Miyakogusa Predicted Gene
- Lj0g3v0244519.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0244519.1 Non Chatacterized Hit- tr|I1ND38|I1ND38_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,30.81,5e-19,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; coiled-coil,NULL; SUBFAMILY NOT NAMED,,CUFF.15975.1
(230 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 116 2e-26
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 100 1e-21
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 1e-20
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 1e-20
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 2e-20
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 1e-19
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 4e-19
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 4e-19
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 7e-19
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 1e-18
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 3e-18
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 89 3e-18
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 4e-18
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 88 5e-18
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 5e-18
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 5e-18
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 6e-18
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 8e-18
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 87 8e-18
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 9e-18
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 3e-17
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 4e-17
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 5e-17
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 6e-17
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 7e-17
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 1e-16
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 1e-16
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 1e-16
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-16
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 3e-16
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 3e-16
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 3e-16
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 3e-16
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 4e-16
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 4e-16
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 5e-16
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 6e-16
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 6e-16
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 7e-16
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 7e-16
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 9e-16
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 1e-15
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 1e-15
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 1e-15
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 1e-15
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 1e-15
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 2e-15
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-15
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-15
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 3e-15
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 3e-15
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 3e-15
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 78 5e-15
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 1e-14
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 2e-14
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 2e-14
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 2e-14
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 76 2e-14
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 76 2e-14
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 3e-14
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 3e-14
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 3e-14
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 3e-14
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 3e-14
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 5e-14
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 5e-14
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 6e-14
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 7e-14
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 8e-14
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 9e-14
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 9e-14
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 9e-14
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 1e-13
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 1e-13
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-13
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 3e-13
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 3e-13
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 71 5e-13
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 9e-13
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 70 1e-12
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 69 2e-12
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 69 3e-12
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 69 3e-12
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 68 4e-12
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 5e-12
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 68 5e-12
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 5e-12
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 5e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 7e-12
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 9e-12
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 2e-11
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 2e-11
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 2e-11
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 2e-11
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 2e-11
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 2e-11
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 3e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 3e-11
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 4e-11
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 4e-11
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 4e-11
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 6e-11
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 7e-11
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 7e-11
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 8e-11
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 8e-11
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 8e-11
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 9e-11
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 1e-10
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-10
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 3e-10
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 5e-10
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 6e-10
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 6e-10
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 6e-10
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 6e-10
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 6e-10
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 8e-10
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 60 9e-10
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-09
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-09
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-09
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-09
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-09
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 6e-09
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 8e-09
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 9e-09
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 9e-09
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 9e-09
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 57 1e-08
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 57 1e-08
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 57 1e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 56 2e-08
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 3e-08
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 3e-08
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-08
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 4e-08
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 4e-08
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 4e-08
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 55 4e-08
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 5e-08
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 1e-07
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 3e-07
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 5e-07
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 6e-07
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 2e-06
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 2e-06
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 48 4e-06
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 48 4e-06
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 4e-06
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 48 5e-06
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 6e-06
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 8e-06
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 47 8e-06
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 9e-06
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 47 9e-06
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 113/229 (49%), Gaps = 27/229 (11%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFE-------------------SESALIVARC 54
F+++ + +SP +V YN IRGF AGN + + + LI C
Sbjct: 193 FKEMLESQVSP-NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
K +K+ + F L ++M KG+EPNL+S N VI GLC MNR+G + DE
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILR 174
TY +L + C +A + +EM+ GL+PSV+ Y L+ + C + + +A+ L
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMC--KAGNMNRAMEFLD 369
Query: 175 VMAKRGLSPDAVSYTTVISGFC---YLDEPELQWRSLQGTGRGLGPPIV 220
M RGL P+ +YTT++ GF Y++E R + G P +V
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN--GFSPSVV 416
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESES-------------------ALIV 51
K R + G+ P ++ YN I G G + S LI
Sbjct: 260 FKLLRSMALKGLEPNLIS-YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIK 318
Query: 52 ARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTP 111
CKE +A + M G+ P++++ ++I +C M +GL P
Sbjct: 319 GYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCP 378
Query: 112 DENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVG 171
+E TY +L + ++AY+VL EM G SPSVV YN L++ +CV ++E A+
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV--TGKMEDAIA 436
Query: 172 ILRVMAKRGLSPDAVSYTTVISGFC 196
+L M ++GLSPD VSY+TV+SGFC
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFC 461
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 106/226 (46%), Gaps = 25/226 (11%)
Query: 16 QIFRNGMSPPSVNIYNFRIRGFAGAGNFE-------------------SESALIVARCKE 56
++ R+G++P SV Y I AGN + + L+ ++
Sbjct: 335 EMLRHGLTP-SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQK 393
Query: 57 KKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTY 116
+ EA+ + + M D G P++V+ NA+I G C M KGL+PD +Y
Sbjct: 394 GYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSY 453
Query: 117 MSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVM 176
++ C + D+A +V EM+ +G+ P + Y+ L+ +C E+ R ++A + M
Sbjct: 454 STVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC--EQRRTKEACDLYEEM 511
Query: 177 AKRGLSPDAVSYTTVISGFCYLDEPE--LQWRSLQGTGRGLGPPIV 220
+ GL PD +YT +I+ +C + E LQ + + +G+ P +V
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHN-EMVEKGVLPDVV 556
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 19/184 (10%)
Query: 12 KTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTD 71
+ R++ NG SP SV YN ALI C K+ +A + + M +
Sbjct: 401 RVLREMNDNGFSP-SVVTYN----------------ALINGHCVTGKMEDAIAVLEDMKE 443
Query: 72 KGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADK 131
KG+ P++VS + V+ G C M KG+ PD TY SL Q C++ +
Sbjct: 444 KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503
Query: 132 AYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTV 191
A + EM+ GL P Y L++AYC+ +EKA+ + M ++G+ PD V+Y+ +
Sbjct: 504 ACDLYEEMLRVGLPPDEFTYTALINAYCM--EGDLEKALQLHNEMVEKGVLPDVVTYSVL 561
Query: 192 ISGF 195
I+G
Sbjct: 562 INGL 565
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 81/154 (52%), Gaps = 5/154 (3%)
Query: 45 SESALIVARCKEKK-VREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXX 103
S +A++ A + K+ + A ++K M + V PN+ + N +I+G C
Sbjct: 171 SYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDK 230
Query: 104 MNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGER 163
M KG P+ TY +L C + D +K+L M ++GL P+++ YN +++ C R
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC---R 287
Query: 164 E-RVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
E R+++ +L M +RG S D V+Y T+I G+C
Sbjct: 288 EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYC 321
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 80/201 (39%), Gaps = 34/201 (16%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMT 70
L+ R++ G+ P ++ Y+ I+GF C++++ +EA L++ M
Sbjct: 470 LRVKREMVEKGIKPDTIT-YSSLIQGF----------------CEQRRTKEACDLYEEML 512
Query: 71 DKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEAD 130
G+ P+ + A+I C M KG+ PD TY L L +
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTR 572
Query: 131 KAYKVLSEMIVRGLSPSVVIYN---------------KLVSAYCVGERERVEKAVGILRV 175
+A ++L ++ PS V Y+ L+ +C+ + + +A +
Sbjct: 573 EAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCM--KGMMTEADQVFES 630
Query: 176 MAKRGLSPDAVSYTTVISGFC 196
M + PD +Y +I G C
Sbjct: 631 MLGKNHKPDGTAYNIMIHGHC 651
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 89/191 (46%), Gaps = 21/191 (10%)
Query: 25 PSVNIYNFRIRGFAGAG-------------------NFESESALIVARCKEKKVREAFGL 65
P V YN I G G N + + LI CKE +V EA L
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387
Query: 66 WKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCD 125
+ +T KG+ P++ + N++IQGLC M KG PDE TY L LC
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCS 447
Query: 126 RCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDA 185
+ + D+A +L +M + G + SV+ YN L+ +C + R +A I M G+S ++
Sbjct: 448 KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR--EAEEIFDEMEVHGVSRNS 505
Query: 186 VSYTTVISGFC 196
V+Y T+I G C
Sbjct: 506 VTYNTLIDGLC 516
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
Query: 45 SESALIVARCKEKKVREAFGLWKAMTDK-GVEPNLVSSNAVIQGLCXXXXXXXXXXXXXX 103
S + ++ CKE +V +A + M+++ G P+ + N ++ GLC
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 104 MNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGER 163
M ++G PD TY S+ LC E +A +VL +MI R SP+ V YN L+S C +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLC--KE 378
Query: 164 ERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+VE+A + RV+ +G+ PD ++ ++I G C
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 9/183 (4%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
LI + C + K+ EA + K M G ++++ N +I G C M G
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEK 168
++ + TY +L LC + A +++ +MI+ G P YN L++ +C G ++K
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRG--GDIKK 558
Query: 169 AVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQ---WRSLQGTGRGLGP----PIVL 221
A I++ M G PD V+Y T+ISG C E+ RS+Q G L P P++
Sbjct: 559 AADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQ 618
Query: 222 KFF 224
F
Sbjct: 619 GLF 621
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 67/149 (44%), Gaps = 2/149 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ LI CK K REA ++ M GV N V+ N +I GLC M
Sbjct: 474 NTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM 533
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+G PD+ TY SL C + KA ++ M G P +V Y L+S C + RV
Sbjct: 534 EGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC--KAGRV 591
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGF 195
E A +LR + +G++ +Y VI G
Sbjct: 592 EVASKLLRSIQMKGINLTPHAYNPVIQGL 620
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 7/174 (4%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ L+ CK V+ A + M +G +P++ + N+VI GLC M
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT 358
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+ +P+ TY +L LC + ++A ++ + +G+ P V +N L+ C+ RV
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV 418
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC---YLDEP--ELQWRSLQGTGRGL 215
A+ + M +G PD +Y +I C LDE L+ L G R +
Sbjct: 419 --AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV 470
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 5/150 (3%)
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXM-NRKGLTPDE 113
+E + A + + M + G + VS N ++ G C M N+ G PD+
Sbjct: 236 EEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQ 295
Query: 114 NTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERERVEKAVGI 172
T+ +L LC A +++ M+ G P V YN ++S C +GE V++AV +
Sbjct: 296 YTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGE---VKEAVEV 352
Query: 173 LRVMAKRGLSPDAVSYTTVISGFCYLDEPE 202
L M R SP+ V+Y T+IS C ++ E
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVE 382
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
Query: 73 GVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKA 132
G++P++ + N +I+ LC M GL PDE T+ ++ Q + + D A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 133 YKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKR-GLSPDAVSYTTV 191
++ +M+ G S S V N +V +C + RVE A+ ++ M+ + G PD ++ T+
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFC--KEGRVEDALNFIQEMSNQDGFFPDQYTFNTL 301
Query: 192 ISGFC 196
++G C
Sbjct: 302 VNGLC 306
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 22/191 (11%)
Query: 26 SVNIYNFRIRGFAGAG-------------------NFESESALIVARCKEKKVREAFGLW 66
SV YN I GF A N + + LI CK ++V +A L
Sbjct: 469 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 528
Query: 67 KAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDR 126
M +G +P+ + N+++ C M G PD TY +L LC
Sbjct: 529 DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Query: 127 CEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLS-PDA 185
+ A K+L + ++G++ + YN ++ + + + +A+ + R M ++ + PDA
Sbjct: 589 GRVEVASKLLRSIQMKGINLTPHAYNPVIQG--LFRKRKTTEAINLFREMLEQNEAPPDA 646
Query: 186 VSYTTVISGFC 196
VSY V G C
Sbjct: 647 VSYRIVFRGLC 657
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 108 GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVE 167
GL PD + Y + LL D ++M V G+ P V +N L+ A C + R
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLR-- 206
Query: 168 KAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQ 204
A+ +L M GL PD ++TTV+ G Y++E +L
Sbjct: 207 PAILMLEDMPSYGLVPDEKTFTTVMQG--YIEEGDLD 241
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 2/159 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N S + +I C+ +++EA L M KG P+++S + V+ G C
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M RKGL P+ Y S+ LLC C+ +A + SEMI +G+ P V+Y L+ +C
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC-- 362
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDE 200
+R + A M R ++PD ++YT +ISGFC + +
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 23/229 (10%)
Query: 12 KTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESES-------------------ALIVA 52
+ F ++ R G+ P +V +Y I GF G+ + S A+I
Sbjct: 337 EAFSEMIRQGILPDTV-VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 53 RCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPD 112
C+ + EA L+ M KG+EP+ V+ +I G C M + G +P+
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 113 ENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGI 172
TY +L LC + D A ++L EM GL P++ YN +V+ C + +E+AV +
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC--KSGNIEEAVKL 513
Query: 173 LRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGT-GRGLGPPIV 220
+ GL+ D V+YTT++ +C E + L+ G+GL P IV
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 562
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 102/256 (39%), Gaps = 56/256 (21%)
Query: 12 KTFRQIFRNGMSPPSVNIYNFRIRGFAGAG-------------------NFESESALIVA 52
K F ++F G+ P SV I G+ AG N + + LI
Sbjct: 407 KLFHEMFCKGLEPDSVTFTEL-INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 53 RCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPD 112
CKE + A L M G++PN+ + N+++ GLC GL D
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 113 ENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCV------GE---- 162
TY +L C E DKA ++L EM+ +GL P++V +N L++ +C+ GE
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 163 -----------------------RERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCY-- 197
R ++ A I + M RG+ PD +Y ++ G C
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 645
Query: 198 -LDEPELQWRSLQGTG 212
+ E ++ ++G G
Sbjct: 646 NMKEAWFLFQEMKGKG 661
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 5/149 (3%)
Query: 48 ALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRK 107
L+ CK + EAF M +G+ P+ V +I G C M+ +
Sbjct: 324 GLLCRICKLAEAEEAFS---EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR 380
Query: 108 GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVE 167
+TPD TY ++ C + +A K+ EM +GL P V + +L++ YC + ++
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC--KAGHMK 438
Query: 168 KAVGILRVMAKRGLSPDAVSYTTVISGFC 196
A + M + G SP+ V+YTT+I G C
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 88/201 (43%), Gaps = 22/201 (10%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFE-------------------SESALIVARC 54
++++ G+ P ++ YN + G +GN E + + L+ A C
Sbjct: 479 LHEMWKIGLQP-NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
K ++ +A + K M KG++P +V+ N ++ G C M KG+ P+
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILR 174
T+ SL + C R A + +M RG+ P Y LV +C + +++A + +
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC--KARNMKEAWFLFQ 655
Query: 175 VMAKRGLSPDAVSYTTVISGF 195
M +G S +Y+ +I GF
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGF 676
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 4/140 (2%)
Query: 58 KVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYM 117
K A +++ + GV N+ S N VI +C M KG TPD +Y
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285
Query: 118 SLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERERVEKAVGILRVM 176
++ C E DK +K++ M +GL P+ IY ++ C + + E+A M
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA---FSEM 342
Query: 177 AKRGLSPDAVSYTTVISGFC 196
++G+ PD V YTT+I GFC
Sbjct: 343 IRQGILPDTVVYTTLIDGFC 362
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 2/159 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N S + +I C+ +++EA L M KG P+++S + V+ G C
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M RKGL P+ Y S+ LLC C+ +A + SEMI +G+ P V+Y L+ +C
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC-- 362
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDE 200
+R + A M R ++PD ++YT +ISGFC + +
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 23/229 (10%)
Query: 12 KTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESES-------------------ALIVA 52
+ F ++ R G+ P +V +Y I GF G+ + S A+I
Sbjct: 337 EAFSEMIRQGILPDTV-VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 53 RCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPD 112
C+ + EA L+ M KG+EP+ V+ +I G C M + G +P+
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 113 ENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGI 172
TY +L LC + D A ++L EM GL P++ YN +V+ C + +E+AV +
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC--KSGNIEEAVKL 513
Query: 173 LRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGT-GRGLGPPIV 220
+ GL+ D V+YTT++ +C E + L+ G+GL P IV
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 562
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 102/256 (39%), Gaps = 56/256 (21%)
Query: 12 KTFRQIFRNGMSPPSVNIYNFRIRGFAGAG-------------------NFESESALIVA 52
K F ++F G+ P SV I G+ AG N + + LI
Sbjct: 407 KLFHEMFCKGLEPDSVTFTEL-INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 53 RCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPD 112
CKE + A L M G++PN+ + N+++ GLC GL D
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 113 ENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCV------GE---- 162
TY +L C E DKA ++L EM+ +GL P++V +N L++ +C+ GE
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 163 -----------------------RERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCY-- 197
R ++ A I + M RG+ PD +Y ++ G C
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 645
Query: 198 -LDEPELQWRSLQGTG 212
+ E ++ ++G G
Sbjct: 646 NMKEAWFLFQEMKGKG 661
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 5/149 (3%)
Query: 48 ALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRK 107
L+ CK + EAF M +G+ P+ V +I G C M+ +
Sbjct: 324 GLLCRICKLAEAEEAFS---EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR 380
Query: 108 GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVE 167
+TPD TY ++ C + +A K+ EM +GL P V + +L++ YC + ++
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC--KAGHMK 438
Query: 168 KAVGILRVMAKRGLSPDAVSYTTVISGFC 196
A + M + G SP+ V+YTT+I G C
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 88/201 (43%), Gaps = 22/201 (10%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFE-------------------SESALIVARC 54
++++ G+ P ++ YN + G +GN E + + L+ A C
Sbjct: 479 LHEMWKIGLQP-NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
K ++ +A + K M KG++P +V+ N ++ G C M KG+ P+
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILR 174
T+ SL + C R A + +M RG+ P Y LV +C + +++A + +
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC--KARNMKEAWFLFQ 655
Query: 175 VMAKRGLSPDAVSYTTVISGF 195
M +G S +Y+ +I GF
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGF 676
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 4/140 (2%)
Query: 58 KVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYM 117
K A +++ + GV N+ S N VI +C M KG TPD +Y
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285
Query: 118 SLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERERVEKAVGILRVM 176
++ C E DK +K++ M +GL P+ IY ++ C + + E+A M
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA---FSEM 342
Query: 177 AKRGLSPDAVSYTTVISGFC 196
++G+ PD V YTT+I GFC
Sbjct: 343 IRQGILPDTVVYTTLIDGFC 362
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 80/150 (53%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ LI C +++ EA L+ M D P + + +I+ LC M
Sbjct: 292 THLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEE 351
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
G+ P+ +TY L LC +C+ +KA ++L +M+ +GL P+V+ YN L++ YC +R +
Sbjct: 352 TGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC--KRGMI 409
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
E AV ++ +M R LSP+ +Y +I G+C
Sbjct: 410 EDAVDVVELMESRKLSPNTRTYNELIKGYC 439
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 83/172 (48%), Gaps = 4/172 (2%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ LI + C ++ EA L K M + G++PN+ + +I LC M
Sbjct: 327 TVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLE 386
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
KGL P+ TY +L C R + A V+ M R LSP+ YN+L+ YC + V
Sbjct: 387 KGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC---KSNV 443
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQ-GTGRGLGP 217
KA+G+L M +R + PD V+Y ++I G C + +R L RGL P
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP 495
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 8/183 (4%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + + LI + C + K +A L M +KG+ PN+++ NA+I G C
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M + L+P+ TY L + C + KA VL++M+ R + P VV YN L+ C
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQC-- 473
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCY---LDEPELQWRSLQGTGRGLGPP 218
+ A +L +M RGL PD +YT++I C ++E + SL+ +G+ P
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLE--QKGVNPN 531
Query: 219 IVL 221
+V+
Sbjct: 532 VVM 534
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 23/200 (11%)
Query: 16 QIFRNGMSPPSVNIYNFRIRGFAGAG-------------------NFESESALIVARCKE 56
Q+ G+ P +V YN I G+ G N + + LI CK
Sbjct: 383 QMLEKGLMP-NVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK- 440
Query: 57 KKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTY 116
V +A G+ M ++ V P++V+ N++I G C MN +GL PD+ TY
Sbjct: 441 SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 500
Query: 117 MSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVM 176
S+ LC ++A + + +G++P+VV+Y L+ YC + +V++A +L M
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC--KAGKVDEAHLMLEKM 558
Query: 177 AKRGLSPDAVSYTTVISGFC 196
+ P+++++ +I G C
Sbjct: 559 LSKNCLPNSLTFNALIHGLC 578
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ALI CK KV EA + + M K PN ++ NA+I GLC M +
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK 595
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERE-R 165
GL P +T L L + D AY +M+ G P Y + YC RE R
Sbjct: 596 IGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC---REGR 652
Query: 166 VEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+ A ++ M + G+SPD +Y+++I G+
Sbjct: 653 LLDAEDMMAKMRENGVSPDLFTYSSLIKGY 682
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 81/191 (42%), Gaps = 21/191 (10%)
Query: 25 PSVNIYNFRIRGFAGAGNFESE-------------------SALIVARCKEKKVREAFGL 65
P V YN I G +GNF+S +++I + CK K+V EA L
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 66 WKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCD 125
+ ++ KGV PN+V A+I G C M K P+ T+ +L LC
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCA 579
Query: 126 RCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDA 185
+ +A + +M+ GL P+V L+ + + + A + M G PDA
Sbjct: 580 DGKLKEATLLEEKMVKIGLQPTVSTDTILIHR--LLKDGDFDHAYSRFQQMLSSGTKPDA 637
Query: 186 VSYTTVISGFC 196
+YTT I +C
Sbjct: 638 HTYTTFIQTYC 648
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 2/138 (1%)
Query: 59 VREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMS 118
V E ++ M + V PN+ + N ++ G C + GL PD TY S
Sbjct: 199 VDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTS 258
Query: 119 LFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAK 178
L C R + D A+KV +EM ++G + V Y L+ CV R+++A+ + M
Sbjct: 259 LIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA--RRIDEAMDLFVKMKD 316
Query: 179 RGLSPDAVSYTTVISGFC 196
P +YT +I C
Sbjct: 317 DECFPTVRTYTVLIKSLC 334
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 21/198 (10%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
P++ YN + G+ GN E + + K+ EA G++P+ + ++
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYV------SKIVEA----------GLDPDFFTYTSL 259
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
I G C M KG +E Y L LC D+A + +M
Sbjct: 260 IMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDEC 319
Query: 145 SPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQ 204
P+V Y L+ + C ER+ +A+ +++ M + G+ P+ +YT +I C + E +
Sbjct: 320 FPTVRTYTVLIKSLCGSERK--SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFE-K 376
Query: 205 WRSLQGT--GRGLGPPIV 220
R L G +GL P ++
Sbjct: 377 ARELLGQMLEKGLMPNVI 394
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 82/150 (54%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+A+I + CK K+V +AF +K + KG+ PN+V+ A++ GLC M +
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
K +TP+ TY +L + +A ++ EM+ + P +V Y+ L++ C+ +R+
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL--HDRI 311
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
++A + +M +G D VSY T+I+GFC
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFC 341
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 87/185 (47%), Gaps = 8/185 (4%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S+LI C ++ EA ++ M KG ++VS N +I G C M++
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+GL + TY +L Q + DKA + S+M G+SP + YN L+ C + +
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLC--DNGEL 416
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTG-RGLGPPIVLKFFF 225
EKA+ I M KR + D V+YTTVI G C + E W +GL P IV
Sbjct: 417 EKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIV----- 471
Query: 226 TSTTM 230
T TTM
Sbjct: 472 TYTTM 476
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 83/155 (53%), Gaps = 2/155 (1%)
Query: 48 ALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRK 107
+L+ C+ +V +A L M + G +P++V+ NA+I LC + RK
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219
Query: 108 GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVE 167
G+ P+ TY +L LC+ A ++LS+MI + ++P+V+ Y+ L+ A+ + +V
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV--KNGKVL 277
Query: 168 KAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPE 202
+A + M + + PD V+Y+++I+G C D +
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 45 SESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXM 104
S + LI CK K+V + L++ M+ +G+ N V+ N +IQG M
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Query: 105 NRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERE 164
+ G++PD TY L LCD E +KA + +M R + +V Y ++ C +
Sbjct: 392 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMC--KTG 449
Query: 165 RVEKAVGILRVMAKRGLSPDAVSYTTVISGFC---YLDEPELQWRSLQGTG 212
+VE+A + ++ +GL PD V+YTT++SG C L E E + ++ G
Sbjct: 450 KVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 2/148 (1%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
L+ A K KK L K M G+ +L + N VI C M + G
Sbjct: 91 LLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLG 150
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEK 168
PD T SL C R A ++ +M+ G P +V YN ++ + C + +RV
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC--KTKRVND 208
Query: 169 AVGILRVMAKRGLSPDAVSYTTVISGFC 196
A + + ++G+ P+ V+YT +++G C
Sbjct: 209 AFDFFKEIERKGIRPNVVTYTALVNGLC 236
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 2/138 (1%)
Query: 58 KVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYM 117
+V A + M G EP+ V+ +++ G C M G PD Y
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 194
Query: 118 SLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMA 177
++ LC + A+ E+ +G+ P+VV Y LV+ C R A +L M
Sbjct: 195 AIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC--NSSRWSDAARLLSDMI 252
Query: 178 KRGLSPDAVSYTTVISGF 195
K+ ++P+ ++Y+ ++ F
Sbjct: 253 KKKITPNVITYSALLDAF 270
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 69/149 (46%), Gaps = 17/149 (11%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMT 70
+K FR++ + G+ +V YN I+GF AG+ + K +E F M
Sbjct: 350 MKLFREMSQRGLVSNTVT-YNTLIQGFFQAGDVD-------------KAQEFFS---QMD 392
Query: 71 DKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEAD 130
G+ P++ + N ++ GLC M ++ + D TY ++ + +C + +
Sbjct: 393 FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVE 452
Query: 131 KAYKVLSEMIVRGLSPSVVIYNKLVSAYC 159
+A+ + + ++GL P +V Y ++S C
Sbjct: 453 EAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 88/185 (47%), Gaps = 8/185 (4%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S+L+ K K+ EA L K + D GV PNL NA+I LC M +
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK 395
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
GL P++ TY L + C R + D A L EM+ GL SV YN L++ +C + +
Sbjct: 396 IGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHC--KFGDI 453
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQG-TGRGLGPPIVLKFFF 225
A G + M + L P V+YT+++ G+C + R TG+G+ P I +
Sbjct: 454 SAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSI-----Y 508
Query: 226 TSTTM 230
T TT+
Sbjct: 509 TFTTL 513
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 9/178 (5%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+++I A+ K +EAFG+W M ++G PN V+ AVI GLC M
Sbjct: 686 TSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQP 745
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKV-LSEMIVRGLSPSVVIYNKLVSAYCVGERER 165
P++ TY +L + E D V L I++GL + YN L+ +C + R
Sbjct: 746 VSSVPNQVTYGCFLDIL-TKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFC--RQGR 802
Query: 166 VEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQ---WRSLQGTGRGLGPPIV 220
+E+A ++ M G+SPD ++YTT+I+ C ++ + W S+ T +G+ P V
Sbjct: 803 IEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSM--TEKGIRPDRV 858
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ LI CK++KV EA G+ K + K ++P++V+ ++ GLC M
Sbjct: 266 NVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLC 325
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+P E SL + L R + ++A ++ ++ G+SP++ +YN L+ + C G +
Sbjct: 326 LRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKG--RKF 383
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+A + M K GL P+ V+Y+ +I FC
Sbjct: 384 HEAELLFDRMGKIGLRPNDVTYSILIDMFC 413
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
++LI CK + A G M +K +EP +V+ +++ G C M
Sbjct: 441 NSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 500
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
KG+ P T+ +L L A K+ +EM + P+ V YN ++ YC E +
Sbjct: 501 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYC--EEGDM 558
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
KA L+ M ++G+ PD SY +I G C
Sbjct: 559 SKAFEFLKEMTEKGIVPDTYSYRPLIHGLC 588
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 79/156 (50%), Gaps = 3/156 (1%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDK-GVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRK 107
LI + ++V + ++K M K + P + + +A++ GL M
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSV 221
Query: 108 GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVE 167
G+ PD Y + + LC+ + +A ++++ M G ++V YN L+ C ++++V
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLC--KKQKVW 279
Query: 168 KAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPEL 203
+AVGI + +A + L PD V+Y T++ G C + E E+
Sbjct: 280 EAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEI 315
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 7/166 (4%)
Query: 59 VREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMS 118
+R+A L+ M + V+PN V+ N +I+G C M KG+ PD +Y
Sbjct: 523 IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRP 582
Query: 119 LFQLLCDRCEADKAYKVLSEMIVRG-LSPSVVIYNKLVSAYCVGERE-RVEKAVGILRVM 176
L LC +A +A KV + + +G + + Y L+ +C RE ++E+A+ + + M
Sbjct: 583 LIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGLLHGFC---REGKLEEALSVCQEM 638
Query: 177 AKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQG-TGRGLGPPIVL 221
+RG+ D V Y +I G + +L + L+ RGL P V+
Sbjct: 639 VQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI 684
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ +I + C+ K + A + M G + N+V N +I GLC +
Sbjct: 231 TGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAG 290
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
K L PD TY +L LC E + +++ EM+ SPS + LV + +R ++
Sbjct: 291 KDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEG--LRKRGKI 348
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
E+A+ +++ + G+SP+ Y +I C
Sbjct: 349 EEALNLVKRVVDFGVSPNLFVYNALIDSLC 378
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 5/139 (3%)
Query: 56 EKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENT 115
E +++A L A+ KG+ N + N +I+G C M G++PD T
Sbjct: 766 EVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCIT 824
Query: 116 YMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCV-GERERVEKAVGILR 174
Y ++ LC R + KA ++ + M +G+ P V YN L+ CV GE + KA +
Sbjct: 825 YTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGE---MGKATELRN 881
Query: 175 VMAKRGLSPDAVSYTTVIS 193
M ++GL P+ + T S
Sbjct: 882 EMLRQGLIPNNKTSRTTTS 900
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 43/105 (40%), Gaps = 19/105 (18%)
Query: 30 YNFRIRGFAGAGNFESESALIV-------------------ARCKEKKVREAFGLWKAMT 70
YN IRGF G E S LI C+ V++A LW +MT
Sbjct: 790 YNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMT 849
Query: 71 DKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENT 115
+KG+ P+ V+ N +I G C M R+GL P+ T
Sbjct: 850 EKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 2/122 (1%)
Query: 26 SVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVI 85
+V ++N ++G N + + LI C++ ++ EA L M GV P+ ++ +I
Sbjct: 772 AVELHNAILKGLLA--NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMI 829
Query: 86 QGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLS 145
LC M KG+ PD Y +L C E KA ++ +EM+ +GL
Sbjct: 830 NELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLI 889
Query: 146 PS 147
P+
Sbjct: 890 PN 891
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 71/184 (38%), Gaps = 35/184 (19%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ L+ C+E K+ EA + + M +GV+ +LV +I G M+
Sbjct: 616 TGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHD 675
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC----VGE 162
+GL PD+ Y S+ + +A+ + MI G P+ V Y +++ C V E
Sbjct: 676 RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNE 735
Query: 163 RE------------------------------RVEKAVGILRVMAKRGLSPDAVSYTTVI 192
E ++KAV + + K GL + +Y +I
Sbjct: 736 AEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLI 794
Query: 193 SGFC 196
GFC
Sbjct: 795 RGFC 798
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 85/188 (45%), Gaps = 20/188 (10%)
Query: 9 ATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKA 68
A K F+++ +NG V S + LI + KK+ EA L
Sbjct: 208 AAFKVFKEMTQNGCHRNEV-----------------SYTQLIYGLFEAKKIDEALSLLVK 250
Query: 69 MTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCE 128
M D PN+ + +I LC M+ G+ PD+ Y L Q C
Sbjct: 251 MKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDT 310
Query: 129 ADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSY 188
D+A +L M+ GL P+V+ YN L+ +C ++ V KA+G+L M ++ L PD ++Y
Sbjct: 311 LDEASGLLEHMLENGLMPNVITYNALIKGFC---KKNVHKAMGLLSKMLEQNLVPDLITY 367
Query: 189 TTVISGFC 196
T+I+G C
Sbjct: 368 NTLIAGQC 375
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 59 VREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMS 118
V E L+ M + V P++ + N ++ G C + + G PD TY S
Sbjct: 136 VEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTS 195
Query: 119 LFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAK 178
C R E D A+KV EM G + V Y +L+ Y + E +++++A+ +L M
Sbjct: 196 FITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLI--YGLFEAKKIDEALSLLVKMKD 253
Query: 179 RGLSPDAVSYTTVISGFC 196
P+ +YT +I C
Sbjct: 254 DNCCPNVRTYTVLIDALC 271
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ LI + C + EA GL + M + G+ PN+++ NA+I+G C M
Sbjct: 299 TVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAMGLLSK-MLE 357
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPS 147
+ L PD TY +L C D AY++LS M GL P+
Sbjct: 358 QNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 6/205 (2%)
Query: 17 IFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEP 76
+F+NG+ +Y +++ N + + ++ CK+ + ++AF ++ M ++GV
Sbjct: 243 LFKNGVKKQGFEMYE-KMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSC 301
Query: 77 NLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVL 136
N+V+ N +I GLC M G+ P+ TY +L C + KA +
Sbjct: 302 NIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLC 361
Query: 137 SEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
++ RGLSPS+V YN LVS +C + A +++ M +RG+ P V+YT +I F
Sbjct: 362 RDLKSRGLSPSLVTYNILVSGFC--RKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFA 419
Query: 197 YLD--EPELQWRSLQGTGRGLGPPI 219
D E +Q R L GL P +
Sbjct: 420 RSDNMEKAIQLR-LSMEELGLVPDV 443
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 4/166 (2%)
Query: 32 FRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXX 91
F + N + + LI K ++ F +++ M + GV PNL + N V+ LC
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 92 XXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIY 151
M +G++ + TY +L LC + ++A KV+ +M G++P+++ Y
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 152 NKLVSAYC-VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
N L+ +C VG ++ KA+ + R + RGLSP V+Y ++SGFC
Sbjct: 342 NTLIDGFCGVG---KLGKALSLCRDLKSRGLSPSLVTYNILVSGFC 384
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 19/185 (10%)
Query: 12 KTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTD 71
K Q+ +G++P + YN I GF G G K+ +A L + +
Sbjct: 324 KVVDQMKSDGINPNLIT-YNTLIDGFCGVG----------------KLGKALSLCRDLKS 366
Query: 72 KGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADK 131
+G+ P+LV+ N ++ G C M +G+ P + TY L +K
Sbjct: 367 RGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEK 426
Query: 132 AYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTV 191
A ++ M GL P V Y+ L+ +C+ + ++ +A + + M ++ P+ V Y T+
Sbjct: 427 AIQLRLSMEELGLVPDVHTYSVLIHGFCI--KGQMNEASRLFKSMVEKNCEPNEVIYNTM 484
Query: 192 ISGFC 196
I G+C
Sbjct: 485 ILGYC 489
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 110/268 (41%), Gaps = 63/268 (23%)
Query: 10 TLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNF--------ESESA----------LIV 51
++ F ++ NG P S N +N+ + G+ +F E++S LI
Sbjct: 113 SISYFNEMVDNGFVPGS-NCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIK 171
Query: 52 ARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTP 111
C+ ++ ++F L +T+ G PN+V +I G C M + GL
Sbjct: 172 GCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVA 231
Query: 112 DENTYMSL-------------FQL----------------------LCDRCEADKAYKVL 136
+E TY L F++ LC A++V
Sbjct: 232 NERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVF 291
Query: 137 SEMIVRGLSPSVVIYNKLVSAYCVGERE-RVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
EM RG+S ++V YN L+ C RE ++ +A ++ M G++P+ ++Y T+I GF
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLC---REMKLNEANKVVDQMKSDGINPNLITYNTLIDGF 348
Query: 196 C---YLDEPELQWRSLQGTGRGLGPPIV 220
C L + R L+ RGL P +V
Sbjct: 349 CGVGKLGKALSLCRDLK--SRGLSPSLV 374
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 20/164 (12%)
Query: 6 SSTATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFE-------------------SE 46
++ K +++ G+ P V Y I FA + N E +
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVT-YTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTY 446
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S LI C + ++ EA L+K+M +K EPN V N +I G C M
Sbjct: 447 SVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEE 506
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVI 150
K L P+ +Y + ++LC ++ +A +++ +MI G+ PS I
Sbjct: 507 KELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSI 550
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 27/200 (13%)
Query: 15 RQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVR-------------- 60
R + G+SP V YN + GF G+ S +A +V +E+ ++
Sbjct: 362 RDLKSRGLSPSLVT-YNILVSGFCRKGD-TSGAAKMVKEMEERGIKPSKVTYTILIDTFA 419
Query: 61 ------EAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
+A L +M + G+ P++ + + +I G C M K P+E
Sbjct: 420 RSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEV 479
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEK-AVGIL 173
Y ++ C + +A K+L EM + L+P+V Y ++ C +ER K A ++
Sbjct: 480 IYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLC---KERKSKEAERLV 536
Query: 174 RVMAKRGLSPDAVSYTTVIS 193
M G+ P + S ++IS
Sbjct: 537 EKMIDSGIDP-STSILSLIS 555
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 97/198 (48%), Gaps = 5/198 (2%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
P V++Y + + N + AL+ CK +V EA L AM+ +G EPN + +A+
Sbjct: 621 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 680
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
I GLC M+ G TY SL D A KVLS+M+
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740
Query: 145 SPSVVIYNKLVSAYC-VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPEL 203
+P+VVIY +++ C VG + ++A ++++M ++G P+ V+YT +I GF + + E
Sbjct: 741 APNVVIYTEMIDGLCKVG---KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIET 797
Query: 204 QWRSLQGTG-RGLGPPIV 220
L+ G +G+ P V
Sbjct: 798 CLELLERMGSKGVAPNYV 815
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 3/197 (1%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
P++ Y+ I G AG E + C K V + +K D PN+V+ A+
Sbjct: 586 PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGAL 645
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
+ G C M+ +G P++ Y +L LC + D+A +V +EM G
Sbjct: 646 LDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 705
Query: 145 SPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQ 204
++ Y+ L+ Y +R+ + A +L M + +P+ V YT +I G C + + +
Sbjct: 706 PATLYTYSSLIDRYFKVKRQDL--ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEA 763
Query: 205 WRSLQ-GTGRGLGPPIV 220
++ +Q +G P +V
Sbjct: 764 YKLMQMMEEKGCQPNVV 780
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 2/143 (1%)
Query: 54 CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDE 113
C K +AF + + M +G P+ + + V+ LC M R GL D
Sbjct: 459 CSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADV 518
Query: 114 NTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGIL 173
TY + C ++A K +EM G +P+VV Y L+ AY + ++V A +
Sbjct: 519 YTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL--KAKKVSYANELF 576
Query: 174 RVMAKRGLSPDAVSYTTVISGFC 196
M G P+ V+Y+ +I G C
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHC 599
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 70/164 (42%), Gaps = 24/164 (14%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + +ALI A K KKV A L++ M +G PN+V+ +A+I G C
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 611
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M PD + Y K Y SE P+VV Y L+ +C
Sbjct: 612 ERMCGSKDVPDVDMYF-------------KQYDDNSE------RPNVVTYGALLDGFC-- 650
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC---YLDEPE 202
+ RVE+A +L M+ G P+ + Y +I G C LDE +
Sbjct: 651 KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 694
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 82/214 (38%), Gaps = 31/214 (14%)
Query: 2 SMRLSSTATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESAL------------ 49
S+ L LK FR FR PS + YN I+ F A +S S +
Sbjct: 217 SIALEELGRLKDFR--FR-----PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMD 269
Query: 50 -------IVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXX 102
+ CK K REA L + + P+ V +I GLC
Sbjct: 270 GFTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLN 326
Query: 103 XMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGE 162
M P+ TY +L ++ + + +VL+ M++ G PS I+N LV AYC
Sbjct: 327 RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 386
Query: 163 RERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
A +L+ M K G P V Y +I C
Sbjct: 387 DHSY--AYKLLKKMVKCGHMPGYVVYNILIGSIC 418
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 4/163 (2%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ +I CK K EA+ L + M +KG +PN+V+ A+I G M
Sbjct: 748 TEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGS 807
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
KG+ P+ TY L C D A+ +L EM Y K++ + +E +
Sbjct: 808 KGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF---NKEFI 864
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQ 209
E ++G+L + + +P Y +I E+ R L+
Sbjct: 865 E-SLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLE 906
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 74/208 (35%), Gaps = 41/208 (19%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ LI C+ EA M PN+V+ + ++ G M
Sbjct: 306 TKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMM 365
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERE-- 164
+G P + SL C + AYK+L +M+ G P V+YN L+ + C G+++
Sbjct: 366 EGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC-GDKDSL 424
Query: 165 --------------------------------------RVEKAVGILRVMAKRGLSPDAV 186
+ EKA ++R M +G PD
Sbjct: 425 NCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTS 484
Query: 187 SYTTVISGFCYLDEPELQWRSLQGTGRG 214
+Y+ V++ C + EL + + RG
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRG 512
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 13/184 (7%)
Query: 12 KTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTD 71
K +++ + G P V +YN I G + + L +A EK E M
Sbjct: 393 KLLKKMVKCGHMPGYV-VYNILIGSICGDKDSLNCDLLDLA---EKAYSE-------MLA 441
Query: 72 KGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADK 131
GV N ++ ++ + LC M +G PD +TY + LC+ + +
Sbjct: 442 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMEL 501
Query: 132 AYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTV 191
A+ + EM GL V Y +V ++C + +E+A M + G +P+ V+YT +
Sbjct: 502 AFLLFEEMKRGGLVADVYTYTIMVDSFC--KAGLIEQARKWFNEMREVGCTPNVVTYTAL 559
Query: 192 ISGF 195
I +
Sbjct: 560 IHAY 563
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 77/146 (52%), Gaps = 2/146 (1%)
Query: 54 CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDE 113
CK + A L K M +E ++V N +I GLC M+ KG+ PD
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 114 NTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGIL 173
TY SL LC+ A ++LS+MI R ++P+VV ++ L+ A+ V E + VE A +
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF-VKEGKLVE-AEKLY 351
Query: 174 RVMAKRGLSPDAVSYTTVISGFCYLD 199
M KR + PD +Y+++I+GFC D
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHD 377
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 77/150 (51%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ +I CK K + +A L+ M +KG+ P++ + +++I LC M
