L +P D + Y
Sbjct: 267 YCVFPRFHRARMGLNVPSNIDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDA 326
Query: 151 ---GRTIIFTEKKESASELAGLLPGAR----ALHGDIQQSQREITLKGFRSGKFMTLVAT 203
+ +IF + A+EL LL +H + Q +R K F+ G LVAT
Sbjct: 327 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVAT 386
Query: 204 NVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAV 247
++ RG+DI V ++I + P + Y+HR GR GR G G+A+
Sbjct: 387 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI 430
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 13/279 (4%)
Query: 3 LNACCLYGGAPYHSQESNLKRGVDIVIGTPGRIKDHI-ERQNLDLSKLRFRVLDEADEML 61
+A L GG E ++I++ PGR+ H+ E N + +L+ +LDEAD +L
Sbjct: 172 FSAGLLIGGREGVDVEKERVHEMNILVCAPGRLLQHMDETPNFECPQLQILILDEADRVL 231
Query: 62 RMGFVEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKAS 121
F ++ I+ ++ QTLLFSAT VK ++ L+ D + +
Sbjct: 232 DSAFKGQLDPIISQLP--KHRQTLLFSATQTKKVKDLARLSLR-DPEYISVHAEAVTATP 288
Query: 122 TNVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESAS----ELAGLLPGA--RA 175
T++ V+ + ++ I+ + + R ++F K+ L PG ++
Sbjct: 289 TSLMQTVMIVPVEKKLDMLWSFIKTHLNS-RILVFLSTKKQVKFVHEAFNKLRPGIPLKS 347
Query: 176 LHGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDIND-VQLIIQCEPPRDVEAYIHRS 234
LHG + Q +R F + + L T+V ARGLD + V ++Q + P DV +YIHR
Sbjct: 348 LHGKMSQEKRMGVYSQFIERQSV-LFCTDVLARGLDFDKAVDWVVQVDCPEDVASYIHRV 406
Query: 235 GRTGRAGNTGVAVMLYDPRKSNFSKIERESGVKFEHISA 273
GRT R G +++ P + + +E+ V + I A
Sbjct: 407 GRTARFYTQGKSLLFLTPSEEKMIEKLQEAKVPIKLIKA 445
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 111/256 (43%), Gaps = 28/256 (10%)
Query: 10 GGAPYHSQESNLKRGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGFVEDV 69
GG +Q NL++GVD++I TPGR + L LS LR +LDE D + E
Sbjct: 488 GGFRQRTQLENLEQGVDVLIATPGRFTYLMNEGILGLSNLRCAILDEVDILFGDDEFEAA 547
Query: 70 ERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVRHIVL 129
+ L V Q L +ATLP+ +I K ++ ++G + S + ++
Sbjct: 548 LQNLINSSPVT-AQYLFVTATLPL---EIYNKLVEVFPDCEVVMGPRVHRVSNALEEFLV 603
Query: 130 PCSSSARAQLIPDI-----------IRCYSSGGRTIIFTEKKESASELAGLLP----GAR 174
CS A+ P+ I + +TIIF K E+ ++ + R
Sbjct: 604 DCSGDDNAEKTPETAFQNKKTALLQIMEENPVSKTIIFCNKIETCRKVENIFKRVDRKER 663
Query: 175 AL-----HGDIQQSQREITLKGFRSGK----FMTLVATNVAARGLDINDVQLIIQCEPPR 225
L H + Q R ++ F S + + LV T+ A+RG+D + V ++ + PR
Sbjct: 664 QLHVLPFHAALSQESRLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFPR 723
Query: 226 DVEAYIHRSGRTGRAG 241
D Y+ R GRT R
Sbjct: 724 DPSEYVRRVGRTARGA 739
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 37/206 (17%)
Query: 24 GVDIVIGTPGRIKDHIERQN-LDLSKLRFRVLDEADEMLRMGFVEDVERILGEVDDVNRV 82
G +++IGTPGR+ D ++R LD L +LDEAD +L MGF + V I+ + R
Sbjct: 135 GANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRR- 193
Query: 83 QTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVRHIVLPCSSSAR-AQLIP 141
T LFSAT + ADL A +R+ L C + + +QL+
Sbjct: 194 -TGLFSAT--------------QTQAVADL-------AKAGLRNPYLKCEADQKSSQLVH 231
Query: 142 DIIRCYSSGGRTIIFTEKKESASELAGL----LPGARAL-----HGDIQQSQREITLKGF 192
+I + + ++F + + GL +P +++ HG + Q R+ L F
Sbjct: 232 LLIE--NKNKKLVVFF-MTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASF 288
Query: 193 RSGKFMTLVATNVAARGLDINDVQLI 218
L+ T+VAARGLDI + I
Sbjct: 289 TEASSGVLLCTDVAARGLDIPGIVYI 314
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 151 GRTIIFTEKKESASELAGLLPGAR----ALHGDIQQSQREITLKGFRSGKFMTLVATNVA 206
+ +IF + A+EL LL +H + Q +R K F+ G LVAT++
Sbjct: 348 NQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLV 407
