Miyakogusa Predicted Gene

Lj0g3v0244639.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0244639.1 tr|A5C017|A5C017_VITVI Phospholipase D OS=Vitis
vinifera GN=VITISV_017804 PE=3 SV=1,69.35,2e-19,PHOPHOLIPASE D
ALPHA,NULL; PHOSPHOLIPASE D,Phospholipase D family; PLDc,Phospholipase
D/Transphospha,NODE_15082_length_149_cov_1216.221436.path2.1
         (62 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G52570.1 | Symbols: PLDALPHA2 | phospholipase D alpha 2 | chr...   116   3e-27
AT3G15730.1 | Symbols: PLDALPHA1, PLD | phospholipase D alpha 1 ...   113   3e-26
AT5G25370.1 | Symbols: PLDALPHA3 | phospholipase D alpha 3 | chr...    86   4e-18
AT2G42010.1 | Symbols: PLDBETA1, PLDBETA | phospholipase D beta ...    64   2e-11
AT4G00240.1 | Symbols: PLDBETA2 | phospholipase D beta 2 | chr4:...    62   7e-11
AT4G11850.1 | Symbols: PLDGAMMA1, MEE54 | phospholipase D gamma ...    59   4e-10
AT4G11830.2 | Symbols: PLDGAMMA2 | phospholipase D gamma 2 | chr...    57   2e-09
AT4G11840.1 | Symbols: PLDGAMMA3 | phospholipase D gamma 3 | chr...    57   2e-09
AT4G11830.1 | Symbols: PLDGAMMA2 | phospholipase D gamma 2 | chr...    57   2e-09
AT4G35790.2 | Symbols: ATPLDDELTA, PLDDELTA | phospholipase D de...    55   9e-09
AT4G35790.3 | Symbols: ATPLDDELTA, PLDDELTA | phospholipase D de...    55   1e-08
AT4G35790.1 | Symbols: ATPLDDELTA, PLDDELTA | phospholipase D de...    49   9e-07

>AT1G52570.1 | Symbols: PLDALPHA2 | phospholipase D alpha 2 |
           chr1:19583940-19586551 REVERSE LENGTH=810
          Length = 810

 Score =  116 bits (290), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 51/59 (86%), Positives = 55/59 (93%)

Query: 1   MATHDEETAQFFEGTDVHCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDSDFPSGG 59
           MATHDEET  FF GTDV+C+LCPRNPDDGGSIVQ+LQISTMFTHHQKIVVVDS+ PSGG
Sbjct: 288 MATHDEETENFFRGTDVNCILCPRNPDDGGSIVQNLQISTMFTHHQKIVVVDSEMPSGG 346


>AT3G15730.1 | Symbols: PLDALPHA1, PLD | phospholipase D alpha 1 |
           chr3:5330835-5333474 FORWARD LENGTH=810
          Length = 810

 Score =  113 bits (282), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 50/59 (84%), Positives = 53/59 (89%)

Query: 1   MATHDEETAQFFEGTDVHCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDSDFPSGG 59
           MATHDEET  FF G+DVHC+LCPRNPDDGGSIVQ LQISTMFTHHQKIVVVDS+ PS G
Sbjct: 288 MATHDEETENFFRGSDVHCILCPRNPDDGGSIVQSLQISTMFTHHQKIVVVDSEMPSRG 346


>AT5G25370.1 | Symbols: PLDALPHA3 | phospholipase D alpha 3 |
           chr5:8804240-8807547 REVERSE LENGTH=820
          Length = 820

 Score = 86.3 bits (212), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/62 (61%), Positives = 47/62 (75%), Gaps = 1/62 (1%)

Query: 1   MATHDEETAQFFEGTDVHCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDSDFPSGGL 60
           M THD+ET  +F+ T V CVLCPRNPD+G SIVQ  +++TMFTHHQK +VVDS+   G L
Sbjct: 295 MMTHDQETYDYFKNTKVRCVLCPRNPDNGDSIVQGFEVATMFTHHQKTIVVDSEV-DGSL 353

Query: 61  DK 62
            K
Sbjct: 354 TK 355


>AT2G42010.1 | Symbols: PLDBETA1, PLDBETA | phospholipase D beta 1 |
           chr2:17533018-17537990 REVERSE LENGTH=1083
          Length = 1083

 Score = 63.9 bits (154), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/54 (51%), Positives = 39/54 (72%)

Query: 1   MATHDEETAQFFEGTDVHCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDSD 54
           MATHDEET +FF+ + V  +LCPRN     S V+  ++ T++THHQK V+VD+D
Sbjct: 556 MATHDEETRRFFKHSSVQVLLCPRNAGKRHSWVKQREVGTIYTHHQKNVIVDAD 609


>AT4G00240.1 | Symbols: PLDBETA2 | phospholipase D beta 2 |
           chr4:106380-110718 REVERSE LENGTH=927
          Length = 927