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+ + P+ T+ +L + +A K+ EMI R + P + Y+ L++ +C+ +R+
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM--HDRL 379
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
++A + +M + P+ V+Y+T+I GFC
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFC 409
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 2/149 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S+LI C + +A L M ++ + PN+V+ +A+I M +
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+ + PD TY SL C D+A + MI + P+VV Y+ L+ +C + +RV
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC--KAKRV 414
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGF 195
E+ + + R M++RGL + V+YTT+I GF
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 81/175 (46%), Gaps = 3/175 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S+LI C ++ EA +++ M K PN+V+ + +I+G C M++
Sbjct: 367 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQ 426
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+GL + TY +L + D A V +M+ G+ P+++ YN L+ C + ++
Sbjct: 427 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC--KNGKL 484
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTG-RGLGPPIV 220
KA+ + + + + PD +Y +I G C + E W +G+ P ++
Sbjct: 485 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 87/187 (46%), Gaps = 21/187 (11%)
Query: 25 PSVNIYNFRIRGFAGA-------------------GNFESESALIVARCKEKKVREAFGL 65
P+V Y+ I+GF A GN + + LI + + A +
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 66 WKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCD 125
+K M GV PN+++ N ++ GLC + R + PD TY + + +C
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Query: 126 RCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDA 185
+ + +++ + ++G+SP+V+ YN ++S +C + E+A +L+ M + G P++
Sbjct: 516 AGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFC--RKGSKEEADSLLKKMKEDGPLPNS 573
Query: 186 VSYTTVI 192
+Y T+I
Sbjct: 574 GTYNTLI 580
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 12/192 (6%)
Query: 5 LSSTATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFG 64
LS+ A + F + G ++ I + + + S I C+ ++ A
Sbjct: 90 LSAVAKMNKFELVISLGEQMQTLGI----------SHDLYTYSIFINCFCRRSQLSLALA 139
Query: 65 LWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLC 124
+ M G EP++V+ ++++ G C M G PD T+ +L L
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 125 DRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPD 184
+A +A ++ +M+ RG P +V Y +V+ C +R ++ A+ +L+ M K + D
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC--KRGDIDLALSLLKKMEKGKIEAD 257
Query: 185 AVSYTTVISGFC 196
V Y T+I G C
Sbjct: 258 VVIYNTIIDGLC 269
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 2/155 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + S LI CK K+V E L++ M+ +G+ N V+ +I G
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M G+ P+ TY L LC + KA V + + P + YN ++ C
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC-- 514
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+ +VE + ++ +G+SP+ ++Y T+ISGFC
Sbjct: 515 KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFC 549
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 2/155 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + SALI A KE K+ EA L+ M + ++P++ + +++I G C
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M K P+ TY +L + C ++ ++ EM RGL + V Y L+ +
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFF-- 444
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+ + A + + M G+ P+ ++Y ++ G C
Sbjct: 445 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 3/164 (1%)
Query: 58 KVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYM 117
KV +A L+ M P++V N ++ + M G++ D TY
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 118 SLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMA 177
C R + A VL++M+ G P +V + L++ YC +R+ AV ++ M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYC--HSKRISDAVALVDQMV 180
Query: 178 KRGLSPDAVSYTTVISG-FCYLDEPELQWRSLQGTGRGLGPPIV 220
+ G PD ++TT+I G F + E Q RG P +V
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV 224
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 12/208 (5%)
Query: 14 FRQIFRNGMSP-----PSVNIYN--FRIRGFAGAGNFESESALIVARCKEKKVREAFGLW 66
+R+I RN +S +V+++ + R F F + L+ A K K L
Sbjct: 50 YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEF---NKLLSAVAKMNKFELVISLG 106
Query: 67 KAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDR 126
+ M G+ +L + + I C M + G PD T SL C
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 127 CEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAV 186
A ++ +M+ G P + L+ + + +AV ++ M +RG PD V
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL--HNKASEAVALVDQMVQRGCQPDLV 224
Query: 187 SYTTVISGFCYLDEPELQWRSLQGTGRG 214
+Y TV++G C + +L L+ +G
Sbjct: 225 TYGTVVNGLCKRGDIDLALSLLKKMEKG 252
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 21 GMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVS 80
G P V IYN I G CK K + +A L+K M KG+ PN+V+
Sbjct: 250 GKLEPGVLIYNTIIDGL----------------CKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 81 SNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMI 140
+++I LC M + + PD T+ +L + +A K+ EM+
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 141 VRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
R + PS+V Y+ L++ +C+ +R+++A + M + PD V+Y T+I GFC
Sbjct: 354 KRSIDPSIVTYSSLINGFCM--HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 407
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 96/218 (44%), Gaps = 26/218 (11%)
Query: 2 SMRLSSTATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVAR-------- 53
S R+S L Q+F G P +V +N I G N SE+ ++ R
Sbjct: 164 SKRISEAVAL--VDQMFVTGYQPNTVT-FNTLIHGLF-LHNKASEAMALIDRMVAKGCQP 219
Query: 54 ------------CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
CK AF L M +EP ++ N +I GLC
Sbjct: 220 DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 279
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M KG+ P+ TY SL LC+ A ++LS+MI R ++P V ++ L+ A+ V
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF-VK 338
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLD 199
E + VE A + M KR + P V+Y+++I+GFC D
Sbjct: 339 EGKLVE-AEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 18/172 (10%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
P V YN I+GF CK K+V E +++ M+ +G+ N V+ N +
Sbjct: 394 PDVVTYNTLIKGF----------------CKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
IQGL M G+ P+ TY +L LC + +KA V + +
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 145 SPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
P++ YN ++ C + +VE + ++ +G+ PD V+Y T+ISGFC
Sbjct: 498 EPTIYTYNIMIEGMC--KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 3/175 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S+LI C ++ EA +++ M K P++V+ N +I+G C M++
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 424
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+GL + TY L Q L + D A ++ EM+ G+ P+++ YN L+ C + ++
Sbjct: 425 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC--KNGKL 482
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTG-RGLGPPIV 220
EKA+ + + + + P +Y +I G C + E W +G+ P +V
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 537
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
SALI A KE K+ EA L+ M + ++P++V+ +++I G C M
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 389
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
K PD TY +L + C ++ +V EM RGL + V YN L+ + +
Sbjct: 390 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG--LFQAGDC 447
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+ A I + M G+ P+ ++Y T++ G C
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 83/182 (45%), Gaps = 19/182 (10%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMT 70
++ FR++ + G+ +V YN I+G AG+ + A ++K M
Sbjct: 416 MEVFREMSQRGLVGNTVT-YNILIQGLFQAGDCDM----------------AQEIFKEMV 458
Query: 71 DKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEAD 130
GV PN+++ N ++ GLC + R + P TY + + +C + +
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Query: 131 KAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTT 190
+ + + ++G+ P VV YN ++S +C + E+A + + M + G P++ Y T
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFC--RKGSKEEADALFKEMKEDGTLPNSGCYNT 576
Query: 191 VI 192
+I
Sbjct: 577 LI 578
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 3/196 (1%)
Query: 1 MSMRLSSTATLKTFRQ-IFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKV 59
+S ++STA R + R + S + F R F+G +++ L E K+
Sbjct: 3 ISFAIASTAKRFVHRSLVVRGNAATVSPSFSFFWRRAFSGKTSYDYREKLSRNGLSELKL 62
Query: 60 REAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSL 119
+A L+ M P+++ + ++ + M G+ + TY L
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 120 FQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKR 179
C R + A VL +M+ G P++V + L++ YC +R+ +AV ++ M
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYC--HSKRISEAVALVDQMFVT 180
Query: 180 GLSPDAVSYTTVISGF 195
G P+ V++ T+I G
Sbjct: 181 GYQPNTVTFNTLIHGL 196
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 2/177 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S L+ A K K L + M + G+ N + + +I C M +
Sbjct: 85 SKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMK 144
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
G P+ T SL C +A ++ +M V G P+ V +N L+ + +
Sbjct: 145 LGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL--HNKA 202
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTGRGLGPPIVLKF 223
+A+ ++ M +G PD V+Y V++G C + +L + L +G P VL +
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY 259
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 80/150 (53%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S +I + CK + V +A L+ M +KG+ P++ + +++I LC M
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+ + P+ T+ SL + +A K+ EMI R + P++V YN L++ +C+ +R+
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM--HDRL 361
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
++A I +M + PD V+Y T+I+GFC
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 48 ALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRK 107
A+I CK + A L M +E ++V + VI LC M+ K
Sbjct: 210 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK 269
Query: 108 GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVE 167
G+ PD TY SL LC+ A ++LS+M+ R ++P+VV +N L+ A+ + ++
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAF--AKEGKLI 327
Query: 168 KAVGILRVMAKRGLSPDAVSYTTVISGFCYLD 199
+A + M +R + P+ V+Y ++I+GFC D
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 22/216 (10%)
Query: 25 PSVNIYNFRIRGFAGAG-------------------NFESESALIVARCKEKKVREAFGL 65
P+V +N I FA G N + ++LI C ++ EA +
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 66 WKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCD 125
+ M K P++V+ N +I G C M+R+GL + TY +L
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 126 RCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDA 185
+ D A V +M+ G+ P+++ YN L+ C + ++EKA+ + + K + PD
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC--KNGKLEKAMVVFEYLQKSKMEPDI 485
Query: 186 VSYTTVISGFCYLDEPELQWRSLQGTG-RGLGPPIV 220
+Y + G C + E W +G+ P ++
Sbjct: 486 YTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 521
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 2/149 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S+LI C + +A L M ++ + PN+V+ N++I M +
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+ + P+ TY SL C D+A ++ + M+ + P VV YN L++ +C + ++V
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC--KAKKV 396
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+ + R M++RGL + V+YTT+I GF
Sbjct: 397 VDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 83/196 (42%), Gaps = 20/196 (10%)
Query: 5 LSSTATLKTFRQIFRNG----MSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVR 60
LS+ A +K F + G + S N+Y + I +I C+ ++
Sbjct: 72 LSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI--------------MINCLCRRSQLS 117
Query: 61 EAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLF 120
A + M G P++V+ N+++ G C M G PD T+ +L
Sbjct: 118 FALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLV 177
Query: 121 QLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRG 180
L +A +A ++ M+V+G P +V Y +++ C +R + A+ +L M K
Sbjct: 178 HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC--KRGEPDLALNLLNKMEKGK 235
Query: 181 LSPDAVSYTTVISGFC 196
+ D V Y+TVI C
Sbjct: 236 IEADVVIYSTVIDSLC 251
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 68/168 (40%), Gaps = 2/168 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S L+ A K KK + M GV NL + N +I LC M +
Sbjct: 69 SKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMK 128
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
G P T SL C +A ++ +M+ G P V + LV + + +
Sbjct: 129 LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG--LFQHNKA 186
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTGRG 214
+AV ++ M +G PD V+Y VI+G C EP+L L +G
Sbjct: 187 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG 234
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 2/138 (1%)
Query: 58 KVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYM 117
K+ EA L+ M P++V + ++ + M G++ + TY
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 118 SLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMA 177
+ LC R + A +L +M+ G PS+V N L++ +C G R+ +AV ++ M
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHG--NRISEAVALVDQMV 162
Query: 178 KRGLSPDAVSYTTVISGF 195
+ G PD V++TT++ G
Sbjct: 163 EMGYQPDTVTFTTLVHGL 180
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 69/167 (41%), Gaps = 20/167 (11%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAG-------------------NFESESALIV 51
++ FR + R G+ +V Y I GF A N + + L+
Sbjct: 400 MELFRDMSRRGLVGNTVT-YTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458
Query: 52 ARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTP 111
CK K+ +A +++ + +EP++ + N + +G+C ++ KG+ P
Sbjct: 459 GLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP 518
Query: 112 DENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAY 158
D Y ++ C + ++AY + +M G P YN L+ A+
Sbjct: 519 DVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAH 565
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 2/155 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N S + L+ A C + A+ L+ M ++ V P++ S +IQG C
Sbjct: 189 NTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELL 248
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M KG PD +Y +L LC + + +AYK+L M ++G +P +V YN ++ +C
Sbjct: 249 DDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFC-- 306
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+R A +L M G SP++VSY T+I G C
Sbjct: 307 REDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLC 341
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 87/197 (44%), Gaps = 21/197 (10%)
Query: 25 PSVNIYNFRIRGFAGAGNFE-------------------SESALIVARCKEKKVREAFGL 65
P V+ Y I+GF G S + L+ + C++ ++REA+ L
Sbjct: 223 PDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKL 282
Query: 66 WKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCD 125
M KG P+LV N +I G C M G +P+ +Y +L LCD
Sbjct: 283 LCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCD 342
Query: 126 RCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDA 185
+ D+ K L EMI +G SP + N LV +C +VE+A ++ V+ K G + +
Sbjct: 343 QGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFC--SFGKVEEACDVVEVVMKNGETLHS 400
Query: 186 VSYTTVISGFCYLDEPE 202
++ VI C DE E
Sbjct: 401 DTWEMVIPLICNEDESE 417
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 2/141 (1%)
Query: 59 VREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMS 118
+++AF L+K+ GV PN S N ++Q C M + + PD ++Y
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 119 LFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAK 178
L Q C + + + A ++L +M+ +G P + Y L+++ C + ++ +A +L M
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLC--RKTQLREAYKLLCRMKL 288
Query: 179 RGLSPDAVSYTTVISGFCYLD 199
+G +PD V Y T+I GFC D
Sbjct: 289 KGCNPDLVHYNTMILGFCRED 309
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 89/188 (47%), Gaps = 19/188 (10%)
Query: 9 ATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKA 68
A LK F ++ + G P S Y + LI C+ ++ EA L+
Sbjct: 175 AGLKIFLEMPKRGCDPDS---YTY--------------GTLISGLCRFGRIDEAKKLFTE 217
Query: 69 MTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCE 128
M +K P +V+ ++I GLC M KG+ P+ TY SL LC
Sbjct: 218 MVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGR 277
Query: 129 ADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSY 188
+ +A ++ M+ RG P++V Y L++ C + +++++AV +L M +GL PDA Y
Sbjct: 278 SLQAMELFEMMMARGCRPNMVTYTTLITGLC--KEQKIQEAVELLDRMNLQGLKPDAGLY 335
Query: 189 TTVISGFC 196
VISGFC
Sbjct: 336 GKVISGFC 343
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 111 PDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAV 170
P + Y+++ +L + + + A+K M GL P+V N L+ A C + V+ +
Sbjct: 119 PSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGT-VDAGL 177
Query: 171 GILRVMAKRGLSPDAVSYTTVISGFC 196
I M KRG PD+ +Y T+ISG C
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLC 203
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 87/176 (49%), Gaps = 7/176 (3%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S L+ A CKE K+ +A + KG+ PN V N +I G C M +
Sbjct: 358 SILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEK 417
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+G+ PD Y L + C+ E + A K +++M ++G+SPSV YN L+ Y G +
Sbjct: 418 QGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY--GRKYEF 475
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC---YLDEPELQWRSLQGTGRGLGPPI 219
+K IL+ M G P+ VSY T+I+ C L E ++ R ++ RG+ P +
Sbjct: 476 DKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDME--DRGVSPKV 529
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 92/236 (38%), Gaps = 64/236 (27%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
PS+ YN I G+ AGN E K KVRE M +EP+L++ N +
Sbjct: 247 PSLITYNTLIDGYCKAGNPE----------KSFKVRER------MKADHIEPSLITFNTL 290
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQ----------------------- 121
++GL M G PD T+ LF
Sbjct: 291 LKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGV 350
Query: 122 ------------LLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-----VGERE 164
LC + +KA ++L + +GL P+ VIYN ++ YC VG R
Sbjct: 351 KMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARM 410
Query: 165 RVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTG-RGLGPPI 219
++E M K+G+ PD ++Y +I FC L E E + + +G+ P +
Sbjct: 411 KIE-------AMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSV 459
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 83/201 (41%), Gaps = 22/201 (10%)
Query: 25 PSVNIYNFRIRGFAGAGNFE-------------------SESALIVARCKEKKVREAFGL 65
PSV YN I G+ F+ S LI CK K+ EA +
Sbjct: 457 PSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIV 516
Query: 66 WKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCD 125
+ M D+GV P + N +I G C M +KG+ + TY +L L
Sbjct: 517 KRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSM 576
Query: 126 RCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDA 185
+ +A +L E+ +GL P V YN L+S Y G V++ + + M + G+ P
Sbjct: 577 TGKLSEAEDLLLEISRKGLKPDVFTYNSLISGY--GFAGNVQRCIALYEEMKRSGIKPTL 634
Query: 186 VSYTTVISGFCYLDEPELQWR 206
+Y +IS C + EL R
Sbjct: 635 KTYHLLIS-LCTKEGIELTER 654
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 76/183 (41%), Gaps = 25/183 (13%)
Query: 15 RQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGV 74
R + G+SP V IYN I G C + K+ +AF K M KG+
Sbjct: 518 RDMEDRGVSP-KVRIYNMLIDGC----------------CSKGKIEDAFRFSKEMLKKGI 560
Query: 75 EPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYK 134
E NLV+ N +I GL ++RKGL PD TY SL +
Sbjct: 561 ELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIA 620
Query: 135 VLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISG 194
+ EM G+ P++ Y+ L+S C E + + R+ + L PD + Y V+
Sbjct: 621 LYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTE-----RLFGEMSLKPDLLVYNGVLH- 673
Query: 195 FCY 197
CY
Sbjct: 674 -CY 675
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 76/206 (36%), Gaps = 51/206 (24%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
PSV IYN I G CK K++ +A L+ M + + P+L++ N +
Sbjct: 212 PSVFIYNVLIDGL----------------CKGKRMNDAEQLFDEMLARRLLPSLITYNTL 255
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
I G C M + P T+ +L + L + A VL EM G
Sbjct: 256 IDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGF 315
Query: 145 SPSVVIYNKLVSAYCVGERE---------------------------------RVEKAVG 171
P ++ L Y E+ ++EKA
Sbjct: 316 VPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEE 375
Query: 172 IL-RVMAKRGLSPDAVSYTTVISGFC 196
IL R MAK GL P+ V Y T+I G+C
Sbjct: 376 ILGREMAK-GLVPNEVIYNTMIDGYC 400
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 2/146 (1%)
Query: 50 IVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGL 109
I A K V + L+ M + P++ N +I GLC M + L
Sbjct: 186 IQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRL 245
Query: 110 TPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKA 169
P TY +L C +K++KV M + PS++ +N L+ + + VE A
Sbjct: 246 LPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKG--LFKAGMVEDA 303
Query: 170 VGILRVMAKRGLSPDAVSYTTVISGF 195
+L+ M G PDA +++ + G+
Sbjct: 304 ENVLKEMKDLGFVPDAFTFSILFDGY 329
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 2/150 (1%)
Query: 57 KKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTY 116
K + EA L+ A+ ++G+ P+ S ++ L + P + Y
Sbjct: 123 KMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMY 182
Query: 117 MSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVM 176
Q + K ++ + M + PSV IYN L+ C G+R + A + M
Sbjct: 183 GKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKR--MNDAEQLFDEM 240
Query: 177 AKRGLSPDAVSYTTVISGFCYLDEPELQWR 206
R L P ++Y T+I G+C PE ++
Sbjct: 241 LARRLLPSLITYNTLIDGYCKAGNPEKSFK 270
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 91/203 (44%), Gaps = 24/203 (11%)
Query: 30 YNFRIRGFAGAG-------------------NFESESALIVARCKEKKVREAFGLWKAMT 70
YN I GF AG N + S LI + KE K+REA L K M
Sbjct: 301 YNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM 360
Query: 71 DKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEAD 130
+G+ PN ++ N++I G C M KG PD T+ L C D
Sbjct: 361 QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRID 420
Query: 131 KAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTT 190
++ EM +RG+ + V YN LV +C + ++E A + + M R + PD VSY
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLVQGFC--QSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 191 VISGFCYLDEPELQWRSLQGTGR 213
++ G C D EL+ ++L+ G+
Sbjct: 479 LLDGLC--DNGELE-KALEIFGK 498
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 80/150 (53%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S +I CK+ + AF L+ M KG + ++++ N +I G C M +
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+ ++P+ T+ L + +A ++L EM+ RG++P+ + YN L+ +C + R+
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC--KENRL 384
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
E+A+ ++ +M +G PD +++ +I+G+C
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYC 414
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 97/204 (47%), Gaps = 6/204 (2%)
Query: 19 RNGMSPPSVNIYN-FRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPN 77
++G + N++N I+GF + + + LI C + + L + M + + PN
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKA--DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 78 LVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLS 137
+V+ + +I M ++G+ P+ TY SL C ++A +++
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Query: 138 EMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCY 197
MI +G P ++ +N L++ YC + R++ + + R M+ RG+ + V+Y T++ GFC
Sbjct: 393 LMISKGCDPDIMTFNILINGYC--KANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 198 LDEPELQWRSLQG-TGRGLGPPIV 220
+ E+ + Q R + P IV
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIV 474
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 19/194 (9%)
Query: 12 KTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTD 71
+ +++ + G++P ++ YN I GF CKE ++ EA + M
Sbjct: 354 QLLKEMMQRGIAPNTIT-YNSLIDGF----------------CKENRLEEAIQMVDLMIS 396
Query: 72 KGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADK 131
KG +P++++ N +I G C M+ +G+ + TY +L Q C + +
Sbjct: 397 KGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEV 456
Query: 132 AYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTV 191
A K+ EM+ R + P +V Y L+ C + +EKA+ I + K + D Y +
Sbjct: 457 AKKLFQEMVSRRVRPDIVSYKILLDGLC--DNGELEKALEIFGKIEKSKMELDIGIYMII 514
Query: 192 ISGFCYLDEPELQW 205
I G C + + W
Sbjct: 515 IHGMCNASKVDDAW 528
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 19/184 (10%)
Query: 13 TFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDK 72
T +I + G P +V I+N + G C E +V EA L M +
Sbjct: 145 TMGKIMKLGYEPDTV-IFNTLLNGL----------------CLECRVSEALELVDRMVEM 187
Query: 73 GVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKA 132
G +P L++ N ++ GLC M G P+E TY + ++C + A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 133 YKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVI 192
++L +M R + V Y+ ++ C + ++ A + M +G D ++Y T+I
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLC--KDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 193 SGFC 196
GFC
Sbjct: 306 GGFC 309
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 2/149 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ L+ C KV +A L M + G +PN V+ V+ +C M
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+ + D Y + LC D A+ + +EM ++G ++ YN L+ +C R
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC--NAGRW 314
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+ +LR M KR +SP+ V+++ +I F
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSF 343
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S +I C+ +K+ AF + G EP+ V N ++ GLC M
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
G P T +L LC + A ++ M+ G P+ V Y +++ C + +
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMC--KSGQT 244
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
A+ +LR M +R + DAV Y+ +I G C
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 2/148 (1%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
L A K K+ L K M KG+ ++ + + +I C + + G
Sbjct: 94 LFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLG 153
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEK 168
PD + +L LC C +A +++ M+ G P+++ N LV+ C+ +V
Sbjct: 154 YEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLN--GKVSD 211
Query: 169 AVGILRVMAKRGLSPDAVSYTTVISGFC 196
AV ++ M + G P+ V+Y V++ C
Sbjct: 212 AVVLIDRMVETGFQPNEVTYGPVLNVMC 239
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ +I + CK + V +A L+K M KG+ PN+V+ +++I LC M
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
K + P+ T+ +L + +A K+ +MI R + P + YN LV+ +C+ +R+
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM--HDRL 381
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+KA + M + PD V+Y T+I GFC
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 411
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 85/185 (45%), Gaps = 8/185 (4%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + S+LI C + +A L M +K + PNLV+ NA+I
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M ++ + PD TY SL C DKA ++ M+ + P VV YN L+ +C
Sbjct: 354 DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC-- 411
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCY---LDEPELQWRSLQGTGRGLGPP 218
+ +RVE + R M+ RGL D V+YTT+I G + D + ++ + G PP
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV---PP 468
Query: 219 IVLKF 223
++ +
Sbjct: 469 DIMTY 473
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 22/216 (10%)
Query: 25 PSVNIYNFRIRGFAGAGNF-ESE------------------SALIVARCKEKKVREAFGL 65
P++ +N I F G F E+E ++L+ C ++ +A +
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 66 WKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCD 125
++ M K P++V+ N +I+G C M+ +GL D TY +L Q L
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 126 RCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDA 185
+ D A KV +M+ G+ P ++ Y+ L+ C ++EKA+ + M K + D
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC--NNGKLEKALEVFDYMQKSEIKLDI 505
Query: 186 VSYTTVISGFCYLDEPELQWRSLQGTG-RGLGPPIV 220
YTT+I G C + + W +G+ P +V
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 2/158 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + ++ CK A L M +E ++V N +I LC
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M KG+ P+ TY SL LC A ++LS+MI + ++P++V +N L+ A+ V
Sbjct: 284 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF-VK 342
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLD 199
E + VE A + M KR + PD +Y ++++GFC D
Sbjct: 343 EGKFVE-AEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 21/189 (11%)
Query: 11 LKTFRQIFRNGMSP---PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWK 67
L +Q+F +S P V YN I+GF CK K+V + L++
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGF----------------CKSKRVEDGTELFR 424
Query: 68 AMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRC 127
M+ +G+ + V+ +IQGL M G+ PD TY L LC+
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 484
Query: 128 EADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVS 187
+ +KA +V M + + IY ++ C + +V+ + ++ +G+ P+ V+
Sbjct: 485 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC--KAGKVDDGWDLFCSLSLKGVKPNVVT 542
Query: 188 YTTVISGFC 196
Y T+ISG C
Sbjct: 543 YNTMISGLC 551
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 7/175 (4%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
LI C+ ++ A L M G EP++V+ ++++ G C M G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEK 168
PD T+ +L L +A +A ++ M+ RG P++V Y +V+ C +R +
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC--KRGDTDL 243
Query: 169 AVGILRVMAKRGLSPDAVSYTTVISGFC---YLDEPELQWRSLQGTGRGLGPPIV 220
A+ +L M + D V + T+I C ++D+ ++ ++ +G+ P +V
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME--TKGIRPNVV 296
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 8/177 (4%)
Query: 22 MSPPSVNIYNFRIRGFA---GAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNL 78
++P S+++ G A G+G++ ++ + K+ +A GL+ M P++
Sbjct: 29 IAPSSIDLCGMCYWGRAFSSGSGDYRE---ILRNGLHDMKLDDAIGLFGGMVKSRPLPSI 85
Query: 79 VSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSE 138
V N ++ + M R + TY L C R + A +L +
Sbjct: 86 VEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGK 145
Query: 139 MIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
M+ G PS+V + L++ YC G +R+ AV ++ M + G PD +++TT+I G
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHG--KRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 20/129 (15%)
Query: 12 KTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESE-------------------SALIVA 52
K F+Q+ +G+ PP + Y+ + G G E + +I
Sbjct: 456 KVFKQMVSDGV-PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 514
Query: 53 RCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPD 112
CK KV + + L+ +++ KGV+PN+V+ N +I GLC M G P+
Sbjct: 515 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPN 574
Query: 113 ENTYMSLFQ 121
TY +L +
Sbjct: 575 SGTYNTLIR 583
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 84/150 (56%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S +I + C++ + A L+K M KG++ ++V+ N++++GLC M
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+ + P+ T+ L + + +A ++ EMI RG+SP+++ YN L+ YC+ + R+
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM--QNRL 349
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+A +L +M + SPD V++T++I G+C
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 29/232 (12%)
Query: 9 ATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALI---VAR------------ 53
A + F+++ G+ SV YN +RG AG + + L+ V+R
Sbjct: 246 AAISLFKEMETKGI-KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 54 ----CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGL 109
KE K++EA L+K M +G+ PN+++ N ++ G C M R
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 110 TPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKA 169
+PD T+ SL + C D KV + RGL + V Y+ LV +C + +++ A
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC--QSGKIKLA 422
Query: 170 VGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQ-----WRSLQGTGRGLG 216
+ + M G+ PD ++Y ++ G C D +L+ + LQ + LG
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLC--DNGKLEKALEIFEDLQKSKMDLG 472
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 81/171 (47%), Gaps = 5/171 (2%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
++LI C K+V + +++ ++ +G+ N V+ + ++QG C M
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
G+ PD TY L LCD + +KA ++ ++ + +V+Y ++ C G +V
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG--GKV 489
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC---YLDEPELQWRSLQGTGRG 214
E A + + +G+ P+ ++YT +ISG C L E + R ++ G
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA 540
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 73/174 (41%), Gaps = 33/174 (18%)
Query: 56 EKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENT 115
E KV EA L M + G +P++V+ N+++ G+C M + + D T
Sbjct: 171 EGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFT 230
Query: 116 YMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG-------------- 161
Y ++ LC D A + EM +G+ SVV YN LV C
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Query: 162 ERE-------------------RVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
RE ++++A + + M RG+SP+ ++Y T++ G+C
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 2/157 (1%)
Query: 40 AGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXX 99
A N + + +I C+ K A+ + + G EP+ + N +I+GL
Sbjct: 120 AHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVV 179
Query: 100 XXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC 159
M G PD TY S+ +C + A +L +M R + V Y+ ++ + C
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239
Query: 160 VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
++ A+ + + M +G+ V+Y +++ G C
Sbjct: 240 --RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 2/142 (1%)
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
+ K+ K + G+ N+ + N +I C + + G PD
Sbjct: 100 RTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTT 159
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILR 174
T+ +L + L + +A ++ M+ G P VV YN +V+ C + A+ +LR
Sbjct: 160 TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL--ALDLLR 217
Query: 175 VMAKRGLSPDAVSYTTVISGFC 196
M +R + D +Y+T+I C
Sbjct: 218 KMEERNVKADVFTYSTIIDSLC 239
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 81/202 (40%), Gaps = 22/202 (10%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFE-------------------SESALIV 51
+K FR I + G+ +V Y+ ++GF +G + + L+
Sbjct: 388 MKVFRNISKRGLVANAVT-YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446
Query: 52 ARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTP 111
C K+ +A +++ + ++ +V +I+G+C + KG+ P
Sbjct: 447 GLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKP 506
Query: 112 DENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVG 171
+ TY + LC + +A +L +M G +P+ YN L+ A+ + +
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL--RDGDLTASAK 564
Query: 172 ILRVMAKRGLSPDAVSYTTVIS 193
++ M G S DA S VI
Sbjct: 565 LIEEMKSCGFSADASSIKMVID 586
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 77/146 (52%), Gaps = 2/146 (1%)
Query: 54 CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDE 113
CK + A L K M +EP +V N +I LC M+ KG+ P+
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291
Query: 114 NTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGIL 173
TY SL + LC+ A ++LS+MI R ++P+VV ++ L+ A+ V E + VE A +
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF-VKEGKLVE-AEKLY 349
Query: 174 RVMAKRGLSPDAVSYTTVISGFCYLD 199
M KR + PD +Y+++I+GFC D
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHD 375
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ +I A C K V +A L+ M +KG+ PN+V+ N++I+ LC M
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 319
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+ + P+ T+ +L + +A K+ EMI R + P + Y+ L++ +C+ +R+
Sbjct: 320 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM--HDRL 377
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
++A + +M + P+ V+Y T+I GFC
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFC 407
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 2/154 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + ++LI C + +A L M ++ + PN+V+ +A+I
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M ++ + PD TY SL C D+A + MI + P+VV YN L+ +C
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC-- 407
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+ +RV++ + + R M++RGL + V+YTT+I GF
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 8/185 (4%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S+LI C ++ EA +++ M K PN+V+ N +I+G C M++
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ 424
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+GL + TY +L E D A V +M+ G+ P ++ Y+ L+ C +V
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC--NNGKV 482
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTG-RGLGPPIVLKFFF 225
E A+ + + + + PD +Y +I G C + E W +G+ P +V
Sbjct: 483 ETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV----- 537
Query: 226 TSTTM 230
T TTM
Sbjct: 538 TYTTM 542
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 2/164 (1%)
Query: 33 RIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXX 92
+++ + N + S LI C+ ++ A + M G EP++V+ N+++ G C
Sbjct: 106 QMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGN 165
Query: 93 XXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYN 152
M G PD T+ +L L A +A ++ M+V+G P +V Y
Sbjct: 166 RISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYG 225
Query: 153 KLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+V+ C +R ++ A+ +L+ M + + P V Y T+I C
Sbjct: 226 IVVNGLC--KRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC 267
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 21/191 (10%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
P+V YN I+GF CK K+V E L++ M+ +G+ N V+ +
Sbjct: 394 PNVVTYNTLIKGF----------------CKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
I G M G+ PD TY L LC+ + + A V + +
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497
Query: 145 SPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC---YLDEP 201
P + YN ++ C + +VE + ++ +G+ P+ V+YTT++SGFC +E
Sbjct: 498 EPDIYTYNIMIEGMC--KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 555
Query: 202 ELQWRSLQGTG 212
+ +R ++ G
Sbjct: 556 DALFREMKEEG 566
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 7/194 (3%)
Query: 5 LSSTATLKTFRQIF---RNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVRE 61
+SST R + + G +PPS + +F +R F+G + + R + K+ +
Sbjct: 7 ISSTGNRFVHRSLLGKGKCGTAPPSFSHCSFWVRDFSGVR--YDYRKISINRLNDLKLDD 64
Query: 62 AFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQ 121
A L+ M P++V + ++ + M G++ + TY L
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 122 LLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGL 181
C R + A VL++M+ G P +V N L++ +C G R+ AV ++ M + G
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHG--NRISDAVSLVGQMVEMGY 182
Query: 182 SPDAVSYTTVISGF 195
PD+ ++ T+I G
Sbjct: 183 QPDSFTFNTLIHGL 196
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ LI + + EA L M KG +P+LV+ V+ GLC M +
Sbjct: 190 NTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ 249
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+ P Y ++ LC+ + A + +EM +G+ P+VV YN L+ C R
Sbjct: 250 GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC--NYGRW 307
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGF 195
A +L M +R ++P+ V+++ +I F
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAF 336
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 2/158 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + ++ CK + AF L M +E N+V + VI LC
Sbjct: 224 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 283
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M KG+ P+ TY SL LC+ A ++LS+MI R ++P+VV +N L+ A+ V
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAF-VK 342
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLD 199
E + VE A + M KR + PD +Y+++I+GFC D
Sbjct: 343 EGKLVE-AEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 379
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + S+LI C ++ +A L M ++ + PN+V+ NA+I
Sbjct: 294 NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M ++ + PD TY SL C D+A + MI + P+VV YN L++ +C
Sbjct: 354 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC-- 411
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+ +R+++ V + R M++RGL + V+YTT+I GF
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S +I + CK + +A L+ M +KGV PN+++ +++I LC M
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+ + P+ T+ +L + +A K+ EMI R + P + Y+ L++ +C+ +R+
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM--HDRL 381
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
++A + +M + P+ V+Y T+I+GFC
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFC 411
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 3/176 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S+LI C ++ EA +++ M K PN+V+ N +I G C M++
Sbjct: 369 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ 428
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+GL + TY +L + D A V +M+ G+ P+++ YN L+ C + ++
Sbjct: 429 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC--KNGKL 486
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTG-RGLGPPIVL 221
EKA+ + + + + P +Y +I G C + E W +G+ P +++
Sbjct: 487 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVII 542
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 18/172 (10%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
P+V YN I GF CK K++ E L++ M+ +G+ N V+ +
Sbjct: 398 PNVVTYNTLINGF----------------CKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
I G M G+ P+ TY +L LC + +KA V + +
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 145 SPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
P++ YN ++ C + +VE + ++ +G+ PD + Y T+ISGFC
Sbjct: 502 EPTIYTYNIMIEGMC--KAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFC 551
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 13/217 (5%)
Query: 5 LSSTATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFG 64
LS+ A +K F + G + I + N + + LI C+ ++ A
Sbjct: 92 LSAIAKMKKFDLVISLGEKMQRLGI----------SHNLYTYNILINCFCRRSQISLALA 141
Query: 65 LWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLC 124
L M G EP++V+ ++++ G C M G PD T+ +L L
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 125 DRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPD 184
+A +A ++ M+ RG P++V Y +V+ C +R ++ A +L M + +
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC--KRGDIDLAFNLLNKMEAAKIEAN 259
Query: 185 AVSYTTVISGFC-YLDEPELQWRSLQGTGRGLGPPIV 220
V Y+TVI C Y E + + +G+ P ++
Sbjct: 260 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 2/138 (1%)
Query: 58 KVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYM 117
K+ +A GL+ M P++ N ++ + M R G++ + TY
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 118 SLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMA 177
L C R + A +L +M+ G PS+V + L++ YC G +R+ AV ++ M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG--KRISDAVALVDQMV 182
Query: 178 KRGLSPDAVSYTTVISGF 195
+ G PD +++TT+I G
Sbjct: 183 EMGYRPDTITFTTLIHGL 200
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 21/196 (10%)
Query: 26 SVNIYNFRIRGFAGAGNFESE-------------------SALIVARCKEKKVREAFGLW 66
+ IY IRGF AG ++ SALI KE K+REA L
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 67 KAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDR 126
K M +G+ P+ V+ ++I G C M KG P+ T+ L C
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 127 CEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAV 186
D ++ +M +RG+ V YN L+ +C E ++E A + + M R + PD V
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC--ELGKLEVAKELFQEMVSRRVRPDIV 458
Query: 187 SYTTVISGFCYLDEPE 202
SY ++ G C EPE
Sbjct: 459 SYKILLDGLCDNGEPE 474
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 2/151 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S LI C E +V EA L M + G +P L++ NA++ GLC M
Sbjct: 146 STLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVE 205
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
G P+E TY + +++C + A ++L +M R + V Y+ ++ C + +
Sbjct: 206 TGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC--KDGSL 263
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCY 197
+ A + M +G D + YTT+I GFCY
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 25/221 (11%)
Query: 15 RQIFRNGMSPPSVNIYNFRIRGFA------------------GAG-NFESESALIVARCK 55
+++ + G+SP +V Y I GF G G N + + LI CK
Sbjct: 341 KEMIQRGISPDTVT-YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCK 399
Query: 56 EKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENT 115
+ + L++ M+ +GV + V+ N +IQG C M + + PD +
Sbjct: 400 ANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459
Query: 116 YMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRV 175
Y L LCD E +KA ++ ++ + + IYN ++ C +V+ A +
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC--NASKVDDAWDLFCS 517
Query: 176 MAKRGLSPDAVSYTTVISGFCY---LDEPELQWRSLQGTGR 213
+ +G+ PD +Y +I G C L E +L +R ++ G
Sbjct: 518 LPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S +I CK+ + AF L+ M KG + +++ +I+G C M +
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+ +TPD + +L + +A ++ EMI RG+SP V Y L+ +C + ++
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFC--KENQL 368
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+KA +L +M +G P+ ++ +I+G+C
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYC 398
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 2/157 (1%)
Query: 40 AGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXX 99
A N + S +I C+ +K+ AF + G EP+ V+ + +I GLC
Sbjct: 104 AHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALE 163
Query: 100 XXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC 159
M G P T +L LC + A ++ M+ G P+ V Y ++ C
Sbjct: 164 LVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMC 223
Query: 160 VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+ + A+ +LR M +R + DAV Y+ +I G C
Sbjct: 224 --KSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 83/202 (41%), Gaps = 22/202 (10%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFE-------------------SESALIV 51
L+ FR++ G+ +V YN I+GF G E S L+
Sbjct: 407 LELFRKMSLRGVVADTVT-YNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLD 465
Query: 52 ARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTP 111
C + +A +++ + +E ++ N +I G+C + KG+ P
Sbjct: 466 GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 525
Query: 112 DENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVG 171
D TY + LC + +A + +M G SP+ YN L+ A+ +GE + K+
Sbjct: 526 DVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH-LGEGD-ATKSAK 583
Query: 172 ILRVMAKRGLSPDAVSYTTVIS 193
++ + + G S DA + V+
Sbjct: 584 LIEEIKRCGFSVDASTVKMVVD 605
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 82/150 (54%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ LI A E V EA L M +G++P++ + N +I+G+C +
Sbjct: 232 TILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLEL 291
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
KG PD +Y L + L ++ + ++ K++++M P+VV Y+ L++ C ++
Sbjct: 292 KGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC--RDGKI 349
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
E+A+ +L++M ++GL+PDA SY +I+ FC
Sbjct: 350 EEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 23/192 (11%)
Query: 25 PSVNIYNFRIRGFAGAGNFE-------------------SESALIVARCKEKKVREAFGL 65
P V YN +R G +E + S LI C++ K+ EA L
Sbjct: 296 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 355
Query: 66 WKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCD 125
K M +KG+ P+ S + +I C M G PD Y ++ LC
Sbjct: 356 LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK 415
Query: 126 RCEADKAYKVLSEMIVRGLSPSVVIYNKLVSA-YCVGERERVEKAVGILRVMAKRGLSPD 184
+AD+A ++ ++ G SP+ YN + SA + G++ R A+ ++ M G+ PD
Sbjct: 416 NGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR---ALHMILEMMSNGIDPD 472
Query: 185 AVSYTTVISGFC 196
++Y ++IS C
Sbjct: 473 EITYNSMISCLC 484
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 2/151 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ ++ CK K +A ++ + + G PN S N + L M
Sbjct: 407 NTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMS 466
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
G+ PDE TY S+ LC D+A+++L +M PSVV YN ++ +C + R+
Sbjct: 467 NGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC--KAHRI 524
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCY 197
E A+ +L M G P+ +YT +I G +
Sbjct: 525 EDAINVLESMVGNGCRPNETTYTVLIEGIGF 555
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 21/187 (11%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMT 70
LK ++ G+ P + YN IRG CKE V AF + + +
Sbjct: 248 LKLMDEMLSRGLKP-DMFTYNTIIRGM----------------CKEGMVDRAFEMVRNLE 290
Query: 71 DKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEAD 130
KG EP+++S N +++ L M + P+ TY L LC + +
Sbjct: 291 LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 350
Query: 131 KAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERE-RVEKAVGILRVMAKRGLSPDAVSYT 189
+A +L M +GL+P Y+ L++A+C RE R++ A+ L M G PD V+Y
Sbjct: 351 EAMNLLKLMKEKGLTPDAYSYDPLIAAFC---REGRLDVAIEFLETMISDGCLPDIVNYN 407
Query: 190 TVISGFC 196
TV++ C
Sbjct: 408 TVLATLC 414
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
Query: 75 EPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYK 134
+P++ + NA+I G C M K +PD TY + LC R + D A K
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 135 VLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISG 194
VL++++ P+V+ Y L+ A + V++A+ ++ M RGL PD +Y T+I G
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATML--EGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 195 FC 196
C
Sbjct: 273 MC 274
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 45 SESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXM 104
S LI A C+E ++ A + M G P++V+ N V+ LC +
Sbjct: 370 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
Query: 105 NRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERE 164
G +P+ ++Y ++F L + +A ++ EM+ G+ P + YN ++S C RE
Sbjct: 430 GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLC---RE 486
Query: 165 -RVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
V++A +L M P V+Y V+ GFC
Sbjct: 487 GMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC 519
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 2/146 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ALI CK ++ +A + M K P+ V+ N +I LC +
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS 221
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
P TY L + D+A K++ EM+ RGL P + YN ++ C + V
Sbjct: 222 DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC--KEGMV 279
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVI 192
++A ++R + +G PD +SY ++
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILL 305
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ +I A C K V +A L+ M +KG+ PN+V+ N++I+ LC M
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+ + P+ T+ +L + +A K+ EMI R + P + Y+ L++ +C+ +R+
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM--HDRL 376
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
++A + +M + P+ V+Y T+I GFC
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 2/146 (1%)
Query: 54 CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDE 113
CK + A L K M +E ++V +I LC M+ KG+ P+
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290
Query: 114 NTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGIL 173
TY SL + LC+ A ++LS+MI R ++P+VV ++ L+ A+ V E + VE A +
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF-VKEGKLVE-AEKLY 348
Query: 174 RVMAKRGLSPDAVSYTTVISGFCYLD 199
M KR + PD +Y+++I+GFC D
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHD 374
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 85/176 (48%), Gaps = 3/176 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S+LI C ++ EA +++ M K PN+V+ N +I+G C M++
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+GL + TY +L Q L + D A K+ +M+ G+ P ++ Y+ L+ C + ++
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC--KYGKL 481
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTG-RGLGPPIVL 221
EKA+ + + K + PD +Y +I G C + E W +G+ P +++
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 537
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 21/191 (10%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
P+V YN I+GF CK K+V E L++ M+ +G+ N V+ N +
Sbjct: 393 PNVVTYNTLIKGF----------------CKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
IQGL M G+ PD TY L LC + +KA V + +
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 145 SPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC---YLDEP 201
P + YN ++ C + +VE + ++ +G+ P+ + YTT+ISGFC +E
Sbjct: 497 EPDIYTYNIMIEGMC--KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Query: 202 ELQWRSLQGTG 212
+ +R ++ G
Sbjct: 555 DALFREMKEDG 565
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 2/140 (1%)
Query: 56 EKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENT 115
K EA L M +G +P+L + V+ GLC M + + D
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 116 YMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRV 175
Y ++ LC+ + A + +EM +G+ P+VV YN L+ C+ R A +L
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR--CLCNYGRWSDASRLLSD 315