Query: 207 ARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAV 247
RG+DI V ++I + P + Y+HR GR GR G G+A+
Sbjct: 408 GRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI 448
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 107/260 (41%), Gaps = 24/260 (9%)
Query: 2 GLNACCLYGGAPYHSQESNLK-RGVDIVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEM 60
G L G +S LK I++ T + +E+ + +R V+DE D +
Sbjct: 177 GCTVMALLDGGTLRRHKSWLKAEPPAILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFL 236
Query: 61 LRMGF-VEDVERILGEVDDVNRVQTLLFSATLPVWVKQISTKFLKPDKKTADLVG---NE 116
V V ++L ++ QT+ SA++P K ++ D+V +
Sbjct: 237 FYSSKQVGSVRKLLTSFSSCDKRQTVFASASIPQH-KHFVHDCIQQKWTKRDVVHVHVSA 295
Query: 117 KMKASTNVRHIVLPCSSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGLLPGARAL 176
M + H + C + + Q++ ++ + IIF ++ S+ AG P L
Sbjct: 296 IMPMPLCLLHRFVMCEKTNKHQVLLALLES-DAPESAIIFVGEQSEKSKKAGNDPSTTLL 354
Query: 177 -----------------HGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLII 219
GD+ + R +L R G LV+T++AARG+D+ + I
Sbjct: 355 MEFLKTSYKGSLEILLLEGDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIF 414
Query: 220 QCEPPRDVEAYIHRSGRTGR 239
+ P+ V Y+HR+GR GR
Sbjct: 415 NFDLPQTVTDYLHRAGRAGR 434
>AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6462100-6463687
FORWARD LENGTH=315
Length = 315
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 27 IVIGTPGRIKDHIERQNLDLSKLRFRVLDEADEMLRMGF-VEDVERILGEVDDVNRVQTL 85
I++ T + +E+ + +R V+DE D + V V ++L ++ QT+
Sbjct: 46 ILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSFSSCDKRQTV 105
Query: 86 LFSATLPVWVKQISTKFLKPDKKTADLVG---NEKMKASTNVRHIVLPCSSSARAQLIPD 142
SA++P K ++ D+V + M + H + C + + Q++
Sbjct: 106 FASASIPQH-KHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKTNKHQVLLA 164
Query: 143 IIRCYSSGGRTIIFTEKKESASELAGLLPGARAL-----------------HGDIQQSQR 185
++ + IIF ++ S+ AG P L GD+ + R
Sbjct: 165 LLES-DAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMNFNSR 223
Query: 186 EITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGR 239
+L R G LV+T++AARG+D+ + I + P+ V Y+HR+GR GR
Sbjct: 224 AASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGR 277
>AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:22090369-22092885 REVERSE LENGTH=581
Length = 581
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 12/191 (6%)
Query: 83 QTLLFSATLPVWVKQISTKFLKPDKKTADLV-GNEKMKASTNVRHIVLPCSSSARAQLIP 141
Q + +ATLPV K+ + LK + A V GN + S ++ + + ++ +
Sbjct: 354 QYIFIAATLPVNGKKTAGGILKHMFQDAVWVSGNFLHRNSPRLKQKWVEVTVDSQVDALI 413
Query: 142 DIIRCYSSGG--RTIIFTEKKESASELAGLLPGARA----LHGDIQQSQREITLKGFRS- 194
+ ++ ++ RT++F E+ +A +L A H + + +R L FR
Sbjct: 414 EAVKNNNNTNTERTMVFANTVEAVEAVADILEKASIQCYRYHKNHKLDERANILADFRET 473
Query: 195 -GKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPR 253
G F V T+ AARG+D+ +V +IQ + ++HR GRT RAG G LY
Sbjct: 474 GGVF---VCTDAAARGVDVPNVSHVIQADFASSAVDFLHRIGRTARAGQYGTVTSLYTEA 530
Query: 254 KSNFSKIERES 264
+ + RE+
Sbjct: 531 NRDLVEAIREA 541
>AT1G35530.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:13089994-13097078 FORWARD LENGTH=1324
Length = 1324
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 163 ASELAGLLPGARALHGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCE 222
A+E G G + L G Q+ Q+ + L+ FR+G F +VAT++ GLDI +V L+I +
Sbjct: 496 ATEFIGQSSG-KTLKGQSQKIQQAV-LEKFRAGGFNVIVATSIGEEGLDIMEVDLVICFD 553
Query: 223 PPRDVEAYIHRSGRTGRAGNTGVAVMLYDP 252
I R GRTGR N G +Y P
Sbjct: 554 ANVSPLRMIQRMGRTGRKNN-GRIPHVYKP 582