 Score = 62.0 bits (149), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 26/54 (48%), Positives = 38/54 (70%)

Query: 1   MATHDEETAQFFEGTDVHCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDSD 54
           M THDEET +FF+ + V  +LCPRN     S V+  ++ T++THHQK ++VD+D
Sbjct: 400 MGTHDEETRRFFKDSSVQVLLCPRNAGKRHSWVKQREVGTIYTHHQKNLIVDAD 453


>AT4G11850.1 | Symbols: PLDGAMMA1, MEE54 | phospholipase D gamma 1 |
           chr4:7129352-7132937 REVERSE LENGTH=858
          Length = 858

 Score = 59.3 bits (142), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/54 (44%), Positives = 38/54 (70%)

Query: 1   MATHDEETAQFFEGTDVHCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDSD 54
           M T DEET +FF+ + V  +LCPR+   G S ++  ++ T++THHQK V+VD++
Sbjct: 325 MNTSDEETRRFFKHSSVQVLLCPRSGGKGHSFIKKSEVGTIYTHHQKTVIVDAE 378


>AT4G11830.2 | Symbols: PLDGAMMA2 | phospholipase D gamma 2 |
           chr4:7115985-7119683 REVERSE LENGTH=856
          Length = 856

 Score = 57.4 bits (137), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/54 (42%), Positives = 37/54 (68%)

Query: 1   MATHDEETAQFFEGTDVHCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDSD 54
           M T DEET +FF+ + V  +LCPR    G S ++  ++ T++THHQK ++VD++
Sbjct: 323 MNTSDEETRRFFKHSSVQVLLCPRYGGKGHSFIKKSEVETIYTHHQKTMIVDAE 376


>AT4G11840.1 | Symbols: PLDGAMMA3 | phospholipase D gamma 3 |
           chr4:7122152-7125882 REVERSE LENGTH=866
          Length = 866

 Score = 57.4 bits (137), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/54 (42%), Positives = 37/54 (68%)

Query: 1   MATHDEETAQFFEGTDVHCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDSD 54
           M T DEET +FF+ + V  +LCPR    G S ++  ++ T++THHQK ++VD++
Sbjct: 332 MNTSDEETRRFFKHSSVQVLLCPRYGGKGHSFIKKSEVETIYTHHQKTMIVDAE 385


>AT4G11830.1 | Symbols: PLDGAMMA2 | phospholipase D gamma 2 |
           chr4:7115985-7119683 REVERSE LENGTH=824
          Length = 824

 Score = 57.0 bits (136), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/54 (42%), Positives = 37/54 (68%)

Query: 1   MATHDEETAQFFEGTDVHCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDSD 54
           M T DEET +FF+ + V  +LCPR    G S ++  ++ T++THHQK ++VD++
Sbjct: 291 MNTSDEETRRFFKHSSVQVLLCPRYGGKGHSFIKKSEVETIYTHHQKTMIVDAE 344


>AT4G35790.2 | Symbols: ATPLDDELTA, PLDDELTA | phospholipase D delta
           | chr4:16955774-16959875 REVERSE LENGTH=857
          Length = 857

 Score = 55.1 bits (131), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 34/53 (64%)

Query: 1   MATHDEETAQFFEGTDVHCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDS 53
           M THDEET +FF+ + V CVL PR       + +   + T+FTHHQK V+VD+
Sbjct: 318 MGTHDEETRKFFKHSSVICVLSPRYASSKLGLFKQQVVGTLFTHHQKCVLVDT 370


>AT4G35790.3 | Symbols: ATPLDDELTA, PLDDELTA | phospholipase D delta
           | chr4:16956681-16959875 REVERSE LENGTH=693
          Length = 693

 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 34/53 (64%)

Query: 1   MATHDEETAQFFEGTDVHCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDS 53
           M THDEET +FF+ + V CVL PR       + +   + T+FTHHQK V+VD+
Sbjct: 318 MGTHDEETRKFFKHSSVICVLSPRYASSKLGLFKQQVVGTLFTHHQKCVLVDT 370


>AT4G35790.1 | Symbols: ATPLDDELTA, PLDDELTA | phospholipase D delta
           | chr4:16955774-16959875 REVERSE LENGTH=868
          Length = 868

 Score = 48.5 bits (114), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 11/64 (17%)

Query: 1   MATHDEETAQFFEGTDVHCVLCPR-----------NPDDGGSIVQDLQISTMFTHHQKIV 49
           M THDEET +FF+ + V CVL PR                 SI     + T+FTHHQK V
Sbjct: 318 MGTHDEETRKFFKHSSVICVLSPRYASSKLGLFKQQASPSSSIYIMTVVGTLFTHHQKCV 377

Query: 50  VVDS 53
           +VD+
Sbjct: 378 LVDT 381