Query: 176 MAKRGLSPDAVSYTTVISGF 195
M +R ++P+ V+++ +I F
Sbjct: 316 MIERKINPNVVTFSALIDAF 335
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 68/168 (40%), Gaps = 2/168 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ L+ A K K L + M + + +L S N +I C M +
Sbjct: 84 NKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMK 143
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
G PD T SL C +A ++ +M V P+ V +N L+ + +
Sbjct: 144 LGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL--HNKA 201
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTGRG 214
+AV ++ M RG PD +Y TV++G C + +L L+ +G
Sbjct: 202 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 249
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 85/201 (42%), Gaps = 57/201 (28%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFE-------------------SESALIV 51
++ FR++ + G+ +V YN I+G AG+ + + S L+
Sbjct: 415 MELFREMSQRGLVGNTVT-YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 52 ARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTP 111
CK K+ +A +++ + +EP++ + N +I+G+C + G
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMC----------------KAGKVE 517
Query: 112 DENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVG 171
D + + + ++G+ P+V+IY ++S +C + E+A
Sbjct: 518 D-------------------GWDLFCSLSLKGVKPNVIIYTTMISGFC--RKGLKEEADA 556
Query: 172 ILRVMAKRGLSPDAVSYTTVI 192
+ R M + G P++ +Y T+I
Sbjct: 557 LFREMKEDGTLPNSGTYNTLI 577
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Query: 26 SVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVI 85
++ +++ + A N S S LI C+ ++ EAFGL M +KG +P+ + +I
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308
Query: 86 QGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLS 145
+ LC M +G P+ +TY L LC + ++A V +M+ +
Sbjct: 309 KALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIF 368
Query: 146 PSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEP---- 201
PSV+ YN L++ YC + RV A +L VM KR P+ ++ ++ G C + +P
Sbjct: 369 PSVITYNALINGYC--KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAV 426
Query: 202 ELQWRSLQGTGRGLGPPIV 220
L R L GL P IV
Sbjct: 427 HLLKRMLDN---GLSPDIV 442
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 21/191 (10%)
Query: 25 PSVNIYNFRIRGFAGAGNFE-------------------SESALIVARCKEKKVREAFGL 65
P+V+ Y I G G E + +ALI CK+ +V AF L
Sbjct: 334 PNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFEL 393
Query: 66 WKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCD 125
M + +PN+ + N +++GLC M GL+PD +Y L LC
Sbjct: 394 LTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCR 453
Query: 126 RCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDA 185
+ AYK+LS M + P + + +++A+C ++ + + A L +M ++G+S D
Sbjct: 454 EGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFC--KQGKADVASAFLGLMLRKGISLDE 511
Query: 186 VSYTTVISGFC 196
V+ TT+I G C
Sbjct: 512 VTGTTLIDGVC 522
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 85/223 (38%), Gaps = 52/223 (23%)
Query: 25 PSVNIYNFRIRGFAGAG-------------------NFESESALIVARCKEKKVREAFGL 65
PSV YN I G+ G N + + L+ C+ K +A L
Sbjct: 369 PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL 428
Query: 66 WKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCD 125
K M D G+ P++VS N +I GLC MN + PD T+ ++ C
Sbjct: 429 LKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK 488
Query: 126 RCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERE-------------------- 164
+ +AD A L M+ +G+S V L+ C VG+
Sbjct: 489 QGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHS 548
Query: 165 ------------RVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+V++ + +L + K GL P V+YTT++ G
Sbjct: 549 LNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGL 591
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 25/221 (11%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGN-------------FESE------SALIVARC 54
+++ NG+SP V+ YN I G G+ F+ E +A+I A C
Sbjct: 429 LKRMLDNGLSPDIVS-YNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFC 487
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
K+ K A M KG+ + V+ +I G+C + + + +
Sbjct: 488 KQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPH 547
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILR 174
+ + +L C+ + +L ++ GL PSVV Y LV + + + IL
Sbjct: 548 SLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDG--LIRSGDITGSFRILE 605
Query: 175 VMAKRGLSPDAVSYTTVISGFCY---LDEPELQWRSLQGTG 212
+M G P+ YT +I+G C ++E E ++Q +G
Sbjct: 606 LMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSG 646
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 2/138 (1%)
Query: 58 KVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYM 117
KV+E + + G+ P++V+ ++ GL M G P+ Y
Sbjct: 561 KVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYT 620
Query: 118 SLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMA 177
+ LC ++A K+LS M G+SP+ V Y +V Y ++++A+ +R M
Sbjct: 621 IIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYV--NNGKLDRALETVRAMV 678
Query: 178 KRGLSPDAVSYTTVISGF 195
+RG + Y++++ GF
Sbjct: 679 ERGYELNDRIYSSLLQGF 696
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ +I + CK + V +A L+K M KG+ PN+V+ +++I LC M
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
K + P+ T+ +L + +A K+ +MI R + P + YN L++ +C+ +R+
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM--HDRL 306
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+KA + M + PD +Y T+I GFC
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFC 336
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 8/185 (4%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + S+LI C + +A L M +K + PNLV+ NA+I
Sbjct: 219 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLH 278
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M ++ + PD TY SL C DKA ++ M+ + P + YN L+ +C
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFC-- 336
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCY---LDEPELQWRSLQGTGRGLGPP 218
+ +RVE + R M+ RGL D V+YTT+I G + D + ++ + G PP
Sbjct: 337 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV---PP 393
Query: 219 IVLKF 223
++ +
Sbjct: 394 DIMTY 398
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 2/158 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + ++ CK + AF L M +E ++V N +I LC
Sbjct: 149 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 208
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M KG+ P+ TY SL LC A ++LS+MI + ++P++V +N L+ A+ V
Sbjct: 209 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF-VK 267
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLD 199
E + VE A + M KR + PD +Y ++I+GFC D
Sbjct: 268 EGKFVE-AEKLHDDMIKRSIDPDIFTYNSLINGFCMHD 304
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 93/216 (43%), Gaps = 22/216 (10%)
Query: 25 PSVNIYNFRIRGFAGAGNF-ESE------------------SALIVARCKEKKVREAFGL 65
P++ +N I F G F E+E ++LI C ++ +A +
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 66 WKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCD 125
++ M K P+L + N +I+G C M+ +GL D TY +L Q L
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 126 RCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDA 185
+ D A KV +M+ G+ P ++ Y+ L+ C ++EKA+ + M K + D
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC--NNGKLEKALEVFDYMQKSEIKLDI 430
Query: 186 VSYTTVISGFCYLDEPELQWRSLQGTG-RGLGPPIV 220
YTT+I G C + + W +G+ P +V
Sbjct: 431 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 466
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 21/189 (11%)
Query: 11 LKTFRQIFRNGMSP---PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWK 67
L +Q+F +S P ++ YN I+GF CK K+V + L++
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGF----------------CKSKRVEDGTELFR 349
Query: 68 AMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRC 127
M+ +G+ + V+ +IQGL M G+ PD TY L LC+
Sbjct: 350 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 409
Query: 128 EADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVS 187
+ +KA +V M + + IY ++ C + +V+ + ++ +G+ P+ V+
Sbjct: 410 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC--KAGKVDDGWDLFCSLSLKGVKPNVVT 467
Query: 188 YTTVISGFC 196
Y T+ISG C
Sbjct: 468 YNTMISGLC 476
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 95/219 (43%), Gaps = 17/219 (7%)
Query: 5 LSSTATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFG 64
LS+ A +K F + G + I + N + + LI C+ ++ A
Sbjct: 17 LSAIAKMKKFDLVISLGEKMQRLGI----------SHNLYTYNILINCFCRRSQISLALA 66
Query: 65 LWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLC 124
L M G EP++V+ ++++ G C M G PD T+ +L L
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 125 DRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPD 184
+A +A ++ M+ RG P++V Y +V+ C +R ++ A +L M + D
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC--KRGDIDLAFNLLNKMEAAKIEAD 184
Query: 185 AVSYTTVISGFC---YLDEPELQWRSLQGTGRGLGPPIV 220
V + T+I C ++D+ ++ ++ +G+ P +V
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEME--TKGIRPNVV 221
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 76 PNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKV 135
P++ N ++ + M R G++ + TY L C R + A +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 136 LSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
L +M+ G PS+V + L++ YC G +R+ AV ++ M + G PD +++TT+I G
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHG--KRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 20/129 (15%)
Query: 12 KTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESE-------------------SALIVA 52
K F+Q+ +G+ PP + Y+ + G G E + +I
Sbjct: 381 KVFKQMVSDGV-PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 439
Query: 53 RCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPD 112
CK KV + + L+ +++ KGV+PN+V+ N +I GLC M G PD
Sbjct: 440 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPD 499
Query: 113 ENTYMSLFQ 121
TY +L +
Sbjct: 500 SGTYNTLIR 508
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 2/163 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ L+ A K KK L + M G+ NL + N +I C M +
Sbjct: 14 NKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 73
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
G P T SL C A ++ +M+ G P + + L+ + +
Sbjct: 74 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL--HNKA 131
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQ 209
+AV ++ M +RG P+ V+Y V++G C + +L + L
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 174
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 19/192 (9%)
Query: 30 YNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLC 89
YN I GF AG ++ + L+ + M + + PN+V+ + +I
Sbjct: 301 YNILIGGFCNAGRWDDGAKLL----------------RDMIKRKINPNVVTFSVLIDSFV 344
Query: 90 XXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVV 149
M +G+ PD TY SL C DKA +++ M+ +G P++
Sbjct: 345 KEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIR 404
Query: 150 IYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQ 209
+N L++ YC + R++ + + R M+ RG+ D V+Y T+I GFC L + + Q
Sbjct: 405 TFNILINGYC--KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Query: 210 G-TGRGLGPPIV 220
R + P IV
Sbjct: 463 EMVSRKVPPNIV 474
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 2/159 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
++LI CKE + +A + M KG +PN+ + N +I G C M+
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSL 431
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+G+ D TY +L Q C+ + + A ++ EM+ R + P++V Y L+ C +
Sbjct: 432 RGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC--DNGES 489
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQW 205
EKA+ I + K + D Y +I G C + + W
Sbjct: 490 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 528
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S +I CK + AF L+ M KG+ N+++ N +I G C M +
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+ + P+ T+ L + +A ++ EMI RG++P + Y L+ +C + +
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC--KENHL 384
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+KA ++ +M +G P+ ++ +I+G+C
Sbjct: 385 DKANQMVDLMVSKGCDPNIRTFNILINGYC 414
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 5/176 (2%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + + LI CK ++ + L++ M+ +GV + V+ N +IQG C
Sbjct: 402 NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELF 461
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M + + P+ TY L LCD E++KA ++ ++ + + IYN ++ C
Sbjct: 462 QEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC-- 519
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCY---LDEPELQWRSLQGTGRG 214
+V+ A + + +G+ P +Y +I G C L E EL +R ++ G
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA 575
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 7/177 (3%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ L+ C K EA L M + G +PN V+ V+ +C M
Sbjct: 197 NTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+ + D Y + LC D A+ + +EM ++G++ +++ YN L+ +C R
Sbjct: 257 RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC--NAGRW 314
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC---YLDEPELQWRSLQGTGRGLGPPIV 220
+ +LR M KR ++P+ V+++ +I F L E E + + RG+ P +
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM--IHRGIAPDTI 369
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S LI C E +V EA L M + G +P+L++ N ++ GLC M
Sbjct: 162 STLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE 221
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
G P+ TY + ++C + A ++L +M R + V Y+ ++ C + +
Sbjct: 222 YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC--KHGSL 279
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+ A + M +G++ + ++Y +I GFC
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 2/157 (1%)
Query: 40 AGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXX 99
A N + S +I C+ +K+ AF + G EPN ++ + +I GLC
Sbjct: 120 AHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALE 179
Query: 100 XXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC 159
M G PD T +L LC + +A ++ +M+ G P+ V Y +++ C
Sbjct: 180 LVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMC 239
Query: 160 VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+ + A+ +LR M +R + DAV Y+ +I G C
Sbjct: 240 --KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 74/147 (50%), Gaps = 2/147 (1%)
Query: 50 IVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGL 109
I A CK KV EA L+ M + GV PN+V+ N VI GL M +G+
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326
Query: 110 TPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKA 169
P TY L + L AY VL EM +G P+V++YN L+ ++ E + KA
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI--EAGSLNKA 384
Query: 170 VGILRVMAKRGLSPDAVSYTTVISGFC 196
+ I +M +GLS + +Y T+I G+C
Sbjct: 385 IEIKDLMVSKGLSLTSSTYNTLIKGYC 411
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 19/177 (10%)
Query: 19 RNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNL 78
RNGM P ++Y + S +I CK ++ E + M K V+PN
Sbjct: 603 RNGMLP---DVYTY--------------SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 79 VSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSE 138
V N +I+ C M KG++P+ TY SL + + ++A + E
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 139 MIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
M + GL P+V Y L+ Y G+ ++ K +LR M + + P+ ++YT +I G+
Sbjct: 706 MRMEGLEPNVFHYTALIDGY--GKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 760
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 89/186 (47%), Gaps = 10/186 (5%)
Query: 45 SESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXM 104
S + LI C +KK+ EAF M +G++P+ + + +I GL
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 601
Query: 105 NRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERE 164
R G+ PD TY + C ++ + EM+ + + P+ V+YN L+ AYC
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYC--RSG 659
Query: 165 RVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYL---DEPELQWRSLQGTGRGLGPPIVL 221
R+ A+ + M +G+SP++ +YT++I G + +E +L + ++ GL P +
Sbjct: 660 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR--MEGLEPNV-- 715
Query: 222 KFFFTS 227
F +T+
Sbjct: 716 -FHYTA 720
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 19/186 (10%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMT 70
+K F ++ G++P +V +N I G G ++ EAF + M
Sbjct: 280 VKLFSKMEEAGVAP-NVVTFNTVIDGLGMCGRYD----------------EAFMFKEKMV 322
Query: 71 DKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEAD 130
++G+EP L++ + +++GL M +KG P+ Y +L + +
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 131 KAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTT 190
KA ++ M+ +GLS + YN L+ YC + + + A +L+ M G + + S+T+
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYC--KNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 191 VISGFC 196
VI C
Sbjct: 441 VICLLC 446
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 2/161 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N S +++I C A M + + P +I GLC
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
KG D T +L LC+ + D+A+++ E++ RG V YN L+S C
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC-- 551
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPE 202
++++++A L M KRGL PD +Y+ +I G +++ E
Sbjct: 552 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 592
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 86/230 (37%), Gaps = 54/230 (23%)
Query: 24 PPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNA 83
PP+V +YN I F AG+ + +A + M KG+ + N
Sbjct: 362 PPNVIVYNNLIDSFIEAGS----------------LNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 84 VIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRG 143
+I+G C M G ++ ++ S+ LLC D A + + EM++R
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 144 LSPSVVIYNKLVSAYC---------------------------------VGERERVEKAV 170
+SP + L+S C + E ++++A
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 171 GILRVMAKRGLSPDAVSYTTVISGFC---YLDEPELQWRSLQGTGRGLGP 217
I + + RG D VSY T+ISG C LDE + + RGL P
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM--VKRGLKP 573
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
KG+ P + T L L E K + +++ +G+SP V ++ ++A+C G +V
Sbjct: 220 KGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKG--GKV 276
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGF 195
E+AV + M + G++P+ V++ TVI G
Sbjct: 277 EEAVKLFSKMEEAGVAPNVVTFNTVIDGL 305
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 74/147 (50%), Gaps = 2/147 (1%)
Query: 50 IVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGL 109
I A CK KV EA L+ M + GV PN+V+ N VI GL M +G+
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326
Query: 110 TPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKA 169
P TY L + L AY VL EM +G P+V++YN L+ ++ E + KA
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI--EAGSLNKA 384
Query: 170 VGILRVMAKRGLSPDAVSYTTVISGFC 196
+ I +M +GLS + +Y T+I G+C
Sbjct: 385 IEIKDLMVSKGLSLTSSTYNTLIKGYC 411
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 19/177 (10%)
Query: 19 RNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNL 78
RNGM P ++Y + S +I CK ++ E + M K V+PN
Sbjct: 603 RNGMLP---DVYTY--------------SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 79 VSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSE 138
V N +I+ C M KG++P+ TY SL + + ++A + E
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 139 MIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
M + GL P+V Y L+ Y G+ ++ K +LR M + + P+ ++YT +I G+
Sbjct: 706 MRMEGLEPNVFHYTALIDGY--GKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 760
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 89/186 (47%), Gaps = 10/186 (5%)
Query: 45 SESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXM 104
S + LI C +KK+ EAF M +G++P+ + + +I GL
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 601
Query: 105 NRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERE 164
R G+ PD TY + C ++ + EM+ + + P+ V+YN L+ AYC
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYC--RSG 659
Query: 165 RVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYL---DEPELQWRSLQGTGRGLGPPIVL 221
R+ A+ + M +G+SP++ +YT++I G + +E +L + ++ GL P +
Sbjct: 660 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR--MEGLEPNV-- 715
Query: 222 KFFFTS 227
F +T+
Sbjct: 716 -FHYTA 720
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 19/186 (10%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMT 70
+K F ++ G++P +V +N I G G ++ EAF + M
Sbjct: 280 VKLFSKMEEAGVAP-NVVTFNTVIDGLGMCGRYD----------------EAFMFKEKMV 322
Query: 71 DKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEAD 130
++G+EP L++ + +++GL M +KG P+ Y +L + +
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 131 KAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTT 190
KA ++ M+ +GLS + YN L+ YC + + + A +L+ M G + + S+T+
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYC--KNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 191 VISGFC 196
VI C
Sbjct: 441 VICLLC 446
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 2/161 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N S +++I C A M + + P +I GLC
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
KG D T +L LC+ + D+A+++ E++ RG V YN L+S C
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC-- 551
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPE 202
++++++A L M KRGL PD +Y+ +I G +++ E
Sbjct: 552 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 592
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 86/230 (37%), Gaps = 54/230 (23%)
Query: 24 PPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNA 83
PP+V +YN I F AG+ + +A + M KG+ + N
Sbjct: 362 PPNVIVYNNLIDSFIEAGS----------------LNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 84 VIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRG 143
+I+G C M G ++ ++ S+ LLC D A + + EM++R
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 144 LSPSVVIYNKLVSAYC---------------------------------VGERERVEKAV 170
+SP + L+S C + E ++++A
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 171 GILRVMAKRGLSPDAVSYTTVISGFC---YLDEPELQWRSLQGTGRGLGP 217
I + + RG D VSY T+ISG C LDE + + RGL P
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM--VKRGLKP 573
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
KG+ P + T L L E K + +++ +G+SP V ++ ++A+C G +V
Sbjct: 220 KGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKG--GKV 276
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGF 195
E+AV + M + G++P+ V++ TVI G
Sbjct: 277 EEAVKLFSKMEEAGVAPNVVTFNTVIDGL 305
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAG-------------------NFESESALIVARC 54
+ ++ G++P ++ YN I GF + + S LI + C
Sbjct: 338 YNEMITRGIAPDTIT-YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYC 396
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
K K+V + L++ ++ KG+ PN ++ N ++ G C M +G+ P
Sbjct: 397 KAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVV 456
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILR 174
TY L LCD E +KA ++ +M ++ + IYN ++ C +V+ A +
Sbjct: 457 TYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC--NASKVDDAWSLFC 514
Query: 175 VMAKRGLSPDAVSYTTVISGFC---YLDEPELQWRSLQGTG 212
++ +G+ PD V+Y +I G C L E ++ +R ++ G
Sbjct: 515 SLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 4/158 (2%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
SALI KE K+ EA L+ M +G+ P+ ++ N++I G C M
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
KG PD TY L C D ++ E+ +GL P+ + YN LV +C + ++
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC--QSGKL 436
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQ 204
A + + M RG+ P V+Y ++ G C D EL
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLC--DNGELN 472
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S +I + CK+ +A L+ M KG++ ++V+ +++I GLC M
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+ + PD T+ +L + + +A ++ +EMI RG++P + YN L+ +C + +
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC--KENCL 366
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+A + +M +G PD V+Y+ +I+ +C
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYC 396
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 2/143 (1%)
Query: 54 CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDE 113
CK A L++ M ++ ++ ++V + VI LC M KG+ D
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280
Query: 114 NTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGIL 173
TY SL LC+ + D K+L EMI R + P VV ++ L+ + V E + +E A +
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF-VKEGKLLE-AKELY 338
Query: 174 RVMAKRGLSPDAVSYTTVISGFC 196
M RG++PD ++Y ++I GFC
Sbjct: 339 NEMITRGIAPDTITYNSLIDGFC 361
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 11/199 (5%)
Query: 29 IYNFRIRGFAGAGNFESE----SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
++ F + G A +E + S L+ C E +V EA L M + P+LV+ + +
Sbjct: 122 LFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTL 181
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
I GLC M G PDE TY + LC + A + +M R +
Sbjct: 182 INGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNI 241
Query: 145 SPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC---YLDEP 201
SVV Y+ ++ + C + + A+ + M +G+ D V+Y+++I G C D+
Sbjct: 242 KASVVQYSIVIDSLC--KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDG 299
Query: 202 ELQWRSLQGTGRGLGPPIV 220
R + GR + P +V
Sbjct: 300 AKMLREM--IGRNIIPDVV 316
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 20/159 (12%)
Query: 8 TATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESE-------------------SA 48
A + F+++ G+ PPSV Y + G G +
Sbjct: 437 NAAKELFQEMVSRGV-PPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
+I C KV +A+ L+ +++DKGV+P++V+ N +I GLC M G
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPS 147
TPD+ TY L + + +++ EM V G S
Sbjct: 556 CTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSAD 594
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 82/202 (40%), Gaps = 22/202 (10%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESAL---IVAR-------------- 53
++ FR+I G+ P ++ YN + GF +G + L +V+R
Sbjct: 405 MRLFREISSKGLIPNTIT-YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLD 463
Query: 54 --CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTP 111
C ++ +A +++ M + + N +I G+C ++ KG+ P
Sbjct: 464 GLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKP 523
Query: 112 DENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVG 171
D TY + LC + +A + +M G +P YN L+ A+ G + +V
Sbjct: 524 DVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGG--SGLISSVE 581
Query: 172 ILRVMAKRGLSPDAVSYTTVIS 193
++ M G S D+ + VI
Sbjct: 582 LIEEMKVCGFSADSSTIKMVID 603
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 83/176 (47%), Gaps = 7/176 (3%)
Query: 48 ALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRK 107
+L+ C+ +V +A ++ M G +PN+V N +I GLC M +
Sbjct: 156 SLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD 215
Query: 108 GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVE 167
G+ PD TY SL LC A +++S M R + P V +N L+ A CV E RV
Sbjct: 216 GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDA-CVKE-GRVS 273
Query: 168 KAVGILRVMAKRGLSPDAVSYTTVISGFCY---LDEPELQWRSLQGTGRGLGPPIV 220
+A M +R L PD V+Y+ +I G C LDE E + + +G P +V
Sbjct: 274 EAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM--VSKGCFPDVV 327
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 19/187 (10%)
Query: 10 TLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAM 69
L F Q+ G P +V IYN I G CK K+V A L M
Sbjct: 170 ALYMFDQMVGMGYKP-NVVIYNTIIDGL----------------CKSKQVDNALDLLNRM 212
Query: 70 TDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEA 129
G+ P++V+ N++I GLC M ++ + PD T+ +L
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRV 272
Query: 130 DKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYT 189
+A + EMI R L P +V Y+ L+ C+ R+++A + M +G PD V+Y+
Sbjct: 273 SEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM--YSRLDEAEEMFGFMVSKGCFPDVVTYS 330
Query: 190 TVISGFC 196
+I+G+C
Sbjct: 331 ILINGYC 337
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 8/185 (4%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S LI C ++ EA ++ M KG P++V+ + +I G C M++
Sbjct: 295 SLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+G+ + TY L Q C + + A ++ M+ G+ P+++ YN L+ C + ++
Sbjct: 355 RGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLC--DNGKI 412
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTG-RGLGPPIVLKFFF 225
EKA+ IL M K G+ D V+Y +I G C E W +GL P I +
Sbjct: 413 EKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDI-----W 467
Query: 226 TSTTM 230
T TTM
Sbjct: 468 TYTTM 472
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 17/192 (8%)
Query: 14 FRQIFRNGMS----PPSVNIYNFRI--RGFAGAGNFESESALIVARCKEKKVREAFGLWK 67
+R++ RNG+ S++++ + R +F S L+ A K KK LW+
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADF---SRLLSAISKMKKYDVVIYLWE 105
Query: 68 AMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRC 127
M G+ NL + N ++ C M + G P T+ SL C
Sbjct: 106 QMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC--- 162
Query: 128 EADKAYKVL---SEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPD 184
D+ Y L +M+ G P+VVIYN ++ C + ++V+ A+ +L M K G+ PD
Sbjct: 163 RGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC--KSKQVDNALDLLNRMEKDGIGPD 220
Query: 185 AVSYTTVISGFC 196
V+Y ++ISG C
Sbjct: 221 VVTYNSLISGLC 232
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S LI CK KKV L+ M+ +GV N V+ +IQG C M
Sbjct: 330 SILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF 389
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERER 165
G+ P+ TY L LCD + +KA +L++M G+ +V YN ++ C GE
Sbjct: 390 CGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGE--- 446
Query: 166 VEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
V A I + +GL PD +YTT++ G
Sbjct: 447 VADAWDIYCSLNCQGLMPDIWTYTTMMLGL 476
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 4/144 (2%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + + LI C+ K+ A +++ M GV PN+++ N ++ GLC
Sbjct: 360 NTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVIL 419
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNK-LVSAYCV 160
M + G+ D TY + + +C E A+ + + +GL P + Y ++ Y
Sbjct: 420 ADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKK 479
Query: 161 GERERVEKAVGILRVMAKRGLSPD 184
G R +A + R M + G+ P+
Sbjct: 480 GLR---READALFRKMKEDGILPN 500
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 3/173 (1%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
LI A C++ V A L M D+G P++V+ N ++ G+C M G
Sbjct: 245 LIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEK 168
P+ T+ + + +C A K+L++M+ +G SPSVV +N L++ C + + +
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC--RKGLLGR 362
Query: 169 AVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQG-TGRGLGPPIV 220
A+ IL M + G P+++SY ++ GFC + + L+ RG P IV
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 84/175 (48%), Gaps = 3/175 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ L+ CKE ++ EA M G +PN+++ N +++ +C M R
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 337
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
KG +P T+ L LC + +A +L +M G P+ + YN L+ +C + +++
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFC--KEKKM 395
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSL-QGTGRGLGPPIV 220
++A+ L M RG PD V+Y T+++ C + E L Q + +G P ++
Sbjct: 396 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLI 450
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 2/151 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ ++ A CK+ KV +A + ++ KG P L++ N VI GL M
Sbjct: 418 NTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
K L PD TY SL L + D+A K E G+ P+ V +N ++ C + +
Sbjct: 478 KDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC--KSRQT 535
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCY 197
++A+ L M RG P+ SYT +I G Y
Sbjct: 536 DRAIDFLVFMINRGCKPNETSYTILIEGLAY 566
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 21/190 (11%)
Query: 25 PSVNIYNFRIRGFAGAG-------------------NFESESALIVARCKEKKVREAFGL 65
P V YN + G G N + + ++ + C + +A L
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331
Query: 66 WKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCD 125
M KG P++V+ N +I LC M + G P+ +Y L C
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
Query: 126 RCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDA 185
+ D+A + L M+ RG P +V YN +++A C + +VE AV IL ++ +G SP
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALC--KDGKVEDAVEILNQLSSKGCSPVL 449
Query: 186 VSYTTVISGF 195
++Y TVI G
Sbjct: 450 ITYNTVIDGL 459
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 20/203 (9%)
Query: 12 KTFRQIFRNGMSPPSVN---IYNFRIR-GFAGAG--------------NFESESALIVAR 53
K + R G SP V + NF R G G N S + L+
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389
Query: 54 CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDE 113
CKEKK+ A + M +G P++V+ N ++ LC ++ KG +P
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVL 449
Query: 114 NTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGIL 173
TY ++ L + KA K+L EM + L P + Y+ LV + +V++A+
Sbjct: 450 ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG--LSREGKVDEAIKFF 507
Query: 174 RVMAKRGLSPDAVSYTTVISGFC 196
+ G+ P+AV++ +++ G C
Sbjct: 508 HEFERMGIRPNAVTFNSIMLGLC 530
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
Query: 58 KVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYM 117
++ E F + M G P+++ +I+G C + G PD TY
Sbjct: 117 ELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYN 176
Query: 118 SLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMA 177
+ C E + A VL M V SP VV YN ++ + C + ++++A+ +L M
Sbjct: 177 VMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLC--DSGKLKQAMEVLDRML 231
Query: 178 KRGLSPDAVSYTTVISGFC 196
+R PD ++YT +I C
Sbjct: 232 QRDCYPDVITYTILIEATC 250
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 20/153 (13%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAG-------------------NFESESALIV 51
++ Q+ G SP + YN I G A AG + + S+L+
Sbjct: 434 VEILNQLSSKGCSPVLIT-YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 52 ARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTP 111
+E KV EA + G+ PN V+ N+++ GLC M +G P
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKP 552
Query: 112 DENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
+E +Y L + L A +A ++L+E+ +GL
Sbjct: 553 NETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 20/195 (10%)
Query: 3 MRLSSTATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREA 62
M+L+ T T+ F + P +V ++N + F CKE + +A
Sbjct: 216 MKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKF----------------CKEGNISDA 259
Query: 63 FGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQL 122
++ +T + ++P +VS N +I G C M + PD TY +L
Sbjct: 260 QKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINA 319
Query: 123 LCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERERVEKAVGILRVMAKRGL 181
LC + D A+ + EM RGL P+ VI+ L+ + GE + ++++ + M +GL
Sbjct: 320 LCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKES---YQKMLSKGL 376
Query: 182 SPDAVSYTTVISGFC 196
PD V Y T+++GFC
Sbjct: 377 QPDIVLYNTLVNGFC 391
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 30/219 (13%)
Query: 12 KTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESE-------------------SALIVA 52
++++++ G+ P V +YN + GF G+ + + LI
Sbjct: 366 ESYQKMLSKGLQPDIV-LYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDG 424
Query: 53 RCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPD 112
C+ V A + K M G+E + V +A++ G+C M R G+ PD
Sbjct: 425 FCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPD 484
Query: 113 ENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGI 172
+ TY + C + +A +K+L EM G PSVV YN L++ C + +++ A +
Sbjct: 485 DVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLC--KLGQMKNADML 542
Query: 173 LRVMAKRGLSPDAVSYTTVISGFC--------YLDEPEL 203
L M G+ PD ++Y T++ G Y+ +PE+
Sbjct: 543 LDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEI 581
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 95/250 (38%), Gaps = 53/250 (21%)
Query: 12 KTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFE-------------------SESALIVA 52
K F +I + + P V+ +N I G+ GN + + SALI A
Sbjct: 261 KVFDEITKRSLQPTVVS-FNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINA 319
Query: 53 RCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPD 112
CKE K+ A GL+ M +G+ PN V +I G M KGL PD
Sbjct: 320 LCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPD 379
Query: 113 ENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG----------- 161
Y +L C + A ++ MI RGL P + Y L+ +C G
Sbjct: 380 IVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRK 439
Query: 162 ----------------------ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLD 199
+ RV A LR M + G+ PD V+YT ++ FC
Sbjct: 440 EMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKG 499
Query: 200 EPELQWRSLQ 209
+ + ++ L+
Sbjct: 500 DAQTGFKLLK 509
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 3/160 (1%)
Query: 63 FGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQL 122
+G + + D G N+ N ++ C + ++ L P ++ +L
Sbjct: 225 WGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLING 284
Query: 123 LCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLS 182
C D+ +++ +M P V Y+ L++A C + +++ A G+ M KRGL
Sbjct: 285 YCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALC--KENKMDGAHGLFDEMCKRGLI 342
Query: 183 PDAVSYTTVISGFCYLDEPELQWRSLQGT-GRGLGPPIVL 221
P+ V +TT+I G E +L S Q +GL P IVL
Sbjct: 343 PNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVL 382
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 79/150 (52%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+A+I CK+ A L+ M DKG+ P++++ + +I C M
Sbjct: 80 NAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIE 139
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+ + PD T+ +L L + +A ++ +M+ RG+ P+ + YN ++ +C +++R+
Sbjct: 140 RQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFC--KQDRL 197
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
A +L MA + SPD V+++T+I+G+C
Sbjct: 198 NDAKRMLDSMASKSCSPDVVTFSTLINGYC 227
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S +I + C+ + +A L + M ++ + P++V+ +A+I L M R
Sbjct: 115 SGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLR 174
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+G+ P TY S+ C + + A ++L M + SP VV ++ L++ YC + +RV
Sbjct: 175 RGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYC--KAKRV 232
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+ + I M +RG+ + V+YTT+I GFC
Sbjct: 233 DNGMEIFCEMHRRGIVANTVTYTTLIHGFC 262
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 4/151 (2%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
SALI A KE KV EA ++ M +G+ P ++ N++I G C M
Sbjct: 150 SALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMAS 209
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERER 165
K +PD T+ +L C D ++ EM RG+ + V Y L+ +C VG+
Sbjct: 210 KSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD--- 266
Query: 166 VEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
++ A +L VM G++P+ +++ ++++ C
Sbjct: 267 LDAAQDLLNVMISSGVAPNYITFQSMLASLC 297
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 2/175 (1%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
+I CK A L M + ++ ++V NA+I LC M+ KG
Sbjct: 47 IINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKG 106
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEK 168
+ PD TY + C A ++L +MI R ++P VV ++ L++A + + +V +
Sbjct: 107 IFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINA--LVKEGKVSE 164
Query: 169 AVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTGRGLGPPIVLKF 223
A I M +RG+ P ++Y ++I GFC D R L P V+ F
Sbjct: 165 AEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTF 219
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Query: 69 MTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCE 128
M + G P++V+ ++ GLC M +G P Y ++ LC +
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 129 ADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSY 188
+ A +LS+M + VVIYN ++ C A + M +G+ PD ++Y
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHI--HAQNLFTEMHDKGIFPDVITY 114
Query: 189 TTVISGFC----YLDEPELQWRSLQGTGRGLGPPIV 220
+ +I FC + D +L ++ R + P +V
Sbjct: 115 SGMIDSFCRSGRWTDAEQLLRDMIE---RQINPDVV 147
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 89/172 (51%), Gaps = 6/172 (3%)
Query: 29 IYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGL 88
+YN IR + A N + ++LI C E V EA ++ M KG P++V+ ++I G
Sbjct: 269 LYNEMIR-MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGF 327
Query: 89 CXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSV 148
C M++KGLT + TY +L Q + + A +V S M+ RG+ P++
Sbjct: 328 CKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNI 387
Query: 149 VIYNKLVSAYCVGERERVEKAVGILRVMAKR---GLSPDAVSYTTVISGFCY 197
YN L+ +C+ +V+KA+ I M KR G++P+ +Y ++ G CY
Sbjct: 388 RTYNVLL--HCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCY 437
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 3/174 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
++L+ C + R+A L + MT + ++P++++ NA+I M R
Sbjct: 216 TSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIR 275
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+ P+ TY SL C D+A ++ M +G P VV Y L++ +C + ++V
Sbjct: 276 MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFC--KCKKV 333
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSL-QGTGRGLGPPI 219
+ A+ I M+++GL+ + ++YTT+I GF + +P + RG+ P I
Sbjct: 334 DDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNI 387
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 76/150 (50%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ +I + CK V A L+ M + G+ P++V +++ GLC M +
Sbjct: 181 TTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTK 240
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+ + PD T+ +L + A ++ +EMI ++P++ Y L++ +C+ V
Sbjct: 241 RKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM--EGCV 298
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
++A + +M +G PD V+YT++I+GFC
Sbjct: 299 DEARQMFYLMETKGCFPDVVAYTSLINGFC 328
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 54 CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDE 113
C+ + A M G EP++V+ ++I G C M G+ PD
Sbjct: 118 CQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDV 177
Query: 114 NTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGIL 173
Y ++ LC + A + +M G+ P VV+Y LV+ C R R A +L
Sbjct: 178 VMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR--DADSLL 235
Query: 174 RVMAKRGLSPDAVSYTTVISGFC----YLDEPEL 203
R M KR + PD +++ +I F +LD EL
Sbjct: 236 RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEEL 269
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 2/151 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ALI A KE K +A L+ M + PN+ + ++I G C M
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMET 310
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
KG PD Y SL C + D A K+ EM +GL+ + + Y L+ + G+ +
Sbjct: 311 KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGF--GQVGKP 368
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCY 197
A + M RG+ P+ +Y ++ CY
Sbjct: 369 NVAQEVFSHMVSRGVPPNIRTYNVLLHCLCY 399
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
++LI C ++ EA + M + G++P++V +I LC M
Sbjct: 146 TSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMEN 205
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
G+ PD Y SL LC+ A +L M R + P V+ +N L+ A+ V E + +
Sbjct: 206 YGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF-VKEGKFL 264
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+ A + M + ++P+ +YT++I+GFC
Sbjct: 265 D-AEELYNEMIRMSIAPNIFTYTSLINGFC 293
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 85/209 (40%), Gaps = 15/209 (7%)
Query: 13 TFRQIFRNGMSPPSVN------IYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLW 66
+R+I RNG+ N + R +F + L+ K KK L
Sbjct: 39 NYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDF---TKLLNVIAKMKKFDVVINLC 95
Query: 67 KAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDR 126
+ GV +L + N ++ C M + G PD T+ SL C
Sbjct: 96 DHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLG 155
Query: 127 CEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAV 186
++A ++++M+ G+ P VV+Y ++ + C + V A+ + M G+ PD V
Sbjct: 156 NRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLC--KNGHVNYALSLFDQMENYGIRPDVV 213
Query: 187 SYTTVISGFCYLDEPELQWRSLQGTGRGL 215
YT++++G C +WR RG+
Sbjct: 214 MYTSLVNGLC----NSGRWRDADSLLRGM 238
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 36/185 (19%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
++LI CK KKV +A ++ M+ KG+ N ++ +IQG M
Sbjct: 321 TSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVS 380
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVR---GLSPSVVIYNKLVSAYCVG-- 161
+G+ P+ TY L LC + KA + +M R G++P++ YN L+ C
Sbjct: 381 RGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGK 440
Query: 162 ------------ERE-------------------RVEKAVGILRVMAKRGLSPDAVSYTT 190
+RE +V+ AV + + +G+ P+ V+YTT
Sbjct: 441 LEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTT 500
Query: 191 VISGF 195
+ISG
Sbjct: 501 MISGL 505
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 46 ESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMN 105
++ LI CK + V A + K M D+G+ PN+V+ +++I GLC M+
Sbjct: 51 DTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMD 110
Query: 106 RKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERER 165
K + P+ T+ +L R + K V MI + P+V Y+ L+ C+ R
Sbjct: 111 SKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCM--HNR 168
Query: 166 VEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
V++A+ +L +M +G +P+ V+Y+T+ +GF
Sbjct: 169 VDEAIKMLDLMISKGCTPNVVTYSTLANGF 198
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 87/177 (49%), Gaps = 3/177 (1%)
Query: 19 RNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNL 78
+N + P++ + R++ + N + S+LI CK ++ +A M K + PN+
Sbjct: 60 KNRLVVPALEVLK-RMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNV 118
Query: 79 VSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSE 138
++ +A+I M + + P+ TY SL LC D+A K+L
Sbjct: 119 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 178
Query: 139 MIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
MI +G +P+VV Y+ L + + + RV+ + +L M +RG++ + VS T+I G+
Sbjct: 179 MISKGCTPNVVTYSTLANGFF--KSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGY 233
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 2/154 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + SALI A K K+ + ++K M ++PN+ + +++I GLC
Sbjct: 117 NVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKML 176
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M KG TP+ TY +L D K+L +M RG++ + V N L+ Y
Sbjct: 177 DLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYF-- 234
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+ +++ A+G+ M GL P+ SY V++G
Sbjct: 235 QAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGL 268
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 83/177 (46%), Gaps = 3/177 (1%)
Query: 45 SESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXM 104
+ S+L+ C +++A + M G++ ++V +I LC M
Sbjct: 15 TASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRM 74
Query: 105 NRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERE 164
+G++P+ TY SL LC A + L EM + ++P+V+ ++ L+ AY +R
Sbjct: 75 KDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAY--AKRG 132
Query: 165 RVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQ-GTGRGLGPPIV 220
++ K + ++M + + P+ +Y+++I G C + + + L +G P +V
Sbjct: 133 KLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVV 189
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Query: 69 MTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCE 128
M G+EP++V++++++ G C M + G+ D L LC
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 129 ADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSY 188
A +VL M RG+SP+VV Y+ L++ C + R+ A L M + ++P+ +++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLC--KSGRLADAERRLHEMDSKKINPNVITF 121
Query: 189 TTVISGF 195
+ +I +
Sbjct: 122 SALIDAY 128
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 73/150 (48%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ LI A + + EAF L AM KG P + + N VI GLC M R
Sbjct: 274 NTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR 333
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
GL+PD TY SL C + + + KV S+M R + P +V ++ ++S + +
Sbjct: 334 SGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFT--RSGNL 391
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+KA+ + + GL PD V YT +I G+C
Sbjct: 392 DKALMYFNSVKEAGLIPDNVIYTILIQGYC 421
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 30 YNFRIRGFAGAGNFE-------------------SESALIVARCKEKKVREAFGLWKAMT 70
YN + GF G+ + S S L+ A C + + EAF +W M
Sbjct: 518 YNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMI 577
Query: 71 DKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEAD 130
K ++P ++ N++I+G C M +G PD +Y +L
Sbjct: 578 SKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMS 637
Query: 131 KAYKVLSEMIVR--GLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSY 188
KA+ ++ +M GL P V YN ++ +C + ++++A +LR M +RG++PD +Y
Sbjct: 638 KAFGLVKKMEEEQGGLVPDVFTYNSILHGFC--RQNQMKEAEVVLRKMIERGVNPDRSTY 695
Query: 189 TTVISGFCYLDEPELQWR-SLQGTGRGLGP 217
T +I+GF D +R + RG P
Sbjct: 696 TCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 5/184 (2%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIV-ARCKEKKVREAFGLWKAMTDK 72
R I R+G+S + I N F+ G+ +S L++ + +K+REA + + K
Sbjct: 137 LRMIRRSGVS--RLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSK 194
Query: 73 GVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKA 132
G ++ + NA+I L ++R G+ + T + LC + +K
Sbjct: 195 GFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKV 254
Query: 133 YKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVI 192
LS++ +G+ P +V YN L+SAY + +E+A ++ M +G SP +Y TVI
Sbjct: 255 GTFLSQVQEKGVYPDIVTYNTLISAY--SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVI 312
Query: 193 SGFC 196
+G C
Sbjct: 313 NGLC 316
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 83/165 (50%), Gaps = 4/165 (2%)
Query: 32 FRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXX 91
R +GF + ++ +ALI + + V A+G+++ ++ GV N+ + N ++ LC
Sbjct: 191 LRSKGFTVS--IDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKD 248
Query: 92 XXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIY 151
+ KG+ PD TY +L + ++A+++++ M +G SP V Y
Sbjct: 249 GKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTY 308
Query: 152 NKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
N +++ C + + E+A + M + GLSPD+ +Y +++ C
Sbjct: 309 NTVINGLC--KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEAC 351
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 91/231 (39%), Gaps = 31/231 (13%)
Query: 12 KTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVR----------E 61
K F ++ + P S + I G GN ++ L + KEK++R +
Sbjct: 466 KLFNEMTERALFPDSYTL-TILIDGHCKLGNLQNAMELF-QKMKEKRIRLDVVTYNTLLD 523
Query: 62 AFG----------LWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTP 111
FG +W M K + P +S + ++ LC M K + P
Sbjct: 524 GFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583
Query: 112 DENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVG 171
S+ + C A L +MI G P + YN L+ + E + KA G
Sbjct: 584 TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFV--REENMSKAFG 641
Query: 172 ILRVMAKR--GLSPDAVSYTTVISGFC---YLDEPELQWRSLQGTGRGLGP 217
+++ M + GL PD +Y +++ GFC + E E+ R + RG+ P
Sbjct: 642 LVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKM--IERGVNP 690
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 81/187 (43%), Gaps = 19/187 (10%)
Query: 12 KTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTD 71
+ F ++ R+G+SP S + +L++ CK+ V E ++ M
Sbjct: 326 EVFAEMLRSGLSPDST-----------------TYRSLLMEACKKGDVVETEKVFSDMRS 368
Query: 72 KGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADK 131
+ V P+LV ++++ + GL PD Y L Q C +
Sbjct: 369 RDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISV 428
Query: 132 AYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTV 191
A + +EM+ +G + VV YN ++ C +R+ + +A + M +R L PD+ + T +
Sbjct: 429 AMNLRNEMLQQGCAMDVVTYNTILHGLC--KRKMLGEADKLFNEMTERALFPDSYTLTIL 486
Query: 192 ISGFCYL 198
I G C L
Sbjct: 487 IDGHCKL 493
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 21/144 (14%)
Query: 25 PSVNIYNFRIRGFAGAGNFE-------------------SESALIVARCKEKKVREAFGL 65
P+V I N I+G+ +GN S + LI +E+ + +AFGL
Sbjct: 583 PTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGL 642
Query: 66 WKAMTDK--GVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLL 123
K M ++ G+ P++ + N+++ G C M +G+ PD +TY +
Sbjct: 643 VKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGF 702
Query: 124 CDRCEADKAYKVLSEMIVRGLSPS 147
+ +A+++ EM+ RG SP
Sbjct: 703 VSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 86/205 (41%), Gaps = 22/205 (10%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAG------NFESE-------------SALIV 51
L F + G+ P +V IY I+G+ G N +E + ++
Sbjct: 395 LMYFNSVKEAGLIPDNV-IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILH 453
Query: 52 ARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTP 111
CK K + EA L+ MT++ + P+ + +I G C M K +
Sbjct: 454 GLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRL 513
Query: 112 DENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVG 171
D TY +L + D A ++ ++M+ + + P+ + Y+ LV+A C + + +A
Sbjct: 514 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC--SKGHLAEAFR 571
Query: 172 ILRVMAKRGLSPDAVSYTTVISGFC 196
+ M + + P + ++I G+C
Sbjct: 572 VWDEMISKNIKPTVMICNSMIKGYC 596
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 7/151 (4%)
Query: 45 SESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXM 104
