Miyakogusa Predicted Gene

Lj0g3v0244679.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0244679.1 tr|G7JI50|G7JI50_MEDTR Phospholipase D
OS=Medicago truncatula GN=MTR_4g010650 PE=3 SV=1,84.85,0,PHOPHOLIPASE
D ALPHA,NULL; PHOSPHOLIPASE D,Phospholipase D family; Protein kinase C
conserved region,NODE_24000_length_555_cov_703.095520.path2.1
         (132 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G15730.1 | Symbols: PLDALPHA1, PLD | phospholipase D alpha 1 ...   207   1e-54
AT1G52570.1 | Symbols: PLDALPHA2 | phospholipase D alpha 2 | chr...   189   5e-49
AT5G25370.1 | Symbols: PLDALPHA3 | phospholipase D alpha 3 | chr...   120   4e-28
AT4G11850.1 | Symbols: PLDGAMMA1, MEE54 | phospholipase D gamma ...    67   2e-12
AT4G11830.2 | Symbols: PLDGAMMA2 | phospholipase D gamma 2 | chr...    67   5e-12
AT2G42010.1 | Symbols: PLDBETA1, PLDBETA | phospholipase D beta ...    66   5e-12
AT4G35790.2 | Symbols: ATPLDDELTA, PLDDELTA | phospholipase D de...    65   1e-11
AT4G35790.1 | Symbols: ATPLDDELTA, PLDDELTA | phospholipase D de...    65   1e-11
AT4G35790.3 | Symbols: ATPLDDELTA, PLDDELTA | phospholipase D de...    65   1e-11
AT4G11840.1 | Symbols: PLDGAMMA3 | phospholipase D gamma 3 | chr...    65   1e-11
AT4G11830.1 | Symbols: PLDGAMMA2 | phospholipase D gamma 2 | chr...    65   1e-11
AT4G00240.1 | Symbols: PLDBETA2 | phospholipase D beta 2 | chr4:...    63   5e-11

>AT3G15730.1 | Symbols: PLDALPHA1, PLD | phospholipase D alpha 1 |
           chr3:5330835-5333474 FORWARD LENGTH=810
          Length = 810

 Score =  207 bits (528), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 98/133 (73%), Positives = 115/133 (86%), Gaps = 1/133 (0%)

Query: 1   MAQILLHGTLHATVFEVDKLKSGG-GGNFLSKIKQNFEETVGFGKGVTKLYATVDLEKAR 59
           MAQ LLHGTLHAT++EVD L  GG    FL KI  N EET+G GKG T+LYAT+DL+KAR
Sbjct: 1   MAQHLLHGTLHATIYEVDALHGGGVRQGFLGKILANVEETIGVGKGETQLYATIDLQKAR 60

Query: 60  VGRTRIIENEESNPRWYESFHIYCAHLASNIIFTVKDDNPIGATLIGRAYVPVEEVLDGE 119
           VGRTR I+NE  NP+WYESFHIYCAHLAS+IIFTVKDDNPIGATLIGRAY+PV++V++GE
Sbjct: 61  VGRTRKIKNEPKNPKWYESFHIYCAHLASDIIFTVKDDNPIGATLIGRAYIPVDQVINGE 120

Query: 120 EIDRWVEILDGDK 132
           E+D+WVEILD D+
Sbjct: 121 EVDQWVEILDNDR 133


>AT1G52570.1 | Symbols: PLDALPHA2 | phospholipase D alpha 2 |
           chr1:19583940-19586551 REVERSE LENGTH=810
          Length = 810

 Score =  189 bits (479), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 88/133 (66%), Positives = 106/133 (79%), Gaps = 1/133 (0%)

