Miyakogusa Predicted Gene

Lj0g3v0244969.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0244969.1 Non Chatacterized Hit- tr|B9RTE4|B9RTE4_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,57.53,4e-18,seg,NULL; UNCHARACTERIZED,NULL,CUFF.16011.1
         (118 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G04280.1 | Symbols:  | P-loop containing nucleoside triphosph...    85   1e-17
AT1G06750.2 | Symbols:  | P-loop containing nucleoside triphosph...    72   1e-13
AT1G06750.1 | Symbols:  | P-loop containing nucleoside triphosph...    72   1e-13
AT2G30630.2 | Symbols:  | P-loop containing nucleoside triphosph...    67   2e-12
AT2G30630.1 | Symbols:  | P-loop containing nucleoside triphosph...    67   2e-12

>AT1G04280.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:1143643-1146541
           REVERSE LENGTH=534
          Length = 534

 Score = 84.7 bits (208), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 39/74 (52%), Positives = 54/74 (72%)

Query: 44  DKNIIPHLERTESGRVARIEKFSHYVARQIGFEEEDQVPALCIVAQDYLRKSKGCDQSIY 103
           D  I P +ER +SGR + +E+FSHYVARQ+GFE+ ++ P LC +A  YL K+KG D+++ 
Sbjct: 59  DVKIAPLIERKDSGRRSNLERFSHYVARQLGFEDPNEYPQLCKLANGYLLKTKGYDENVD 118

Query: 104 EYLANENDAGSLYV 117
           EYL NE +  SLYV
Sbjct: 119 EYLENEAERDSLYV 132


>AT1G06750.2 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:2073882-2076350
           FORWARD LENGTH=526
          Length = 526

 Score = 71.6 bits (174), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 52/76 (68%), Gaps = 1/76 (1%)

Query: 44  DKNIIPHLERTESGRV-ARIEKFSHYVARQIGFEEEDQVPALCIVAQDYLRKSKGCDQSI 102
           D  IIP L+ +   +   ++E+FSHYVARQ+GF++  + P LC +A +Y+ KS+ C++ I
Sbjct: 46  DTKIIPRLKSSHKHKGHEKLERFSHYVARQMGFKDRRECPNLCKLAAEYISKSECCEEDI 105

Query: 103 YEYLANENDAGSLYVK 118
           Y + + E DA +L++K
Sbjct: 106 YSFFSEEPDADTLFIK 121


>AT1G06750.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:2073882-2076350
           FORWARD LENGTH=519
          Length = 519

 Score = 71.6 bits (174), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 52/76 (68%), Gaps = 1/76 (1%)

Query: 44  DKNIIPHLERTESGRV-ARIEKFSHYVARQIGFEEEDQVPALCIVAQDYLRKSKGCDQSI 102
           D  IIP L+ +   +   ++E+FSHYVARQ+GF++  + P LC +A +Y+ KS+ C++ I
Sbjct: 39  DTKIIPRLKSSHKHKGHEKLERFSHYVARQMGFKDRRECPNLCKLAAEYISKSECCEEDI 98

Query: 103 YEYLANENDAGSLYVK 118
           Y + + E DA +L++K
Sbjct: 99  YSFFSEEPDADTLFIK 114


>AT2G30630.2 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr2:13046883-13049106
           REVERSE LENGTH=552
          Length = 552

 Score = 67.4 bits (163), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 48/72 (66%), Gaps = 1/72 (1%)

Query: 48  IPHLERTESGRV-ARIEKFSHYVARQIGFEEEDQVPALCIVAQDYLRKSKGCDQSIYEYL 106
           IP L  ++  +   ++E+FSHYV RQ+GF++  + P LC +A +Y+RKS  C++ IY + 
Sbjct: 57  IPRLRSSQKHKGHEKLERFSHYVVRQMGFKDRRECPHLCKLANEYIRKSGSCEEDIYSFF 116

Query: 107 ANENDAGSLYVK 118
           + E  A SL++K
Sbjct: 117 SEEPGADSLFIK 128


>AT2G30630.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr2:13046883-13049106
           REVERSE LENGTH=531
          Length = 531

 Score = 67.4 bits (163), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 48/72 (66%), Gaps = 1/72 (1%)

Query: 48  IPHLERTESGRV-ARIEKFSHYVARQIGFEEEDQVPALCIVAQDYLRKSKGCDQSIYEYL 106
           IP L  ++  +   ++E+FSHYV RQ+GF++  + P LC +A +Y+RKS  C++ IY + 
Sbjct: 57  IPRLRSSQKHKGHEKLERFSHYVVRQMGFKDRRECPHLCKLANEYIRKSGSCEEDIYSFF 116

Query: 107 ANENDAGSLYVK 118
           + E  A SL++K
Sbjct: 117 SEEPGADSLFIK 128