S S LI KE V EA GL M +GVEPNL++ A+I+GLC +
Sbjct: 279 SYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRI 338
Query: 105 NRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERE 164
G+ DE Y++L +C + ++A+ +L +M RG+ PS++ YN +++ C+ R
Sbjct: 339 LSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRV 398
Query: 165 RVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
V +G+ D ++Y+T++ +
Sbjct: 399 SEADEV-------SKGVVGDVITYSTLLDSY 422
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ +I CKE + +A L +GV N ++ N++I GLC +
Sbjct: 659 TIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLEN 718
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERER 165
GL P E TY L LC A K+L M+ +GL P+++IYN +V YC +G+ E
Sbjct: 719 IGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTED 778
Query: 166 VEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+ V R M R ++PDA + +++I G+C
Sbjct: 779 AMRVVS--RKMMGR-VTPDAFTVSSMIKGYC 806
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 15/163 (9%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGV-EPNLVSSNAVIQGLCXXXXXXXXXXXXXXMN 105
SA+I CK K A G +++ D GV PNLV+ ++ LC +
Sbjct: 175 SAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLE 234
Query: 106 RKGLTPDENTYMSLFQ------LLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC 159
+G D Y + L D D+ EM+ +G++ VV Y+ L+
Sbjct: 235 DEGFEFDCVFYSNWIHGYFKGGALVDALMQDR------EMVEKGMNRDVVSYSILIDG-- 286
Query: 160 VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPE 202
+ + VE+A+G+L M K G+ P+ ++YT +I G C + + E
Sbjct: 287 LSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLE 329
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 66/130 (50%), Gaps = 2/130 (1%)
Query: 67 KAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDR 126
+ M +KG+ ++VS + +I GL M ++G+ P+ TY ++ + LC
Sbjct: 266 REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKM 325
Query: 127 CEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAV 186
+ ++A+ + + ++ G+ +Y L+ C + + +A +L M +RG+ P +
Sbjct: 326 GKLEEAFVLFNRILSVGIEVDEFLYVTLIDGIC--RKGNLNRAFSMLGDMEQRGIQPSIL 383
Query: 187 SYTTVISGFC 196
+Y TVI+G C
Sbjct: 384 TYNTVINGLC 393
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 70/150 (46%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
++LI C++ + EA L+ ++ + G+ P+ V+ +I LC M
Sbjct: 694 NSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVS 753
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
KGL P+ Y S+ C + + A +V+S ++ ++P + ++ YC ++ +
Sbjct: 754 KGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYC--KKGDM 811
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
E+A+ + + +S D + +I GFC
Sbjct: 812 EEALSVFTEFKDKNISADFFGFLFLIKGFC 841
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 2/155 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + + L+ A C+ KV E L + + D+G E + V + I G
Sbjct: 206 NLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQD 265
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M KG+ D +Y L L ++A +L +MI G+ P+++ Y ++ C
Sbjct: 266 REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLC-- 323
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+ ++E+A + + G+ D Y T+I G C
Sbjct: 324 KMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGIC 358
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 2/130 (1%)
Query: 77 NLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVL 136
+++ +I GLC +G+T + TY SL LC + +A ++
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 137 SEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+ GL PS V Y L+ C + A +L M +GL P+ + Y +++ G+C
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLC--KEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYC 771
Query: 197 YLDEPELQWR 206
L + E R
Sbjct: 772 KLGQTEDAMR 781
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
Query: 47 SALIVAR-CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMN 105
S IV R CK+ A L+ M +KG+ PN+++ N +I C M
Sbjct: 13 STAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMI 72
Query: 106 RKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERER 165
K + PD T+ +L + +A ++ EM+ + P+ + YN ++ +C +++R
Sbjct: 73 EKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC--KQDR 130
Query: 166 VEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
V+ A +L MA +G SPD V+++T+I+G+C
Sbjct: 131 VDDAKRMLDSMASKGCSPDVVTFSTLINGYC 161
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 24/203 (11%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESE-------------------SALIVARC 54
F ++ G+ P +V YN I F +G + SALI A
Sbjct: 33 FTEMHEKGIFP-NVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFV 91
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
KE+KV EA ++K M + P ++ N++I G C M KG +PD
Sbjct: 92 KERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVV 151
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERERVEKAVGIL 173
T+ +L C D ++ EM RG+ + V Y L+ +C VG+ ++ A +L
Sbjct: 152 TFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD---LDAAQDLL 208
Query: 174 RVMAKRGLSPDAVSYTTVISGFC 196
M G++PD +++ +++G C
Sbjct: 209 NEMISCGVAPDYITFHCMLAGLC 231
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 69 MTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCE 128
M ++ ++V S A++ LC M+ KG+ P+ TY + C
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 129 ADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSY 188
A ++L MI + ++P +V ++ L++A+ V ER +V +A I + M + + P ++Y
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAF-VKER-KVSEAEEIYKEMLRWSIFPTTITY 118
Query: 189 TTVISGFCYLDEPELQWRSLQG-TGRGLGPPIV 220
++I GFC D + R L +G P +V
Sbjct: 119 NSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVV 151
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 5/150 (3%)
Query: 58 KVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYM 117
VR+A + M + G+ PN+ + N +I+GL M +G+ PD+ TY
Sbjct: 728 HVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYN 787
Query: 118 SLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERERVEKAVGILRVM 176
+L + + EMI GL P YN L+S + VG ++ +A +L+ M
Sbjct: 788 ALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVG---KMLQARELLKEM 844
Query: 177 AKRGLSPDAVSYTTVISGFCYL-DEPELQW 205
KRG+SP+ +Y T+ISG C L P+++W
Sbjct: 845 GKRGVSPNTSTYCTMISGLCKLCTHPDVEW 874
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 72/154 (46%), Gaps = 2/154 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + + L+ + K R A L+ M +G+ +LV ++ GL
Sbjct: 293 NHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTF 352
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
+ P+ TY +L LC + A ++++M+ + + P+VV Y+ +++ Y
Sbjct: 353 KMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYV-- 410
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
++ +E+AV +LR M + + P+ +Y TVI G
Sbjct: 411 KKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGL 444
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 83/194 (42%), Gaps = 17/194 (8%)
Query: 16 QIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGL---------- 65
++ + G+ P +V+ YN I GF GNF AL+ + + L
Sbjct: 186 EMVKMGILPDTVS-YNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIE 244
Query: 66 --WKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLL 123
++ M G +P++V+ +++I LC M + P+ TY +L L
Sbjct: 245 EAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSL 304
Query: 124 CDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSA-YCVGERERVEKAVGILRVMAKRGLS 182
A + S+M+VRG+ +V+Y L+ + G+ EK +++ +
Sbjct: 305 FKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKT---FKMLLEDNQV 361
Query: 183 PDAVSYTTVISGFC 196
P+ V+YT ++ G C
Sbjct: 362 PNVVTYTALVDGLC 375
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 77/198 (38%), Gaps = 44/198 (22%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
P ++N I F G + +LI ++ M GV P++ + N +
Sbjct: 91 PDSRLWNSLIHQFNVNGLVHDQVSLIYSK---------------MIACGVSPDVFALNVL 135
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
I C + + ++ D TY ++ LC+ AD+AY+ LSEM+ G+
Sbjct: 136 IHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGI 192
Query: 145 SPSVVIYNKLVSAYC-VGERERVEKAVGIL-------------------------RVMAK 178
P V YN L+ +C VG R + V + R M
Sbjct: 193 LPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVM 252
Query: 179 RGLSPDAVSYTTVISGFC 196
G PD V+++++I+ C
Sbjct: 253 SGFDPDVVTFSSIINRLC 270
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 61/166 (36%), Gaps = 37/166 (22%)
Query: 65 LWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYM------- 117
LW M G++P+L+S N V+ LC M + P+ TY
Sbjct: 595 LWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSS 654
Query: 118 ----------------------------SLFQLLCDRCEADKAYKVLSEMIVRGLSPSVV 149
+L LC KA V+ +M RG P V
Sbjct: 655 KHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTV 714
Query: 150 IYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+N L+ Y VG V KA+ VM + G+SP+ +Y T+I G
Sbjct: 715 TFNSLMHGYFVG--SHVRKALSTYSVMMEAGISPNVATYNTIIRGL 758
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 57/141 (40%), Gaps = 4/141 (2%)
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
K K+ F + + G++ + N +I LC M +G PD
Sbjct: 655 KHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTV 714
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERERVEKAVGIL 173
T+ SL KA S M+ G+SP+V YN ++ G + V+K L
Sbjct: 715 TFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKW---L 771
Query: 174 RVMAKRGLSPDAVSYTTVISG 194
M RG+ PD +Y +ISG
Sbjct: 772 SEMKSRGMRPDDFTYNALISG 792
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 108 GLTPDENTYMSLF-QLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERER 165
G+ PD + SL Q + D+ + S+MI G+SP V N L+ ++C VG R
Sbjct: 88 GVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVG---R 144
Query: 166 VEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+ A+ +LR R +S D V+Y TVISG C
Sbjct: 145 LSFAISLLR---NRVISIDTVTYNTVISGLC 172
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ +I C+ EA+ M G+ P+ VS N +I G C ++
Sbjct: 165 NTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISE 224
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
L T+ L + ++AY+ +M++ G P VV ++ +++ C G +V
Sbjct: 225 LNLI----THTILLSSYYNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCKG--GKV 275
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+ +LR M + + P+ V+YTT++
Sbjct: 276 LEGGLLLREMEEMSVYPNHVTYTTLVDSL 304
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 87/229 (37%), Gaps = 26/229 (11%)
Query: 12 KTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESE-------------------SALIVA 52
KTF+ + + P+V Y + G AG+ S S++I
Sbjct: 350 KTFKMLLEDN-QVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMING 408
Query: 53 RCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPD 112
K+ + EA L + M D+ V PN + VI GL M G+ +
Sbjct: 409 YVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGV--E 466
Query: 113 ENTYM--SLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAV 170
EN Y+ +L L + ++ +M+ +G++ + Y L+ + G E A
Sbjct: 467 ENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAW 526
Query: 171 GILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTGRGLGPPI 219
M +RG+ D VSY +ISG + W +G+ P I
Sbjct: 527 --AEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDI 573
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 92/178 (51%), Gaps = 3/178 (1%)
Query: 19 RNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNL 78
+ G + ++N+ N ++ N S +I + CK + +A L+ M +KGV PN+
Sbjct: 230 KRGDTDLALNLLN-KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNV 288
Query: 79 VSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSE 138
++ +++I LC M + + P+ T+ +L + + KA K+ E
Sbjct: 289 ITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEE 348
Query: 139 MIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
MI R + P++ Y+ L++ +C+ +R+ +A +L +M ++ P+ V+Y T+I+GFC
Sbjct: 349 MIKRSIDPNIFTYSSLINGFCM--LDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFC 404
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 48 ALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRK 107
A++ CK A L M +E N+V + VI LC M K
Sbjct: 223 AVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 282
Query: 108 GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVE 167
G+ P+ TY SL LC+ A ++LS+MI R ++P++V ++ L+ A+ ++ ++
Sbjct: 283 GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFV--KKGKLV 340
Query: 168 KAVGILRVMAKRGLSPDAVSYTTVISGFCYLD 199
KA + M KR + P+ +Y+++I+GFC LD
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLD 372
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + S+LI C + +A L M ++ + PNLV+ +A+I
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M ++ + P+ TY SL C +A ++L MI + P+VV YN L++ +C
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFC-- 404
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+ +RV+K + + R M++RGL + V+YTT+I GF
Sbjct: 405 KAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF 438
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 2/155 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + S+LI C ++ EA + + M K PN+V+ N +I G C
Sbjct: 357 NIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELF 416
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M+++GL + TY +L + D A V +M+ G+ P+++ YN L+ C
Sbjct: 417 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC-- 474
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+ ++ KA+ + + + + PD +Y +I G C
Sbjct: 475 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 509
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 2/155 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + SALI A K+ K+ +A L++ M + ++PN+ + +++I G C
Sbjct: 322 NLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQML 381
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M RK P+ TY +L C DK ++ EM RGL + V Y L+ +
Sbjct: 382 ELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFF-- 439
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+ + A + + M G+ P+ ++Y ++ G C
Sbjct: 440 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 474
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 3/182 (1%)
Query: 40 AGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXX 99
+ N + + LI C+ ++ A L M G EP++V+ N+++ G C
Sbjct: 110 SHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVA 169
Query: 100 XXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC 159
M G PD T+ +L L +A +A ++ M+ RG P +V Y +V+ C
Sbjct: 170 LVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLC 229
Query: 160 VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC-YLDEPELQWRSLQGTGRGLGPP 218
+R + A+ +L M + + V Y+TVI C Y E + + +G+ P
Sbjct: 230 --KRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 287
Query: 219 IV 220
++
Sbjct: 288 VI 289
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 85/196 (43%), Gaps = 4/196 (2%)
Query: 1 MSMRLSSTATLKTFRQIFRNGMSPPSVNIYNF-RIRGFAGAGNFESESALIVARCKEKKV 59
M ++SS+A R + G + ++F R R F+G +++ L + ++
Sbjct: 1 MLAKISSSAKRFVHRSLVVRGNAATFPLSFSFCRRRAFSGKTSYDYREVLRTG-LSDIEL 59
Query: 60 REAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSL 119
+A GL+ M P+++ + ++ + M G++ + TY L
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 120 FQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKR 179
C A +L +M+ G P +V N L++ +C G R+ AV ++ M +
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG--NRISDAVALVDQMVEM 177
Query: 180 GLSPDAVSYTTVISGF 195
G PD V++TT+I G
Sbjct: 178 GYKPDTVTFTTLIHGL 193
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 11/216 (5%)
Query: 8 TATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWK 67
TA + TF + G + N+Y IR + N + ++LI C + +A ++
Sbjct: 258 TALIDTF---VKEGNLLEARNLYKEMIRR-SVVPNVFTYNSLINGFCIHGCLGDAKYMFD 313
Query: 68 AMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRC 127
M KG P++V+ N +I G C M +GL D TY +L C
Sbjct: 314 LMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAG 373
Query: 128 EADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVS 187
+ + A KV + M+ G+SP +V YN L+ C+ ++EKA+ ++ + K + D ++
Sbjct: 374 KLNVAQKVFNRMVDCGVSPDIVTYNILLD--CLCNNGKIEKALVMVEDLQKSEMDVDIIT 431
Query: 188 YTTVISGFCYLDEPELQW---RSLQGTGRGLGPPIV 220
Y +I G C D+ + W RSL T +G+ P +
Sbjct: 432 YNIIIQGLCRTDKLKEAWCLFRSL--TRKGVKPDAI 465
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 21/191 (10%)
Query: 25 PSVNIYNFRIRGFAGAG-------------------NFESESALIVARCKEKKVREAFGL 65
P+V YN I GF G + + + LI CK K+V + L
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 346
Query: 66 WKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCD 125
+ MT +G+ + + N +I G C M G++PD TY L LC+
Sbjct: 347 FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 406
Query: 126 RCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDA 185
+ +KA ++ ++ + ++ YN ++ C +++++A + R + ++G+ PDA
Sbjct: 407 NGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC--RTDKLKEAWCLFRSLTRKGVKPDA 464
Query: 186 VSYTTVISGFC 196
++Y T+ISG C
Sbjct: 465 IAYITMISGLC 475
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 2/149 (1%)
Query: 48 ALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRK 107
+L+ C+ + +EA L +M G PN+V N VI GLC M +K
Sbjct: 154 SLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKK 213
Query: 108 GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVE 167
G+ D TY +L L + A ++L +M+ R + P+V+ + L+ + V E +E
Sbjct: 214 GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF-VKEGNLLE 272
Query: 168 KAVGILRVMAKRGLSPDAVSYTTVISGFC 196
A + + M +R + P+ +Y ++I+GFC
Sbjct: 273 -ARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 2/161 (1%)
Query: 36 GFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXX 95
GF N + +I CK + + A ++ M KG+ + V+ N +I GL
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236
Query: 96 XXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLV 155
M ++ + P+ + +L +A + EMI R + P+V YN L+
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296
Query: 156 SAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+ +C+ + A + +M +G PD V+Y T+I+GFC
Sbjct: 297 NGFCI--HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFC 335
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 65 LWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLC 124
L+ M + G+ +L S +I C M + G P T SL C
Sbjct: 101 LYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFC 160
Query: 125 DRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPD 184
+A ++ M G P+VVIYN +++ C + + A+ + M K+G+ D
Sbjct: 161 QGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLC--KNRDLNNALEVFYCMEKKGIRAD 218
Query: 185 AVSYTTVISGF 195
AV+Y T+ISG
Sbjct: 219 AVTYNTLISGL 229
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 3/175 (1%)
Query: 22 MSPPSVNIYNF-RIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVS 80
M+ + IY + ++ + + S + LI C+ ++ A L M G P++V+
Sbjct: 92 MNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVT 151
Query: 81 SNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMI 140
+++ G C M+ G P+ Y ++ LC + + A +V M
Sbjct: 152 LGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCME 211
Query: 141 VRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+G+ V YN L+S + R A +LR M KR + P+ + +T +I F
Sbjct: 212 KKGIRADAVTYNTLISG--LSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 264
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 25 PSVNIYNFRIRGFAGA-------------------GNFESESALIVARCKEKKVREAFGL 65
P V YN I GF + G+ + + LI C+ K+ A +
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 66 WKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCD 125
+ M D GV P++V+ N ++ LC + + + D TY + Q LC
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441
Query: 126 RCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDA 185
+ +A+ + + +G+ P + Y ++S C +R +A + R M + G P
Sbjct: 442 TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQR--EADKLCRRMKEDGFMPSE 499
Query: 186 VSY 188
Y
Sbjct: 500 RIY 502
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 98/228 (42%), Gaps = 23/228 (10%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFE-------------------SESALIVARC 54
F ++ G+ P +V YN I GF G + + +ALI C
Sbjct: 285 FEEMKFRGLVPDTVT-YNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFC 343
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
K K+ ++ M G++PN+VS + ++ C M R GL P+E
Sbjct: 344 KFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEY 403
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILR 174
TY SL C A+++ +EM+ G+ +VV Y L+ C + ER+++A +
Sbjct: 404 TYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC--DAERMKEAEELFG 461
Query: 175 VMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSL-QGTGRGLGPPIVL 221
M G+ P+ SY +I GF + L + GRG+ P ++L
Sbjct: 462 KMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 509
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAG-------------------NFESESALIV 51
L+ +R++ NG+ P V+ Y+ + F G N + ++LI
Sbjct: 352 LEFYREMKGNGLKPNVVS-YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Query: 52 ARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTP 111
A CK + +AF L M GVE N+V+ A+I GLC M+ G+ P
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470
Query: 112 DENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVG 171
+ +Y +L D+A ++L+E+ RG+ P +++Y + C E++E A
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLC--SLEKIEAAKV 528
Query: 172 ILRVMAKRGLSPDAVSYTTVISGF 195
++ M + G+ +++ YTT++ +
Sbjct: 529 VMNEMKECGIKANSLIYTTLMDAY 552
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 18/193 (9%)
Query: 4 RLSSTATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAF 63
+L T +K F + + P+V YN +I CKE V A
Sbjct: 239 KLGKTDDVKRFFKDMIGAGARPTVFTYNI----------------MIDCMCKEGDVEAAR 282
Query: 64 GLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLL 123
GL++ M +G+ P+ V+ N++I G M PD TY +L
Sbjct: 283 GLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCF 342
Query: 124 CDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSP 183
C + + EM GL P+VV Y+ LV A+C + +++A+ M + GL P
Sbjct: 343 CKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFC--KEGMMQQAIKFYVDMRRVGLVP 400
Query: 184 DAVSYTTVISGFC 196
+ +YT++I C
Sbjct: 401 NEYTYTSLIDANC 413
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 64/165 (38%), Gaps = 7/165 (4%)
Query: 59 VREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMS 118
+ EA + M V P S N ++ M G P TY
Sbjct: 208 LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNI 267
Query: 119 LFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAK 178
+ +C + + A + EM RGL P V YN ++ + G+ R++ V M
Sbjct: 268 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF--GKVGRLDDTVCFFEEMKD 325
Query: 179 RGLSPDAVSYTTVISGFCYLDEPELQ---WRSLQGTGRGLGPPIV 220
PD ++Y +I+ FC + + +R ++G GL P +V
Sbjct: 326 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGN--GLKPNVV 368
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 3/162 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N S +ALI K K + A L + +G++P+L+ I GLC
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVM 530
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M G+ + Y +L + +L EM + +VV + L+ C
Sbjct: 531 NEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC-- 588
Query: 162 ERERVEKAVGIL-RVMAKRGLSPDAVSYTTVISGFCYLDEPE 202
+ + V KAV R+ GL +A +T +I G C ++ E
Sbjct: 589 KNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVE 630
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 3/146 (2%)
Query: 48 ALIVARCKEKKVREAFGLWKAMT-DKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
LI CK K V +A + ++ D G++ N A+I GLC M +
Sbjct: 582 VLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQ 641
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
KGL PD Y SL + +A + +M G+ ++ Y LV + + ++
Sbjct: 642 KGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLV--WGLSHCNQL 699
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVI 192
+KA L M G+ PD V +V+
Sbjct: 700 QKARSFLEEMIGEGIHPDEVLCISVL 725
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 83/186 (44%), Gaps = 23/186 (12%)
Query: 15 RQIF----RNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMT 70
RQ+F RNG P V IY I GF CK K+V + ++ M+
Sbjct: 313 RQMFYLMERNGCYPNEV-IYTTLIHGF----------------CKSKRVEDGMKIFYEMS 355
Query: 71 DKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEAD 130
KGV N ++ +IQG C M+ + PD TY L LC + +
Sbjct: 356 QKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVE 415
Query: 131 KAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTT 190
KA + M R + ++V Y ++ C + +VE A + + +G+ P+ ++YTT
Sbjct: 416 KALMIFEYMRKREMDINIVTYTIIIQGMC--KLGKVEDAFDLFCSLFSKGMKPNVITYTT 473
Query: 191 VISGFC 196
+ISGFC
Sbjct: 474 MISGFC 479
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMT 70
++ F Q+ NG S P+V YN AL+ C+ + +A L + M
Sbjct: 208 VELFNQMGTNG-SRPNVVTYN----------------ALVTGLCEIGRWGDAAWLLRDMM 250
Query: 71 DKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEAD 130
+ +EPN+++ A+I M + + PD TY SL LC D
Sbjct: 251 KRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLD 310
Query: 131 KAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTT 190
+A ++ M G P+ VIY L+ +C + +RVE + I M+++G+ + ++YT
Sbjct: 311 EARQMFYLMERNGCYPNEVIYTTLIHGFC--KSKRVEDGMKIFYEMSQKGVVANTITYTV 368
Query: 191 VISGFCYLDEPELQWRSLQGTGRGLGPP 218
+I G+C + P++ PP
Sbjct: 369 LIQGYCLVGRPDVAQEVFNQMSSRRAPP 396
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 7/170 (4%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
++L+ C ++ +A L+ + G +PN+V+ +I+ LC M
Sbjct: 157 TSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGT 216
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERER 165
G P+ TY +L LC+ A +L +M+ R + P+V+ + L+ A+ VG +
Sbjct: 217 NGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVG---K 273
Query: 166 VEKAVGILRVMAKRGLSPDAVSYTTVISGFC---YLDEPELQWRSLQGTG 212
+ +A + VM + + PD +Y ++I+G C LDE + ++ G
Sbjct: 274 LMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 80/190 (42%), Gaps = 11/190 (5%)
Query: 13 TFRQIFRNGMSP----PSVNIYNFRI--RGFAGAGNFESESALIVARCKEKKVREAFGLW 66
++R+I RNG+ +++++ + R +F ++I K + L+
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIA---KMNRYDVVISLF 106
Query: 67 KAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDR 126
+ M G+ P L + N V+ +C M + G PD T+ SL C
Sbjct: 107 EQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHW 166
Query: 127 CEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAV 186
+ A + +++ G P+VV Y L+ C+ + + AV + M G P+ V
Sbjct: 167 NRIEDAIALFDQILGMGFKPNVVTYTTLIR--CLCKNRHLNHAVELFNQMGTNGSRPNVV 224
Query: 187 SYTTVISGFC 196
+Y +++G C
Sbjct: 225 TYNALVTGLC 234
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 2/162 (1%)
Query: 41 GNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXX 100
G+ ++ + L+ K KV +A +++ M KG+ P++ S +I G
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 101 XXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCV 160
M +GLTP+ Y L C E +KA ++L EM V+GL P+ V Y ++ YC
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYC- 708
Query: 161 GERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPE 202
+ + +A + M +GL PD+ YTT++ G C L++ E
Sbjct: 709 -KSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Query: 50 IVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGL 109
I KE + +A L+ M G+ P + ++I+G C M ++ +
Sbjct: 354 ICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNI 413
Query: 110 TPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKA 169
TY ++ + +C + D AY ++ EMI G P+VVIY L+ + + R A
Sbjct: 414 VISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFL--QNSRFGDA 471
Query: 170 VGILRVMAKRGLSPDAVSYTTVISGF 195
+ +L+ M ++G++PD Y ++I G
Sbjct: 472 MRVLKEMKEQGIAPDIFCYNSLIIGL 497
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 90/211 (42%), Gaps = 24/211 (11%)
Query: 12 KTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTD 71
+ FR++ G++P V Y I GF+ GN + S++ + M +
Sbjct: 613 EIFREMRGKGIAP-DVFSYGVLINGFSKLGNMQKASSI----------------FDEMVE 655
Query: 72 KGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADK 131
+G+ PN++ N ++ G C M+ KGL P+ TY ++ C + +
Sbjct: 656 EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAE 715
Query: 132 AYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTV 191
A+++ EM ++GL P +Y LV C VE+A+ I K+G + + +
Sbjct: 716 AFRLFDEMKLKGLVPDSFVYTTLVDGCC--RLNDVERAITIFGT-NKKGCASSTAPFNAL 772
Query: 192 ISGFCYLDEPELQW----RSLQGTGRGLGPP 218
I+ + EL+ R + G+ G P
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 85/217 (39%), Gaps = 56/217 (25%)
Query: 16 QIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVE 75
++ NG+ P + Y I G+ A F S +K V+E M + GV
Sbjct: 512 EMVENGLKPNAFT-YGAFISGYIEASEFAS---------ADKYVKE-------MRECGVL 554
Query: 76 PNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEAD----- 130
PN V +I C M +G+ D TY L L + D
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614
Query: 131 ------------------------------KAYKVLSEMIVRGLSPSVVIYNKLVSAYC- 159
KA + EM+ GL+P+V+IYN L+ +C
Sbjct: 615 FREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCR 674
Query: 160 VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
GE +EKA +L M+ +GL P+AV+Y T+I G+C
Sbjct: 675 SGE---IEKAKELLDEMSVKGLHPNAVTYCTIIDGYC 708
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Query: 44 ESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXX 103
++ ++LI C+EK VR+ + L M + + + + V++G+C
Sbjct: 383 QAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKE 442
Query: 104 MNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGER 163
M G P+ Y +L + A +VL EM +G++P + YN L+ + +
Sbjct: 443 MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG--LSKA 500
Query: 164 ERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+R+++A L M + GL P+A +Y ISG+
Sbjct: 501 KRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 78/177 (44%), Gaps = 9/177 (5%)
Query: 26 SVNIYNFRIRGFAGAGNFESESALIVARCKEKK-----VREAFGLWKAMTDKGVEPNLVS 80
V Y+ I AGN + ++ KE + V A L ++M KG+ P +
Sbjct: 220 DVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYT 279
Query: 81 SNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMI 140
+ +I GLC M+ G++ D +TY L L AD A ++ EM+
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 141 VRGLSPSVVIYNKLVSAYCVGERERV-EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
G++ +Y+ + CV +E V EKA + M GL P A +Y ++I G+C
Sbjct: 340 SHGINIKPYMYDCCI---CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 82/179 (45%), Gaps = 9/179 (5%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ L+ CK+ V+E L + +GV PNL + N IQGLC +
Sbjct: 220 NKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIE 279
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+G PD TY +L LC + +A L +M+ GL P YN L++ YC G V
Sbjct: 280 QGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG--GMV 337
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSL----QGTGRGLGPPIVL 221
+ A I+ G PD +Y ++I G C+ E R+L + G+G+ P ++L
Sbjct: 338 QLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETN---RALALFNEALGKGIKPNVIL 393
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 2/149 (1%)
Query: 48 ALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRK 107
+LI C E + A L+ KG++PN++ N +I+GL M+ K
Sbjct: 361 SLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEK 420
Query: 108 GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVE 167
GL P+ T+ L LC A ++ MI +G P + +N L+ Y + ++E
Sbjct: 421 GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYST--QLKME 478
Query: 168 KAVGILRVMAKRGLSPDAVSYTTVISGFC 196
A+ IL VM G+ PD +Y ++++G C
Sbjct: 479 NALEILDVMLDNGVDPDVYTYNSLLNGLC 507
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 20/208 (9%)
Query: 2 SMRLSSTATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVRE 61
S +L L+ + NG+ P ++Y + ++L+ CK K +
Sbjct: 472 STQLKMENALEILDVMLDNGVDP---DVYTY--------------NSLLNGLCKTSKFED 514
Query: 62 AFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQ 121
+K M +KG PNL + N +++ LC M K + PD T+ +L
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574
Query: 122 LLCDRCEADKAYKVLSEM-IVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRG 180
C + D AY + +M +S S YN ++ A+ E+ V A + + M R
Sbjct: 575 GFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFT--EKLNVTMAEKLFQEMVDRC 632
Query: 181 LSPDAVSYTTVISGFCYLDEPELQWRSL 208
L PD +Y ++ GFC L ++ L
Sbjct: 633 LGPDGYTYRLMVDGFCKTGNVNLGYKFL 660
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 89/224 (39%), Gaps = 50/224 (22%)
Query: 6 SSTATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGL 65
+ L F + G+ P +V +YN I+G + G + EA L
Sbjct: 371 ETNRALALFNEALGKGIKP-NVILYNTLIKGLSNQG----------------MILEAAQL 413
Query: 66 WKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCD 125
M++KG+ P + + N ++ GLC M KG PD T+ L
Sbjct: 414 ANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYST 473
Query: 126 RCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGER---------------------- 163
+ + + A ++L M+ G+ P V YN L++ C +
Sbjct: 474 QLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFT 533
Query: 164 -----------ERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
++++A+G+L M + ++PDAV++ T+I GFC
Sbjct: 534 FNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFC 577
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 19/185 (10%)
Query: 12 KTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTD 71
K + ++ G++P ++Y+F IR + + CK + A L M+
Sbjct: 132 KVYMRMRDRGITP---DVYSFTIR--------------MKSFCKTSRPHAALRLLNNMSS 174
Query: 72 KGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADK 131
+G E N+V+ V+ G M G++ +T+ L ++LC + + +
Sbjct: 175 QGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKE 234
Query: 132 AYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTV 191
K+L ++I RG+ P++ YN + C +R ++ AV ++ + ++G PD ++Y +
Sbjct: 235 CEKLLDKVIKRGVLPNLFTYNLFIQGLC--QRGELDGAVRMVGCLIEQGPKPDVITYNNL 292
Query: 192 ISGFC 196
I G C
Sbjct: 293 IYGLC 297
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 4/155 (2%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + + I C+ ++ A + + ++G +P++++ N +I GLC
Sbjct: 250 NLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYL 309
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCV- 160
M +GL PD TY +L C A +++ + + G P Y L+ C
Sbjct: 310 GKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHE 369
Query: 161 GERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
GE R A+ + +G+ P+ + Y T+I G
Sbjct: 370 GETNR---ALALFNEALGKGIKPNVILYNTLIKGL 401
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 2/155 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N S + L+ CK K+ EA+ + M+ G++PN V N +I C
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M RKG PD T+ SL LC+ E A +L +MI G+ + V YN L++A+
Sbjct: 483 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFL-- 540
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
R +++A ++ M +G D ++Y ++I G C
Sbjct: 541 RRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLC 575
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 79/196 (40%), Gaps = 57/196 (29%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESA--------------------LIVARCKEKKVREAFG 64
P + I+N I GF G + A LI KE V A
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410
Query: 65 LWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLC 124
+ M +KG +PN+ S ++ G C
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLG-------------------------------- 438
Query: 125 DRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPD 184
+ D+AY VL+EM GL P+ V +N L+SA+C + R+ +AV I R M ++G PD
Sbjct: 439 ---KIDEAYNVLNEMSADGLKPNTVGFNCLISAFC--KEHRIPEAVEIFREMPRKGCKPD 493
Query: 185 AVSYTTVISGFCYLDE 200
++ ++ISG C +DE
Sbjct: 494 VYTFNSLISGLCEVDE 509
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 2/157 (1%)
Query: 40 AGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXX 99
N + + LI A + +++EA L M +G + ++ N++I+GLC
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARS 585
Query: 100 XXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC 159
M R G P + L LC ++A + EM++RG +P +V +N L++ C
Sbjct: 586 LFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLC 645
Query: 160 VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
R+E + + R + G+ PD V++ T++S C
Sbjct: 646 --RAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLC 680
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 94/245 (38%), Gaps = 52/245 (21%)
Query: 9 ATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKA 68
+ L R + ++G P SV IY LI + K +V EA L +
Sbjct: 235 SALSLLRDMTKHGCVPNSV-IY----------------QTLIHSLSKCNRVNEALQLLEE 277
Query: 69 MTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCD--R 126
M G P+ + N VI GLC M +G PD+ TY L LC R
Sbjct: 278 MFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGR 337
Query: 127 CEA-----------------------------DKAYKVLSEMIVR-GLSPSVVIYNKLVS 156
+A D A VLS+M+ G+ P V YN L+
Sbjct: 338 VDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397
Query: 157 AYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSL-QGTGRGL 215
Y + V A+ +L M +G P+ SYT ++ GFC L + + + L + + GL
Sbjct: 398 GY--WKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455
Query: 216 GPPIV 220
P V
Sbjct: 456 KPNTV 460
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 8/145 (5%)
Query: 52 ARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTP 111
A C ++ A L + MT G PN V +I L M G P
Sbjct: 226 AFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP 285
Query: 112 DENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERERVEKAV 170
D T+ + LC ++A K+++ M++RG +P + Y L++ C +G RV+ A
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIG---RVDAAK 342
Query: 171 GILRVMAKRGLSPDAVSYTTVISGF 195
+ + K P+ V + T+I GF
Sbjct: 343 DLFYRIPK----PEIVIFNTLIHGF 363
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 52/115 (45%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
++LI C+ +V +A L++ M G P+ +S N +I GLC M
Sbjct: 568 NSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVL 627
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
+G TPD T+ SL LC + + ++ G+ P V +N L+S C G
Sbjct: 628 RGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKG 682
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Query: 75 EPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYK 134
EP S N V++ L M + + P T+ + + C E D A
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 135 VLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISG 194
+L +M G P+ VIY L+ + + + RV +A+ +L M G PDA ++ VI G
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHS--LSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILG 296
Query: 195 FCYLD 199
C D
Sbjct: 297 LCKFD 301
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 77/150 (51%), Gaps = 3/150 (2%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ +I CK K + +AF L+ M KG++P++ + N +I LC M
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMI-VRGLSPSVVIYNKLVSAYCVGERER 165
K + PD + +L + +A K+ EM+ + P VV YN L+ +C + +R
Sbjct: 314 KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFC--KYKR 371
Query: 166 VEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
VE+ + + R M++RGL + V+YTT+I GF
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGF 401
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 47 SALIVARCKEKKVREAFGLWKAMT-DKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMN 105
+ALI A KE K+ EA L+ M K P++V+ N +I+G C M+
Sbjct: 324 NALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMS 383
Query: 106 RKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERER 165
++GL + TY +L + D A V +M+ G+ P ++ YN L+ C
Sbjct: 384 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLC--NNGN 441
Query: 166 VEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTG-RGLGPPIVLKFF 224
VE A+ + M KR + D V+YTT+I C + E W +G+ P +V
Sbjct: 442 VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVV---- 497
Query: 225 FTSTTM 230
T TTM
Sbjct: 498 -TYTTM 502
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 1/149 (0%)
Query: 48 ALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRK 107
A+I CK + A L M +E ++V N +I GLC M K
Sbjct: 220 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 279
Query: 108 GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVE 167
G+ PD TY L LC+ A ++LS+M+ + ++P +V +N L+ A+ V E + VE
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAF-VKEGKLVE 338
Query: 168 KAVGILRVMAKRGLSPDAVSYTTVISGFC 196
++ + PD V+Y T+I GFC
Sbjct: 339 AEKLYDEMVKSKHCFPDVVAYNTLIKGFC 367
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 18/185 (9%)
Query: 12 KTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTD 71
K + ++ ++ P V YN I+GF CK K+V E +++ M+
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGF----------------CKYKRVEEGMEVFREMSQ 384
Query: 72 KGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADK 131
+G+ N V+ +I G M G+ PD TY L LC+ +
Sbjct: 385 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVET 444
Query: 132 AYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTV 191
A V M R + +V Y ++ A C + +VE + ++ +G+ P+ V+YTT+
Sbjct: 445 ALVVFEYMQKRDMKLDIVTYTTMIEALC--KAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 502
Query: 192 ISGFC 196
+SGFC
Sbjct: 503 MSGFC 507
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 2/149 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ L+ + K EA L + M KG +P+LV+ AVI GLC M +
Sbjct: 184 TTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK 243
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+ D Y ++ LC D A+ + ++M +G+ P V YN L+S C R
Sbjct: 244 GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC--NYGRW 301
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGF 195
A +L M ++ ++PD V + +I F
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAF 330
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 7/190 (3%)
Query: 33 RIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXX 92
+++ + N + S I C+ ++ A + M G P++V+ N+++ G C
Sbjct: 100 QMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 159
Query: 93 XXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYN 152
M G PD T+ +L L +A +A ++ M+V+G P +V Y
Sbjct: 160 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 219
Query: 153 KLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC---YLDEPELQWRSLQ 209
+++ C +R + A+ +L M K + D V Y T+I G C ++D+ + ++
Sbjct: 220 AVINGLC--KRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME 277
Query: 210 GTGRGLGPPI 219
+G+ P +
Sbjct: 278 --TKGIKPDV 285
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 2/161 (1%)
Query: 35 RGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXX 94
R FAGA + + L ++ K+ +A GL+ M P++V + ++ +
Sbjct: 32 RSFAGASSDDCRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKF 91
Query: 95 XXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKL 154
M G++ + TY C R + A +L +M+ G PS+V N L
Sbjct: 92 DLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSL 151
Query: 155 VSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
++ +C G R+ +AV ++ M + G PD V++TT++ G
Sbjct: 152 LNGFCHG--NRISEAVALVDQMVEMGYQPDTVTFTTLVHGL 190
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 20/127 (15%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESE-------------------SALIVARC 54
F+Q+ +G+ P + YN + G GN E+ + +I A C
Sbjct: 414 FKQMVSDGVHP-DIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALC 472
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
K KV + + L+ +++ KGV+PN+V+ ++ G C M G P+
Sbjct: 473 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSG 532
Query: 115 TYMSLFQ 121
TY +L +
Sbjct: 533 TYNTLIR 539
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 86/212 (40%), Gaps = 35/212 (16%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + +A+I KE K EA L++ MT + V+P++ + N++I GLC
Sbjct: 243 NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML 302
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M KG PD TY +L C D+ K+ EM RGL + YN ++ Y
Sbjct: 303 DLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQA 362
Query: 162 ERE------------------------------RVEKAVGILRVMAKRGLSPDAVSYTTV 191
R RVEKA+ + M K + D +Y V
Sbjct: 363 GRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV 422
Query: 192 ISGFCYLDEPELQW---RSLQGTGRGLGPPIV 220
I G C + E W RSL + +GL P +V
Sbjct: 423 IHGMCKIGNVEDAWDLFRSL--SCKGLKPDVV 452
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 84/192 (43%), Gaps = 26/192 (13%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
P V YN I GF CK K+V E L++ M +G+ + ++ N +
Sbjct: 312 PDVVTYNTLINGF----------------CKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
IQG M+ + P+ TY L LC +KA + M +
Sbjct: 356 IQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 412
Query: 145 SPSVVIYNKLVSAYC-VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC---YLDE 200
+ YN ++ C +G VE A + R ++ +GL PD VSYTT+ISGFC D+
Sbjct: 413 ELDITTYNIVIHGMCKIGN---VEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDK 469
Query: 201 PELQWRSLQGTG 212
+L +R +Q G
Sbjct: 470 SDLLYRKMQEDG 481
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ +I CK V +A L+ M GV + V+ N+++ GLC M
Sbjct: 178 NTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVM 237
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+ + P+ T+ ++ + + +A K+ EM R + P V YN L++ C+ RV
Sbjct: 238 RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM--HGRV 295
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
++A +L +M +G PD V+Y T+I+GFC
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFC 325
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
K K L+ M G+ +L S N VI LC M + G PD
Sbjct: 81 KSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVV 140
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERERVEKAVGIL 173
T SL C A ++S+M G P VVIYN ++ C +G V AV +
Sbjct: 141 TVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG---LVNDAVELF 197
Query: 174 RVMAKRGLSPDAVSYTTVISGFC 196
M + G+ DAV+Y ++++G C
Sbjct: 198 DRMERDGVRADAVTYNSLVAGLC 220
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 2/154 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
+ S + +I C+ + A + M G EP++V+ +++I G C
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M G PD Y ++ C + A ++ M G+ V YN LV+ C
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
R A ++R M R + P+ +++T VI F
Sbjct: 223 GRW--SDAARLMRDMVMRDIVPNVITFTAVIDVF 254
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 17/151 (11%)
Query: 12 KTFRQIFRNGMSPPSVNIYNFRIRGFAGAG----------------NFESESALIVARCK 55
K FR++ + G+ ++ YN I+G+ AG N + S L+ C
Sbjct: 335 KLFREMAQRGLVGDTIT-YNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCM 393
Query: 56 EKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENT 115
+V +A L++ M +E ++ + N VI G+C ++ KGL PD +
Sbjct: 394 NWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVS 453
Query: 116 YMSLFQLLCDRCEADKAYKVLSEMIVRGLSP 146
Y ++ C + + DK+ + +M GL P
Sbjct: 454 YTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 2/138 (1%)
Query: 59 VREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMS 118
+ E L+ M P++V + V+ + M G+ D +Y
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 119 LFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAK 178
+ LC A V+ +M+ G P VV + L++ +C G RV A+ ++ M +
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQG--NRVFDAIDLVSKMEE 167
Query: 179 RGLSPDAVSYTTVISGFC 196
G PD V Y T+I G C
Sbjct: 168 MGFRPDVVIYNTIIDGSC 185
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 4/168 (2%)
Query: 30 YNFRIRGFAGAG--NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQG 87
YNF ++ G + S S LI C+ R+A+ L++ M KG+ N+V+ ++I+
Sbjct: 310 YNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKA 369
Query: 88 LCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPS 147
M GL+PD Y ++ LC DKAY V ++MI ++P
Sbjct: 370 FLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPD 429
Query: 148 VVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+ YN L+S C RV +A+ + M + PD +++ +I G
Sbjct: 430 AISYNSLISGLC--RSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGL 475
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 3/143 (2%)
Query: 54 CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDE 113
C+E KV A + M +G EP++VS +I GL M R G++PD
Sbjct: 125 CRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDN 184
Query: 114 NTYMSLFQLLCDRCEADKAYKVLSEMIVRG-LSPSVVIYNKLVSAYCVGERERVEKAVGI 172
+L LC + D AY++++E I + S V+YN L+S +C + R+EKA +
Sbjct: 185 KACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFC--KAGRIEKAEAL 242
Query: 173 LRVMAKRGLSPDAVSYTTVISGF 195
M+K G PD V+Y +++ +
Sbjct: 243 KSYMSKIGCEPDLVTYNVLLNYY 265
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 6/182 (3%)
Query: 17 IFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGL-WKAMTDKGVE 75
+FR G +V I+N IR N ++ +AL+V C +KV A+ + + + V+
Sbjct: 159 LFRAGKVTDAVEIWNAMIRSGVSPDN-KACAALVVGLCHARKVDLAYEMVAEEIKSARVK 217
Query: 76 PNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKV 135
+ V NA+I G C M++ G PD TY L D +A V
Sbjct: 218 LSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGV 277
Query: 136 LSEMIVRGLSPSVVIYNKLVSAYC-VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISG 194
++EM+ G+ YN+L+ +C V ++ +++ M RG D VSY+T+I
Sbjct: 278 MAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNF--MVKEMEPRGFC-DVVSYSTLIET 334
Query: 195 FC 196
FC
Sbjct: 335 FC 336
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Query: 72 KGVEP----NLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRC 127
K +EP ++VS + +I+ C M +KG+ + TY SL +
Sbjct: 315 KEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREG 374
Query: 128 EADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVS 187
+ A K+L +M GLSP + Y ++ C + V+KA G+ M + ++PDA+S
Sbjct: 375 NSSVAKKLLDQMTELGLSPDRIFYTTILDHLC--KSGNVDKAYGVFNDMIEHEITPDAIS 432
Query: 188 YTTVISGFC 196
Y ++ISG C
Sbjct: 433 YNSLISGLC 441
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 78/193 (40%), Gaps = 20/193 (10%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMT 70
++TF + + G P V+ Y I G AG KV +A +W AM
Sbjct: 134 VQTFFCMVQRGREPDVVS-YTILINGLFRAG----------------KVTDAVEIWNAMI 176
Query: 71 DKGVEPNLVSSNAVIQGLCXX-XXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEA 129
GV P+ + A++ GLC + + Y +L C
Sbjct: 177 RSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRI 236
Query: 130 DKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYT 189
+KA + S M G P +V YN L++ Y + +++A G++ M + G+ DA SY
Sbjct: 237 EKAEALKSYMSKIGCEPDLVTYNVLLNYY--YDNNMLKRAEGVMAEMVRSGIQLDAYSYN 294
Query: 190 TVISGFCYLDEPE 202
++ C + P+
Sbjct: 295 QLLKRHCRVSHPD 307
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%)
Query: 54 CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDE 113
CK V +A+G++ M + + P+ +S N++I GLC M K PDE
Sbjct: 406 CKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDE 465
Query: 114 NTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC 159
T+ + L + AYKV +M+ +G + + + L+ A C
Sbjct: 466 LTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 23/207 (11%)
Query: 9 ATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAG-------------------NFESESAL 49
++K F+++ + P ++ YN I G G N + +AL
Sbjct: 314 GSMKVFKEMLDQDVKPNVIS-YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNAL 372
Query: 50 IVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGL 109
I CK ++EA ++ ++ +G P N +I C M R+G+
Sbjct: 373 INGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI 432
Query: 110 TPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKA 169
PD TY L LC + A K+ ++ +GL P +V ++ L+ YC R KA
Sbjct: 433 VPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESR--KA 489
Query: 170 VGILRVMAKRGLSPDAVSYTTVISGFC 196
+L+ M+K GL P ++Y V+ G+C
Sbjct: 490 AMLLKEMSKMGLKPRHLTYNIVMKGYC 516
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 19/184 (10%)
Query: 13 TFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDK 72
+++ N +SP ++ +N I GF K+ + + ++K M D+
Sbjct: 283 VLKEMVENDVSP-NLTTFNILIDGF----------------WKDDNLPGSMKVFKEMLDQ 325
Query: 73 GVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKA 132
V+PN++S N++I GLC M G+ P+ TY +L C +A
Sbjct: 326 DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385
Query: 133 YKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVI 192
+ + +G P+ +YN L+ AYC + +++ + M + G+ PD +Y +I
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYC--KLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443
Query: 193 SGFC 196
+G C
Sbjct: 444 AGLC 447
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 27/207 (13%)
Query: 13 TFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDK 72
++++ R + P N++ F + +I A CK K+ +A + + M
Sbjct: 210 VYKEMIRRKIQP---NVFTFNV--------------VINALCKTGKMNKARDVMEDMKVY 252
Query: 73 GVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADK- 131
G PN+VS N +I G C + ++ + D + ++ F +L D D
Sbjct: 253 GCSPNVVSYNTLIDGYCKLGGNGKMYKADAVL-KEMVENDVSPNLTTFNILIDGFWKDDN 311
Query: 132 ---AYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSY 188
+ KV EM+ + + P+V+ YN L++ C G ++ +A+ + M G+ P+ ++Y
Sbjct: 312 LPGSMKVFKEMLDQDVKPNVISYNSLINGLCNG--GKISEAISMRDKMVSAGVQPNLITY 369
Query: 189 TTVISGFC---YLDEPELQWRSLQGTG 212
+I+GFC L E + S++G G
Sbjct: 370 NALINGFCKNDMLKEALDMFGSVKGQG 396
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 7/179 (3%)
Query: 19 RNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNL 78
+N M +++++ ++G + LI A CK K+ + F L + M +G+ P++
Sbjct: 378 KNDMLKEALDMFG-SVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436
Query: 79 VSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSE 138
+ N +I GLC + KGL PD T+ L + C + E+ KA +L E
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKE 495
Query: 139 MIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVM--AKRGLSPDAVSYTTVISGF 195
M GL P + YN ++ YC +E KA +R +R L + SY ++ G+
Sbjct: 496 MSKMGLKPRHLTYNIVMKGYC---KEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGY 551
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 119 LFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAK 178
+ LL + AD Y V EMI R + P+V +N +++A C + ++ KA ++ M
Sbjct: 195 MIALLKENRSADVEY-VYKEMIRRKIQPNVFTFNVVINALC--KTGKMNKARDVMEDMKV 251