Query: 1   MAQILLHGTLHATVFEVDKLKS-GGGGNFLSKIKQNFEETVGFGKGVTKLYATVDLEKAR 59
           M + LLHG LHAT++EVD L + GG   FL  I  N EET+G GKG T+LYAT+DLEKAR
Sbjct: 1   MEECLLHGRLHATIYEVDHLHAEGGRSGFLGSILANVEETIGVGKGETQLYATIDLEKAR 60

Query: 60  VGRTRIIENEESNPRWYESFHIYCAHLASNIIFTVKDDNPIGATLIGRAYVPVEEVLDGE 119
           VGRTR I  E  NP+W+ESFHIYC H+A ++IFTVKD NPIGATLIGR Y+PVE++L GE
Sbjct: 61  VGRTRKITKEPKNPKWFESFHIYCGHMAKHVIFTVKDANPIGATLIGRGYIPVEDILHGE 120

Query: 120 EIDRWVEILDGDK 132
           E+DRWV+ILD +K
Sbjct: 121 EVDRWVDILDNEK 133


>AT5G25370.1 | Symbols: PLDALPHA3 | phospholipase D alpha 3 |
           chr5:8804240-8807547 REVERSE LENGTH=820
          Length = 820

 Score =  120 bits (300), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 62/143 (43%), Positives = 88/143 (61%), Gaps = 19/143 (13%)

Query: 3   QILLHGTLHATVFEVDKL-------------KSGGGGNFLSKIKQNFEETVGFGKGVTKL 49
           Q+LLHGTL   ++ +DKL             K   G    S+IK+  +       G   L
Sbjct: 4   QLLLHGTLEVKIYRIDKLHQRSRFNLCGKGNKEPTGKKTQSQIKRLTDSCTSLFGG--HL 61

Query: 50  YATVDLEKARVGRTRIIENEESNPRWYESFHIYCAHLASNIIFTVKDDNPIGATLIGRAY 109
           YAT+DL+++RV RT +      +P+W +SFH+Y AH  S IIFTVK+D P+ A+LIGRAY
Sbjct: 62  YATIDLDRSRVARTMM----RRHPKWLQSFHVYTAHSISKIIFTVKEDEPVSASLIGRAY 117

Query: 110 VPVEEVLDGEEIDRWVEILDGDK 132
           +PV EV+ G+ IDRW++ILD ++
Sbjct: 118 LPVTEVITGQPIDRWLDILDENR 140


>AT4G11850.1 | Symbols: PLDGAMMA1, MEE54 | phospholipase D gamma 1 |
           chr4:7129352-7132937 REVERSE LENGTH=858
          Length = 858

 Score = 67.4 bits (163), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 64/130 (49%), Gaps = 6/130 (4%)

Query: 5   LLHGTLHATVFEVDKLKSGGG-----GNFLSKIKQNFEETVGFGKGVTKLYATVDLEKAR 59
           LLHG L   V E   L +  G     G  LS + +   E     K  +  Y TV +  A 
Sbjct: 39  LLHGNLDIWVKEAKHLPNMDGFHNRLGGMLSGLGRKKVEGEKSSKITSDPYVTVSISGAV 98

Query: 60  VGRTRIIENEESNPRWYESFHIYCAHLASNIIFTVKDDNPIGATLIGRAYVPVEEVLDGE 119
           +GRT +I N E NP W + F +  AH A+ + F VKD + IG+ ++G   +P E++  G 
Sbjct: 99  IGRTFVISNSE-NPVWMQHFDVPVAHSAAEVHFVVKDSDIIGSQIMGAVGIPTEQLCSGN 157

Query: 120 EIDRWVEILD 129
            I+    IL+
Sbjct: 158 RIEGLFPILN 167


>AT4G11830.2 | Symbols: PLDGAMMA2 | phospholipase D gamma 2 |
           chr4:7115985-7119683 REVERSE LENGTH=856
          Length = 856

 Score = 66.6 bits (161), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 67/134 (50%), Gaps = 10/134 (7%)