Query: 179 RGLSPDAVSYTTVISGFCYL 198
G SP+ VSY T+I G+C L
Sbjct: 252 YGCSPNVVSYNTLIDGYCKL 271
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 81/155 (52%), Gaps = 2/155 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
NF S S L+ + +K AFG+ M +G N+ + N +++GLC
Sbjct: 106 NFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLL 165
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M R L PD +Y ++ + C+ E +KA ++ +EM G S S+V + L+ A+C
Sbjct: 166 REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFC-- 223
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+ ++++A+G L+ M GL D V YT++I GFC
Sbjct: 224 KAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFC 258
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 80/183 (43%), Gaps = 19/183 (10%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKG 73
R++ RN + P V YN IRGF C+ K++ +A L M G
Sbjct: 165 LREMRRNSL-MPDVFSYNTVIRGF----------------CEGKELEKALELANEMKGSG 207
Query: 74 VEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAY 133
+LV+ +I C M GL D Y SL + CD E D+
Sbjct: 208 CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGK 267
Query: 134 KVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVIS 193
+ E++ RG SP + YN L+ +C + ++++A I M +RG+ P+ +YT +I
Sbjct: 268 ALFDEVLERGDSPCAITYNTLIRGFC--KLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325
Query: 194 GFC 196
G C
Sbjct: 326 GLC 328
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 21/185 (11%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKG 73
F ++ G SP ++ YN IRGF CK +++EA +++ M ++G
Sbjct: 270 FDEVLERGDSPCAIT-YNTLIRGF----------------CKLGQLKEASEIFEFMIERG 312
Query: 74 VEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAY 133
V PN+ + +I GLC M K P+ TY + LC A
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372
Query: 134 KVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRG--LSPDAVSYTTV 191
+++ M R P + YN L+ C + +++A +L +M K PD +SY +
Sbjct: 373 EIVELMKKRRTRPDNITYNILLGGLCA--KGDLDEASKLLYLMLKDSSYTDPDVISYNAL 430
Query: 192 ISGFC 196
I G C
Sbjct: 431 IHGLC 435
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 6/165 (3%)
Query: 35 RGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXX 94
RGFA N + + L+ C+ + +A L + M + P++ S N VI+G C
Sbjct: 136 RGFAF--NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKEL 193
Query: 95 XXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKL 154
M G + T+ L C + D+A L EM GL +V+Y L
Sbjct: 194 EKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSL 253
Query: 155 VSAYC-VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYL 198
+ +C GE +R + + +RG SP A++Y T+I GFC L
Sbjct: 254 IRGFCDCGELDR---GKALFDEVLERGDSPCAITYNTLIRGFCKL 295
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 6/179 (3%)
Query: 26 SVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVI 85
+++IY+ + GAG+ + + L+ + K V +A LWK ++D + N + A+I
Sbjct: 443 ALDIYDLLVEKL-GAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMI 501
Query: 86 QGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLS 145
G C M L P Y L LC D+A+++ EM
Sbjct: 502 DGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF 561
Query: 146 PSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC---YLDEP 201
P VV +N ++ + ++ A +L M++ GLSPD +Y+ +I+ F YLDE
Sbjct: 562 PDVVSFNIMIDGSL--KAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEA 618
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ L+ + CKE + +A+ L++ M P++VS N +I G M+R
Sbjct: 533 NCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSR 592
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
GL+PD TY L D+A +M+ G P I + ++ YC+ + E
Sbjct: 593 AGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK-YCISQGE-T 650
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+K +++ + + + D TV+ C
Sbjct: 651 DKLTELVKKLVDKDIVLDKELTCTVMDYMC 680
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ +I + CK + V A L+ M KG+ PN+V+ N++I LC M
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
K + P+ T+ +L + +A K+ EMI R + P + YN L++ +C+ R+
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM--HNRL 379
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
++A + + M + P+ +Y T+I+GFC
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFC 409
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 2/154 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + ++LI C + +A L M +K + PN+V+ NA+I
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M ++ + PD TY L C D+A ++ M+ + P++ YN L++ +C
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC-- 409
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+ +RVE V + R M++RGL + V+YTT+I GF
Sbjct: 410 KCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 54 CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDE 113
CK + A L M ++ N+V N +I LC M KG+ P+
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 114 NTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGIL 173
TY SL LC+ A ++LS M+ + ++P+VV +N L+ A+ E + VE A +
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAF-FKEGKLVE-AEKLH 351
Query: 174 RVMAKRGLSPDAVSYTTVISGFCY---LDEPELQWR 206
M +R + PD ++Y +I+GFC LDE + ++
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFK 387
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 3/164 (1%)
Query: 58 KVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYM 117
KV +A L+ M P++V N ++ + M G++ D TY
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 118 SLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMA 177
C R + A VL++M+ G P +V + L++ YC +R+ AV ++ M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYC--HSKRISDAVALVDQMV 180
Query: 178 KRGLSPDAVSYTTVISG-FCYLDEPELQWRSLQGTGRGLGPPIV 220
+ G PD ++TT+I G F + E Q RG P +V
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV 224
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 81/192 (42%), Gaps = 12/192 (6%)
Query: 5 LSSTATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFG 64
LS+ A + F + G ++ I + + + S I C+ ++ A
Sbjct: 90 LSAVAKMNKFELVISLGEQMQTLGI----------SHDLYTYSIFINCFCRRSQLSLALA 139
Query: 65 LWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLC 124
+ M G EP++V+ ++++ G C M G PD T+ +L L
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 125 DRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPD 184
+A +A ++ +M+ RG P +V Y +V+ C +R ++ A+ +L M + +
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC--KRGDIDLALNLLNKMEAARIKAN 257
Query: 185 AVSYTTVISGFC 196
V + T+I C
Sbjct: 258 VVIFNTIIDSLC 269
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 85/223 (38%), Gaps = 28/223 (12%)
Query: 12 KTFRQIFRNGMSPPSVNIYNFRIRGFAGAG-------------------NFESESALIVA 52
K ++ + + P ++ YN I GF N ++ + LI
Sbjct: 349 KLHEEMIQRSIDPDTIT-YNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLING 407
Query: 53 RCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPD 112
CK K+V + L++ M+ +G+ N V+ +IQG M + D
Sbjct: 408 FCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTD 467
Query: 113 ENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGI 172
TY L LC + D A + + + ++ IYN ++ C + K
Sbjct: 468 IMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMC-----KAGKVGEA 522
Query: 173 LRVMAKRGLSPDAVSYTTVISGFC---YLDEPELQWRSLQGTG 212
+ + PD V+Y T+ISG C L E + +R ++ G
Sbjct: 523 WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 22/209 (10%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFE-------------------SESALIVARC 54
R+I G+ SV YN I G+ G+ + + ++LI C
Sbjct: 385 IREIREKGIVLDSVT-YNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLC 443
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
++ K REA L++ + KG++P+LV N ++ G C M+ + PD+
Sbjct: 444 RKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDV 503
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILR 174
TY L + LC + ++A +++ EM RG+ P + YN L+S Y ++ + A +
Sbjct: 504 TYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGY--SKKGDTKHAFMVRD 561
Query: 175 VMAKRGLSPDAVSYTTVISGFCYLDEPEL 203
M G +P ++Y ++ G E EL
Sbjct: 562 EMLSLGFNPTLLTYNALLKGLSKNQEGEL 590
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 12 KTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFE-------------------SESALIVA 52
+ R++ G+ P SV+ YN IRG + G+ E + + LI
Sbjct: 313 EVLREMKEIGLVPDSVS-YNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHG 371
Query: 53 RCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPD 112
E K+ A L + + +KG+ + V+ N +I G C M G+ P
Sbjct: 372 LFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPT 431
Query: 113 ENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERERVEKAVG 171
+ TY SL +LC + + +A ++ +++ +G+ P +V+ N L+ +C +G +R A
Sbjct: 432 QFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDR---AFS 488
Query: 172 ILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQG--TGRGLGP 217
+L+ M ++PD V+Y ++ G C + E + R L G RG+ P
Sbjct: 489 LLKEMDMMSINPDDVTYNCLMRGLCGEGKFE-EARELMGEMKRRGIKP 535
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 19/168 (11%)
Query: 28 NIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQG 87
N+Y F I +I CKE K+++A G M G++P +V+ N ++QG
Sbjct: 224 NVYTFNI--------------MINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQG 269
Query: 88 LCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPS 147
M KG PD TY + +C+ +A +VL EM GL P
Sbjct: 270 FSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNE---GRASEVLREMKEIGLVPD 326
Query: 148 VVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
V YN L+ C + +E A M K+G+ P +Y T+I G
Sbjct: 327 SVSYNILIRG-CSNNGD-LEMAFAYRDEMVKQGMVPTFYTYNTLIHGL 372
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 77/172 (44%), Gaps = 21/172 (12%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
P++ YN ++GF+ G E +I M KG +P++ + N +
Sbjct: 258 PTIVTYNTLVQGFSLRGRIEGARLII----------------SEMKSKGFQPDMQTYNPI 301
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
+ +C M GL PD +Y L + + + + A+ EM+ +G+
Sbjct: 302 LSWMC---NEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGM 358
Query: 145 SPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
P+ YN L+ + ++E A ++R + ++G+ D+V+Y +I+G+C
Sbjct: 359 VPTFYTYNTLIHGLFM--ENKIEAAEILIREIREKGIVLDSVTYNILINGYC 408
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 15/153 (9%)
Query: 58 KVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYM 117
++ A+ + M ++ N+ + N +I LC M G+ P TY
Sbjct: 205 RIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYN 264
Query: 118 SLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMA 177
+L Q R + A ++SEM +G P + YN ++S C R A +LR M
Sbjct: 265 TLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR-----ASEVLREMK 319
Query: 178 KRGLSPDAVSYTTVISG----------FCYLDE 200
+ GL PD+VSY +I G F Y DE
Sbjct: 320 EIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDE 352
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ LI CK ++ A L M KG+ ++V+ N ++ GLC M +
Sbjct: 180 NTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMK 239
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+ + PD T+ +L + + D+A ++ EMI + P+ V YN +++ C+ R+
Sbjct: 240 RSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM--HGRL 297
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
A +MA +G P+ V+Y T+ISGFC
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTLISGFC 327
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 2/156 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ALI K+ + EA L+K M V+PN V+ N++I GLC M
Sbjct: 250 TALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMAS 309
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
KG P+ TY +L C D+ K+ M G + + YN L+ YC + RV
Sbjct: 310 KGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRV 369
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPE 202
A+ I M R ++PD +++ ++ G C E E
Sbjct: 370 --ALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 2/149 (1%)
Query: 48 ALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRK 107
+L+ C ++ +AF L M G EPN+V N +I GLC M +K
Sbjct: 146 SLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKK 205
Query: 108 GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVE 167
GL D TY +L LC A ++L +M+ R ++P VV + L+ + ++ ++
Sbjct: 206 GLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFV--KQGNLD 263
Query: 168 KAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+A + + M + + P+ V+Y ++I+G C
Sbjct: 264 EAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 15/207 (7%)
Query: 5 LSSTATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFG 64
L++TA L+ + +V ++ ++ + + + S + LI C+ ++ A
Sbjct: 78 LTATANLRRYE----------TVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALS 127
Query: 65 LWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLC 124
+ M G EP++V+ +++ G C M + G P+ Y +L LC
Sbjct: 128 VLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLC 187
Query: 125 DRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPD 184
E + A ++L+EM +GL VV YN L++ C R A +LR M KR ++PD
Sbjct: 188 KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW--SDAARMLRDMMKRSINPD 245
Query: 185 AVSYTTVISGFC---YLDEPELQWRSL 208
V++T +I F LDE + ++ +
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEM 272
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 2/155 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + + LI CK + V E L++ M+ +G ++ + N +I G C
Sbjct: 315 NVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIF 374
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M + +TPD T+ L LC E + A +M +V YN ++ C
Sbjct: 375 CWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLC-- 432
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+ ++VEKA + + G+ PDA +YT +I G C
Sbjct: 433 KADKVEKAWELFCRLPVEGVKPDARTYTIMILGLC 467
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 94/240 (39%), Gaps = 28/240 (11%)
Query: 7 STATLKTFRQIFR-----NGMSPPSVNIYNFRIR-GFAGAGNFESESAL----------- 49
+T+T K FR++ G + + + Y ++R GF + FE AL
Sbjct: 10 ATSTAKGFRRVVNPNLLGGGAAARAFSDYREKLRTGFLHSIRFEDAFALFFEMVHSQPLP 69
Query: 50 --------IVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
+ A ++ + M G+ +L S +I C
Sbjct: 70 SIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVL 129
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M + G P T+ SL C A+ ++ M+ G P+VV+YN L+ C
Sbjct: 130 GKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLC-- 187
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQG-TGRGLGPPIV 220
+ + A+ +L M K+GL D V+Y T+++G CY R L+ R + P +V
Sbjct: 188 KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVV 247
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
L+ CK V A L + M D G N V+ NA+++GLC + +KG
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEK 168
L P+ TY L + D+A K+L E+IV+G P++V YN L++ +C + R +
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFC--KEGRTDD 264
Query: 169 AVGILRVMAKRGLSPDAVSYTTVISGFC 196
A+ + R + +G + VSY ++ C
Sbjct: 265 AMALFRELPAKGFKANVVSYNILLRCLC 292
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 75/159 (47%), Gaps = 4/159 (2%)
Query: 40 AGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXX 99
A N + S L+ A KE+ EA L + KG EPNLVS N ++ G C
Sbjct: 208 APNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMA 267
Query: 100 XXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC 159
+ KG + +Y L + LC ++A +L+EM +PSVV YN L+++
Sbjct: 268 LFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINS-- 325
Query: 160 VGERERVEKAVGILRVMAK--RGLSPDAVSYTTVISGFC 196
+ R E+A+ +L+ M+K A SY VI+ C
Sbjct: 326 LAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLC 364
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 72/163 (44%), Gaps = 2/163 (1%)
Query: 32 FRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXX 91
F I G + + +S S R E + ++F +++ G +PN+ S ++ LC
Sbjct: 60 FTITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKA 119
Query: 92 XXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIY 151
M G+ PD + Y L LC R A +++ +M G + V Y
Sbjct: 120 NRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTY 179
Query: 152 NKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISG 194
N LV C+ + +++ + + ++GL+P+A +Y+ ++
Sbjct: 180 NALVRGLCM--LGSLNQSLQFVERLMQKGLAPNAFTYSFLLEA 220
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 74/156 (47%), Gaps = 4/156 (2%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + L+ CK ++++A + + M G+ P+ + ++ LC
Sbjct: 105 NVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLV 164
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M G + TY +L + LC +++ + + ++ +GL+P+ Y+ L+ A
Sbjct: 165 EKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEA---A 221
Query: 162 ERER-VEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+ER ++AV +L + +G P+ VSY +++GFC
Sbjct: 222 YKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFC 257
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 9/173 (5%)
Query: 58 KVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYM 117
KV+EAF + +++++K +VI LC M R G PD +TY
Sbjct: 403 KVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYS 462
Query: 118 SLFQLLCDRCEADKAYKVLSEM-IVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVM 176
+L + LC A +VLS M P+V +N ++ C + R + A+ + +M
Sbjct: 463 ALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLC--KIRRTDLAMEVFEMM 520
Query: 177 AKRGLSPDAVSYTTVISGFCYLDEPEL------QWRSLQGTGRGLGPPIVLKF 223
++ P+ +Y ++ G + DE EL + R + G+ IV++F
Sbjct: 521 VEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAVDRIVMQF 573
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKG 73
F ++ ++G SP + YN I F G +V EA +++ +
Sbjct: 465 FEKMKKDGPSP-DIFTYNILIASFGRVG----------------EVDEAINIFEELERSD 507
Query: 74 VEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAY 133
+P+++S N++I L M KGL PD TY +L + + AY
Sbjct: 508 CKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAY 567
Query: 134 KVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTV 191
+ EM+V+G P++V YN L+ C+ + R +AV + M ++GL+PD+++YT +
Sbjct: 568 SLFEEMLVKGCQPNIVTYNILLD--CLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 3/185 (1%)
Query: 37 FAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXX 96
F G +S +++ + C K EA + + +KGV + + N V L
Sbjct: 401 FPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISH 460
Query: 97 XXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVS 156
M + G +PD TY L E D+A + E+ P ++ YN L++
Sbjct: 461 IHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLIN 520
Query: 157 AYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGT-GRGL 215
C+G+ V++A + M ++GL+PD V+Y+T++ F + E+ + + +G
Sbjct: 521 --CLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGC 578
Query: 216 GPPIV 220
P IV
Sbjct: 579 QPNIV 583
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
K K++ L++ M G P++ + N +I + R PD
Sbjct: 454 KLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDII 513
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILR 174
+Y SL L + D+A+ EM +GL+P VV Y+ L+ C G+ ERVE A +
Sbjct: 514 SYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLME--CFGKTERVEMAYSLFE 571
Query: 175 VMAKRGLSPDAVSYTTVIS 193
M +G P+ V+Y ++
Sbjct: 572 EMLVKGCQPNIVTYNILLD 590
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 79/177 (44%), Gaps = 7/177 (3%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S L+ K V EA L+ M V+ S ++++ LC ++
Sbjct: 376 SYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHE 435
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
KG+ D Y ++F L + + + +M G SP + YN L++++ G V
Sbjct: 436 KGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASF--GRVGEV 493
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCY---LDEPELQWRSLQGTGRGLGPPIV 220
++A+ I + + PD +SY ++I+ +DE ++++ +Q +GL P +V
Sbjct: 494 DEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQ--EKGLNPDVV 548
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Query: 61 EAFGLWKAMTDK-GVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSL 119
+A LW M G++PN+V+ N ++QG C M G +P+ TY SL
Sbjct: 334 DALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSL 393
Query: 120 FQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKR 179
R D A + ++M+ G P+VV+Y +V A C + ++A ++ +M+K
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALC--RHSKFKEAESLIEIMSKE 451
Query: 180 GLSPDAVSYTTVISGFC---YLDEPELQWRSLQGTGRGLGPPIVLKF 223
+P ++ I G C LD E +R ++ R PP ++ +
Sbjct: 452 NCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHR--CPPNIVTY 496
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 102/212 (48%), Gaps = 12/212 (5%)
Query: 9 ATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKA 68
+ + +RQ+ G++ +V ++ +RI+ F + + + ++ E +++ + +++
Sbjct: 116 SVISVYRQV---GLAERAVEMF-YRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRD 171
Query: 69 MTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCE 128
M G EPN+ + N +++ LC M+ KG PD +Y ++ +C+
Sbjct: 172 MKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGL 231
Query: 129 ADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSY 188
+ + + P V +YN L++ C + + A ++R M ++G+SP+ +SY
Sbjct: 232 VKEGRE-----LAERFEPVVSVYNALINGLC--KEHDYKGAFELMREMVEKGISPNVISY 284
Query: 189 TTVISGFCYLDEPELQWRSL-QGTGRGLGPPI 219
+T+I+ C + EL + L Q RG P I
Sbjct: 285 STLINVLCNSGQIELAFSFLTQMLKRGCHPNI 316
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 25/231 (10%)
Query: 3 MRLSSTATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNF------------------- 43
+R ++ L + Q+ R P+V YN ++GF GN
Sbjct: 328 LRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNI 387
Query: 44 ESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXX 103
+ +LI K + A +W M G PN+V +++ LC
Sbjct: 388 RTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEI 447
Query: 104 MNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRG-LSPSVVIYNKLVSAYCVGE 162
M+++ P T+ + + LCD D A KV +M + P++V YN+L+ + +
Sbjct: 448 MSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDG--LAK 505
Query: 163 RERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTGR 213
R+E+A G+ R + RG+ + +Y T++ G C P + +LQ G+
Sbjct: 506 ANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGI---ALQLVGK 553
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 88/222 (39%), Gaps = 52/222 (23%)
Query: 25 PSVNIYNFRIRGFAGAG-------------------NFESESALIVARCKEKKVREAFGL 65
PSV IYN + G N + + L+ A CK KV A L
Sbjct: 144 PSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKL 203
Query: 66 WKAMTDKGVEPNLVSS------------------------------NAVIQGLCXXXXXX 95
M++KG P+ VS NA+I GLC
Sbjct: 204 LVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYK 263
Query: 96 XXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLV 155
M KG++P+ +Y +L +LC+ + + A+ L++M+ RG P++ + LV
Sbjct: 264 GAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLV 323
Query: 156 SAYCVGERERVEKAVGILRVMAKR-GLSPDAVSYTTVISGFC 196
+ R A+ + M + GL P+ V+Y T++ GFC
Sbjct: 324 KGCFL--RGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFC 363
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 19/195 (9%)
Query: 4 RLSSTATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAF 63
R S ++ +I PSV +N I+G AG + V R E++ R
Sbjct: 434 RHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEK--VFRQMEQQHR--- 488
Query: 64 GLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLL 123
PN+V+ N ++ GL + +G+ +TY +L
Sbjct: 489 ----------CPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGS 538
Query: 124 CDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMA--KRGL 181
C+ A +++ +M+V G SP + N ++ AYC ++ + E+A +L +++ +R
Sbjct: 539 CNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYC--KQGKAERAAQMLDLVSCGRRKW 596
Query: 182 SPDAVSYTTVISGFC 196
PD +SYT VI G C
Sbjct: 597 RPDVISYTNVIWGLC 611
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 20/190 (10%)
Query: 12 KTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTD 71
K FRQ+ + PP++ YN + G A K ++ EA+GL + +
Sbjct: 478 KVFRQMEQQHRCPPNIVTYNELLDGLA----------------KANRIEEAYGLTREIFM 521
Query: 72 KGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADK 131
+GVE + + N ++ G C M G +PDE T + C + +A++
Sbjct: 522 RGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAER 581
Query: 132 AYKVLSEMIV--RGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYT 189
A ++L + R P V+ Y ++ C E V +L M G+ P +++
Sbjct: 582 AAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCR--EDGVILLERMISAGIVPSIATWS 639
Query: 190 TVISGFCYLD 199
+I+ F D
Sbjct: 640 VLINCFILDD 649
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 76/149 (51%), Gaps = 3/149 (2%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
++ A C+ V A ++ M D G +PNL++ ++I GLC M R G
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 317
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRG-LSPSVVIYNKLVSAYCVGERERVE 167
P+ T+ +L LC R +KA+++ +++ P+V Y ++ YC + +++
Sbjct: 318 WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYC--KEDKLN 375
Query: 168 KAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+A + M ++GL P+ +YTT+I+G C
Sbjct: 376 RAEMLFSRMKEQGLFPNVNTYTTLINGHC 404
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 26/220 (11%)
Query: 25 PSVNIYNFRIRGFAGAGNF-------------------ESESALIVARCKEKKVREAFGL 65
P+VN Y I G AG+F + +A I + CK+ + EA+ L
Sbjct: 391 PNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYEL 450
Query: 66 WKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCD 125
G+E + V+ +IQ C MN+ G D L C
Sbjct: 451 LNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCR 510
Query: 126 RCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDA 185
+ + ++ ++ ++ GL P+ Y ++S YC + ++ A+ M + G PD+
Sbjct: 511 QKKMKESERLFQLVVSLGLIPTKETYTSMISCYC--KEGDIDLALKYFHNMKRHGCVPDS 568
Query: 186 VSYTTVISGFC---YLDEPELQWRSLQGTGRGLGPPIVLK 222
+Y ++ISG C +DE + ++ RGL PP V +
Sbjct: 569 FTYGSLISGLCKKSMVDEACKLYEAM--IDRGLSPPEVTR 606
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 20/184 (10%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKG 73
FR++ G P N+ NF ++LI CK+ +++AF + + M G
Sbjct: 275 FRKMIDLGFKP---NLINF--------------TSLIDGLCKKGSIKQAFEMLEEMVRNG 317
Query: 74 VEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG-LTPDENTYMSLFQLLCDRCEADKA 132
+PN+ + A+I GLC + R P+ +TY S+ C + ++A
Sbjct: 318 WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRA 377
Query: 133 YKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVI 192
+ S M +GL P+V Y L++ +C + +A ++ +M G P+ +Y I
Sbjct: 378 EMLFSRMKEQGLFPNVNTYTTLINGHC--KAGSFGRAYELMNLMGDEGFMPNIYTYNAAI 435
Query: 193 SGFC 196
C
Sbjct: 436 DSLC 439
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 77/186 (41%), Gaps = 18/186 (9%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMT 70
+ F ++ R+ P+V+ Y I G+ CKE K+ A L+ M
Sbjct: 342 FRLFLKLVRSDTYKPNVHTYTSMIGGY----------------CKEDKLNRAEMLFSRMK 385
Query: 71 DKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEAD 130
++G+ PN+ + +I G C M +G P+ TY + LC + A
Sbjct: 386 EQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAP 445
Query: 131 KAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTT 190
+AY++L++ GL V Y L+ C ++ + +A+ M K G D
Sbjct: 446 EAYELLNKAFSCGLEADGVTYTILIQEQC--KQNDINQALAFFCRMNKTGFEADMRLNNI 503
Query: 191 VISGFC 196
+I+ FC
Sbjct: 504 LIAAFC 509
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
LI A C++KK++E+ L++ + G+ P + ++I C M R G
Sbjct: 504 LIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHG 563
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEK 168
PD TY SL LC + D+A K+ MI RGLSP V L YC +R
Sbjct: 564 CVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYC--KRNDSAN 621
Query: 169 AVGILRVMAKR 179
A+ +L + K+
Sbjct: 622 AMILLEPLDKK 632
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 4/158 (2%)
Query: 45 SESALIVARC-KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXX 103
S L+V C ++ K++EA M +G P+ + ++ LC
Sbjct: 218 SSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRK 277
Query: 104 MNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGER 163
M G P+ + SL LC + +A+++L EM+ G P+V + L+ C +R
Sbjct: 278 MIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLC--KR 335
Query: 164 ERVEKAVGI-LRVMAKRGLSPDAVSYTTVISGFCYLDE 200
EKA + L+++ P+ +YT++I G+C D+
Sbjct: 336 GWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDK 373
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 61/138 (44%), Gaps = 2/138 (1%)
Query: 59 VREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMS 118
+ A ++ M+ +GV P+ S ++ G M ++G PD T
Sbjct: 198 IEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTL 257
Query: 119 LFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAK 178
+ LC+ ++A +MI G P+++ + L+ C ++ +++A +L M +
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLC--KKGSIKQAFEMLEEMVR 315
Query: 179 RGLSPDAVSYTTVISGFC 196
G P+ ++T +I G C
Sbjct: 316 NGWKPNVYTHTALIDGLC 333
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 2/157 (1%)
Query: 40 AGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXX 99
A N + LI CK ++ AF L+K M +G+EP+L++ + +I G
Sbjct: 283 APNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK 342
Query: 100 XXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC 159
KG+ D + S + + A V M+ +G+SP+VV Y L+ C
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 160 VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+ R+ +A G+ + KRG+ P V+Y+++I GFC
Sbjct: 403 --QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFC 437
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 8/168 (4%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + + LI C++ ++ EAFG++ + +G+EP++V+ +++I G C
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M + G PD Y L L + A + +M+ + + +VV++N L+ +C
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC-- 507
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVI------SGFCYLDEPEL 203
R ++A+ + R+M G+ PD ++TTV+ FC +P +
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTI 555
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ +I C +++ EA +++ + PN V+ +I LC M
Sbjct: 611 NTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE 670
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
KG P+ TY L + + ++K+ EM +G+SPS+V Y+ ++ C +R RV
Sbjct: 671 KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC--KRGRV 728
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
++A I L PD V+Y +I G+C
Sbjct: 729 DEATNIFHQAIDAKLLPDVVAYAILIRGYC 758
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 88/229 (38%), Gaps = 31/229 (13%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESAL-------------------IVARC 54
+ QI + GM P S+ Y+ I GF GN S AL +
Sbjct: 414 YGQILKRGMEP-SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLS 472
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
K+ + A M + + N+V N++I G C M G+ PD
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVA 532
Query: 115 TYMSLFQL------LCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEK 168
T+ ++ ++ C + ++ M +S + + N V + + + R+E
Sbjct: 533 TFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCN--VVIHLLFKCHRIED 590
Query: 169 AVGILRVMAKRGLSPDAVSYTTVISGFCY---LDEPELQWRSLQGTGRG 214
A + + + PD V+Y T+I G+C LDE E + L+ T G
Sbjct: 591 ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFG 639
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 2/157 (1%)
Query: 40 AGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXX 99
A N + LI CK ++ AF L+K M +G+EP+L++ + +I G
Sbjct: 283 APNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK 342
Query: 100 XXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC 159
KG+ D + S + + A V M+ +G+SP+VV Y L+ C
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 160 VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+ R+ +A G+ + KRG+ P V+Y+++I GFC
Sbjct: 403 --QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFC 437
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 77/151 (50%), Gaps = 2/151 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + + LI C++ ++ EAFG++ + +G+EP++V+ +++I G C
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M + G PD Y L L + A + +M+ + + +VV++N L+ +C
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC-- 507
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVI 192
R ++A+ + R+M G+ PD ++TTV+
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ +I C +++ EA +++ + PN V+ +I LC M
Sbjct: 640 NTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE 699
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
KG P+ TY L + + ++K+ EM +G+SPS+V Y+ ++ C +R RV
Sbjct: 700 KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC--KRGRV 757
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
++A I L PD V+Y +I G+C
Sbjct: 758 DEATNIFHQAIDAKLLPDVVAYAILIRGYC 787
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 83/213 (38%), Gaps = 24/213 (11%)
Query: 24 PPSVNIYNFRIRGFAGAG-------------------NFESESALIVARCKEKKVREAFG 64
PP V IY + G + G N ++LI C+ + EA
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 65 LWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLC 124
+++ M G++P++ + V++ M + GL PD Y +L C
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFC 577
Query: 125 DRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPD 184
+ ++ M +S + + N V + + + R+E A + + + PD
Sbjct: 578 KHMKPTIGLQLFDLMQRNKISADIAVCN--VVIHLLFKCHRIEDASKFFNNLIEGKMEPD 635
Query: 185 AVSYTTVISGFCY---LDEPELQWRSLQGTGRG 214
V+Y T+I G+C LDE E + L+ T G
Sbjct: 636 IVTYNTMICGYCSLRRLDEAERIFELLKVTPFG 668
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 70/168 (41%), Gaps = 7/168 (4%)
Query: 32 FRIRGFAGAG-NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCX 90
FR+ G G + + + ++ E ++ EA L+ M G+EP+ ++ +I C
Sbjct: 519 FRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCK 578
Query: 91 XXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLL--CDRCEADKAYKVLSEMIVRGLSPSV 148
M R ++ D + LL C R E A K + +I + P +
Sbjct: 579 HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE--DASKFFNNLIEGKMEPDI 636
Query: 149 VIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
V YN ++ YC R+++A I ++ P+ V+ T +I C
Sbjct: 637 VTYNTMICGYC--SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLC 682
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
Query: 45 SESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXM 104
S + LI CKE V EA L+ M+ KGV+PN ++ N +I C M
Sbjct: 471 SYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANM 530
Query: 105 NRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERE 164
G+ PD TY SL C D+A ++ SEM ++GL + V Y ++S + +
Sbjct: 531 EANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISG--LSKAG 588
Query: 165 RVEKAVGILRVMAKRGLSPDAVSYTTVI 192
+ ++A G+ M ++G + D YT +I
Sbjct: 589 KSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 78/170 (45%), Gaps = 3/170 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ LI C++ V EA ++ M KG + ++ + N + M
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMME 462
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
G+ +Y +L + C ++A ++ EM +G+ P+ + YN ++ AYC ++ ++
Sbjct: 463 GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYC--KQGKI 520
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTG-RGL 215
++A + M G+ PD+ +YT++I G C D + R G +GL
Sbjct: 521 KEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGL 570
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 8/161 (4%)
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
K K+ +A L+ M ++G+E ++ ++I C + KGL+P
Sbjct: 306 KNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSY 365
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILR 174
TY +L +C E A +++EM +G++ + V++N L+ YC + V++A I
Sbjct: 366 TYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYC--RKGMVDEASMIYD 423
Query: 175 VMAKRGLSPDAVSYTTVISGFCYL---DEPELQW--RSLQG 210
VM ++G D + T+ S F L DE + QW R ++G
Sbjct: 424 VMEQKGFQADVFTCNTIASCFNRLKRYDEAK-QWLFRMMEG 463
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 5/162 (3%)
Query: 54 CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDE 113
C+ +V ++ L K + KG++P + N +I M + G+ ++
Sbjct: 235 CRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNK 294
Query: 114 NTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGIL 173
TY L +L + A K+ EM RG+ V +Y L+S C + +++A +
Sbjct: 295 VTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNC--RKGNMKRAFLLF 352
Query: 174 RVMAKRGLSPDAVSYTTVISGFCYLDE---PELQWRSLQGTG 212
+ ++GLSP + +Y +I G C + E E+ +Q G
Sbjct: 353 DELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKG 394
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 5/179 (2%)
Query: 19 RNGMSPPSVNIYN-FRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPN 77
+NG + +++ R RG + ++LI C++ ++ AF L+ +T+KG+ P+
Sbjct: 306 KNGKMSDAEKLFDEMRERGIES--DVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPS 363
Query: 78 LVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLS 137
+ A+I G+C M KG+ + + +L C + D+A +
Sbjct: 364 SYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYD 423
Query: 138 EMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
M +G V N + S C +R ++A L M + G+ VSYT +I +C
Sbjct: 424 VMEQKGFQADVFTCNTIAS--CFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYC 480
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 25/203 (12%)
Query: 16 QIFRNGMSPPSVNI----YNFRIRGFAGAGNFESESAL-----------------IVARC 54
+I N M VNI +N I G+ G + S + +A C
Sbjct: 384 EILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASC 443
Query: 55 --KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPD 112
+ K+ EA M + GV+ + VS +I C M+ KG+ P+
Sbjct: 444 FNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPN 503
Query: 113 ENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGI 172
TY + C + + +A K+ + M G+ P Y L+ C+ + V++A+ +
Sbjct: 504 AITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIA--DNVDEAMRL 561
Query: 173 LRVMAKRGLSPDAVSYTTVISGF 195
M +GL ++V+YT +ISG
Sbjct: 562 FSEMGLKGLDQNSVTYTVMISGL 584
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 79/179 (44%), Gaps = 38/179 (21%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKG 73
FR NGM + ++++ ++ S +VA K +++ +++ M D G
Sbjct: 161 FRVYVDNGMFEEGLRVFDYMVKKGLSIDE-RSCIVFLVAAKKRRRIDLCLEIFRRMVDSG 219
Query: 74 VEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAY 133
V+ + S V++GLC R+G E +K+
Sbjct: 220 VKITVYSLTIVVEGLC----------------RRG-------------------EVEKSK 244
Query: 134 KVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVI 192
K++ E V+G+ P YN +++AY V +R+ G+L+VM K G+ + V+YT ++
Sbjct: 245 KLIKEFSVKGIKPEAYTYNTIINAY-VKQRD-FSGVEGVLKVMKKDGVVYNKVTYTLLM 301
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 4/153 (2%)
Query: 45 SESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXM 104
S +A+I CK +++ A M D+G+ PNLV+ N + G +
Sbjct: 427 SYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKL 486
Query: 105 NRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGER 163
G PD T+ + LC E A+ EM+ G+ P+ + YN L+ + C G+
Sbjct: 487 LVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDT 546
Query: 164 ERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+R +V + M + GLSPD +Y I FC
Sbjct: 547 DR---SVKLFAKMKENGLSPDLYAYNATIQSFC 576
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 71/137 (51%), Gaps = 2/137 (1%)
Query: 59 VREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMS 118
V++ G+ + + G +P++++ + +I LC M G+ P+E TY
Sbjct: 476 VKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNI 535
Query: 119 LFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAK 178
L + C + D++ K+ ++M GLSP + YN + ++C + +V+KA +L+ M +
Sbjct: 536 LIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFC--KMRKVKKAEELLKTMLR 593
Query: 179 RGLSPDAVSYTTVISGF 195
GL PD +Y+T+I
Sbjct: 594 IGLKPDNFTYSTLIKAL 610
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 4/143 (2%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S +I C+ K++++AF +K M + G+EPN ++ N +I+ C M
Sbjct: 499 SLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKE 558
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
GL+PD Y + Q C + KA ++L M+ GL P Y+ L+ A + E R
Sbjct: 559 NGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKA--LSESGRE 616
Query: 167 EKAVGILRVMAKRGLSPDAVSYT 189
+A + + + G PD SYT
Sbjct: 617 SEAREMFSSIERHGCVPD--SYT 637
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 2/146 (1%)
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
K + E ++ +GV+P ++Q L M GL
Sbjct: 367 KGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVY 426
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILR 174
+Y ++ LC + A L+EM RG+SP++V +N +S Y V R V+K G+L
Sbjct: 427 SYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSV--RGDVKKVHGVLE 484
Query: 175 VMAKRGLSPDAVSYTTVISGFCYLDE 200
+ G PD ++++ +I+ C E
Sbjct: 485 KLLVHGFKPDVITFSLIINCLCRAKE 510
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
Query: 73 GVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKA 132
G++P+ NAVI L M G PD TY L +C + D+A
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 133 YKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVI 192
+++ +M G P+V Y L+ + + RV++A+ L +M R L+P+ + T +
Sbjct: 235 IRLVKQMEQEGNRPNVFTYTILIDGFLIA--GRVDEALKQLEMMRVRKLNPNEATIRTFV 292
Query: 193 SG 194
G
Sbjct: 293 HG 294
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 4/151 (2%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S LI KE K EA LW+ M +KG +PN+V + ++ GLC M
Sbjct: 366 SVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIA 425
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERER 165
G P+ TY SL + ++A +V EM G S + Y+ L+ C VG R
Sbjct: 426 SGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVG---R 482
Query: 166 VEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
V++A+ + M G+ PD V+Y+++I G C
Sbjct: 483 VKEAMMVWSKMLTIGIKPDTVAYSSIIKGLC 513
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 7/177 (3%)
Query: 48 ALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRK 107
L+ CKE+++ EA L M +G P+ V N +I GLC M K
Sbjct: 227 TLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLK 286
Query: 108 GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVE 167
G P+E TY +L LC + + DKA +L M+ P+ V Y L++ + ++ R
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLING--LVKQRRAT 344
Query: 168 KAVGILRVMAKRGLSPDAVSYTTVISGFC---YLDEPELQWRSLQGTGRGLGPPIVL 221
AV +L M +RG + Y+ +ISG +E WR + +G P IV+
Sbjct: 345 DAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKM--AEKGCKPNIVV 399
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Query: 73 GVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKA 132
+ PN +S N VI+ LC M + PD TY +L LC D+A
Sbjct: 182 NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 133 YKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERERVEKAVGILRVMAKRGLSPDAVSYTTV 191
+L EM G SPS VIYN L+ C G+ RV K V M +G P+ V+Y T+
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVD---NMFLKGCVPNEVTYNTL 298
Query: 192 ISGFC 196
I G C
Sbjct: 299 IHGLC 303
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 2/147 (1%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
+I A CK + V A +++ M ++ P+ + ++ GLC M +G
Sbjct: 193 VIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEG 252
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEK 168
+P Y L LC + + + K++ M ++G P+ V YN L+ C+ + +++K
Sbjct: 253 CSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL--KGKLDK 310
Query: 169 AVGILRVMAKRGLSPDAVSYTTVISGF 195
AV +L M P+ V+Y T+I+G
Sbjct: 311 AVSLLERMVSSKCIPNDVTYGTLINGL 337
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 5/136 (3%)
Query: 61 EAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLF 120
EA +WK M G N + +I GLC M G+ PD Y S+
Sbjct: 450 EAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSII 509
Query: 121 QLLCDRCEADKAYKVLSEMIVR---GLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMA 177
+ LC D A K+ EM+ + P VV YN L+ C+ ++ + +AV +L M
Sbjct: 510 KGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCM--QKDISRAVDLLNSML 567
Query: 178 KRGLSPDAVSYTTVIS 193
RG PD ++ T ++
Sbjct: 568 DRGCDPDVITCNTFLN 583
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 27/215 (12%)
Query: 21 GMSPPSVNIYNFRIRGFAGAGNFE-------------------SESALIVARCKEKKVRE 61
G SP V IYN I G G+ + + LI C + K+ +
Sbjct: 252 GCSPSPV-IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDK 310
Query: 62 AFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQ 121
A L + M PN V+ +I GL M +G +++ Y L
Sbjct: 311 AVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLIS 370
Query: 122 LLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERE-RVEKAVGILRVMAKRG 180
L +A++A + +M +G P++V+Y+ LV C RE + +A IL M G
Sbjct: 371 GLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLC---REGKPNEAKEILNRMIASG 427
Query: 181 LSPDAVSYTTVISGF--CYLDEPELQ-WRSLQGTG 212
P+A +Y++++ GF L E +Q W+ + TG
Sbjct: 428 CLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTG 462
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 84/205 (40%), Gaps = 23/205 (11%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKG 73
+ F+ G+ +V ++ + F S LI C +V+EA +W M G
Sbjct: 439 MKGFFKTGLCEEAVQVWKEMDKTGCSRNKF-CYSVLIDGLCGVGRVKEAMMVWSKMLTIG 497
Query: 74 VEPNLVSSNAVIQGLCXXXXXXXXXXXXXXM---NRKGLTPDENTYMSLFQLLCDRCEAD 130
++P+ V+ +++I+GLC M PD TY L LC + +
Sbjct: 498 IKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDIS 557
Query: 131 KAYKVLSEMIVRGLSPSVVIYNKLV------SAYC-------------VGERERVEKAVG 171
+A +L+ M+ RG P V+ N + S C + +R+RV A
Sbjct: 558 RAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACT 617
Query: 172 ILRVMAKRGLSPDAVSYTTVISGFC 196
I+ VM + L+P ++ ++ C
Sbjct: 618 IVEVMLGKYLAPKTSTWAMIVREIC 642
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 2/158 (1%)
Query: 37 FAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXX 96
F N + LI CK + EA GL M + P++ + +I GLC
Sbjct: 333 FGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAE 392
Query: 97 XXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVS 156
M + + P TY SL C ++A + SEM G+ P+++ ++ L+
Sbjct: 393 ANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLID 452
Query: 157 AYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISG 194
YC ++ A+G+ M +G+ PD V+YT +I
Sbjct: 453 GYC--NVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDA 488
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 87/215 (40%), Gaps = 38/215 (17%)
Query: 42 NFESESALIVARCKEKKVREAFGLWK---------------------------------- 67
N + SA+I CK VR+A+GL+K
Sbjct: 268 NLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLF 327
Query: 68 -AMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDR 126
M GV+PNL N +I G C M L+PD TY L LC
Sbjct: 328 VHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIE 387
Query: 127 CEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAV 186
+ +A ++ +M + PS YN L+ YC + +E+A+ + M G+ P+ +
Sbjct: 388 DQVAEANRLFQKMKNERIFPSSATYNSLIHGYC--KEYNMEQALDLCSEMTASGVEPNII 445
Query: 187 SYTTVISGFCYL-DEPELQWRSLQGTGRGLGPPIV 220
+++T+I G+C + D + T +G+ P +V
Sbjct: 446 TFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVV 480
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 2/151 (1%)
Query: 50 IVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGL 109
I+ C++ K+ EA +++ M GV PNL + +A+I G C + L
Sbjct: 241 ILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAEL 300
Query: 110 TPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKA 169
P+ + +L C E A + M+ G+ P++ +YN L+ +C + + +A
Sbjct: 301 LPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHC--KSGNMLEA 358
Query: 170 VGILRVMAKRGLSPDAVSYTTVISGFCYLDE 200
VG+L M LSPD +YT +I+G C D+
Sbjct: 359 VGLLSEMESLNLSPDVFTYTILINGLCIEDQ 389
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 85/190 (44%), Gaps = 21/190 (11%)
Query: 25 PSVNIYNFRIRGFAGAGNF--------ESES-----------ALIVARCKEKKVREAFGL 65
P++ +YN I G +GN E ES LI C E +V EA L
Sbjct: 337 PNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRL 396
Query: 66 WKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCD 125
++ M ++ + P+ + N++I G C M G+ P+ T+ +L C+
Sbjct: 397 FQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCN 456
Query: 126 RCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDA 185
+ A + EM ++G+ P VV Y L+ A+ + +++A+ + M + G+ P+
Sbjct: 457 VRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAH--FKEANMKEALRLYSDMLEAGIHPND 514
Query: 186 VSYTTVISGF 195
++ ++ GF
Sbjct: 515 HTFACLVDGF 524
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 5/162 (3%)
Query: 35 RGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXX 94
R F + + S LI CKE + +A L MT GVEPN+++ + +I G C
Sbjct: 404 RIFPSSATYNS---LIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDI 460
Query: 95 XXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKL 154
M KG+ PD TY +L +A ++ S+M+ G+ P+ + L
Sbjct: 461 KAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACL 520
Query: 155 VSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
V + + R+ A+ + ++ + V +T +I G C
Sbjct: 521 VDGF--WKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLC 560
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 21/171 (12%)
Query: 26 SVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVI 85
S+ +++ I F G FE AL V+R + P+ + +++
Sbjct: 131 SIGVFSLLIMEFLEMGLFEE--ALWVSR-----------------EMKCSPDSKACLSIL 171
Query: 86 QGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLS 145
GL M +GL PD + Y LFQ + K K+L EM G+
Sbjct: 172 NGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIK 231
Query: 146 PSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
P+V IY + C ++E+A + +M K G+ P+ +Y+ +I G+C
Sbjct: 232 PNVYIYTIYILDLC--RDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYC 280
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 85/194 (43%), Gaps = 25/194 (12%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVAR-------------------CKEKKVREAFGL 65
P+V YN IRG+ E L+ CKEK++ E L
Sbjct: 310 PNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDL 369
Query: 66 WKAMT-DKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLC 124
K M + G+ P+ V+ N +I L KG D+ Y ++ LC
Sbjct: 370 MKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALC 429
Query: 125 DRCEADKAYKVLSEMIVRG-LSPSVVIYNKLVSAYC-VGERERVEKAVGILRVMAKRGLS 182
+A +++EM+ +G P VV Y +V+ +C +GE V+KA +L+VM G
Sbjct: 430 KEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGE---VDKAKKLLQVMHTHGHK 486
Query: 183 PDAVSYTTVISGFC 196
P+ VSYT +++G C
Sbjct: 487 PNTVSYTALLNGMC 500
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 80/197 (40%), Gaps = 20/197 (10%)
Query: 4 RLSSTATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAF 63
R+S L ++ G PP V Y + GF C+ +V +A
Sbjct: 433 RMSEAKDL--INEMLSKGHCPPDVVTYTAVVNGF----------------CRLGEVDKAK 474
Query: 64 GLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLL 123
L + M G +PN VS A++ G+C +P+ TY + L
Sbjct: 475 KLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGL 534
Query: 124 CDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSP 183
+ +A V+ EM+++G P V N L+ + C R +A + +G +
Sbjct: 535 RREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLC--RDGRTHEARKFMEECLNKGCAI 592
Query: 184 DAVSYTTVISGFCYLDE 200
+ V++TTVI GFC DE
Sbjct: 593 NVVNFTTVIHGFCQNDE 609
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 3/160 (1%)
Query: 44 ESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXX 103
E+ S ++V+ + ++R+A + M GVEPNL+ N I
Sbjct: 243 EAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLER 302
Query: 104 MNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGER 163
M G+ P+ TY + + CD ++A ++L +M +G P V Y ++ C +
Sbjct: 303 MQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLC--KE 360
Query: 164 ERVEKAVGILRVMAK-RGLSPDAVSYTTVISGFCYLDEPE 202
+R+ + +++ MAK GL PD V+Y T+I D +
Sbjct: 361 KRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHAD 400
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 2/144 (1%)
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
+E K+ EA + + M KG P V N ++Q LC KG +
Sbjct: 536 REGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVV 595
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILR 174
+ ++ C E D A VL +M + V Y LV +G++ R+ +A +++
Sbjct: 596 NFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDT--LGKKGRIAEATELMK 653
Query: 175 VMAKRGLSPDAVSYTTVISGFCYL 198
M +G+ P V+Y TVI +C +
Sbjct: 654 KMLHKGIDPTPVTYRTVIHRYCQM 677
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 66/143 (46%), Gaps = 3/143 (2%)
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
+ ++ +A + M G+ PN+V+ N +I+G C M+ KG PD+
Sbjct: 289 RANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKV 348
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIV-RGLSPSVVIYNKLVSAYCVGERERVEKAVGIL 173
+Y ++ LC + ++ +M GL P V YN L+ + + + + ++A+ L
Sbjct: 349 SYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLI--HMLTKHDHADEALWFL 406
Query: 174 RVMAKRGLSPDAVSYTTVISGFC 196
+ ++G D + Y+ ++ C
Sbjct: 407 KDAQEKGFRIDKLGYSAIVHALC 429
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 3/150 (2%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ LI K EA K +KG + + +A++ LC M
Sbjct: 387 NTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLS 446
Query: 107 KGLTP-DENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERER 165
KG P D TY ++ C E DKA K+L M G P+ V Y L++ C +
Sbjct: 447 KGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSL 506
Query: 166 VEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+A ++ + + SP++++Y+ ++ G
Sbjct: 507 --EAREMMNMSEEHWWSPNSITYSVIMHGL 534
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 21/197 (10%)
Query: 19 RNGMSPPSVNIYNFRIRGFAGAG-------------------NFESESALIVARCKEKKV 59
R M P+ YN I GF+ G N + +ALI E
Sbjct: 330 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 389
Query: 60 REAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSL 119
+EA ++ M KG+ P+ VS ++ GLC M R G+ TY +
Sbjct: 390 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 449
Query: 120 FQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKR 179
LC D+A +L+EM G+ P +V Y+ L++ +C R + K + + R+ +
Sbjct: 450 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI-VCRIY-RV 507
Query: 180 GLSPDAVSYTTVISGFC 196
GLSP+ + Y+T+I C
Sbjct: 508 GLSPNGIIYSTLIYNCC 524
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 21/198 (10%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVAR-------------------CKEKKVREAFGL 65
P V +N I G+FE S L+ CK+ + + A L
Sbjct: 231 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 290
Query: 66 WKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCD 125
M KGV+ ++ + N +I LC M ++ + P+E TY +L +
Sbjct: 291 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSN 350
Query: 126 RCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDA 185
+ A ++L+EM+ GLSP+ V +N L+ + ++A+ + +M +GL+P
Sbjct: 351 EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI--SEGNFKEALKMFYMMEAKGLTPSE 408
Query: 186 VSYTTVISGFCYLDEPEL 203
VSY ++ G C E +L
Sbjct: 409 VSYGVLLDGLCKNAEFDL 426
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ L+ + CK KV EA + MT G+ PN VS + +I G M +
Sbjct: 552 NVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 611
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
G P TY SL + LC +A K L + + V+YN L++A C + +
Sbjct: 612 VGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC--KSGNL 669
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
KAV + M +R + PD+ +YT++ISG C
Sbjct: 670 AKAVSLFGEMVQRSILPDSYTYTSLISGLC 699
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 22/204 (10%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFE-------------------SESALIV 51
LK F + G++P V+ Y + G F+ + + +I
Sbjct: 393 LKMFYMMEAKGLTPSEVS-YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 451
Query: 52 ARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTP 111
CK + EA L M+ G++P++V+ +A+I G C + R GL+P
Sbjct: 452 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 511
Query: 112 DENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVG 171
+ Y +L C +A ++ MI+ G + +N LV++ C + +V +A
Sbjct: 512 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLC--KAGKVAEAEE 569
Query: 172 ILRVMAKRGLSPDAVSYTTVISGF 195
+R M G+ P+ VS+ +I+G+
Sbjct: 570 FMRCMTSDGILPNTVSFDCLINGY 593
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 2/148 (1%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
LI +E ++++ +++ M G P++ + NA++ + M ++
Sbjct: 169 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 228
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEK 168
+ PD T+ L +LC +K+ ++ +M G +P++V YN ++ YC ++ R +
Sbjct: 229 ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC--KKGRFKA 286
Query: 169 AVGILRVMAKRGLSPDAVSYTTVISGFC 196
A+ +L M +G+ D +Y +I C
Sbjct: 287 AIELLDHMKSKGVDADVCTYNMLIHDLC 314
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 2/148 (1%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
LI C ++ AF L K MT G+ + + +A++ L M+++G
Sbjct: 870 LISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG 929
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEK 168
++P+ Y+ L LC + A+ V EMI + P V + +V A + + + ++
Sbjct: 930 ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA--LAKCGKADE 987
Query: 169 AVGILRVMAKRGLSPDAVSYTTVISGFC 196
A +LR M K L P S+TT++ C
Sbjct: 988 ATLLLRFMLKMKLVPTIASFTTLMHLCC 1015
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 18/185 (9%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
P+ YN I G++ G+ E AF ++ M G++ ++++ NA+
Sbjct: 341 PNTVTYNTLINGYSQQGDHEM----------------AFRFYEDMVCNGIQRDILTYNAL 384
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
I GLC ++++ L P+ +T+ +L C R AD+ +++ MI G
Sbjct: 385 IFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGC 444
Query: 145 SPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQ 204
P+ +N LVSA+C E + A +LR M +R + D+ + V +G + + +L
Sbjct: 445 HPNEQTFNMLVSAFC--RNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLV 502
Query: 205 WRSLQ 209
+ LQ
Sbjct: 503 KKLLQ 507
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 2/152 (1%)
Query: 45 SESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXM 104
S + LI C++ + A L M G++PN+V+ N +I G C M
Sbjct: 275 SYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM 334
Query: 105 NRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERE 164
+ P+ TY +L + + + A++ +M+ G+ ++ YN L+ C ++
Sbjct: 335 KAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLC--KQA 392
Query: 165 RVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+ KA ++ + K L P++ +++ +I G C
Sbjct: 393 KTRKAAQFVKELDKENLVPNSSTFSALIMGQC 424
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 2/140 (1%)
Query: 57 KKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTY 116
KK R A + M D G P + S NA + L M R ++P+ T
Sbjct: 182 KKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTL 241
Query: 117 MSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVM 176
+ C + DK ++L +M G + V YN L++ +C E+ + A+ + +M
Sbjct: 242 NMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC--EKGLLSSALKLKNMM 299
Query: 177 AKRGLSPDAVSYTTVISGFC 196
K GL P+ V++ T+I GFC
Sbjct: 300 GKSGLQPNVVTFNTLIHGFC 319
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 2/143 (1%)
Query: 54 CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDE 113
C+ K+ + L + M G VS N +I G C M + GL P+
Sbjct: 249 CRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNV 308
Query: 114 NTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGIL 173
T+ +L C + +A KV EM ++P+ V YN L++ Y ++ E A
Sbjct: 309 VTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGY--SQQGDHEMAFRFY 366
Query: 174 RVMAKRGLSPDAVSYTTVISGFC 196
M G+ D ++Y +I G C
Sbjct: 367 EDMVCNGIQRDILTYNALIFGLC 389
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 75/163 (46%), Gaps = 2/163 (1%)
Query: 44 ESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXX 103
ES +A + + + +V A ++ M + PN + N V+ G C
Sbjct: 204 ESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQD 263
Query: 104 MNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGER 163
M R G + +Y +L C++ A K+ + M GL P+VV +N L+ +C
Sbjct: 264 MERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRA-- 321
Query: 164 ERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWR 206
++++A + M ++P+ V+Y T+I+G+ + E+ +R
Sbjct: 322 MKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFR 364
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 18/185 (9%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
P+ YN I G++ G+ E AF ++ M G++ ++++ NA+
Sbjct: 341 PNTVTYNTLINGYSQQGDHEM----------------AFRFYEDMVCNGIQRDILTYNAL 384
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
I GLC ++++ L P+ +T+ +L C R AD+ +++ MI G
Sbjct: 385 IFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGC 444
Query: 145 SPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQ 204
P+ +N LVSA+C E + A +LR M +R + D+ + V +G + + +L
Sbjct: 445 HPNEQTFNMLVSAFC--RNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLV 502
Query: 205 WRSLQ 209
+ LQ
Sbjct: 503 KKLLQ 507
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 2/152 (1%)
Query: 45 SESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXM 104
S + LI C++ + A L M G++PN+V+ N +I G C M
Sbjct: 275 SYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM 334
Query: 105 NRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERE 164
+ P+ TY +L + + + A++ +M+ G+ ++ YN L+ C ++
Sbjct: 335 KAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLC--KQA 392
Query: 165 RVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+ KA ++ + K L P++ +++ +I G C
Sbjct: 393 KTRKAAQFVKELDKENLVPNSSTFSALIMGQC 424
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 2/140 (1%)
Query: 57 KKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTY 116
KK R A + M D G P + S NA + L M R ++P+ T
Sbjct: 182 KKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTL 241
Query: 117 MSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVM 176
+ C + DK ++L +M G + V YN L++ +C E+ + A+ + +M
Sbjct: 242 NMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC--EKGLLSSALKLKNMM 299
Query: 177 AKRGLSPDAVSYTTVISGFC 196
K GL P+ V++ T+I GFC
Sbjct: 300 GKSGLQPNVVTFNTLIHGFC 319
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 2/143 (1%)
Query: 54 CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDE 113
C+ K+ + L + M G VS N +I G C M + GL P+
Sbjct: 249 CRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNV 308
Query: 114 NTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGIL 173
T+ +L C + +A KV EM ++P+ V YN L++ Y ++ E A
Sbjct: 309 VTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGY--SQQGDHEMAFRFY 366
Query: 174 RVMAKRGLSPDAVSYTTVISGFC 196
M G+ D ++Y +I G C
Sbjct: 367 EDMVCNGIQRDILTYNALIFGLC 389
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 75/163 (46%), Gaps = 2/163 (1%)
Query: 44 ESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXX 103
ES +A + + + +V A ++ M + PN + N V+ G C
Sbjct: 204 ESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQD 263
Query: 104 MNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGER 163
M R G + +Y +L C++ A K+ + M GL P+VV +N L+ +C
Sbjct: 264 MERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRA-- 321
Query: 164 ERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWR 206
++++A + M ++P+ V+Y T+I+G+ + E+ +R
Sbjct: 322 MKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFR 364
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 78/165 (47%), Gaps = 2/165 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + + L+ C+ + + EA +W M D+G++P++V+ N +++GL
Sbjct: 297 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLF 356
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M KG P+ +Y + + C + + A + +M+ GL P +Y L++ + G
Sbjct: 357 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF--G 414
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWR 206
+++++ +L+ M ++G PD +Y +I PE R
Sbjct: 415 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATR 459
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 2/154 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N S + +I CK+ + A + M D G++P+ +I G
Sbjct: 367 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 426
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M KG PD TY +L +L+ ++ + A ++ ++MI + PS+ +N ++ +Y +
Sbjct: 427 KEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMA 486
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+ +AV M K+G+ PD SYT +I G
Sbjct: 487 RNYEMGRAV--WEEMIKKGICPDDNSYTVLIRGL 518
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 4/121 (3%)
Query: 76 PNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQ-LLCDRCEADKAYK 134
PN+++ ++ G C M +GL PD + + + LL R ++D A K
Sbjct: 296 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSD-AIK 354
Query: 135 VLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISG 194
+ M +G P+V Y ++ +C ++ +E A+ M GL PDA YT +I+G
Sbjct: 355 LFHVMKSKGPCPNVRSYTIMIRDFC--KQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 412
Query: 195 F 195
F
Sbjct: 413 F 413
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 54/115 (46%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ALI +K A ++ M +EP++ + N +++ M +
Sbjct: 442 NALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIK 501
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
KG+ PD+N+Y L + L ++ +A + L EM+ +G+ ++ YNK + + G
Sbjct: 502 KGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRG 556
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 20 NGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLV 79
NG +N IR + AG F+ E+ L++ M G+ P+++
Sbjct: 131 NGCVKLQDRYFNSLIRSYGNAGLFQ----------------ESVKLFQTMKQMGISPSVL 174
Query: 80 SSNAVIQGLCXXXXXXXXXXXXXXMNRK-GLTPDENTYMSLFQLLCDRCEADKAYKVLSE 138
+ N+++ L M R G+TPD T+ +L C D+A+++ +
Sbjct: 175 TFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKD 234
Query: 139 MIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRG--LSPDAVSYTTVISGFC 196
M + +P VV YN ++ C + ++ A +L M K+ + P+ VSYTT++ G+C
Sbjct: 235 MELYHCNPDVVTYNTIIDGLCRAGKVKI--AHNVLSGMLKKATDVHPNVVSYTTLVRGYC 292
Query: 197 Y---LDEPELQWRSLQGTGRGLGPPIV 220
+DE L + + RGL P V
Sbjct: 293 MKQEIDEAVLVFHDM--LSRGLKPNAV 317
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 2/152 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ LI CK V EAF ++K M P++V+ N +I GLC M +
Sbjct: 213 NTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLK 272
Query: 107 KG--LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERE 164
K + P+ +Y +L + C + E D+A V +M+ RGL P+ V YN L+ R
Sbjct: 273 KATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRY 332
Query: 165 RVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
K + I A +PDA ++ +I C
Sbjct: 333 DEIKDILIGGNDAFTTFAPDACTFNILIKAHC 364
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 76/200 (38%), Gaps = 28/200 (14%)
Query: 25 PSVNIYNFRIRGFAGAG---------------------NFESESALIVARCKEKKVREAF 63
P V YN I G AG N S + L+ C ++++ EA
Sbjct: 242 PDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAV 301
Query: 64 GLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLT--PDENTYMSLFQ 121
++ M +G++PN V+ N +I+GL N T PD T+ L +
Sbjct: 302 LVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIK 361
Query: 122 LLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCV-GERERVEKAVGIL----RVM 176
CD D A KV EM+ L P Y+ L+ C+ E +R E L ++
Sbjct: 362 AHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLL 421
Query: 177 AKRGLSPDAVSYTTVISGFC 196
K P A +Y + C
Sbjct: 422 GKDECKPLAAAYNPMFEYLC 441
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 96/241 (39%), Gaps = 38/241 (15%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFE---------------------SESALIVA 52
F + G+ P +V YN I+G + A ++ + + LI A
Sbjct: 304 FHDMLSRGLKPNAVT-YNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKA 362
Query: 53 RCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGL--- 109
C + A +++ M + + P+ S + +I+ LC + K +
Sbjct: 363 HCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLG 422
Query: 110 ----TPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLS--PSVVIYNKLVSAYCVGER 163
P Y +F+ LC + +A KV +++ RG+ PS Y L++ +C R
Sbjct: 423 KDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPS---YKTLITGHC---R 476
Query: 164 E-RVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTGRGLGPPIVLK 222
E + + A +L +M +R PD +Y +I G + E L +LQ R P+
Sbjct: 477 EGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATT 536
Query: 223 F 223
F
Sbjct: 537 F 537
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 76/161 (47%), Gaps = 2/161 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + + L+ C+ + + EA +W M D G++P++V+ N +++GL
Sbjct: 297 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLF 356
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M KG P+ +Y + + C + + A + +M+ GL P +Y L++ + G
Sbjct: 357 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF--G 414
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPE 202
+++++ +L+ M ++G PD +Y +I PE
Sbjct: 415 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPE 455
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 80/180 (44%), Gaps = 3/180 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N S + +I CK+ + A + M D G++P+ +I G
Sbjct: 367 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 426
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M KG PD TY +L +L+ ++ + ++ ++MI + PS+ +N ++ +Y V
Sbjct: 427 KEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVA 486
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGT-GRGLGPPIV 220
+ +AV M K+G+ PD SYT +I G + R L+ +G+ P++
Sbjct: 487 RNYEMGRAV--WDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLI 544
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Query: 76 PNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKV 135
PN+++ ++ G C M GL PD + + + L + A K+
Sbjct: 296 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL 355
Query: 136 LSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
M +G P+V Y ++ +C ++ +E A+ M GL PDA YT +I+GF
Sbjct: 356 FHVMKSKGPCPNVRSYTIMIRDFC--KQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 413
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 76/161 (47%), Gaps = 2/161 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + + L+ C+ + + EA +W M D G++P++V+ N +++GL
Sbjct: 296 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLF 355
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M KG P+ +Y + + C + + A + +M+ GL P +Y L++ + G
Sbjct: 356 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF--G 413
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPE 202
+++++ +L+ M ++G PD +Y +I PE
Sbjct: 414 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPE 454
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 80/180 (44%), Gaps = 3/180 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N S + +I CK+ + A + M D G++P+ +I G
Sbjct: 366 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 425
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M KG PD TY +L +L+ ++ + ++ ++MI + PS+ +N ++ +Y V
Sbjct: 426 KEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVA 485
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGT-GRGLGPPIV 220
+ +AV M K+G+ PD SYT +I G + R L+ +G+ P++
Sbjct: 486 RNYEMGRAV--WDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLI 543
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Query: 76 PNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKV 135
PN+++ ++ G C M GL PD + + + L + A K+
Sbjct: 295 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL 354
Query: 136 LSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
M +G P+V Y ++ +C ++ +E A+ M GL PDA YT +I+GF
Sbjct: 355 FHVMKSKGPCPNVRSYTIMIRDFC--KQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 412
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 88/198 (44%), Gaps = 22/198 (11%)
Query: 22 MSPPSVNIYNFRIRGFAGAGNFESE-------------------SALIVARCKEKKVREA 62
+ P SV+ +N I+GF ++E+ ++LI C+ + +A
Sbjct: 182 LRPNSVS-FNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKA 240
Query: 63 FGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQL 122
L + M K + PN V+ +++GLC M +G P Y L
Sbjct: 241 KSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSD 300
Query: 123 LCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLS 182
L R D+A +L EM R + P VVIYN LV+ C RV +A +L M +G
Sbjct: 301 LGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCT--ECRVPEAYRVLTEMQMKGCK 358
Query: 183 PDAVSYTTVISGFCYLDE 200
P+A +Y +I GFC +++
Sbjct: 359 PNAATYRMMIDGFCRIED 376
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 88/213 (41%), Gaps = 38/213 (17%)
Query: 19 RNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNL 78
+ G ++++++ +I F +S + LI ++ +A + D + PN
Sbjct: 128 KAGSVDKAIDVFH-KITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNS 186
Query: 79 VSSNAVIQG-----------------------------------LCXXXXXXXXXXXXXX 103
VS N +I+G LC
Sbjct: 187 VSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLED 246
Query: 104 MNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGER 163
M +K + P+ T+ L + LC + E ++A K++ +M RG P +V Y L+S +G+R
Sbjct: 247 MIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSD--LGKR 304
Query: 164 ERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
R+++A +L M KR + PD V Y +++ C
Sbjct: 305 GRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLC 337
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 87/189 (46%), Gaps = 7/189 (3%)
Query: 9 ATLKTFRQIFRNGMSPPSVNIYNFRI-RGFA-GAGNFESESALIVARCKEKKVREAFGLW 66
A + TF Q GM + ++++F I +G A A ++ + +IVA K K E F L
Sbjct: 308 AAIDTFCQA---GMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELI 364
Query: 67 KAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDR 126
M G P++ + VI+G+C M+ KG PD TY ++LC+
Sbjct: 365 GRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCEN 424
Query: 127 CEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAV 186
+ D+A K+ M+ +PSV YN L+S + E + + A M KR D
Sbjct: 425 RKTDEALKLYGRMVESRCAPSVQTYNMLISMF--FEMDDPDGAFNTWTEMDKRDCVQDVE 482
Query: 187 SYTTVISGF 195
+Y +I+G
Sbjct: 483 TYCAMINGL 491
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 63/153 (41%), Gaps = 5/153 (3%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ L C+ + ++A L + M + G +P + A I C M
Sbjct: 272 NVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMIT 331
Query: 107 KGLT---PDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGER 163
KG P T+ + L +A++ ++++ MI G P V Y ++ C+ E+
Sbjct: 332 KGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEK 391
Query: 164 ERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
V++A L M+ +G PD V+Y + C
Sbjct: 392 --VDEAYKFLDEMSNKGYPPDIVTYNCFLRVLC 422
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 7/176 (3%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
L+ A CK V+E L + M + V+P+ + N + G C M G
Sbjct: 240 LLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAG 298
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLS---PSVVIYNKLVSAYCVGERER 165
P+ TY + C D+A + MI +G + P+ + ++ A + + ++
Sbjct: 299 HKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVA--LAKNDK 356
Query: 166 VEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSL-QGTGRGLGPPIV 220
E+ ++ M G PD +Y VI G C ++ + ++ L + + +G P IV
Sbjct: 357 AEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIV 412
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 29/182 (15%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
SA+I CK+ +A L+ M +KG+ PN+ + N +I G C M
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGER--- 163
+ + PD T+ +L + +A K+ EM+ R + P V YN ++ +C R
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 164 --------------------------ERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCY 197
+RV++ + +LR +++RGL + +Y T+I GFC
Sbjct: 420 AKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479
Query: 198 LD 199
+D
Sbjct: 480 VD 481
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 2/148 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ LI C E +V EA L M KG+ ++V+ ++ G+C M
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+ PD Y ++ LC A + SEM+ +G++P+V YN ++ +C R
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFC--SFGRW 347
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISG 194
A +LR M +R ++PD +++ +IS
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISA 375
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 26/202 (12%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESE-------------------SALIVARC 54
F ++ G++P +V YN I GF G + +ALI A
Sbjct: 319 FSEMLEKGIAP-NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
KE K+ EA L M + + P+ V+ N++I G C M +PD
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVV 433
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILR 174
T+ ++ + C D+ ++L E+ RGL + YN L+ +C E + + A + +
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFC--EVDNLNAAQDLFQ 491
Query: 175 VMAKRGLSPDAVSYTTVISGFC 196
M G+ PD ++ ++ GFC
Sbjct: 492 EMISHGVCPDTITCNILLYGFC 513
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 6/159 (3%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+++I CK + +A K M D P++V+ N +I C ++R
Sbjct: 405 NSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+GL + TY +L C+ + A + EMI G+ P + N L+ +C E E++
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC--ENEKL 518
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQW 205
E+A+ + V+ + D V+Y +I G C + + W
Sbjct: 519 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 4/187 (2%)
Query: 10 TLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAM 69
+L TF ++ + G P V +N + G SE+ + E EA L+ M
Sbjct: 160 SLSTFGKLTKLGFQPDVVT-FNTLLHGLCLEDRI-SEALALFGYMVETGFLEAVALFDQM 217
Query: 70 TDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEA 129
+ G+ P +++ N +I GLC M KGL D TY ++ +C +
Sbjct: 218 VEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDT 277
Query: 130 DKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYT 189
A +LS+M + P VVIY+ ++ C A + M ++G++P+ +Y
Sbjct: 278 KSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHH--SDAQYLFSEMLEKGIAPNVFTYN 335
Query: 190 TVISGFC 196
+I GFC
Sbjct: 336 CMIDGFC 342
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 2/149 (1%)
Query: 48 ALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRK 107
++ CK + A L M + ++P++V +A+I LC M K
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 108 GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVE 167
G+ P+ TY + C A ++L +MI R ++P V+ +N L+SA V E + E
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA-SVKEGKLFE 384
Query: 168 KAVGILRVMAKRGLSPDAVSYTTVISGFC 196
A + M R + PD V+Y ++I GFC
Sbjct: 385 -AEKLCDEMLHRCIFPDTVTYNSMIYGFC 412
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 75/187 (40%), Gaps = 17/187 (9%)
Query: 25 PSVNIYNFRIRGFAGAGNFESE---------------SALIVARCKEKKVREAFGLWKAM 69
P YN I GF F+ + +I C+ K+V E L + +
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREI 458
Query: 70 TDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEA 129
+ +G+ N + N +I G C M G+ PD T L C+ +
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Query: 130 DKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYT 189
++A ++ + + + V YN ++ C G + V++A + + G+ PD +Y
Sbjct: 519 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSK--VDEAWDLFCSLPIHGVEPDVQTYN 576
Query: 190 TVISGFC 196
+ISGFC
Sbjct: 577 VMISGFC 583
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 73/184 (39%), Gaps = 19/184 (10%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMT 70
++ R+I R G+ + YN I GF C+ + A L++ M
Sbjct: 452 MQLLREISRRGLVANTTT-YNTLIHGF----------------CEVDNLNAAQDLFQEMI 494
Query: 71 DKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEAD 130
GV P+ ++ N ++ G C + + D Y + +C + D
Sbjct: 495 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554
Query: 131 KAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTT 190
+A+ + + + G+ P V YN ++S +C + + A + M G PD +Y T
Sbjct: 555 EAWDLFCSLPIHGVEPDVQTYNVMISGFC--GKSAISDANVLFHKMKDNGHEPDNSTYNT 612
Query: 191 VISG 194
+I G
Sbjct: 613 LIRG 616
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 62 AFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQ 121
A L++ M + + N+ S N +I+ C + + G PD T+ +L
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 122 LLC--DRCEAD-------------KAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
LC DR +A + +M+ GL+P V+ +N L++ C+ RV
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCL--EGRV 242
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+A ++ M +GL D V+Y T+++G C
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 20/157 (12%)
Query: 8 TATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFE-------------------SESA 48
A F+++ +G+ P ++ N + GF E + +
Sbjct: 484 NAAQDLFQEMISHGVCPDTITC-NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
+I CK KV EA+ L+ ++ GVEP++ + N +I G C M G
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLS 145
PD +TY +L + E DK+ +++SEM G S
Sbjct: 603 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFS 639
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 80/195 (41%), Gaps = 21/195 (10%)
Query: 21 GMSPPSVNIYNFRIRGFAGAGNFESESAL-------------------IVARCKEKKVRE 61
G+ P+ YN ++GF G E L + + K E
Sbjct: 285 GLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIE 344
Query: 62 AFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQ 121
A + K MTDKG+ P++ S N ++ GLC M R G+ PD TY L
Sbjct: 345 AETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLH 404
Query: 122 LLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGL 181
C + D A +L EM+ P+ N L+ + + + R+ +A +LR M ++G
Sbjct: 405 GYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILL--HSLWKMGRISEAEELLRKMNEKGY 462
Query: 182 SPDAVSYTTVISGFC 196
D V+ ++ G C
Sbjct: 463 GLDTVTCNIIVDGLC 477
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S L+ CK + EA L+ M + ++P+ V+ N I C M +
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
KG TY SL L + + + + ++ EM +G+SP++ YN + C G E+V
Sbjct: 588 KGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEG--EKV 645
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
E A +L M ++ ++P+ S+ +I FC
Sbjct: 646 EDATNLLDEMMQKNIAPNVFSFKYLIEAFC 675
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 22/176 (12%)
Query: 23 SPPSVNIYNFRIRGFAGAGNFESESALIVARC-KEKKVREAFGLWKAMTDKGVEPNLVSS 81
+ PSV +YN L++ C KE++V L+K M G+ P +
Sbjct: 108 NKPSVYLYN-----------------LLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTF 150
Query: 82 NAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIV 141
N +I+ LC M KG P+E T+ L + C DK ++L+ M
Sbjct: 151 NLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMES 210
Query: 142 RGLSPSVVIYNKLVSAYC-VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
G+ P+ VIYN +VS++C G + EK V +R + GL PD V++ + IS C
Sbjct: 211 FGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMR---EEGLVPDIVTFNSRISALC 263
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 85/235 (36%), Gaps = 56/235 (23%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAG-------------------NFESESALIVARC 54
F ++ + P SV YN I F G + E+ ++LI+
Sbjct: 547 FAEMMGEKLQPDSV-AYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLG 605
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
+ ++ E GL M +KG+ PN+ + N IQ LC M +K + P+
Sbjct: 606 IKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVF 665
Query: 115 TYMSLFQLLCDRCEAD----------------------------------KAYKVLSEMI 140
++ L + C + D KA ++L ++
Sbjct: 666 SFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVL 725
Query: 141 VRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
RG +Y LV + C +++ +E A GIL M RG D + VI G
Sbjct: 726 DRGFELGTFLYKDLVESLC--KKDELEVASGILHKMIDRGYGFDPAALMPVIDGL 778
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 76 PNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKV 135
P+L++ + ++ GLC M + L PD Y C + + A++V
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 136 LSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
L +M +G S+ YN L+ +G + ++ + G++ M ++G+SP+ +Y T I
Sbjct: 582 LKDMEKKGCHKSLETYNSLILG--LGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYL 639
Query: 196 C 196
C
Sbjct: 640 C 640
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 2/172 (1%)
Query: 41 GNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXX 100
GN + LI A C V +A ++ M + G P+ A+I GLC
Sbjct: 474 GNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRV 533
Query: 101 XXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCV 160
+ G + D Y L L CD+ A+K Y++L++M G P + YN L+S +
Sbjct: 534 VEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFF-- 591
Query: 161 GERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTG 212
G+ + E ++ M + GL P +Y VI +C + E + + + G
Sbjct: 592 GKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 18/172 (10%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
P+ YN I G+ AG E+ +V+R KE +++ PN+V+ N +
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKE-VVSRMKEDEIK---------------PNVVTVNTI 447
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
+ G+C M ++G+ + TYM+L C +KA +M+ G
Sbjct: 448 VGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGC 507
Query: 145 SPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
SP IY L+S C R+ A+ ++ + + G S D ++Y +I FC
Sbjct: 508 SPDAKIYYALISGLCQVRRDH--DAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 22/202 (10%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESES-------------------ALIVARC 54
+Q + G+ P +Y I GF GN+ S +I C
Sbjct: 236 LKQGLKQGLDPGQY-VYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLC 294
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
KK EA+ ++K + DKG P+ V +I+G C M +KG+ P+E
Sbjct: 295 MNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEF 354
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILR 174
Y + R E +EM+ G +++ N ++ +C + ++A I +
Sbjct: 355 AYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFC--SHGKSDEAFEIFK 412
Query: 175 VMAKRGLSPDAVSYTTVISGFC 196
M++ G++P+A++Y +I GFC
Sbjct: 413 NMSETGVTPNAITYNALIKGFC 434
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 79/199 (39%), Gaps = 39/199 (19%)
Query: 35 RGFAGAGNFESESALI--VARC--KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCX 90
+ F F+ E L+ +C +E V EA ++ + D G+ ++V+ N+V+ G
Sbjct: 133 KSFLDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLK 192
Query: 91 XXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVI 150
M D L + LCD + + Y++L + + +GL P +
Sbjct: 193 ARKLDRFWELHKEMVESEF--DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYV 250
Query: 151 YNKLVSAYC-VGE--------------------------------RERVEKAVGILRVMA 177
Y KL+S +C +G ++ +A I + +
Sbjct: 251 YAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLK 310
Query: 178 KRGLSPDAVSYTTVISGFC 196
+G +PD V YTT+I GFC
Sbjct: 311 DKGYAPDRVVYTTMIRGFC 329
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 89/207 (42%), Gaps = 24/207 (11%)
Query: 10 TLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLW-KA 68
L+ F ++ G++P V YN I GF KEK + A LW +
Sbjct: 203 ALELFDEMSERGVAP-DVTCYNILIDGFL----------------KEKDHKTAMELWDRL 245
Query: 69 MTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCE 128
+ D V PN+ + N +I GL M + D TY SL LCD
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGN 305
Query: 129 ADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSY 188
DKA V +E+ R S VV YN ++ +C ++++++ + R+M + S + VSY
Sbjct: 306 VDKAESVFNELDERKASIDVVTYNTMLGGFC--RCGKIKESLELWRIMEHKN-SVNIVSY 362
Query: 189 TTVISGFC---YLDEPELQWRSLQGTG 212
+I G +DE + WR + G
Sbjct: 363 NILIKGLLENGKIDEATMIWRLMPAKG 389
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 79/184 (42%), Gaps = 21/184 (11%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKG 73
R++ +NG P V+ YN I G AG F SA + K M + G
Sbjct: 487 LREMGKNGCRPTVVS-YNILICGLCKAGKFGEASAFV----------------KEMLENG 529
Query: 74 VEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAY 133
+P+L + + ++ GLC + GL D + L LC + D A
Sbjct: 530 WKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAM 589
Query: 134 KVLSEMIVRGLSPSVVIYNKLVSAYC-VGERERVEKAVGILRVMAKRGLSPDAVSYTTVI 192
V++ M R + ++V YN L+ + VG+ R A I M K GL PD +SY T++
Sbjct: 590 TVMANMEHRNCTANLVTYNTLMEGFFKVGDSNR---ATVIWGYMYKMGLQPDIISYNTIM 646
Query: 193 SGFC 196
G C
Sbjct: 647 KGLC 650
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 10/154 (6%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+++I CK+K++ EA L K M+ GVE N NA+I GL M +
Sbjct: 433 ASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK 492
Query: 107 KGLTPDENTYMSLFQLLCDRCEADK---AYKVLSEMIVRGLSPSVVIYNKLVSAYCVGER 163
G P T +S L+C C+A K A + EM+ G P + Y+ L+ C R
Sbjct: 493 NGCRP---TVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLC---R 546
Query: 164 ER-VEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+R ++ A+ + + GL D + + +I G C
Sbjct: 547 DRKIDLALELWHQFLQSGLETDVMMHNILIHGLC 580
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 67/165 (40%), Gaps = 2/165 (1%)
Query: 32 FRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXX 91
+RI + N S + LI + K+ EA +W+ M KG + + I GLC
Sbjct: 348 WRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVN 407
Query: 92 XXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIY 151
+ G D Y S+ LC + ++A ++ EM G+ + +
Sbjct: 408 GYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVC 467
Query: 152 NKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
N L+ + R+ +A LR M K G P VSY +I G C
Sbjct: 468 NALIGG--LIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLC 510
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 3/142 (2%)
Query: 54 CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDE 113
C+ K++E+ LW+ M K N+VS N +I+GL M KG D+
Sbjct: 336 CRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADK 394
Query: 114 NTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGIL 173
TY LC +KA V+ E+ G V Y ++ C+ +++R+E+A ++
Sbjct: 395 TTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIID--CLCKKKRLEEASNLV 452
Query: 174 RVMAKRGLSPDAVSYTTVISGF 195
+ M+K G+ ++ +I G
Sbjct: 453 KEMSKHGVELNSHVCNALIGGL 474
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 80/194 (41%), Gaps = 5/194 (2%)
Query: 4 RLSSTATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAF 63
+ L + +N M +++++ F S + L+ A + K+ +
Sbjct: 75 KCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVE 134
Query: 64 GLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLL 123
L+ GV PNL + N +I+ C M ++G PD +Y ++ L
Sbjct: 135 SLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDL 194
Query: 124 CDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGIL--RVMAKRGL 181
+ D A ++ EM RG++P V YN L+ + +E+ K L R++ +
Sbjct: 195 AKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFL---KEKDHKTAMELWDRLLEDSSV 251
Query: 182 SPDAVSYTTVISGF 195
P+ ++ +ISG
Sbjct: 252 YPNVKTHNIMISGL 265
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 2/172 (1%)
Query: 41 GNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXX 100
GN + LI A C V +A ++ M + G P+ A+I GLC
Sbjct: 474 GNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRV 533
Query: 101 XXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCV 160
+ G + D Y L L CD+ A+K Y++L++M G P + YN L+S +
Sbjct: 534 VEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFF-- 591
Query: 161 GERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTG 212
G+ + E ++ M + GL P +Y VI +C + E + + + G
Sbjct: 592 GKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 18/172 (10%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
P+ YN I G+ AG E+ +V+R KE +++ PN+V+ N +
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKE-VVSRMKEDEIK---------------PNVVTVNTI 447
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
+ G+C M ++G+ + TYM+L C +KA +M+ G
Sbjct: 448 VGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGC 507
Query: 145 SPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
SP IY L+S C R+ A+ ++ + + G S D ++Y +I FC
Sbjct: 508 SPDAKIYYALISGLCQVRRDH--DAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 29/182 (15%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
SA+I CK+ +A L+ M +KG+ PN+ + N +I G C M
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGER--- 163
+ + PD T+ +L + +A K+ EM+ R + P V YN ++ +C R
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 164 --------------------------ERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCY 197
+RV++ + +LR +++RGL + +Y T+I GFC
Sbjct: 420 AKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479
Query: 198 LD 199
+D
Sbjct: 480 VD 481
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 2/148 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ LI C E +V EA L M KG+ ++V+ ++ G+C M
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+ PD Y ++ LC A + SEM+ +G++P+V YN ++ +C R
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFC--SFGRW 347
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISG 194
A +LR M +R ++PD +++ +IS
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISA 375
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 26/202 (12%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESE-------------------SALIVARC 54
F ++ G++P +V YN I GF G + +ALI A
Sbjct: 319 FSEMLEKGIAP-NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
KE K+ EA L M + + P+ V+ N++I G C M +PD
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVV 433
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILR 174
T+ ++ + C D+ ++L E+ RGL + YN L+ +C E + + A + +
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFC--EVDNLNAAQDLFQ 491
Query: 175 VMAKRGLSPDAVSYTTVISGFC 196
M G+ PD ++ ++ GFC
Sbjct: 492 EMISHGVCPDTITCNILLYGFC 513
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 4/187 (2%)
Query: 10 TLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAM 69
+L TF ++ + G P V +N + G SE+ + E EA L+ M
Sbjct: 160 SLSTFGKLTKLGFQPDVVT-FNTLLHGLCLEDRI-SEALALFGYMVETGFLEAVALFDQM 217
Query: 70 TDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEA 129
+ G+ P +++ N +I GLC M KGL D TY ++ +C +
Sbjct: 218 VEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDT 277
Query: 130 DKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYT 189
A +LS+M + P VVIY+ ++ C A + M ++G++P+ +Y
Sbjct: 278 KSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHH--SDAQYLFSEMLEKGIAPNVFTYN 335
Query: 190 TVISGFC 196
+I GFC
Sbjct: 336 CMIDGFC 342
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 6/159 (3%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+++I CK + +A K M D P++V+ N +I C ++R
Sbjct: 405 NSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+GL + TY +L C+ + A + EMI G+ P + N L+ +C E E++
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC--ENEKL 518
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQW 205
E+A+ + V+ + D V+Y +I G C + + W
Sbjct: 519 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 85/202 (42%), Gaps = 22/202 (10%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIV-------------------ARC 54
F Q+ G++P + +N I G G +AL+ C
Sbjct: 214 FDQMVEIGLTPVVIT-FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
K + A L M + ++P++V +A+I LC M KG+ P+
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILR 174
TY + C A ++L +MI R ++P V+ +N L+SA V E + E A +
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA-SVKEGKLFE-AEKLCD 390
Query: 175 VMAKRGLSPDAVSYTTVISGFC 196
M R + PD V+Y ++I GFC
Sbjct: 391 EMLHRCIFPDTVTYNSMIYGFC 412
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 75/187 (40%), Gaps = 17/187 (9%)
Query: 25 PSVNIYNFRIRGFAGAGNFESE---------------SALIVARCKEKKVREAFGLWKAM 69
P YN I GF F+ + +I C+ K+V E L + +
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREI 458
Query: 70 TDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEA 129
+ +G+ N + N +I G C M G+ PD T L C+ +
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Query: 130 DKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYT 189
++A ++ + + + V YN ++ C G + V++A + + G+ PD +Y
Sbjct: 519 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSK--VDEAWDLFCSLPIHGVEPDVQTYN 576
Query: 190 TVISGFC 196
+ISGFC
Sbjct: 577 VMISGFC 583
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 73/184 (39%), Gaps = 19/184 (10%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMT 70
++ R+I R G+ + YN I GF C+ + A L++ M
Sbjct: 452 MQLLREISRRGLVANTTT-YNTLIHGF----------------CEVDNLNAAQDLFQEMI 494
Query: 71 DKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEAD 130
GV P+ ++ N ++ G C + + D Y + +C + D
Sbjct: 495 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554
Query: 131 KAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTT 190
+A+ + + + G+ P V YN ++S +C + + A + M G PD +Y T
Sbjct: 555 EAWDLFCSLPIHGVEPDVQTYNVMISGFC--GKSAISDANVLFHKMKDNGHEPDNSTYNT 612
Query: 191 VISG 194
+I G
Sbjct: 613 LIRG 616
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 62 AFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQ 121
A L++ M + + N+ S N +I+ C + + G PD T+ +L
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 122 LLC--DRCEAD-------------KAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
LC DR +A + +M+ GL+P V+ +N L++ C+ RV
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCL--EGRV 242
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+A ++ M +GL D V+Y T+++G C
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 20/157 (12%)
Query: 8 TATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFE-------------------SESA 48
A F+++ +G+ P ++ N + GF E + +
Sbjct: 484 NAAQDLFQEMISHGVCPDTITC-NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
+I CK KV EA+ L+ ++ GVEP++ + N +I G C M G
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLS 145
PD +TY +L + E DK+ +++SEM G S
Sbjct: 603 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFS 639
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 76/150 (50%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S ++ CK ++ EA L+ M G+ P+LV+ + VI GLC M
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
K + P+ T+ +L LC + +A +L +I G + +V+YN ++ Y + +
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY--AKSGCI 484
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
E+A+ + +V+ + G++P ++ ++I G+C
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYC 514
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 9/158 (5%)
Query: 45 SESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXM 104
S + LI C + EA L M GVEP+ V+ N + +G M
Sbjct: 259 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDM 318
Query: 105 NRKGLTPDENTYMSLFQLLCDRCE---ADKAYKVLSEMIVRGLS-PSVVIYNKLVSAYCV 160
KGL+PD TY L LC +C+ D +L +M+ RG S++ + ++S C
Sbjct: 319 LDKGLSPDVITYTIL---LCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLC- 374
Query: 161 GERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYL 198
+ R+++A+ + M GLSPD V+Y+ VI G C L
Sbjct: 375 -KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL 411
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 24/206 (11%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFE-------------------SESALIV 51
L F Q+ +G+SP V Y+ I G G F+ + AL++
Sbjct: 383 LSLFNQMKADGLSPDLV-AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLL 441
Query: 52 ARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTP 111
C++ + EA L ++ G ++V N VI G + G+TP
Sbjct: 442 GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP 501
Query: 112 DENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERERVEKAV 170
T+ SL C +A K+L + + GL+PSVV Y L+ AY G + +++
Sbjct: 502 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDE-- 559
Query: 171 GILRVMAKRGLSPDAVSYTTVISGFC 196
+ R M G+ P V+Y+ + G C
Sbjct: 560 -LRREMKAEGIPPTNVTYSVIFKGLC 584
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 2/157 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + S ++ C+++K+ +A + K + P++VS N+++ G C
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
+ + GL P ++ L LC +A ++ S+M G+ P V YN L + +
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL- 304
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYL 198
+ A ++R M +GLSPD ++YT ++ G C L
Sbjct: 305 -LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQL 340
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 86/224 (38%), Gaps = 34/224 (15%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFE-------------------SESALIV 51
L+ F+ + G++P SV +N I G+ N S + L+
Sbjct: 488 LELFKVVIETGITP-SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 52 ARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXX-------- 103
A + L + M +G+ P V+ + + +GLC
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606
Query: 104 ----MNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC 159
M +G+ PD+ TY ++ Q LC A+ L M R L S YN L+ + C
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 666
Query: 160 VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPEL 203
V + KA + + ++ +S +YTT+I C +PE+
Sbjct: 667 V--YGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEM 708
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 78/190 (41%), Gaps = 6/190 (3%)
Query: 7 STATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLW 66
+T ++ R+ + PP+ Y+ +G E+ + ++ R EK + GL
Sbjct: 553 NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ---GL- 608
Query: 67 KAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDR 126
+ M +G+ P+ ++ N +IQ LC M + L TY L LC
Sbjct: 609 RDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVY 668
Query: 127 CEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAV 186
KA + + + +S S Y L+ A+CV + E AV + + RG +
Sbjct: 669 GYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCV--KGDPEMAVKLFHQLLHRGFNVSIR 726
Query: 187 SYTTVISGFC 196
Y+ VI+ C
Sbjct: 727 DYSAVINRLC 736
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 73/202 (36%), Gaps = 33/202 (16%)
Query: 26 SVNIYNFRIRGFAGAGNFESE-------------------SALIVARCKEKKVREAFGLW 66
+ +YN I G+A +G E ++LI CK + + EA +
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Query: 67 KAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDR 126
+ G+ P++VS ++ M +G+ P TY +F+ LC
Sbjct: 527 DVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRG 586
Query: 127 CEADKAYKVLSEMIV------------RGLSPSVVIYNKLVSAYCVGERERVEKAVGILR 174
+ + VL E I G+ P + YN ++ C + + A L
Sbjct: 587 WKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLC--RVKHLSGAFVFLE 644
Query: 175 VMAKRGLSPDAVSYTTVISGFC 196
+M R L + +Y +I C
Sbjct: 645 IMKSRNLDASSATYNILIDSLC 666
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 76/150 (50%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S ++ CK ++ EA L+ M G+ P+LV+ + VI GLC M
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
K + P+ T+ +L LC + +A +L +I G + +V+YN ++ Y + +
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY--AKSGCI 484
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
E+A+ + +V+ + G++P ++ ++I G+C
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYC 514
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 9/158 (5%)
Query: 45 SESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXM 104
S + LI C + EA L M GVEP+ V+ N + +G M
Sbjct: 259 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDM 318
Query: 105 NRKGLTPDENTYMSLFQLLCDRCE---ADKAYKVLSEMIVRGLS-PSVVIYNKLVSAYCV 160
KGL+PD TY L LC +C+ D +L +M+ RG S++ + ++S C
Sbjct: 319 LDKGLSPDVITYTIL---LCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLC- 374
Query: 161 GERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYL 198
+ R+++A+ + M GLSPD V+Y+ VI G C L
Sbjct: 375 -KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL 411
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 24/206 (11%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFE-------------------SESALIV 51
L F Q+ +G+SP V Y+ I G G F+ + AL++
Sbjct: 383 LSLFNQMKADGLSPDLVA-YSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLL 441
Query: 52 ARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTP 111
C++ + EA L ++ G ++V N VI G + G+TP
Sbjct: 442 GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP 501
Query: 112 DENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERERVEKAV 170
T+ SL C +A K+L + + GL+PSVV Y L+ AY G + +++
Sbjct: 502 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDE-- 559
Query: 171 GILRVMAKRGLSPDAVSYTTVISGFC 196
+ R M G+ P V+Y+ + G C
Sbjct: 560 -LRREMKAEGIPPTNVTYSVIFKGLC 584
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 2/157 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + S ++ C+++K+ +A + K + P++VS N+++ G C
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
+ + GL P ++ L LC +A ++ S+M G+ P V YN L + +
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL- 304
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYL 198
+ A ++R M +GLSPD ++YT ++ G C L
Sbjct: 305 -LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQL 340
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 86/224 (38%), Gaps = 34/224 (15%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFE-------------------SESALIV 51
L+ F+ + G++P SV +N I G+ N S + L+
Sbjct: 488 LELFKVVIETGITP-SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 52 ARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXX-------- 103
A + L + M +G+ P V+ + + +GLC
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606
Query: 104 ----MNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC 159
M +G+ PD+ TY ++ Q LC A+ L M R L S YN L+ + C
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 666
Query: 160 VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPEL 203
V + KA + + ++ +S +YTT+I C +PE+
Sbjct: 667 V--YGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEM 708
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 78/190 (41%), Gaps = 6/190 (3%)
Query: 7 STATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLW 66
+T ++ R+ + PP+ Y+ +G E+ + ++ R EK + GL
Sbjct: 553 NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ---GL- 608
Query: 67 KAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDR 126
+ M +G+ P+ ++ N +IQ LC M + L TY L LC
Sbjct: 609 RDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVY 668
Query: 127 CEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAV 186
KA + + + +S S Y L+ A+CV + E AV + + RG +
Sbjct: 669 GYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCV--KGDPEMAVKLFHQLLHRGFNVSIR 726
Query: 187 SYTTVISGFC 196
Y+ VI+ C
Sbjct: 727 DYSAVINRLC 736
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 73/202 (36%), Gaps = 33/202 (16%)
Query: 26 SVNIYNFRIRGFAGAGNFESE-------------------SALIVARCKEKKVREAFGLW 66
+ +YN I G+A +G E ++LI CK + + EA +
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Query: 67 KAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDR 126
+ G+ P++VS ++ M +G+ P TY +F+ LC
Sbjct: 527 DVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRG 586
Query: 127 CEADKAYKVLSEMIV------------RGLSPSVVIYNKLVSAYCVGERERVEKAVGILR 174
+ + VL E I G+ P + YN ++ C + + A L
Sbjct: 587 WKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLC--RVKHLSGAFVFLE 644
Query: 175 VMAKRGLSPDAVSYTTVISGFC 196
+M R L + +Y +I C
Sbjct: 645 IMKSRNLDASSATYNILIDSLC 666
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 48 ALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRK 107
+L+ C + EA L + G EPN+V N +I LC M +
Sbjct: 154 SLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKM 213
Query: 108 GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVE 167
G+ PD TY SL L + ++LS+M+ G+SP V+ ++ L+ Y G+ ++
Sbjct: 214 GIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVY--GKEGQLL 271
Query: 168 KAVGILRVMAKRGLSPDAVSYTTVISGFC---YLDEPE 202
+A M +R ++P+ V+Y ++I+G C LDE +
Sbjct: 272 EAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAK 309
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 3/180 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + ++LI C + EA + + KG PN V+ N +I G C
Sbjct: 288 NIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKIL 347
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M+R G+ D TY +L+Q C + A KVL M+ G+ P + +N L+ C
Sbjct: 348 CVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLC-- 405
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTG-RGLGPPIV 220
+ ++ KA+ L + K ++Y +I G C D+ E W +G+ P ++
Sbjct: 406 DHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVI 465
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 37/199 (18%)
Query: 33 RIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXX 92
+I G N + +I + C++ +V A + K M G+ P++V+ N++I L