Query: 5   LLHGTLHATVFEVDKLKSG-------GGGNFLSKIKQNFEETVG--FGKGVTKLYATVDL 55
           LLHG L   V E   L +         GG   S++ +   +  G    K  +  Y TV +
Sbjct: 33  LLHGNLDIWVKEAKHLPNMICYRNKLVGGISFSELGRRIRKVDGEKSSKFTSDPYVTVSI 92

Query: 56  EKARVGRTRIIENEESNPRWYESFHIYCAHLASNIIFTVKDDNPIGATLIGRAYVPVEEV 115
             A +GRT +I N E NP W + F +  AH A+ + F VKD++PIG+ +IG   +P +++
Sbjct: 93  SGAVIGRTFVISNSE-NPVWMQHFDVPVAHSAAEVHFVVKDNDPIGSKIIGVVGIPTKQL 151

Query: 116 LDGEEIDRWVEILD 129
             G  I+    IL+
Sbjct: 152 CSGNRIEGLFPILN 165


>AT2G42010.1 | Symbols: PLDBETA1, PLDBETA | phospholipase D beta 1 |
           chr2:17533018-17537990 REVERSE LENGTH=1083
          Length = 1083

 Score = 66.2 bits (160), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 7/133 (5%)

Query: 4   ILLHGTLHATVFEVDKLKSGGG-----GNFLSKIKQNFEETVGFGKGVTKLYATVDLEKA 58
           +LLHG L   ++    L +        G+   ++    E  +   K  +  Y +V +  A
Sbjct: 269 LLLHGNLDIWIYHAKNLPNMDMFHKTLGDMFGRLPGKIEGQLT-SKITSDPYVSVSVAGA 327

Query: 59  RVGRTRIIENEESNPRWYESFHIYCAHLASNIIFTVKDDNPIGATLIGRAYVPVEEVLDG 118
            +GRT ++ N E NP W + F++  AH A+ + F VKD + +G+ LIG   +PVE++  G
Sbjct: 328 VIGRTYVMSNSE-NPVWMQHFYVPVAHHAAEVHFVVKDSDVVGSQLIGLVTIPVEQIYSG 386

Query: 119 EEIDRWVEILDGD 131
            +I+    IL+ +
Sbjct: 387 AKIEGTYPILNSN 399


>AT4G35790.2 | Symbols: ATPLDDELTA, PLDDELTA | phospholipase D delta
           | chr4:16955774-16959875 REVERSE LENGTH=857
          Length = 857

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 1/79 (1%)

Query: 50  YATVDLEKARVGRTRIIENEESNPRWYESFHIYCAHLASNIIFTVKDDNPIGATLIGRAY 109
           Y TV + +A + RTR+++N +  P W E F+I  AH  + + F VKDD+  GA +IG A 
Sbjct: 80  YVTVVVPQATLARTRVLKNSQ-EPLWDEKFNISIAHPFAYLEFQVKDDDVFGAQIIGTAK 138

Query: 110 VPVEEVLDGEEIDRWVEIL 128
           +PV ++  GE I  W  +L
Sbjct: 139 IPVRDIASGERISGWFPVL 157


>AT4G35790.1 | Symbols: ATPLDDELTA, PLDDELTA | phospholipase D delta
           | chr4:16955774-16959875 REVERSE LENGTH=868
          Length = 868

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 1/79 (1%)

Query: 50  YATVDLEKARVGRTRIIENEESNPRWYESFHIYCAHLASNIIFTVKDDNPIGATLIGRAY 109
           Y TV + +A + RTR+++N +  P W E F+I  AH  + + F VKDD+  GA +IG A 
Sbjct: 80  YVTVVVPQATLARTRVLKNSQ-EPLWDEKFNISIAHPFAYLEFQVKDDDVFGAQIIGTAK 138