Sbjct: 174 QIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSG 233
Query: 93 XXXXXXXXXXXMNRKGLTPDE-----------------------------------NTYM 117
M R G++PD TY
Sbjct: 234 TWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYN 293
Query: 118 SLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMA 177
SL LC D+A KVL+ ++ +G P+ V YN L++ YC + +RV+ + IL VM+
Sbjct: 294 SLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYC--KAKRVDDGMKILCVMS 351
Query: 178 KRGLSPDAVSYTTVISGFC 196
+ G+ D +Y T+ G+C
Sbjct: 352 RDGVDGDTFTYNTLYQGYC 370
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 65/151 (43%), Gaps = 4/151 (2%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
SALI KE ++ EA + M + V PN+V+ N++I GLC +
Sbjct: 258 SALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVS 317
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERER 165
KG P+ TY +L C D K+L M G+ YN L YC G+
Sbjct: 318 KGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSA 377
Query: 166 VEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
EK +G M G+ PD ++ ++ G C
Sbjct: 378 AEKVLG---RMVSCGVHPDMYTFNILLDGLC 405
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 3/175 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S L++A K K L++ + G+ +L S +I C M +
Sbjct: 83 SRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMK 142
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
G P T+ SL C +A ++ +++ G P+VVIYN ++ + C E+ +V
Sbjct: 143 LGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLC--EKGQV 200
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTGR-GLGPPIV 220
A+ +L+ M K G+ PD V+Y ++I+ + + R L R G+ P ++
Sbjct: 201 NTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVI 255
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 2/154 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + + LI CK K+V + + M+ GV+ + + N + QG C
Sbjct: 323 NAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVL 382
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M G+ PD T+ L LCD + KA L ++ ++ YN ++ C
Sbjct: 383 GRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLC-- 440
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+ ++VE A + +A +G+SPD ++Y T++ G
Sbjct: 441 KADKVEDAWYLFCSLALKGVSPDVITYITMMIGL 474
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 7/184 (3%)
Query: 40 AGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXX 99
+ + S + LI C+ ++ A M G EP++V+ +++ G C
Sbjct: 111 SHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMS 170
Query: 100 XXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC 159
+ G P+ Y ++ LC++ + + A VL M G+ P VV YN L++
Sbjct: 171 LVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLF 230
Query: 160 VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF---CYLDEPELQWRSLQGTGRGLG 216
V + IL M + G+SPD ++++ +I + L E + Q+ + R +
Sbjct: 231 HSGTWGV--SARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEM--IQRSVN 286
Query: 217 PPIV 220
P IV
Sbjct: 287 PNIV 290
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 2/142 (1%)
Query: 54 CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDE 113
C + RE + M ++G EP+LV+ N ++ C M R+ + PD
Sbjct: 247 CNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDL 306
Query: 114 NTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGIL 173
TY SL + LC +A++ M+ RG+ P + YN L+ AYC + ++++ +L
Sbjct: 307 VTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYC--KEGMMQQSKKLL 364
Query: 174 RVMAKRGLSPDAVSYTTVISGF 195
M + PD + ++ GF
Sbjct: 365 HEMLGNSVVPDRFTCKVIVEGF 386
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 59 VREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMS 118
V E F +++ + D G ++V+ N ++ GL M R G+ P+ T+
Sbjct: 182 VEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNI 241
Query: 119 LFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAK 178
L + C+ + L +M G P +V YN LVS+YC R R+++A + ++M +
Sbjct: 242 LTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYC--RRGRLKEAFYLYKIMYR 299
Query: 179 RGLSPDAVSYTTVISGFC 196
R + PD V+YT++I G C
Sbjct: 300 RRVVPDLVTYTSLIKGLC 317
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 2/138 (1%)
Query: 59 VREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMS 118
+ + + ++ M G+ PN + N + C M +G PD TY +
Sbjct: 217 MEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNT 276
Query: 119 LFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAK 178
L C R +A+ + M R + P +V Y L+ C + RV +A M
Sbjct: 277 LVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLC--KDGRVREAHQTFHRMVD 334
Query: 179 RGLSPDAVSYTTVISGFC 196
RG+ PD +SY T+I +C
Sbjct: 335 RGIKPDCMSYNTLIYAYC 352
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 65/141 (46%)
Query: 7 STATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLW 66
+T T +F N + V+ + ++ + + + L+ + C+ +++EAF L+
Sbjct: 235 NTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLY 294
Query: 67 KAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDR 126
K M + V P+LV+ ++I+GLC M +G+ PD +Y +L C
Sbjct: 295 KIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKE 354
Query: 127 CEADKAYKVLSEMIVRGLSPS 147
++ K+L EM+ + P
Sbjct: 355 GMMQQSKKLLHEMLGNSVVPD 375
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 2/131 (1%)
Query: 65 LWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLC 124
L + M G+ P+ + N +I M G + D+ TY +L +
Sbjct: 266 LVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYG 325
Query: 125 DRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPD 184
+A KVL+EM++ G SPS+V YN L+SAY +++A+ + MA++G PD
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAY--ARDGMLDEAMELKNQMAEKGTKPD 383
Query: 185 AVSYTTVISGF 195
+YTT++SGF
Sbjct: 384 VFTYTTLLSGF 394
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 86/186 (46%), Gaps = 11/186 (5%)
Query: 35 RGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXX 94
RGF+ + + ++++ + + V +A G+ M ++G P++ + N+++
Sbjct: 623 RGFSP--DITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADF 680
Query: 95 XXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKL 154
+ KG+ PD +Y ++ C A ++ SEM G+ P V+ YN
Sbjct: 681 GKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTF 740
Query: 155 VSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYL---DEPELQWRSLQGT 211
+ +Y E+A+G++R M K G P+ +Y +++ G+C L DE +L L
Sbjct: 741 IGSYAADSM--FEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL--- 795
Query: 212 GRGLGP 217
R L P
Sbjct: 796 -RNLDP 800
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 83/205 (40%), Gaps = 22/205 (10%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFE-------------------SESALIV 51
+K ++ NG SP S+ YN I +A G + + + L+
Sbjct: 334 MKVLNEMVLNGFSP-SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 52 ARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTP 111
+ KV A +++ M + G +PN+ + NA I+ +N GL+P
Sbjct: 393 GFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP 452
Query: 112 DENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVG 171
D T+ +L + + V EM G P +N L+SAY E+A+
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY--SRCGSFEQAMT 510
Query: 172 ILRVMAKRGLSPDAVSYTTVISGFC 196
+ R M G++PD +Y TV++
Sbjct: 511 VYRRMLDAGVTPDLSTYNTVLAALA 535
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 2/149 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+AL+ K + +EA + M G P++V+ N++I M
Sbjct: 318 NALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE 377
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
KG PD TY +L + + A + EM G P++ +N + Y G R +
Sbjct: 378 KGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMY--GNRGKF 435
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+ + I + GLSPD V++ T+++ F
Sbjct: 436 TEMMKIFDEINVCGLSPDIVTWNTLLAVF 464
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Query: 31 NFRIRGFAGAGNFESESALIVARCK-EKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLC 89
+ R RGF N + LI A C+ EK++ EA ++ M G E ++V+ A+I G C
Sbjct: 296 DMRKRGFEP--NVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFC 353
Query: 90 XXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVV 149
M +KG+ P + TYM + + + ++ +++ +M RG P ++
Sbjct: 354 KWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLL 413
Query: 150 IYNKLVSAYC-VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
IYN ++ C +GE V++AV + M GLSP ++ +I+GF
Sbjct: 414 IYNVVIRLACKLGE---VKEAVRLWNEMEANGLSPGVDTFVIMINGF 457
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
L+ A CK V+EA +++ M +K PNL +++ G C M G
Sbjct: 208 LLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAG 266
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEK 168
L PD + +L + AY ++++M RG P+V Y L+ A C E+ R+++
Sbjct: 267 LEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEK-RMDE 325
Query: 169 AVGILRVMAKRGLSPDAVSYTTVISGFC 196
A+ + M + G D V+YT +ISGFC
Sbjct: 326 AMRVFVEMERYGCEADIVTYTALISGFC 353
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 94/227 (41%), Gaps = 43/227 (18%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N ++L+ C+E K+ EA + M + G+EP++V ++ G
Sbjct: 235 NLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLM 294
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDR------------------CEA-------------- 129
M ++G P+ N Y L Q LC CEA
Sbjct: 295 NDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCK 354
Query: 130 ----DKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDA 185
DK Y VL +M +G+ PS V Y +++ A+ ++E+ E+ + ++ M +RG PD
Sbjct: 355 WGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAH--EKKEQFEECLELIEKMKRRGCHPDL 412
Query: 186 VSYTTVISGFCYLDEPELQ---WRSLQGTGR--GLGPPIVLKFFFTS 227
+ Y VI C L E + W ++ G G+ +++ FTS
Sbjct: 413 LIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTS 459
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 2/172 (1%)
Query: 41 GNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXX 100
GN + LI A C V +A ++ M + G P+ A+I GLC
Sbjct: 474 GNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRV 533
Query: 101 XXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCV 160
+ G + D Y L L CD+ +K Y++L++M G P + YN L+S +
Sbjct: 534 VEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFF-- 591
Query: 161 GERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTG 212
G+ + E ++ M + GL P +Y VI +C + E + + + G
Sbjct: 592 GKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 18/172 (10%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
P+ YN I G+ AG E+ +V+R KE +++ PN+V+ N +
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKE-VVSRMKEDEIK---------------PNVVTVNTI 447
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
+ G+C M ++G+ + TYM+L C +KA +M+ G
Sbjct: 448 VGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGC 507
Query: 145 SPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
SP IY L+S C R+ A+ ++ + + G S D ++Y +I FC
Sbjct: 508 SPDAKIYYALISGLCQVRRDH--DAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 2/147 (1%)
Query: 54 CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDE 113
C K+ +A + K M ++G+ PNL + N +++G M ++ D
Sbjct: 206 CLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDV 265
Query: 114 NTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGIL 173
TY ++ E +A V EMI G+ PSV YN ++ C +++ VE AV +
Sbjct: 266 VTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLC--KKDNVENAVVMF 323
Query: 174 RVMAKRGLSPDAVSYTTVISGFCYLDE 200
M +RG P+ +Y +I G + E
Sbjct: 324 EEMVRRGYEPNVTTYNVLIRGLFHAGE 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 22/203 (10%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEK------------- 57
L+ +++ G++P ++ YN ++GF AG + K
Sbjct: 215 LEVLKEMVERGINP-NLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVH 273
Query: 58 ------KVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTP 111
+++ A ++ M +GV P++ + NA+IQ LC M R+G P
Sbjct: 274 GFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEP 333
Query: 112 DENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVG 171
+ TY L + L E + +++ M G P+ YN ++ Y E VEKA+G
Sbjct: 334 NVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYY--SECSEVEKALG 391
Query: 172 ILRVMAKRGLSPDAVSYTTVISG 194
+ M P+ +Y +ISG
Sbjct: 392 LFEKMGSGDCLPNLDTYNILISG 414
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 24/174 (13%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKG 73
F ++ R G+ P SV YN A+I CK+ V A +++ M +G
Sbjct: 288 FDEMIREGVLP-SVATYN----------------AMIQVLCKKDNVENAVVMFEEMVRRG 330
Query: 74 VEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAY 133
EPN+ + N +I+GL M +G P+ TY + + + E +KA
Sbjct: 331 YEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKAL 390
Query: 134 KVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVG-------ILRVMAKRG 180
+ +M P++ YN L+S V +R G ILR+ +K G
Sbjct: 391 GLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAFAKEILRLQSKSG 444
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 104 MNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGER 163
M+ G D ++ ++ +LC +KAY++ + R S V YN +++ +C+ +R
Sbjct: 152 MHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKR 210
Query: 164 ERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQW 205
KA+ +L+ M +RG++P+ +Y T++ GF + W
Sbjct: 211 --TPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAW 250
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 87/221 (39%), Gaps = 54/221 (24%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMT 70
L +R++ NG+ P ++ YNF + G A +S A +++ M
Sbjct: 207 LWVWRKMKENGIEP-TLYTYNFLMNGLVSAMFVDS----------------AERVFEVME 249
Query: 71 DKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQL-------- 122
++P++V+ N +I+G C M +G D+ TYM++ Q
Sbjct: 250 SGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFG 309
Query: 123 ---------------------------LCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLV 155
LC + ++ Y V MI +G P+V IY L+
Sbjct: 310 SCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLI 369
Query: 156 SAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
Y + VE A+ +L M G PD V+Y+ V++G C
Sbjct: 370 DGY--AKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 408
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 20/182 (10%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKG 73
F + R G S P+V IY I G+A +G+ E +A L M D+G
Sbjct: 350 FENMIRKG-SKPNVAIYTVLIDGYAKSGSVE----------------DAIRLLHRMIDEG 392
Query: 74 VEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAY 133
+P++V+ + V+ GLC GL + Y SL L D+A
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAE 452
Query: 134 KVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVM-AKRGLSPDAVSYTTVI 192
++ EM +G + YN L+ A+ + +V++A+ + + M + G +YT ++
Sbjct: 453 RLFEEMSEKGCTRDSYCYNALIDAFT--KHRKVDEAIALFKRMEEEEGCDQTVYTYTILL 510
Query: 193 SG 194
SG
Sbjct: 511 SG 512
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 63/147 (42%), Gaps = 2/147 (1%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
LI CKE K A G + KG+ PN +S +IQ C M +G
Sbjct: 351 LINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERG 410
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEK 168
PD TY L L D A + ++I RG+SP IYN L+S C + R
Sbjct: 411 CKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC--KTGRFLP 468
Query: 169 AVGILRVMAKRGLSPDAVSYTTVISGF 195
A + M R + PDA Y T+I GF
Sbjct: 469 AKLLFSEMLDRNILPDAYVYATLIDGF 495
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 23/192 (11%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTD------------- 71
P++ + I GF G+F + L+ + KE+ +R + + D
Sbjct: 273 PTLETFGTMINGFCKEGDFVASDRLL-SEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAE 331
Query: 72 -------KGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLC 124
+P++ + N +I LC ++KGL P+ +Y L Q C
Sbjct: 332 SIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYC 391
Query: 125 DRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPD 184
E D A K+L +M RG P +V Y L+ V ++ AV + + RG+SPD
Sbjct: 392 KSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVS--GHMDDAVNMKVKLIDRGVSPD 449
Query: 185 AVSYTTVISGFC 196
A Y ++SG C
Sbjct: 450 AAIYNMLMSGLC 461
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 20/169 (11%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
P +Y I GF +G+F+ + R+ F L +KGV+ ++V NA+
Sbjct: 483 PDAYVYATLIDGFIRSGDFD-------------EARKVFSL---SVEKGVKVDVVHHNAM 526
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
I+G C MN + L PD+ TY ++ + + A K+ M
Sbjct: 527 IKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKC 586
Query: 145 SPSVVIYNKLVSAYCV-GERERVEKAVGILRVMAKRGLSPDAVSYTTVI 192
P+VV Y L++ +C G+ + E+ + M R L P+ V+YTT+I
Sbjct: 587 KPNVVTYTSLINGFCCQGDFKMAEET---FKEMQLRDLVPNVVTYTTLI 632
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 71/171 (41%), Gaps = 18/171 (10%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
P + Y I G +G+ + +A + + D+GV P+ N +
Sbjct: 413 PDIVTYGILIHGLVVSGHMD----------------DAVNMKVKLIDRGVSPDAAIYNML 456
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
+ GLC M + + PD Y +L + D+A KV S + +G+
Sbjct: 457 MSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGV 516
Query: 145 SPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
VV +N ++ +C +++A+ + M + L PD +Y+T+I G+
Sbjct: 517 KVDVVHHNAMIKGFC--RSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGY 565
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 80/212 (37%), Gaps = 38/212 (17%)
Query: 45 SESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXM 104
S L+ C E KV L + KG PN+V N +I G C +
Sbjct: 207 STCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKEL 266
Query: 105 NRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL-------------------- 144
KG P T+ ++ C + + ++LSE+ RGL
Sbjct: 267 KLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYK 326
Query: 145 ---------------SPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYT 189
P V YN L++ C + + E AVG L +K+GL P+ +SY
Sbjct: 327 VDPAESIGWIIANDCKPDVATYNILINRLC--KEGKKEVAVGFLDEASKKGLIPNNLSYA 384
Query: 190 TVISGFCYLDEPELQWR-SLQGTGRGLGPPIV 220
+I +C E ++ + LQ RG P IV
Sbjct: 385 PLIQAYCKSKEYDIASKLLLQMAERGCKPDIV 416
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 83/227 (36%), Gaps = 49/227 (21%)
Query: 10 TLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFE-------------------SESALI 50
+K FR + +N P+V Y I GF G+F+ + + LI
Sbjct: 574 AIKIFRYMEKNK-CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLI 632
Query: 51 VARCKEKKVRE-AFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGL 109
+ KE E A W+ M PN V+ N ++QG
Sbjct: 633 RSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLA----------- 681
Query: 110 TPDENTY--MSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVE 167
PD + + SLF R ++D G S YN + CV V+
Sbjct: 682 EPDGSNHGQSSLFSEFFHRMKSD------------GWSDHAAAYNSALVCLCV--HGMVK 727
Query: 168 KAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTGRG 214
A M K+G SPD VS+ ++ GFC + + QWR++ G
Sbjct: 728 TACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSK-QWRNMDFCNLG 773
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 4/156 (2%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + ++ C+E K+ EA + M + GV PNL N++I+G
Sbjct: 530 NVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVV 589
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-V 160
M G+ PD T+ +L + + ++ ++M+ G+ P + ++ L Y
Sbjct: 590 DLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARA 649
Query: 161 GERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
GE E+ E+ IL M K G+ P+ V YT +ISG+C
Sbjct: 650 GEPEKAEQ---ILNQMRKFGVRPNVVIYTQIISGWC 682
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 105/269 (39%), Gaps = 62/269 (23%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESES--------------------ALI 50
+K F ++ +G P + + +N I+G+ G E S L+
Sbjct: 409 MKIFEKMKESGCKP-TASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILV 467
Query: 51 VARCKEKKVREAFGLWKAMTDKGVEPNLVSSNA--------------------------- 83
A C ++K+ EA+ + M GV+P++V+ N
Sbjct: 468 QAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKV 527
Query: 84 ---------VIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYK 134
++ G C M G+ P+ + SL + + + D +
Sbjct: 528 KPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGE 587
Query: 135 VLSEMIVRGLSPSVVIYNKLVSAY-CVGERERVEKAVGILRVMAKRGLSPDAVSYTTVIS 193
V+ M G+ P VV ++ L++A+ VG+ +R E+ I M + G+ PD +++ +
Sbjct: 588 VVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEE---IYTDMLEGGIDPDIHAFSILAK 644
Query: 194 GFCYLDEPELQWRSLQGTGR-GLGPPIVL 221
G+ EPE + L + G+ P +V+
Sbjct: 645 GYARAGEPEKAEQILNQMRKFGVRPNVVI 673
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 84/188 (44%), Gaps = 21/188 (11%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMT 70
L ++ +NG+ P ++ ++N I + +GN + +A +++ M
Sbjct: 374 LSLISKVEKNGLKPDTI-LFNAIINASSESGNLD----------------QAMKIFEKMK 416
Query: 71 DKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR-KGLTPDENTYMSLFQLLCDRCEA 129
+ G +P + N +I+G M R + L P++ T L Q C++ +
Sbjct: 417 ESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKI 476
Query: 130 DKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERERVEKAVGILRVMAKRGLSPDAVSY 188
++A+ ++ +M G+ P VV +N L AY +G E I+ M + P+ +
Sbjct: 477 EEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDM--IIPRMLHNKVKPNVRTC 534
Query: 189 TTVISGFC 196
T+++G+C
Sbjct: 535 GTIVNGYC 542
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/187 (18%), Positives = 82/187 (43%), Gaps = 4/187 (2%)
Query: 36 GFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXX 95
G G+ S + L+ + + +EA ++ + ++G +P+L++ ++ L
Sbjct: 312 GGTTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFH 371
Query: 96 XXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLV 155
+ + GL PD + ++ + D+A K+ +M G P+ +N L+
Sbjct: 372 SLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLI 431
Query: 156 SAYCVGERERVEKAVGILRVMAK-RGLSPDAVSYTTVISGFCYLDEPELQWRSL-QGTGR 213
Y G+ ++E++ +L +M + L P+ + ++ +C + E W + +
Sbjct: 432 KGY--GKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSY 489
Query: 214 GLGPPIV 220
G+ P +V
Sbjct: 490 GVKPDVV 496
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 90/214 (42%), Gaps = 27/214 (12%)
Query: 5 LSSTATLKTFRQIFRNGMSPPSVNI------YNFRIRGFAGAGNFESE------------ 46
L+ + K F +I + +S P + + N I+G +GN E+
Sbjct: 174 LNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKS 233
Query: 47 -------SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXX 99
S LI C + K EAF L + M + +EP+ ++ N +I GL
Sbjct: 234 RPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGID 293
Query: 100 XXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC 159
M KG P+ TY + L D+ +A +++S+MI G+ PS + Y K+V C
Sbjct: 294 LLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLC 353
Query: 160 VGERERVEKAVGILRVMAKRGLSPDAVSYTTVIS 193
E + V + +LR M G P + + V+
Sbjct: 354 --ETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ 385
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 24/175 (13%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFG---LWKAMTDKGVEPNLVSS 81
PS Y+ +RG+A ++R+A G ++ M ++ +L++
Sbjct: 206 PSAKTYSILVRGWA-------------------RIRDASGARKVFDEMLERNCVVDLLAY 246
Query: 82 NAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIV 141
NA++ LC M GL PD ++ CD + AYKVL M
Sbjct: 247 NALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKR 306
Query: 142 RGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
L P+V +N ++ C + E+V+ A +L M ++G +PD +Y ++++ C
Sbjct: 307 YDLVPNVYTFNHIIKTLC--KNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHC 359
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 5/160 (3%)
Query: 33 RIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXX 92
R++ + N + + +I CK +KV +A+ L M KG P+ + N+++ C
Sbjct: 303 RMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHC 362
Query: 93 XXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYN 152
M+R PD +TY + +LL D+A ++ M R P+V Y
Sbjct: 363 EVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYT 422
Query: 153 KLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVI 192
++ V ++ ++E+A +M G+ P Y+T +
Sbjct: 423 VMIHG-LVRKKGKLEEACRYFEMMIDEGIPP----YSTTV 457
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 2/163 (1%)
Query: 61 EAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLF 120
EA + M + G++P + + ++ LC G+ P TY L
Sbjct: 156 EACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILV 215
Query: 121 QLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRG 180
+ +A A KV EM+ R ++ YN L+ A C + V+ + + M G
Sbjct: 216 RGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALC--KSGDVDGGYKMFQEMGNLG 273
Query: 181 LSPDAVSYTTVISGFCYLDEPELQWRSLQGTGRGLGPPIVLKF 223
L PDA S+ I +C + ++ L R P V F
Sbjct: 274 LKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTF 316
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 84/198 (42%), Gaps = 20/198 (10%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
P YN I G + +G F+ +A L+ M K V+P V+ +
Sbjct: 150 PDACTYNILIHGCSQSGCFD----------------DALKLFDEMVKKKVKPTGVTFGTL 193
Query: 85 IQGLCXXXXXXXXXXXXXXMNR-KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRG 143
I GLC M + G+ P + Y SL + LC E A+K+ E
Sbjct: 194 IHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGK 253
Query: 144 LSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPEL 203
+ IY+ L+S+ R + IL M+++G PD V+Y +I+GFC ++ E
Sbjct: 254 IKVDAAIYSTLISSLIKAGRSN--EVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSES 311
Query: 204 QWRSL-QGTGRGLGPPIV 220
R L + +GL P ++
Sbjct: 312 ANRVLDEMVEKGLKPDVI 329
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 80/191 (41%), Gaps = 6/191 (3%)
Query: 30 YNFRIRGFAGAGNFESESA----LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVI 85
+ F+++ A G + ++A LI + K + E + + M++KG +P+ V+ N +I
Sbjct: 241 FAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLI 300
Query: 86 QGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLS 145
G C M KGL PD +Y + + + ++A + +M RG S
Sbjct: 301 NGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCS 360
Query: 146 PSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQW 205
P + Y + C G + E+A IL M +G P + C + E+
Sbjct: 361 PDTLSYRIVFDGLCEG--LQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILS 418
Query: 206 RSLQGTGRGLG 216
+ + RG+
Sbjct: 419 KVISSLHRGIA 429
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 4/152 (2%)
Query: 45 SESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXM 104
S +++I KE ++ A ++ M G+ PN+++ +++ GLC M
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 105 NRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAY-CVGER 163
KG+ D Y +L C R + A + SE++ GL+PS IYN L+S + +G
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLG-- 703
Query: 164 ERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+ A+ + + M K GL D +YTT+I G
Sbjct: 704 -NMVAALDLYKKMLKDGLRCDLGTYTTLIDGL 734
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKG 73
F ++ G++P S IYN I GF GN +VA A L+K M G
Sbjct: 677 FSELLEEGLNP-SQPIYNSLISGFRNLGN-------MVA---------ALDLYKKMLKDG 719
Query: 74 VEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAY 133
+ +L + +I GL M GL PDE Y + L + + K
Sbjct: 720 LRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVV 779
Query: 134 KVLSEMIVRGLSPSVVIYNKLVSAYCVGERE-RVEKAVGILRVMAKRGLSPDAVSYTTVI 192
K+ EM ++P+V+IYN +++ + RE +++A + M +G+ PD ++ ++
Sbjct: 780 KMFEEMKKNNVTPNVLIYNAVIAGHY---REGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Query: 193 SG 194
SG
Sbjct: 837 SG 838
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 78/185 (42%), Gaps = 32/185 (17%)
Query: 44 ESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXX 103
E+ +++I+A K+ + +A L M G+ N+V++ ++I G C
Sbjct: 305 ETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDK 364
Query: 104 MNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGER 163
M ++G +P+ T+ L + E +KA + +M V GL+PSV + ++ + G++
Sbjct: 365 MEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQK 424
Query: 164 E--------------------------------RVEKAVGILRVMAKRGLSPDAVSYTTV 191
+ ++A +L M RG+ P+ VSY V
Sbjct: 425 HEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNV 484
Query: 192 ISGFC 196
+ G C
Sbjct: 485 MLGHC 489
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 42/181 (23%)
Query: 54 CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDE 113
CK+ K EA L M +G+ PN+VS N V+ G C + KGL P+
Sbjct: 454 CKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNN 513
Query: 114 NTYMSLFQLLCDRC----EADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERER--- 165
TY +L D C + A +V++ M + + V+Y +++ C VG+ +
Sbjct: 514 YTY----SILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARE 569
Query: 166 ------------------------------VEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
++ AV M G+SP+ ++YT++++G
Sbjct: 570 LLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGL 629
Query: 196 C 196
C
Sbjct: 630 C 630
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 3/164 (1%)
Query: 33 RIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXX 92
R+ G+ + L+ A +E+K EA + ++G EP+ + + +Q C
Sbjct: 223 RMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTL 282
Query: 93 XXXXXXXXXXXMNRKGL-TPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIY 151
M K L P + TY S+ + D A ++ EM+ G+S +VV
Sbjct: 283 DLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAA 342
Query: 152 NKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
L++ +C + + A+ + M K G SP++V+++ +I F
Sbjct: 343 TSLITGHC--KNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWF 384
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Query: 79 VSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSE 138
+S N++I G M G++P+ TY SL LC D+A ++ E
Sbjct: 585 MSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDE 644
Query: 139 MIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
M +G+ + Y L+ +C +R +E A + + + GL+P Y ++ISGF
Sbjct: 645 MKNKGVKLDIPAYGALIDGFC--KRSNMESASALFSELLEEGLNPSQPIYNSLISGF 699
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 37/195 (18%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + ++LI CK + A L+ M +G PN V+ + +I+
Sbjct: 338 NVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFY 397
Query: 102 XXMNRKGLTP-------------------------DE-------NTYM--SLFQLLCDRC 127
M GLTP DE N ++ ++ LC +
Sbjct: 398 KKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQG 457
Query: 128 EADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVS 187
+ D+A ++LS+M RG+ P+VV YN ++ +C ++ ++ A + + ++GL P+ +
Sbjct: 458 KTDEATELLSKMESRGIGPNVVSYNNVMLGHC--RQKNMDLARIVFSNILEKGLKPNNYT 515
Query: 188 YTTVISGFCYLDEPE 202
Y+ +I G C+ + E
Sbjct: 516 YSILIDG-CFRNHDE 529
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 6/161 (3%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N S + L+ A C + A+ L+ M ++ V P++ S +IQG C
Sbjct: 189 NTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELL 248
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M KG PD +L LCD+ D+ K L EMI +G SP + N LV +C
Sbjct: 249 DDMLNKGFVPDR----TLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFC-- 302
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPE 202
+VE+A ++ V+ K G + + ++ VI C DE E
Sbjct: 303 SFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESE 343
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 85/207 (41%), Gaps = 24/207 (11%)
Query: 16 QIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVE 75
Q+ G P V+ N + G+A AG K+ +A+ L + M +G E
Sbjct: 277 QMNEAGFEPDIVDYTNL-LSGYANAG----------------KMADAYDLLRDMRRRGFE 319
Query: 76 PNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKV 135
PN +IQ LC M R D TY +L C + DK Y V
Sbjct: 320 PNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIV 379
Query: 136 LSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
L +MI +GL PS + Y ++ A+ ++E E+ + ++ M + PD Y VI
Sbjct: 380 LDDMIKKGLMPSELTYMHIMVAH--EKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLA 437
Query: 196 CYLDEPELQ---WRSLQGTGRGLGPPI 219
C L E + W ++ GL P +
Sbjct: 438 CKLGEVKEAVRLWNEMEEN--GLSPGV 462
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 2/151 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N ++L+ C+ K+ EA + M + G EP++V ++ G
Sbjct: 251 NLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLL 310
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M R+G P+ N Y L Q LC ++A KV EM VV Y LVS +C
Sbjct: 311 RDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFC-- 368
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVI 192
+ +++K +L M K+GL P ++Y ++
Sbjct: 369 KWGKIDKCYIVLDDMIKKGLMPSELTYMHIM 399
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Query: 31 NFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCX 90
+ R RGF N + LI A CK ++ EA ++ M E ++V+ A++ G C
Sbjct: 312 DMRRRGFEPNAN--CYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCK 369
Query: 91 XXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVI 150
M +KGL P E TYM + + ++ +++ +M P + I
Sbjct: 370 WGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGI 429
Query: 151 YNKLVSAYC-VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
YN ++ C +GE V++AV + M + GLSP ++ +I+G
Sbjct: 430 YNVVIRLACKLGE---VKEAVRLWNEMEENGLSPGVDTFVIMINGL 472
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 9/182 (4%)
Query: 28 NIYNFRIRGFAGAGNFE------SESALIVARCKEKKVREAFGLWKAMTDK-GVEPNLVS 80
N+ + +R F FE S +AL+ A K +EA ++ M G+EP+L +
Sbjct: 130 NMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLET 189
Query: 81 SNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMI 140
N +I+ C M RKG+ P+ +++ + ++D+ KVL+ M
Sbjct: 190 YNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMK 249
Query: 141 VRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDE 200
RG++ V YN + + C +R++ ++A +L M G+ P+ V+Y+ +I GFC D+
Sbjct: 250 DRGVNIGVSTYNIRIQSLC--KRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDD 307
Query: 201 PE 202
E
Sbjct: 308 FE 309
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 2/155 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
+ E+ + +I C+ ++ + M KG++PN S +I G
Sbjct: 186 DLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVL 245
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M +G+ +TY Q LC R ++ +A +L M+ G+ P+ V Y+ L+ +C
Sbjct: 246 AMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFC-- 303
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+ E+A + ++M RG PD+ Y T+I C
Sbjct: 304 NEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLC 338
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 18/147 (12%)
Query: 27 VNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQ 86
V+ YN RI+ CK KK +EA L M G++PN V+ + +I
Sbjct: 257 VSTYNIRIQSL----------------CKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIH 300
Query: 87 GLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSP 146
G C M +G PD Y +L LC + + A + E + + P
Sbjct: 301 GFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVP 360
Query: 147 SVVIYNKLVSAYCVGERERVEKAVGIL 173
S I LV+ + + +VE+A ++
Sbjct: 361 SFSIMKSLVNG--LAKDSKVEEAKELI 385
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 87/207 (42%), Gaps = 25/207 (12%)
Query: 5 LSSTATLKTFRQIFRNGMS---PPSVNIYNFRIRGFAGAG-------------------N 42
LS + L +Q+F + P+ IYN I GF AG +
Sbjct: 901 LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPD 960
Query: 43 FESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXX 102
++ S L+ C +V E +K + + G+ P++V N +I GL
Sbjct: 961 LKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFN 1020
Query: 103 XM-NRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M +G+TPD TY SL L ++A K+ +E+ GL P+V +N L+ Y +
Sbjct: 1021 EMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLS 1080
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSY 188
+ E A + + M G SP+ +Y
Sbjct: 1081 GKP--EHAYAVYQTMVTGGFSPNTGTY 1105
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
LI K ++ EA L++ M D G PN N +I G M ++G
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEK 168
+ PD TY L LC D+ E+ GL+P VV YN +++ +G+ R+E+
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIING--LGKSHRLEE 1014
Query: 169 AVGILRVM-AKRGLSPDAVSYTTVI 192
A+ + M RG++PD +Y ++I
Sbjct: 1015 ALVLFNEMKTSRGITPDLYTYNSLI 1039
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
Query: 62 AFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQ 121
A ++ M KG+ PN+V+ NA + L + GL PD TY + +
Sbjct: 452 ALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK 511
Query: 122 LLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGL 181
E D+A K+LSEM+ G P V++ N L++ + + +RV++A + M + L
Sbjct: 512 CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT--LYKADRVDEAWKMFMRMKEMKL 569
Query: 182 SPDAVSYTTVISGF 195
P V+Y T+++G
Sbjct: 570 KPTVVTYNTLLAGL 583
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 2/138 (1%)
Query: 58 KVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYM 117
K+ EA+ + K M D+G P++V+ +I LC M PD TY+
Sbjct: 273 KINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYI 332
Query: 118 SLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMA 177
+L D + D + SEM G P VV + LV A C + +A L VM
Sbjct: 333 TLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALC--KAGNFGEAFDTLDVMR 390
Query: 178 KRGLSPDAVSYTTVISGF 195
+G+ P+ +Y T+I G
Sbjct: 391 DQGILPNLHTYNTLICGL 408
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 4/151 (2%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ L+ A CK EAF M D+G+ PNL + N +I GL M
Sbjct: 367 TILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMES 426
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
G+ P TY+ ++ A + +M +G++P++V N S Y + + R
Sbjct: 427 LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACN--ASLYSLAKAGRD 484
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCY 197
+A I + GL PD+V+Y ++ CY
Sbjct: 485 REAKQIFYGLKDIGLVPDSVTYNMMMK--CY 513
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 27/203 (13%)
Query: 15 RQIFRN----GMSPPSVNIYNFRIRGFAGAGNFESE-------------------SALIV 51
+QIF G+ P SV YN ++ ++ G + ++LI
Sbjct: 488 KQIFYGLKDIGLVPDSVT-YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLIN 546
Query: 52 ARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTP 111
K +V EA+ ++ M + ++P +V+ N ++ GL M +KG P
Sbjct: 547 TLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPP 606
Query: 112 DENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVG 171
+ T+ +LF LC E A K+L +M+ G P V YN ++ + + + +V++A+
Sbjct: 607 NTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII--FGLVKNGQVKEAMC 664
Query: 172 ILRVMAKRGLSPDAVSYTTVISG 194
M K+ + PD V+ T++ G
Sbjct: 665 FFHQM-KKLVYPDFVTLCTLLPG 686
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 5/184 (2%)
Query: 33 RIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXX 92
++R F N S + LI K + EA +++ M +G P+L + ++++ GL
Sbjct: 178 KMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRR 237
Query: 93 XXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYN 152
M GL P+ T+ ++L + ++AY++L M G P VV Y
Sbjct: 238 DIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYT 297
Query: 153 KLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC---YLDEPELQWRSLQ 209
L+ A C +++ A + M PD V+Y T++ F LD + W ++
Sbjct: 298 VLIDALCTA--RKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEME 355
Query: 210 GTGR 213
G
Sbjct: 356 KDGH 359
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 86/219 (39%), Gaps = 28/219 (12%)
Query: 25 PSVNIYNFRIRGFAGAGNFE-------------------SESALIVARCKEKKVREAFGL 65
P V YNF + + +G + + + +I K V +A L
Sbjct: 818 PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL 877
Query: 66 W-KAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLC 124
+ M+D+ P + +I GL M G P+ Y L
Sbjct: 878 YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFG 937
Query: 125 DRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERERVEKAVGILRVMAKRGLSP 183
EAD A + M+ G+ P + Y+ LV C VG RV++ + + + + GL+P
Sbjct: 938 KAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVG---RVDEGLHYFKELKESGLNP 994
Query: 184 DAVSYTTVISGF---CYLDEPELQWRSLQGTGRGLGPPI 219
D V Y +I+G L+E + + ++ T RG+ P +
Sbjct: 995 DVVCYNLIINGLGKSHRLEEALVLFNEMK-TSRGITPDL 1032
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 57/138 (41%), Gaps = 2/138 (1%)
Query: 59 VREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMS 118
+++A + M + G N S N +I L M +G P TY S
Sbjct: 169 LKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSS 228
Query: 119 LFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAK 178
L L R + D +L EM GL P+V Y + +G ++ +A IL+ M
Sbjct: 229 LMVGLGKRRDIDSVMGLLKEMETLGLKPNV--YTFTICIRVLGRAGKINEAYEILKRMDD 286
Query: 179 RGLSPDAVSYTTVISGFC 196
G PD V+YT +I C
Sbjct: 287 EGCGPDVVTYTVLIDALC 304
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 22/203 (10%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFE-------------------SESALIV 51
LK+F + R+ +SP V + I G+ AG+ E + +ALI
Sbjct: 183 LKSFHSMKRDALSPNVVT-FTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALID 241
Query: 52 ARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTP 111
CK+ +++ A ++ M + VEPN + +I G M +G+
Sbjct: 242 GFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRL 301
Query: 112 DENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVG 171
D Y + LC + +A +++ +M L P +VI+ +++AY + R++ AV
Sbjct: 302 DITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAY--FKSGRMKAAVN 359
Query: 172 ILRVMAKRGLSPDAVSYTTVISG 194
+ + +RG PD V+ +T+I G
Sbjct: 360 MYHKLIERGFEPDVVALSTMIDG 382
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 2/155 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + S I CK +++ A + +M + PN+V+ +I G C
Sbjct: 162 NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLY 221
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M R ++ + TY +L C + E +A ++ S M+ + P+ ++Y ++ +
Sbjct: 222 KEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGF--F 279
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+R + A+ L M +G+ D +Y +ISG C
Sbjct: 280 QRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLC 314
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 5/162 (3%)
Query: 35 RGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXX 94
GF + S ++L K K + E F ++ + K PN+V+ + I C
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFCKSGEL 179
Query: 95 XXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKL 154
M R L+P+ T+ L C + + A + EM +S +VV Y L
Sbjct: 180 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 239
Query: 155 VSAYC-VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+ +C GE +R E+ + M + + P+++ YTT+I GF
Sbjct: 240 IDGFCKKGEMQRAEE---MYSRMVEDRVEPNSLVYTTIIDGF 278
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 54 CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG---LT 110
CK +V+ A + +M G EP+++S N++I G C +
Sbjct: 67 CKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICK 126
Query: 111 PDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAV 170
PD ++ SLF D+ + + M+ + SP+VV Y+ + +C + ++ A+
Sbjct: 127 PDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFC--KSGELQLAL 183
Query: 171 GILRVMAKRGLSPDAVSYTTVISGFC 196
M + LSP+ V++T +I G+C
Sbjct: 184 KSFHSMKRDALSPNVVTFTCLIDGYC 209
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 19/188 (10%)
Query: 9 ATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESE--------------SALIVARC 54
A + + ++ G P V + I G A G + LI A C
Sbjct: 356 AAVNMYHKLIERGFEPDVVALSTM-IDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALC 414
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
KE E L+ +++ G+ P+ + I GLC M ++GL D
Sbjct: 415 KEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLL 474
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERE-RVEKAVGIL 173
Y +L L + +A +V EM+ G+SP +++ L+ AY E+E + A +L
Sbjct: 475 AYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAY---EKEGNMAAASDLL 531
Query: 174 RVMAKRGL 181
M +RGL
Sbjct: 532 LDMQRRGL 539
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 75/194 (38%), Gaps = 22/194 (11%)
Query: 23 SPPSVNIYNFRIRGFAGAGNFE--------------------SESALIVARCKEKKVREA 62
SPP YNF ++ + S + LI C K +REA
Sbjct: 190 SPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREA 249
Query: 63 FGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQL 122
L + + G +P+ N +++G C M +G+ PD+ TY +L
Sbjct: 250 MYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFG 309
Query: 123 LCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLS 182
L ++A L M+ G P Y L++ C + A+ +L M RG +
Sbjct: 310 LSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC--RKGESLGALSLLEEMEARGCA 367
Query: 183 PDAVSYTTVISGFC 196
P+ +Y T++ G C
Sbjct: 368 PNDCTYNTLLHGLC 381
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 3/147 (2%)
Query: 53 RCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPD 112
R + + + M + G+EP+ V+++ ++ LC + K PD
Sbjct: 134 RAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPD 193
Query: 113 ENTYMSLFQLLCDRCEADKAYKVLSEMIVR-GLSPSVVIYNKLVSAYCVGERERVEKAVG 171
TY L + LC + Y+ + EM + P +V + L+ C + R +A+
Sbjct: 194 TYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLR--EAMY 251
Query: 172 ILRVMAKRGLSPDAVSYTTVISGFCYL 198
++ + G PD Y T++ GFC L
Sbjct: 252 LVSKLGNAGFKPDCFLYNTIMKGFCTL 278
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 34/213 (15%)
Query: 10 TLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFE-------------------SESALI 50
LK + G+SP + YN I+ G G E + + LI
Sbjct: 357 ALKLLSSMPSKGISPDTY-CYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILI 415
Query: 51 VARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLT 110
+ C+ VREA ++ + G P++ + NA+I GLC M +
Sbjct: 416 CSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME---VG 472
Query: 111 PDENTYMSL-------FQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGE 162
+ ++ L F + + KAY+ L+ G SP +V YN L++ +C G+
Sbjct: 473 RPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGD 532
Query: 163 RERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
++ A+ +L V+ +GLSPD+V+Y T+I+G
Sbjct: 533 ---IDGALKLLNVLQLKGLSPDSVTYNTLINGL 562
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 62 AFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQ 121
AF ++ M PNL + ++ GL M +G++P+ TY L
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 122 LLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGL 181
LC R AD A K+ EM G P V +N L+ +C + R+ +A +LR+ K G
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFC--KLGRMVEAFELLRLFEKDGF 299
Query: 182 SPDAVSYTTVISGF 195
Y+++I G
Sbjct: 300 VLGLRGYSSLIDGL 313
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 64/150 (42%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ LI C+ +A L+ M G P+ V+ NA++ G C +
Sbjct: 237 TILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEK 296
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
G Y SL L +A+++ + M+ + + P +++Y L+ + + ++
Sbjct: 297 DGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQG--LSKAGKI 354
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
E A+ +L M +G+SPD Y VI C
Sbjct: 355 EDALKLLSSMPSKGISPDTYCYNAVIKALC 384
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 87/215 (40%), Gaps = 22/215 (10%)
Query: 1 MSMRLSSTATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGN----------FESE---- 46
+ R S+ K F ++ +G P SV +N + GF G FE +
Sbjct: 243 LCQRGSADDARKLFYEMQTSGNYPDSV-AHNALLDGFCKLGRMVEAFELLRLFEKDGFVL 301
Query: 47 -----SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
S+LI + ++ +AF L+ M K ++P+++ +IQGL
Sbjct: 302 GLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLL 361
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M KG++PD Y ++ + LC R ++ + EM P + L+ + C
Sbjct: 362 SSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMC-- 419
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
V +A I + K G SP ++ +I G C
Sbjct: 420 RNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLC 454
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX--XXM 104
SALI A + EA ++ +M + G+ PNLV+ NAVI C M
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEM 330
Query: 105 NRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERE 164
R G+ PD T+ SL + + A + EM R + V YN L+ A C G
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG--G 388
Query: 165 RVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+++ A IL M + + P+ VSY+TVI GF
Sbjct: 389 QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFA 420
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 21/190 (11%)
Query: 25 PSVNIYNFRIRGFAGAGNFE-------------------SESALIVARCKEKKVREAFGL 65
P+V Y+ I GFA AG F+ S + L+ K + EA +
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI 466
Query: 66 WKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCD 125
+ M G++ ++V+ NA++ G M R+ + P+ TY +L
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSK 526
Query: 126 RCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDA 185
+A ++ E GL VV+Y+ L+ A C + V AV ++ M K G+SP+
Sbjct: 527 GGLYKEAMEIFREFKSAGLRADVVLYSALIDALC--KNGLVGSAVSLIDEMTKEGISPNV 584
Query: 186 VSYTTVISGF 195
V+Y ++I F
Sbjct: 585 VTYNSIIDAF 594
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 2/151 (1%)
Query: 45 SESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXM 104
S + L+ A CK ++ AF + M K + PN+VS + VI G M
Sbjct: 376 SYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM 435
Query: 105 NRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERE 164
G+ D +Y +L + +++A +L EM G+ VV YN L+ Y G++
Sbjct: 436 RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGY--GKQG 493
Query: 165 RVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+ ++ + M + + P+ ++Y+T+I G+
Sbjct: 494 KYDEVKKVFTEMKREHVLPNLLTYSTLIDGY 524
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 23/186 (12%)
Query: 12 KTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAF-GLWKAMT 70
K F ++ RNG+ P + F S ++A C + EA L+ MT
Sbjct: 325 KFFDEMQRNGVQPDRIT--------------FNS----LLAVCSRGGLWEAARNLFDEMT 366
Query: 71 DKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEAD 130
++ +E ++ S N ++ +C M K + P+ +Y ++ D
Sbjct: 367 NRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFD 426
Query: 131 KAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERERVEKAVGILRVMAKRGLSPDAVSYT 189
+A + EM G++ V YN L+S Y VG R E+A+ ILR MA G+ D V+Y
Sbjct: 427 EALNLFGEMRYLGIALDRVSYNTLLSIYTKVG---RSEEALDILREMASVGIKKDVVTYN 483
Query: 190 TVISGF 195
++ G+
Sbjct: 484 ALLGGY 489
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 5/165 (3%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
L+ C+ + +A + +G ++V+S A I GL + G
Sbjct: 550 LVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANG 609
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEK 168
PD Y L + LC C +A + +EM+ +GL P+V YN ++ +C + +++
Sbjct: 610 HCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWC--KEGEIDR 667
Query: 169 AVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPE---LQWRSLQG 210
+ + M + +PD ++YT++I G C P +W ++G
Sbjct: 668 GLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKG 712
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 63/156 (40%), Gaps = 2/156 (1%)
Query: 41 GNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXX 100
G+ + +A I K + V L++ + G P++++ + +I+ LC
Sbjct: 577 GHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADIL 636
Query: 101 XXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCV 160
M KGL P TY S+ C E D+ + M +P V+ Y L+ C
Sbjct: 637 FNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCA 696
Query: 161 GERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
R +A+ M + P+ +++ +I G C
Sbjct: 697 SGRP--SEAIFRWNEMKGKDCYPNRITFMALIQGLC 730
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 79/202 (39%), Gaps = 22/202 (10%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAG-NFESE------------------SALIV 51
L+ FR I NG P V Y+ I+ A E++ +++I
Sbjct: 599 LELFRDICANGHCP-DVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMID 657
Query: 52 ARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTP 111
CKE ++ M + P++++ ++I GLC M K P
Sbjct: 658 GWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYP 717
Query: 112 DENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVG 171
+ T+M+L Q LC + +A EM + + P +Y LVS+ E + G
Sbjct: 718 NRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSS--FLSSENINAGFG 775
Query: 172 ILRVMAKRGLSPDAVSYTTVIS 193
I R M +G P +V +++
Sbjct: 776 IFREMVHKGRFPVSVDRNYMLA 797
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 72/177 (40%), Gaps = 34/177 (19%)
Query: 54 CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDE 113
CK+ KV A K M KG+EPN+V N ++ C M KGL P+
Sbjct: 460 CKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNN 519
Query: 114 NTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERER------- 165
TY L + A+ V+++M + VIYN +++ C VG+ +
Sbjct: 520 FTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQN 579
Query: 166 --------------------------VEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+ AV R M++ G SP+ V++T++I+GFC
Sbjct: 580 LIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFC 636
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 18/166 (10%)
Query: 30 YNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLC 89
YN I GF G+ +S A ++ M++ G PN+V+ ++I G C
Sbjct: 593 YNSIIDGFVKVGDTDS----------------AVETYREMSENGKSPNVVTFTSLINGFC 636
Query: 90 XXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVV 149
M L D Y +L C + + AY + SE+ GL P+V
Sbjct: 637 KSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVS 696
Query: 150 IYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+YN L+S + +++ A+ + + M G+S D +YTT+I G
Sbjct: 697 VYNSLISGF--RNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGL 740
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 85/181 (46%), Gaps = 4/181 (2%)
Query: 17 IFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEP 76
+ R+ + + IYN ++ AG+ + L+ A +E+K EA +++ + +G EP
Sbjct: 214 LVRSNLIDEAKEIYN-KMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEP 272
Query: 77 NLVSSNAVIQGLCXXXXXXXXXXXXXXMNRK-GLTPDENTYMSLFQLLCDRCEADKAYKV 135
+ + + +Q C M K G+ + TY S+ ++A +V
Sbjct: 273 DGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRV 332
Query: 136 LSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+ EM+ G+ SV+ LV+ YC G + KA+ + M + GL+PD V ++ ++ F