Query: 110 VPVEEVLDGEEIDRWVEIL 128
           +PV ++  GE I  W  +L
Sbjct: 139 IPVRDIASGERISGWFPVL 157


>AT4G35790.3 | Symbols: ATPLDDELTA, PLDDELTA | phospholipase D delta
           | chr4:16956681-16959875 REVERSE LENGTH=693
          Length = 693

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 1/79 (1%)

Query: 50  YATVDLEKARVGRTRIIENEESNPRWYESFHIYCAHLASNIIFTVKDDNPIGATLIGRAY 109
           Y TV + +A + RTR+++N +  P W E F+I  AH  + + F VKDD+  GA +IG A 
Sbjct: 80  YVTVVVPQATLARTRVLKNSQ-EPLWDEKFNISIAHPFAYLEFQVKDDDVFGAQIIGTAK 138

Query: 110 VPVEEVLDGEEIDRWVEIL 128
           +PV ++  GE I  W  +L
Sbjct: 139 IPVRDIASGERISGWFPVL 157


>AT4G11840.1 | Symbols: PLDGAMMA3 | phospholipase D gamma 3 |
           chr4:7122152-7125882 REVERSE LENGTH=866
          Length = 866

 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 5   LLHGTLHATVFEVDKLKSGGG-------GNFLSKIKQNFE-ETVGFGKGVTKLYATVDLE 56
           LLHG L   V E   L +  G       G F    ++N + +     K  +  Y TV + 
Sbjct: 43  LLHGNLDIWVKEAKHLPNMDGFHNTLVGGMFFGLGRRNHKVDGENSSKITSDPYVTVSIS 102

Query: 57  KARVGRTRIIENEESNPRWYESFHIYCAHLASNIIFTVKDDNPIGATLIGRAYVPVEEVL 116
            A +GRT +I N E NP W + F +  AH A+ + F VKD + IG+ +IG   +P E++ 
Sbjct: 103 GAVIGRTFVISNSE-NPVWMQHFDVPVAHSAAKVHFVVKDSDIIGSQIIGAVEIPTEQLC 161

Query: 117 DGEEIDRWVEILD 129
            G  I+    IL+
Sbjct: 162 SGNRIEGLFPILN 174


>AT4G11830.1 | Symbols: PLDGAMMA2 | phospholipase D gamma 2 |
           chr4:7115985-7119683 REVERSE LENGTH=824
          Length = 824

 Score = 64.7 bits (156), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 1/86 (1%)

Query: 44  KGVTKLYATVDLEKARVGRTRIIENEESNPRWYESFHIYCAHLASNIIFTVKDDNPIGAT 103
           K  +  Y TV +  A +GRT +I N E NP W + F +  AH A+ + F VKD++PIG+ 
Sbjct: 49  KFTSDPYVTVSISGAVIGRTFVISNSE-NPVWMQHFDVPVAHSAAEVHFVVKDNDPIGSK 107

Query: 104 LIGRAYVPVEEVLDGEEIDRWVEILD 129
           +IG   +P +++  G  I+    IL+
Sbjct: 108 IIGVVGIPTKQLCSGNRIEGLFPILN 133


>AT4G00240.1 | Symbols: PLDBETA2 | phospholipase D beta 2 |
           chr4:106380-110718 REVERSE LENGTH=927
          Length = 927

 Score = 62.8 bits (151), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 1/82 (1%)

Query: 50  YATVDLEKARVGRTRIIENEESNPRWYESFHIYCAHLASNIIFTVKDDNPIGATLIGRAY 109
           Y ++ +  A +GRT +I N E NP W + F++  AH A+ + F VKD + +G+ LIG   
Sbjct: 163 YVSISVAGAVIGRTYVISNSE-NPVWQQHFYVPVAHHAAEVHFVVKDSDAVGSQLIGIVT 221

Query: 110 VPVEEVLDGEEIDRWVEILDGD 131
           +PVE++  G  I+    I D +
Sbjct: 222 IPVEQIYSGARIEGTYSIRDSN 243