Sbjct: 333 MDEMVGFGIPMSVIAATSLVNGYCKG--NELGKALDLFNRMEEEGLAPDKVMFSVMVEWF 390
Query: 196 C 196
C
Sbjct: 391 C 391
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
P+V++YN I GF G K+ A L+K M + G+ +L + +
Sbjct: 693 PNVSVYNSLISGFRNLG----------------KMDAAIDLYKKMVNDGISCDLFTYTTM 736
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
I GL + G+ PDE +M L L + + KA K+L EM + +
Sbjct: 737 IDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDV 796
Query: 145 SPSVVIYNKLVSAYCVGERE-RVEKAVGILRVMAKRGLSPDAVSYTTVISG 194
+P+V++Y+ +++ + RE + +A + M ++G+ D + ++SG
Sbjct: 797 TPNVLLYSTVIAGH---HREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 87/235 (37%), Gaps = 55/235 (23%)
Query: 24 PPSVNIYNFRIRGFAGAGNFE-------------------SESALIVARCKEKKVREAFG 64
P S Y I F GN E + ++L+ CK ++ +A
Sbjct: 307 PASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALD 366
Query: 65 LWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPD------------ 112
L+ M ++G+ P+ V + +++ C M + P
Sbjct: 367 LFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCL 426
Query: 113 ------------ENTYMS----------LFQLLCDRCEADKAYKVLSEMIVRGLSPSVVI 150
+++ S +F L C + + D A L M +G+ P+VV
Sbjct: 427 KAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVF 486
Query: 151 YNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQW 205
YN ++ A+C + ++ A I M ++GL P+ +Y+ +I GF + + W
Sbjct: 487 YNNMMLAHC--RMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAW 539
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 7/195 (3%)
Query: 26 SVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVI 85
++ +++ +R F + ++ + LI C K +A L M+ G EP++V+ N +I
Sbjct: 190 AMKLFDEHLR-FQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLI 248
Query: 86 QGLCXXXXXXXXXXXXXXMNRKGL-TPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
QG C + + +PD TY S+ C + +A +L +M+ G+
Sbjct: 249 QGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGI 308
Query: 145 SPSVVIYNKLVSAYC-VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPEL 203
P+ V +N LV Y GE E+ G M G PD V++T++I G+C + +
Sbjct: 309 YPTNVTFNVLVDGYAKAGEMLTAEEIRG---KMISFGCFPDVVTFTSLIDGYCRVGQVSQ 365
Query: 204 QWRSLQG-TGRGLGP 217
+R + RG+ P
Sbjct: 366 GFRLWEEMNARGMFP 380
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 83/202 (41%), Gaps = 21/202 (10%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESAL-------------------IVARC 54
F+ + + P V Y I G+ AG S+L +
Sbjct: 264 FKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYA 323
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
K ++ A + M G P++V+ ++I G C MN +G+ P+
Sbjct: 324 KAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAF 383
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILR 174
TY L LC+ KA ++L ++ + + P +YN ++ +C + +V +A I+
Sbjct: 384 TYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFC--KAGKVNEANVIVE 441
Query: 175 VMAKRGLSPDAVSYTTVISGFC 196
M K+ PD +++T +I G C
Sbjct: 442 EMEKKKCKPDKITFTILIIGHC 463
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 22/197 (11%)
Query: 16 QIFRNGMSPPSVNIYNFRIRGFAGAGNFESE-------------------SALIVARCKE 56
+ R G+ P +V +N + G+A AG + ++LI C+
Sbjct: 302 DMLRLGIYPTNVT-FNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRV 360
Query: 57 KKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTY 116
+V + F LW+ M +G+ PN + + +I LC + K + P Y
Sbjct: 361 GQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMY 420
Query: 117 MSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVM 176
+ C + ++A ++ EM + P + + L+ +C+ + R+ +AV I M
Sbjct: 421 NPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCM--KGRMFEAVSIFHKM 478
Query: 177 AKRGLSPDAVSYTTVIS 193
G SPD ++ ++++S
Sbjct: 479 VAIGCSPDKITVSSLLS 495
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 7/195 (3%)
Query: 26 SVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVI 85
++ +++ +R F + ++ + LI C K +A L M+ G EP++V+ N +I
Sbjct: 190 AMKLFDEHLR-FQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLI 248
Query: 86 QGLCXXXXXXXXXXXXXXMNRKGL-TPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
QG C + + +PD TY S+ C + +A +L +M+ G+
Sbjct: 249 QGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGI 308
Query: 145 SPSVVIYNKLVSAYC-VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPEL 203
P+ V +N LV Y GE E+ G M G PD V++T++I G+C + +
Sbjct: 309 YPTNVTFNVLVDGYAKAGEMLTAEEIRG---KMISFGCFPDVVTFTSLIDGYCRVGQVSQ 365
Query: 204 QWRSLQG-TGRGLGP 217
+R + RG+ P
Sbjct: 366 GFRLWEEMNARGMFP 380
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 83/202 (41%), Gaps = 21/202 (10%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESAL-------------------IVARC 54
F+ + + P V Y I G+ AG S+L +
Sbjct: 264 FKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYA 323
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
K ++ A + M G P++V+ ++I G C MN +G+ P+
Sbjct: 324 KAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAF 383
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILR 174
TY L LC+ KA ++L ++ + + P +YN ++ +C + +V +A I+
Sbjct: 384 TYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFC--KAGKVNEANVIVE 441
Query: 175 VMAKRGLSPDAVSYTTVISGFC 196
M K+ PD +++T +I G C
Sbjct: 442 EMEKKKCKPDKITFTILIIGHC 463
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 22/197 (11%)
Query: 16 QIFRNGMSPPSVNIYNFRIRGFAGAGNFESE-------------------SALIVARCKE 56
+ R G+ P +V +N + G+A AG + ++LI C+
Sbjct: 302 DMLRLGIYPTNVT-FNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRV 360
Query: 57 KKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTY 116
+V + F LW+ M +G+ PN + + +I LC + K + P Y
Sbjct: 361 GQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMY 420
Query: 117 MSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVM 176
+ C + ++A ++ EM + P + + L+ +C+ + R+ +AV I M
Sbjct: 421 NPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCM--KGRMFEAVSIFHKM 478
Query: 177 AKRGLSPDAVSYTTVIS 193
G SPD ++ ++++S
Sbjct: 479 VAIGCSPDKITVSSLLS 495
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 88/184 (47%), Gaps = 6/184 (3%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKG 73
R+ R G++ +V+ +N R+ + + + S +I ++++ EA + ++ D+
Sbjct: 193 IRRYVRAGLASEAVHCFN-RMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR- 250
Query: 74 VEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRC-EADKA 132
EP+++ +++G C M G+ P+ TY + LC RC + +A
Sbjct: 251 FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALC-RCGQISRA 309
Query: 133 YKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVI 192
+ V ++M+ G +P+ + +N L+ + + R EK + + M K G PD ++Y +I
Sbjct: 310 HDVFADMLDSGCAPNAITFNNLMRVHV--KAGRTEKVLQVYNQMKKLGCEPDTITYNFLI 367
Query: 193 SGFC 196
C
Sbjct: 368 EAHC 371
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 82/189 (43%), Gaps = 25/189 (13%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
P V +Y +RG+ AG ++ EA ++K M G+EPN+ + + V
Sbjct: 253 PDVIVYTNLVRGWCRAG----------------EISEAEKVFKEMKLAGIEPNVYTYSIV 296
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
I LC M G P+ T+ +L ++ +K +V ++M G
Sbjct: 297 IDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGC 356
Query: 145 SPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQ 204
P + YN L+ A+C E +E AV +L M K+ +A ++ T+ F Y+++
Sbjct: 357 EPDTITYNFLIEAHC--RDENLENAVKVLNTMIKKKCEVNASTFNTI---FRYIEKK--- 408
Query: 205 WRSLQGTGR 213
R + G R
Sbjct: 409 -RDVNGAHR 416
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 83/191 (43%), Gaps = 23/191 (12%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESE----SALIVARC------------ 54
L+ + Q+ + G P ++ YNF I N E+ + +I +C
Sbjct: 345 LQVYNQMKKLGCEPDTIT-YNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFR 403
Query: 55 ---KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTP 111
K++ V A ++ M + EPN V+ N +++ M+ K + P
Sbjct: 404 YIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEP 463
Query: 112 DENTYMSLFQLLCDRCEADKAYKVLSEMI-VRGLSPSVVIYNKLVSAYCVGERERVEKAV 170
+ NTY L + C + AYK+ EM+ + L+PS+ +Y +++ + +++K
Sbjct: 464 NVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQ--LRRAGQLKKHE 521
Query: 171 GILRVMAKRGL 181
++ M ++GL
Sbjct: 522 ELVEKMIQKGL 532
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 71/175 (40%), Gaps = 20/175 (11%)
Query: 23 SPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSN 82
SPP V YN IR GN E +A WK G P +++
Sbjct: 205 SPPDVITYNTVIRCMFDYGNAE----------------QAIRFWKDQLQNGCPPFMITYT 248
Query: 83 AVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVR 142
+++ +C M +G PD TY SL C R ++ V+ ++
Sbjct: 249 VLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSH 308
Query: 143 GLSPSVVIYNKLVSAYCVGER-ERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
GL + V YN L+ + C E + VE+ IL +M + P ++Y +I+G C
Sbjct: 309 GLELNTVTYNTLLHSLCSHEYWDEVEE---ILNIMYQTSYCPTVITYNILINGLC 360
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 40/199 (20%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
+F S S L+ + ++ +A + + M G P+ ++ N +I LC
Sbjct: 138 HFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLL 197
Query: 102 XXMNRKGLTPD----------------------------EN-------TYMSLFQLLCDR 126
M+ G PD +N TY L +L+C
Sbjct: 198 EDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRY 257
Query: 127 CEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAV 186
C + +A +VL +M V G P +V YN LV+ C R +E+ +++ + GL + V
Sbjct: 258 CGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNC--RRGNLEEVASVIQHILSHGLELNTV 315
Query: 187 SYTTVISGFC---YLDEPE 202
+Y T++ C Y DE E
Sbjct: 316 TYNTLLHSLCSHEYWDEVE 334
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 74/189 (39%), Gaps = 21/189 (11%)
Query: 25 PSVNIYNFRIRGFAGA-------------------GNFESESALIVARCKEKKVREAFGL 65
P+V YN I G A + + + ++ A KE V +A L
Sbjct: 347 PTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIEL 406
Query: 66 WKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCD 125
+ + P L++ N+VI GL M G+ PD+ T SL C
Sbjct: 407 LGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCR 466
Query: 126 RCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDA 185
++A +VL E RG Y ++ C +++ +E A+ ++ +M G PD
Sbjct: 467 ANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLC--KKKEIEMAIEVVEIMLTGGCKPDE 524
Query: 186 VSYTTVISG 194
YT ++ G
Sbjct: 525 TIYTAIVKG 533
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 2/153 (1%)
Query: 44 ESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXX 103
E+ + ++ C K+ +A L + M P+ S + +++GL
Sbjct: 105 ETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRV 164
Query: 104 MNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGER 163
M G PD TY + LC + A +L +M + G P V+ YN ++ C+ +
Sbjct: 165 MVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIR--CMFDY 222
Query: 164 ERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
E+A+ + + G P ++YT ++ C
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVC 255
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 62/149 (41%), Gaps = 2/149 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
++L+ C+ + E + + + G+E N V+ N ++ LC M +
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
P TY L LC +A +M+ + P +V YN ++ A + + V
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGA--MSKEGMV 400
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+ A+ +L ++ P ++Y +VI G
Sbjct: 401 DDAIELLGLLKNTCCPPGLITYNSVIDGL 429
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 8/195 (4%)
Query: 3 MRLSSTATLKTFRQIFRN----GMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKK 58
MR TL T +I R G +V I++ R+ F N ES + L+ CKEK+
Sbjct: 147 MRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFD-RLGEFGLEKNTESMNLLLDTLCKEKR 205
Query: 59 VREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMS 118
V +A + + + PN + N I G C M G P +Y +
Sbjct: 206 VEQARVVLLQLKSH-ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTT 264
Query: 119 LFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAK 178
+ + C + E K Y++LSEM G P+ + Y ++S+ + ++ E+A+ + M +
Sbjct: 265 IIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS--LNAQKEFEEALRVATRMKR 322
Query: 179 RGLSPDAVSYTTVIS 193
G PD++ Y +I
Sbjct: 323 SGCKPDSLFYNCLIH 337
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 19/179 (10%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
P+ + +N I G+ CK +V EA + M G P ++S +
Sbjct: 222 PNAHTFNIFIHGW----------------CKANRVEEALWTIQEMKGHGFRPCVISYTTI 265
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
I+ C M G P+ TY ++ L + E ++A +V + M G
Sbjct: 266 IRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGC 325
Query: 145 SPSVVIYNKLVSAYCVGERERVEKAVGILRV-MAKRGLSPDAVSYTTVISGFCYLDEPE 202
P + YN L+ + + R+E+A + RV M + G+S + +Y ++I+ +C+ DE +
Sbjct: 326 KPDSLFYNCLI--HTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEED 382
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 8/195 (4%)
Query: 3 MRLSSTATLKTFRQIFRN----GMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKK 58
MR TL T +I R G +V I++ R+ F N ES + L+ CKEK+
Sbjct: 147 MRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFD-RLGEFGLEKNTESMNLLLDTLCKEKR 205
Query: 59 VREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMS 118
V +A + + + PN + N I G C M G P +Y +
Sbjct: 206 VEQARVVLLQLKSH-ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTT 264
Query: 119 LFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAK 178
+ + C + E K Y++LSEM G P+ + Y ++S+ + ++ E+A+ + M +
Sbjct: 265 IIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS--LNAQKEFEEALRVATRMKR 322
Query: 179 RGLSPDAVSYTTVIS 193
G PD++ Y +I
Sbjct: 323 SGCKPDSLFYNCLIH 337
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 19/179 (10%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
P+ + +N I G+ CK +V EA + M G P ++S +
Sbjct: 222 PNAHTFNIFIHGW----------------CKANRVEEALWTIQEMKGHGFRPCVISYTTI 265
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
I+ C M G P+ TY ++ L + E ++A +V + M G
Sbjct: 266 IRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGC 325
Query: 145 SPSVVIYNKLVSAYCVGERERVEKAVGILRV-MAKRGLSPDAVSYTTVISGFCYLDEPE 202
P + YN L+ + + R+E+A + RV M + G+S + +Y ++I+ +C+ DE +
Sbjct: 326 KPDSLFYNCLI--HTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEED 382
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 3/149 (2%)
Query: 48 ALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRK 107
LI+ +E+KV +A +W M + P + + N++I GLC +
Sbjct: 491 TLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAES 550
Query: 108 GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVE 167
GL PD++T+ S+ C +KA++ +E I P N L++ C + E
Sbjct: 551 GLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLC--KEGMTE 608
Query: 168 KAVGILRVMAKRGLSPDAVSYTTVISGFC 196
KA+ + + D V+Y T+IS FC
Sbjct: 609 KALNFFNTLIEER-EVDTVTYNTMISAFC 636
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
LI A K + A + + M KG++ N ++ N ++ LC ++
Sbjct: 420 HTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHK 479
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+G DE TY +L + +KA ++ EM ++P+V +N L+ C +
Sbjct: 480 RGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLC--HHGKT 537
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
E A+ +A+ GL PD ++ ++I G+C
Sbjct: 538 ELAMEKFDELAESGLLPDDSTFNSIILGYC 567
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDK-GVEPNLVSSNAVIQGLCXXXXXXXXXXX 100
N ++ + L+ C E K+ +A G+ + M + V P+ V+ N +++ +
Sbjct: 203 NVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKEL 262
Query: 101 XXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCV 160
M + GL P+ TY +L C +A++++ M + P + YN L++ C
Sbjct: 263 LLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCN 322
Query: 161 GERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCY 197
R + + ++ M L PD V+Y T+I G C+
Sbjct: 323 AGSMR--EGLELMDAMKSLKLQPDVVTYNTLIDG-CF 356
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ ++ A CKE+K+ EA L + +G + V+ +I G M +
Sbjct: 455 NTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKK 514
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+TP +T+ SL LC + + A + E+ GL P +N ++ YC + RV
Sbjct: 515 VKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYC--KEGRV 572
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
EKA K PD + +++G C
Sbjct: 573 EKAFEFYNESIKHSFKPDNYTCNILLNGLC 602
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 24/192 (12%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVR--------------------EAFG 64
P + YN I G AG+ L+ A K K++ EA
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDA-MKSLKLQPDVVTYNTLIDGCFELGLSLEARK 366
Query: 65 LWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXM-NRKGLTPDENTYMSLFQLL 123
L + M + GV+ N V+ N ++ LC + + G +PD TY +L +
Sbjct: 367 LMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAY 426
Query: 124 CDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSP 183
+ A +++ EM +G+ + + N ++ A C + ++++A +L KRG
Sbjct: 427 LKVGDLSGALEMMREMGQKGIKMNTITLNTILDALC--KERKLDEAHNLLNSAHKRGFIV 484
Query: 184 DAVSYTTVISGF 195
D V+Y T+I GF
Sbjct: 485 DEVTYGTLIMGF 496
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 3/151 (1%)
Query: 54 CKEKKVREAFGLWKAMTD-KGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPD 112
CKE+K K + D G P++V+ + +I+ M +KG+ +
Sbjct: 391 CKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMN 450
Query: 113 ENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGI 172
T ++ LC + D+A+ +L+ RG V Y L+ + E+VEKA+ +
Sbjct: 451 TITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFF--REEKVEKALEM 508
Query: 173 LRVMAKRGLSPDAVSYTTVISGFCYLDEPEL 203
M K ++P ++ ++I G C+ + EL
Sbjct: 509 WDEMKKVKITPTVSTFNSLIGGLCHHGKTEL 539
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 60 REAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXM-NRKGLTPDENTYMS 118
RE F M GV N+ + N ++ G C M + + PD TY +
Sbjct: 189 REVFD---DMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNT 245
Query: 119 LFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAK 178
+ + + + ++L +M GL P+ V YN LV YC + +++A I+ +M +
Sbjct: 246 ILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYC--KLGSLKEAFQIVELMKQ 303
Query: 179 RGLSPDAVSYTTVISGFC 196
+ PD +Y +I+G C
Sbjct: 304 TNVLPDLCTYNILINGLC 321
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 80/212 (37%), Gaps = 41/212 (19%)
Query: 25 PSVNIYNFRIRGFAGAGNFE---------SESAL----------IVARCKEKKVREAFGL 65
P+V+ +N I G G E +ES L I+ CKE +V +AF
Sbjct: 519 PTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEF 578
Query: 66 WKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCD 125
+ +P+ + N ++ GLC + + D TY ++ C
Sbjct: 579 YNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCK 637
Query: 126 RCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGER-----ERVEKAVGILRVM---- 176
+ +AY +LSEM +GL P YN +S + E ++K G M
Sbjct: 638 DKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDL 697
Query: 177 ------------AKRGLSPDAVSYTTVISGFC 196
+K L+ +A++Y+ VI C
Sbjct: 698 QVETEKNPATSESKEELNTEAIAYSDVIDELC 729
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 72/175 (41%), Gaps = 19/175 (10%)
Query: 23 SPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDK-GVEPNLVSS 81
SPP YNF ++ CK K + + M D V+P+LVS
Sbjct: 190 SPPDTYTYNFLLKHL----------------CKCKDLHVVYEFVDEMRDDFDVKPDLVSF 233
Query: 82 NAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIV 141
+I +C + G PD Y ++ + C + +A V +M
Sbjct: 234 TILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKE 293
Query: 142 RGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
G+ P + YN L+ + + + RVE+A L+ M G PD +YT++++G C
Sbjct: 294 EGVEPDQITYNTLI--FGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 3/147 (2%)
Query: 53 RCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPD 112
R + + + M + G+EP+ V+++ ++ LC + K PD
Sbjct: 134 RAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPD 193
Query: 113 ENTYMSLFQLLCDRCEADKAYKVLSEMIVR-GLSPSVVIYNKLVSAYCVGERERVEKAVG 171
TY L + LC + Y+ + EM + P +V + L+ C + R +A+
Sbjct: 194 TYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLR--EAMY 251
Query: 172 ILRVMAKRGLSPDAVSYTTVISGFCYL 198
++ + G PD Y T++ GFC L
Sbjct: 252 LVSKLGNAGFKPDCFLYNTIMKGFCTL 278
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 21/180 (11%)
Query: 18 FRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPN 77
R G PS+ YN I G +GN E R KE+ MT + + P+
Sbjct: 400 LRAGDIHPSIVTYNTLIDGLCESGNLEG-----AQRLKEE-----------MTTQLIFPD 443
Query: 78 LVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLS 137
+++ +++G M RKG+ PD Y + ++DKA+++
Sbjct: 444 VITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHE 503
Query: 138 EMI-VRGLSPSVVIYNKLVSAYC-VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
EM+ +P + IYN + C VG + KA+ R + + GL PD V+YTTVI G+
Sbjct: 504 EMVATDHHAPDLTIYNVRIDGLCKVGN---LVKAIEFQRKIFRVGLVPDHVTYTTVIRGY 560
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 19/174 (10%)
Query: 15 RQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGV 74
R+IFR G+ P V Y IRG+ G F + A L+ M K +
Sbjct: 539 RKIFRVGLVPDHVT-YTTVIRGYLENGQF----------------KMARNLYDEMLRKRL 581
Query: 75 EPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYK 134
P++++ +I G M ++G+ P+ T+ +L +C D+AY+
Sbjct: 582 YPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYR 641
Query: 135 VLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSY 188
L +M G+ P+ Y L+S C + E+ E+ V + + M + + PD ++
Sbjct: 642 YLCKMEEEGIPPNKYSYTMLISKNC--DFEKWEEVVKLYKEMLDKEIEPDGYTH 693
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 5/138 (3%)
Query: 61 EAFGLWKAM--TDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMS 118
+AF L + M TD P+L N I GLC + R GL PD TY +
Sbjct: 497 KAFRLHEEMVATDHHA-PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTT 555
Query: 119 LFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAK 178
+ + + + A + EM+ + L PSV+ Y L+ Y + R+E+A M K
Sbjct: 556 VIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLI--YGHAKAGRLEQAFQYSTEMKK 613
Query: 179 RGLSPDAVSYTTVISGFC 196
RG+ P+ +++ ++ G C
Sbjct: 614 RGVRPNVMTHNALLYGMC 631
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 72/185 (38%), Gaps = 25/185 (13%)
Query: 30 YNFRIRGFAGAGNFE-------------------SESALIVARCKEKKVREAFGLWKAMT 70
YN I GF+ G E S + LI CK+ +A+G+ M
Sbjct: 276 YNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEML 335
Query: 71 DKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEAD 130
+ G+ P + N I LC M PD +Y +L +
Sbjct: 336 NAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFV 391
Query: 131 KAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTT 190
+A + ++ + PS+V YN L+ C E +E A + M + + PD ++YTT
Sbjct: 392 EASLLFDDLRAGDIHPSIVTYNTLIDGLC--ESGNLEGAQRLKEEMTTQLIFPDVITYTT 449
Query: 191 VISGF 195
++ GF
Sbjct: 450 LVKGF 454
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 6/131 (4%)
Query: 65 LWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLC 124
+W M + +E + V+ N +I G M R G ++ L + C
Sbjct: 260 IWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYC 319
Query: 125 DRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPD 184
+ D A+ V EM+ G+ P+ YN + A C + R++ A +L MA +PD
Sbjct: 320 KQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALC--DFGRIDDARELLSSMA----APD 373
Query: 185 AVSYTTVISGF 195
VSY T++ G+
Sbjct: 374 VVSYNTLMHGY 384
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 6/157 (3%)
Query: 50 IVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGL 109
I A C ++ +A L +M P++VS N ++ G + +
Sbjct: 350 ICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDI 405
Query: 110 TPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKA 169
P TY +L LC+ + A ++ EM + + P V+ Y LV + + + A
Sbjct: 406 HPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFV--KNGNLSMA 463
Query: 170 VGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWR 206
+ M ++G+ PD +YTT G L + + +R
Sbjct: 464 TEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFR 500
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 2/148 (1%)
Query: 48 ALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRK 107
A+I CK + EA G M KG++ N V + ++Q C
Sbjct: 323 AVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDM 382
Query: 108 GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVE 167
+ D Y F L ++A+++L EM RG+ P V+ Y L+ YC+ + +V
Sbjct: 383 NIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCL--QGKVV 440
Query: 168 KAVGILRVMAKRGLSPDAVSYTTVISGF 195
A+ ++ M G+SPD ++Y ++SG
Sbjct: 441 DALDLIDEMIGNGMSPDLITYNVLVSGL 468
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 69/160 (43%), Gaps = 15/160 (9%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
+I A CK VREA L+ M ++G+ P+L + +I C M ++G
Sbjct: 597 MIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRG 656
Query: 109 LTPDENTYMSLFQLLC-------DRCEAD------KAYKVLSEMIVRGLSPSVVIYNKLV 155
+ PD TY L + C KA +VL E G+ VV Y L+
Sbjct: 657 IKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLI 716
Query: 156 SAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
C + +E+A + M GL PD V+YTT+IS +
Sbjct: 717 DRQC--KMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSY 754
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 96/264 (36%), Gaps = 82/264 (31%)
Query: 10 TLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAM 69
L ++ NGMSP + YN + G A G+ E E +++ M
Sbjct: 442 ALDLIDEMIGNGMSPDLIT-YNVLVSGLARNGHEE----------------EVLEIYERM 484
Query: 70 TDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRK---------------GLTPD-- 112
+G +PN V+++ +I+GLC + +K GL+
Sbjct: 485 KAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAY 544
Query: 113 -----------ENTYMSLFQLLCDRCEADKAYKVLSEM---------------------- 139
++ Y+ LF LC +KA+ VL +M
Sbjct: 545 KAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKL 604
Query: 140 -------------IVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAV 186
+ RGL P + Y ++ YC ++KA + M +RG+ PD V
Sbjct: 605 NNVREAQVLFDTMVERGLIPDLFTYTIMIHTYC--RLNELQKAESLFEDMKQRGIKPDVV 662
Query: 187 SYTTVISGFCYLDEPELQWRSLQG 210
+YT ++ + LD + S+QG
Sbjct: 663 TYTVLLDRYLKLDPEHHETCSVQG 686
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 5/166 (3%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S ++ CK EA +K D + + V N L M
Sbjct: 357 SLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKD 416
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+G+ PD Y +L C + + A ++ EMI G+SP ++ YN LVS E
Sbjct: 417 RGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHE-- 474
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCY---LDEPELQWRSLQ 209
E+ + I M G P+AV+ + +I G C+ + E E + SL+
Sbjct: 475 EEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLE 520
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 72/185 (38%), Gaps = 14/185 (7%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
L + C E + +A + K M+ VEP +I C M +G
Sbjct: 562 LFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERG 621
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVE- 167
L PD TY + C E KA + +M RG+ P VV Y L+ Y + E E
Sbjct: 622 LIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHET 681
Query: 168 ----------KAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSL--QGTGRGL 215
KA +LR + G+ D V YT +I C ++ E Q L + GL
Sbjct: 682 CSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLE-QAAELFDRMIDSGL 740
Query: 216 GPPIV 220
P +V
Sbjct: 741 EPDMV 745
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 6/169 (3%)
Query: 35 RGFA-GAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXX 93
RGF+ G + S ++ C++ ++REA L M+ K +EP+ ++ N +I C
Sbjct: 336 RGFSPGVVTYNS---ILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIED 392
Query: 94 XXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNK 153
M GL D +Y +L C E + A + L MI +G SP Y+
Sbjct: 393 MVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSW 452
Query: 154 LVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPE 202
LV + + + ++ +L KRGL D Y +I C L++ +
Sbjct: 453 LVDGFY--NQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVD 499
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 83/195 (42%), Gaps = 21/195 (10%)
Query: 19 RNGMSPPSVNIYNFRIRGFAGAG------------------NFESESALIVARCKEKKVR 60
R+G++P V YN I GF+ G N + + LI C+ +
Sbjct: 266 RSGVAPNIVT-YNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDID 324
Query: 61 EAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLF 120
EA L + M +G P +V+ N++++ LC M+ K + PD T +L
Sbjct: 325 EALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLI 384
Query: 121 QLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRG 180
C + A KV +MI GL + Y L+ +C + +E A L M ++G
Sbjct: 385 NAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFC--KVLELENAKEELFSMIEKG 442
Query: 181 LSPDAVSYTTVISGF 195
SP +Y+ ++ GF
Sbjct: 443 FSPGYATYSWLVDGF 457
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 97/205 (47%), Gaps = 9/205 (4%)
Query: 19 RNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNL 78
+ GM S+ ++ +IR + ++ + L+ + K++ + ++K M GV N+
Sbjct: 145 KAGMINDSIVVFE-QIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANI 203
Query: 79 VSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSE 138
N ++ M KG+ PD TY +L + C + +A V
Sbjct: 204 HVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDR 263
Query: 139 MIVRGLSPSVVIYNKLVSAYCVGERE-RVEKAVGILRVMAKRGLSPDAVSYTTVISGFCY 197
M G++P++V YN + + RE R+ +A + R + K ++ + V+YTT+I G+C
Sbjct: 264 MERSGVAPNIVTYNSFIHGF---SREGRMREATRLFREI-KDDVTANHVTYTTLIDGYCR 319
Query: 198 LDEPE--LQWRSLQGTGRGLGPPIV 220
+++ + L+ R + + RG P +V
Sbjct: 320 MNDIDEALRLREVMES-RGFSPGVV 343
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 2/149 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ LI A CK + + A + K M + G++ ++ S A+I G C M
Sbjct: 381 NTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIE 440
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
KG +P TY L ++ + D+ K+L E RGL V +Y L+ C + E+V
Sbjct: 441 KGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRIC--KLEQV 498
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+ A + M K+GL D+V +TT+ +
Sbjct: 499 DYAKVLFESMEKKGLVGDSVIFTTMAYAY 527
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 92/231 (39%), Gaps = 54/231 (23%)
Query: 4 RLSSTATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAF 63
RL+ T K F+++ + G+ ++++YN + + +G+ E L+
Sbjct: 182 RLTDTV-WKIFKKMVKLGV-VANIHVYNVLVHACSKSGDPEKAEKLL------------- 226
Query: 64 GLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTP------------ 111
M +KGV P++ + N +I C M R G+ P
Sbjct: 227 ---SEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGF 283
Query: 112 ----------------------DENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVV 149
+ TY +L C + D+A ++ M RG SP VV
Sbjct: 284 SREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVV 343
Query: 150 IYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDE 200
YN ++ C E R+ +A +L M+ + + PD ++ T+I+ +C +++
Sbjct: 344 TYNSILRKLC--EDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIED 392
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 19/206 (9%)
Query: 1 MSMRLSSTATLKTFRQIF-----RNGMSPPSVNIYNFRIRGFAGAGNFESE------SAL 49
M + L+ KT Q+ R +S P V +R G + + E S L
Sbjct: 86 MILILTKHKHFKTAHQLLDKLAQRELLSSPLV------LRSLVGGVSEDPEDVSHVFSWL 139
Query: 50 IVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGL 109
++ K + ++ +++ + G++P+L + ++ L M + G+
Sbjct: 140 MIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGV 199
Query: 110 TPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKA 169
+ + Y L + +KA K+LSEM +G+ P + YN L+S YC ++ +A
Sbjct: 200 VANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYC--KKSMHFEA 257
Query: 170 VGILRVMAKRGLSPDAVSYTTVISGF 195
+ + M + G++P+ V+Y + I GF
Sbjct: 258 LSVQDRMERSGVAPNIVTYNSFIHGF 283
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 7/168 (4%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
L+ C+ ++R+A + M + GV N N++I G C MN
Sbjct: 337 LMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWS 396
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERERVE 167
L PD +TY +L C D+A K+ +M + + P+V+ YN L+ Y +G V
Sbjct: 397 LKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDV- 455
Query: 168 KAVGILRVMAKRGLSPDAVSYTTVISGFCYL---DEPELQWRSLQGTG 212
+ + ++M KRG++ D +S +T++ L +E W ++ G
Sbjct: 456 --LSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARG 501
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 26 SVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVI 85
+V YN I G+A G+ E + ++ + M+++GV N+V+ ++I
Sbjct: 260 NVVTYNSLINGYAMIGDVEGMTRVL----------------RLMSERGVSRNVVTYTSLI 303
Query: 86 QGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLS 145
+G C + K L D++ Y L C + A +V MI G+
Sbjct: 304 KGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVR 363
Query: 146 PSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC---YLDE 200
+ I N L++ YC + ++ +A I M L PD +Y T++ G+C Y+DE
Sbjct: 364 TNTTICNSLINGYC--KSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDE 419
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 76 PNLVSSNAVIQGLCXX-XXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYK 134
PN + N I GLC ++ PDE TY L + +KA+
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 135 VLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISG 194
+ EM ++G+ P++V YN L+ C + V++A +L + ++G++P+A++Y T+I G
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLC--KLGNVDRAQRLLHKLPQKGITPNAITYNTLIDG 834
Query: 195 F 195
Sbjct: 835 L 835
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 21/191 (10%)
Query: 25 PSVNIYNFRIRGFAGAGNFE-------------------SESALIVARCKEKKVREAFGL 65
P+V YN ++G++ G F S S L+ A K EA L
Sbjct: 434 PTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKL 493
Query: 66 WKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCD 125
W+ + +G+ + ++ N +I GLC +N P TY +L
Sbjct: 494 WENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYK 553
Query: 126 RCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDA 185
+A+ V M +G+ P++ +YN L+S + + K ++ + RGL+P
Sbjct: 554 VGNLKEAFAVKEYMERKGIFPTIEMYNTLISG--AFKYRHLNKVADLVIELRARGLTPTV 611
Query: 186 VSYTTVISGFC 196
+Y +I+G+C
Sbjct: 612 ATYGALITGWC 622
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 20/144 (13%)
Query: 5 LSSTATLKTFRQIFRNGMSP----PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVR 60
L L+ R++F + +S P Y I G A AG+ +
Sbjct: 729 LCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGD----------------IN 772
Query: 61 EAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLF 120
+AF L M KG+ PN+V+ NA+I+GLC + +KG+TP+ TY +L
Sbjct: 773 KAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLI 832
Query: 121 QLLCDRCEADKAYKVLSEMIVRGL 144
L +A ++ +MI +GL
Sbjct: 833 DGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 19/142 (13%)
Query: 16 QIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVE 75
IFR P+V Y G+ GN ++EAF + + M KG+
Sbjct: 533 NIFR---CKPAVQTYQALSHGYYKVGN----------------LKEAFAVKEYMERKGIF 573
Query: 76 PNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKV 135
P + N +I G + +GLTP TY +L C+ DKAY
Sbjct: 574 PTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYAT 633
Query: 136 LSEMIVRGLSPSVVIYNKLVSA 157
EMI +G++ +V I +K+ ++
Sbjct: 634 CFEMIEKGITLNVNICSKIANS 655
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 97/243 (39%), Gaps = 57/243 (23%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFE------------------SESALIVARCK 55
F++IF G+ P V Y I G+ G + + S +++ C
Sbjct: 396 FQEIFELGLLPDCV-CYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACS 454
Query: 56 E-KKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
+ +A +++ M +G++ ++V+ N ++ G M G++PD
Sbjct: 455 RFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVA 514
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPS--------------------------- 147
TY L + R D+A +++SE+I RG PS
Sbjct: 515 TYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYM 574
Query: 148 --------VVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLD 199
VV + L+ YC + +R+EKA+ + + GL PD V Y T+I G+C +
Sbjct: 575 ADLRMKPDVVTCSALLHGYC--KAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVG 632
Query: 200 EPE 202
+ E
Sbjct: 633 DIE 635
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 56/181 (30%)
Query: 16 QIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVE 75
++ R G P ++ + I GF+ G+F+ EAF LW M D ++
Sbjct: 538 ELIRRGFVPSTLAFTDV-IGGFSKRGDFQ----------------EAFILWFYMADLRMK 580
Query: 76 PNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKV 135
P++V+ +A++ G C +KA +
Sbjct: 581 PDVVTCSALLHGYCKAQ-----------------------------------RMEKAIVL 605
Query: 136 LSEMIVRGLSPSVVIYNKLVSAYC-VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISG 194
++++ GL P VV+YN L+ YC VG+ +EKA ++ +M +RG+ P+ ++ ++ G
Sbjct: 606 FNKLLDAGLKPDVVLYNTLIHGYCSVGD---IEKACELIGLMVQRGMLPNESTHHALVLG 662
Query: 195 F 195
Sbjct: 663 L 663
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 73/173 (42%), Gaps = 7/173 (4%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S I C + + + L M G+ P++V+ I LC +
Sbjct: 275 SLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKL 334
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERER 165
G++ D + S+ C + ++A K++ +R P++ +Y+ +S C G+ R
Sbjct: 335 FGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLR 391
Query: 166 VEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTGRGLGPP 218
A I + + + GL PD V YTT+I G+C L + ++ + PP
Sbjct: 392 ---ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPP 441
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 97/243 (39%), Gaps = 57/243 (23%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFE------------------SESALIVARCK 55
F++IF G+ P V Y I G+ G + + S +++ C
Sbjct: 396 FQEIFELGLLPDCV-CYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACS 454
Query: 56 E-KKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
+ +A +++ M +G++ ++V+ N ++ G M G++PD
Sbjct: 455 RFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVA 514
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPS--------------------------- 147
TY L + R D+A +++SE+I RG PS
Sbjct: 515 TYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYM 574
Query: 148 --------VVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLD 199
VV + L+ YC + +R+EKA+ + + GL PD V Y T+I G+C +
Sbjct: 575 ADLRMKPDVVTCSALLHGYC--KAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVG 632
Query: 200 EPE 202
+ E
Sbjct: 633 DIE 635
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 56/181 (30%)
Query: 16 QIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVE 75
++ R G P ++ + I GF+ G+F+ EAF LW M D ++
Sbjct: 538 ELIRRGFVPSTLAFTDV-IGGFSKRGDFQ----------------EAFILWFYMADLRMK 580
Query: 76 PNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKV 135
P++V+ +A++ G C +KA +
Sbjct: 581 PDVVTCSALLHGYCKAQ-----------------------------------RMEKAIVL 605
Query: 136 LSEMIVRGLSPSVVIYNKLVSAYC-VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISG 194
++++ GL P VV+YN L+ YC VG+ +EKA ++ +M +RG+ P+ ++ ++ G
Sbjct: 606 FNKLLDAGLKPDVVLYNTLIHGYCSVGD---IEKACELIGLMVQRGMLPNESTHHALVLG 662
Query: 195 F 195
Sbjct: 663 L 663
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 73/173 (42%), Gaps = 7/173 (4%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S I C + + + L M G+ P++V+ I LC +
Sbjct: 275 SLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKL 334
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERER 165
G++ D + S+ C + ++A K++ +R P++ +Y+ +S C G+ R
Sbjct: 335 FGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLR 391
Query: 166 VEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTGRGLGPP 218
A I + + + GL PD V YTT+I G+C L + ++ + PP
Sbjct: 392 ---ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPP 441
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 5/162 (3%)
Query: 54 CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDE 113
CK KV +A+ L + M KG EP +V+ +VI GL K + +
Sbjct: 598 CKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNV 657
Query: 114 NTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGIL 173
Y SL D+AY +L E++ +GL+P++ +N L+ A + + E + +A+
Sbjct: 658 VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA--LVKAEEINEALVCF 715
Query: 174 RVMAKRGLSPDAVSYTTVISGFCYL---DEPELQWRSLQGTG 212
+ M + +P+ V+Y +I+G C + ++ + W+ +Q G
Sbjct: 716 QSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG 757
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 67/164 (40%), Gaps = 2/164 (1%)
Query: 39 GAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXX 98
A N + + LI C+ K+ AF L +M G+ PN+ + N ++ LC
Sbjct: 373 AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEAC 432
Query: 99 XXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAY 158
M+ K TPDE T+ SL L D AYKV +M+ + ++Y L+ +
Sbjct: 433 AMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNF 492
Query: 159 CVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPE 202
R E I + M + SPD T + EPE
Sbjct: 493 F--NHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPE 534
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 2/156 (1%)
Query: 45 SESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXM 104
S S LI K E + L+ +M ++G + + N VI G C M
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
Query: 105 NRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERE 164
KG P TY S+ L D+AY + E + + +VVIY+ L+ + G+
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGF--GKVG 671
Query: 165 RVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDE 200
R+++A IL + ++GL+P+ ++ +++ +E
Sbjct: 672 RIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEE 707
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 22/190 (11%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALI-----------------VARCKEK--KVREAFGL 65
P YN I G+ AG F+ +L+ + C K KV EA +
Sbjct: 306 PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKV 365
Query: 66 WKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCD 125
++ M K PNL + N +I LC M + GL P+ T + LC
Sbjct: 366 FEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCK 424
Query: 126 RCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDA 185
+ D+A + EM + +P + + L+ +G+ RV+ A + M ++
Sbjct: 425 SQKLDEACAMFEEMDYKVCTPDEITFCSLIDG--LGKVGRVDDAYKVYEKMLDSDCRTNS 482
Query: 186 VSYTTVISGF 195
+ YT++I F
Sbjct: 483 IVYTSLIKNF 492
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 73/188 (38%), Gaps = 19/188 (10%)
Query: 6 SSTATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGL 65
S L F+Q+ G P +V+++ IRGFA KE +V A L
Sbjct: 183 HSDMMLTLFQQMQELGYEP-TVHLFTTLIRGFA----------------KEGRVDSALSL 225
Query: 66 WKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCD 125
M ++ ++V N I + GL PDE TY S+ +LC
Sbjct: 226 LDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCK 285
Query: 126 RCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDA 185
D+A ++ + P YN ++ Y G + ++A +L +G P
Sbjct: 286 ANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGY--GSAGKFDEAYSLLERQRAKGSIPSV 343
Query: 186 VSYTTVIS 193
++Y +++
Sbjct: 344 IAYNCILT 351
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 2/149 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S+LI K ++ EA+ + + + KG+ PNL + N+++ L M
Sbjct: 661 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKE 720
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
TP++ TY L LC + +KA+ EM +G+ PS + Y ++S + + +
Sbjct: 721 LKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISG--LAKAGNI 778
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+A + G PD+ Y +I G
Sbjct: 779 AEAGALFDRFKANGGVPDSACYNAMIEGL 807
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 18/154 (11%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
P+ YN I GF CK+ +V +A + +M KG P++V+ + +
Sbjct: 8 PTTITYNSMIDGF----------------CKQDRVDDAKRMLDSMASKGCSPDVVTFSTL 51
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
I G C M+R+G+ + TY +L C + D A +L+EMI G+
Sbjct: 52 INGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV 111
Query: 145 SPSVVIYNKLVSAYCVGERERVEKAVGILRVMAK 178
+P + ++ +++ C ++ + KA IL + K
Sbjct: 112 APDYITFHCMLAGLC--SKKELRKAFAILEDLQK 143
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 104 MNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGER 163
M R + P TY S+ C + D A ++L M +G SP VV ++ L++ YC +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYC--KA 58
Query: 164 ERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+RV+ + I M +RG+ + V+YTT+I GFC
Sbjct: 59 KRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 91
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 76 PNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKV 135
P ++ N++I G C M KG +PD T+ +L C D ++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 136 LSEMIVRGLSPSVVIYNKLVSAYC-VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISG 194
EM RG+ + V Y L+ +C VG+ ++ A +L M G++PD +++ +++G
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGD---LDAAQDLLNEMISCGVAPDYITFHCMLAG 124
Query: 195 FC 196
C
Sbjct: 125 LC 126
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 82/185 (44%), Gaps = 19/185 (10%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMT 70
L+ ++++ + + SV +YN IRG +GN + A+G M
Sbjct: 285 LEVWKEMSQKNVPADSV-VYNVIIRGLCSSGNMVA----------------AYGFMCDMV 327
Query: 71 DKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEAD 130
+GV P++ + N +I LC M G+ PD+ +Y + Q LC + +
Sbjct: 328 KRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVN 387
Query: 131 KAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTT 190
+A + L M+ L P V+++N ++ Y G A+ +L +M G+ P+ +
Sbjct: 388 RANEFLLSMLKSSLLPEVLLWNVVIDGY--GRYGDTSSALSVLNLMLSYGVKPNVYTNNA 445
Query: 191 VISGF 195
+I G+
Sbjct: 446 LIHGY 450
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 75/202 (37%), Gaps = 41/202 (20%)
Query: 34 IRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXX 93
+R + N S + LI C V +A L+ M G+ PN V+ N ++ LC
Sbjct: 182 MREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGV 241
Query: 94 ---------------------------------------XXXXXXXXXXMNRKGLTPDEN 114
M++K + D
Sbjct: 242 IGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSV 301
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILR 174
Y + + LC AY + +M+ RG++P V YN L+SA C + + ++A +
Sbjct: 302 VYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALC--KEGKFDEACDLHG 359
Query: 175 VMAKRGLSPDAVSYTTVISGFC 196
M G++PD +SY +I G C
Sbjct: 360 TMQNGGVAPDQISYKVIIQGLC 381
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 22/206 (10%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
P V ++N I G+ G+ S A + M GV+PN+ ++NA+
Sbjct: 403 PEVLLWNVVIDGYGRYGDTSS----------------ALSVLNLMLSYGVKPNVYTNNAL 446
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
I G M + PD TY L C A+++ EM+ RG
Sbjct: 447 IHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGC 506
Query: 145 SPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQ 204
P ++ Y +LV C + R++KA +L + G++ D V + + + L P
Sbjct: 507 QPDIITYTELVRGLC--WKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEA 564
Query: 205 W----RSLQGTGRGLGPPIVLKFFFT 226
+ + L RG+ P +L T
Sbjct: 565 YLVYKKWLATRNRGVSCPSILNHMHT 590
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 75/191 (39%), Gaps = 41/191 (21%)
Query: 45 SESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXM 104
+ + L+ CK + +A GL + M + G PN VS N +I+GLC M
Sbjct: 158 THNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTM 217
Query: 105 NRKGLTPDENTYMSLFQLLC-----------------DRCEAD----------------- 130
N+ G+ P+ T + LC D +A+
Sbjct: 218 NKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFK 277
Query: 131 -----KAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDA 185
+A +V EM + + V+YN ++ C + A G + M KRG++PD
Sbjct: 278 NGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLC--SSGNMVAAYGFMCDMVKRGVNPDV 335
Query: 186 VSYTTVISGFC 196
+Y T+IS C
Sbjct: 336 FTYNTLISALC 346
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 2/141 (1%)
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
K V +A +WK M+ K V + V N +I+GLC M ++G+ PD
Sbjct: 277 KNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVF 336
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILR 174
TY +L LC + D+A + M G++P + Y ++ C+ V +A L
Sbjct: 337 TYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCI--HGDVNRANEFLL 394
Query: 175 VMAKRGLSPDAVSYTTVISGF 195
M K L P+ + + VI G+
Sbjct: 395 SMLKSSLLPEVLLWNVVIDGY 415
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 74/188 (39%), Gaps = 37/188 (19%)
Query: 46 ESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMN 105
S+++ C + K+ A L K M GV P L++ N ++ GLC M
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 106 RKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC----VG 161
G +P+ +Y +L + LC DKA + + M G+ P+ V N +V A C +G
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243
Query: 162 ERER---------------------------------VEKAVGILRVMAKRGLSPDAVSY 188
+ V +A+ + + M+++ + D+V Y
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVY 303
Query: 189 TTVISGFC 196
+I G C
Sbjct: 304 NVIIRGLC 311
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 90/195 (46%), Gaps = 17/195 (8%)
Query: 16 QIFRNGMSPPSVNIYNFRIRGFAGAGN----FESE---------SALIVARCKEKKVREA 62
QIF + M ++ + NF+ R AG+ F+ ++++ + +A
Sbjct: 591 QIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQA 650
Query: 63 FGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQL 122
G+ +++ + G+ P+LV+ N+++ + + L PD +Y ++ +
Sbjct: 651 EGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKG 710
Query: 123 LCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAY-CVGERERVEKAVGILRVMAKRGL 181
C R +A ++LSEM RG+ P + YN VS Y +G +E ++ MAK
Sbjct: 711 FCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIED---VIECMAKNDC 767
Query: 182 SPDAVSYTTVISGFC 196
P+ +++ V+ G+C
Sbjct: 768 RPNELTFKMVVDGYC 782
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 2/147 (1%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
L+ A + +EA G+ + MT KGV PN ++ VI M G
Sbjct: 357 LVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAG 416
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEK 168
P+ TY ++ LL + +++ K+L +M G SP+ +N ++ A C G + +
Sbjct: 417 CVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALC-GNKGMDKF 474
Query: 169 AVGILRVMAKRGLSPDAVSYTTVISGF 195
+ R M G PD ++ T+IS +
Sbjct: 475 VNRVFREMKSCGFEPDRDTFNTLISAY 501
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 2/136 (1%)
Query: 60 REAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSL 119
R+ G+ M KG++ + + + V+ + G P TY +L
Sbjct: 263 RKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNAL 322
Query: 120 FQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKR 179
Q+ +A VL EM V YN+LV+AY + +A G++ +M K+
Sbjct: 323 LQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSK--EAAGVIEMMTKK 380
Query: 180 GLSPDAVSYTTVISGF 195
G+ P+A++YTTVI +
Sbjct: 381 GVMPNAITYTTVIDAY 396
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 2/147 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S ++ A +E +REA + + G EP V+ NA++Q M
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
D TY L + +A V+ M +G+ P+ + Y ++ AY G+ +
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAY--GKAGKE 402
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVIS 193
++A+ + M + G P+ +Y V+S
Sbjct: 403 DEALKLFYSMKEAGCVPNTCTYNAVLS 429
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 6/150 (4%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+AL+ C+EK + +A ++ ++ + +P+L + N ++ G M
Sbjct: 184 NALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSGW---KSSEEAEAFFEEMKG 239
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
KGL PD TY SL + C E +KAYK++ +M +P V+ Y ++ +G +
Sbjct: 240 KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGG--LGLIGQP 297
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+KA +L+ M + G PD +Y I FC
Sbjct: 298 DKAREVLKEMKEYGCYPDVAAYNAAIRNFC 327
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
Query: 69 MTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCE 128
M KG++P++V+ N++I C M + TPD TY ++ L +
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 129 ADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSY 188
DKA +VL EM G P V YN + +C+ R+ A ++ M K+GLSP+A +Y
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIA--RRLGDADKLVDEMVKKGLSPNATTY 354
Query: 189 T 189
Sbjct: 355 N 355
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 142 RGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEP 201
+GL P VV YN L+ YC +RE +EKA ++ M + +PD ++YTTVI G + +P
Sbjct: 240 KGLKPDVVTYNSLIDVYC-KDRE-IEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQP 297
Query: 202 E 202
+
Sbjct: 298 D 298
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
++LI CK++++ +A+ L M ++ P++++ VI GL M
Sbjct: 250 NSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKE 309
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYN 152
G PD Y + + C A K++ EM+ +GLSP+ YN
Sbjct: 310 YGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYN 355
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Query: 66 WKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCD 125
+ M +GVEP + N ++ G M +G++PD+ T+ ++ C
Sbjct: 243 FNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCR 302
Query: 126 RCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDA 185
+ D+A K+ EM + PSVV Y ++ Y +RV+ + I M G+ P+A
Sbjct: 303 FKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAV--DRVDDGLRIFEEMRSSGIEPNA 360
Query: 186 VSYTTVISGFC 196
+Y+T++ G C
Sbjct: 361 TTYSTLLPGLC 371
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 24/198 (12%)
Query: 1 MSMRLSSTATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVR 60
+S+RL + L+ F + G+SP +N I GF C+ KK+
Sbjct: 267 LSLRLETA--LRFFEDMKTRGISPDDAT-FNTMINGF----------------CRFKKMD 307
Query: 61 EAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLF 120
EA L+ M + P++VS +I+G M G+ P+ TY +L
Sbjct: 308 EAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLL 367
Query: 121 QLLCDRCEADKAYKVLSEMIVRGLSP--SVVIYNKLVSAYCVGERERVEKAVGILRVMAK 178
LCD + +A +L M+ + ++P + + LVS G+ + A +L+ MA
Sbjct: 368 PGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGD---MAAATEVLKAMAT 424
Query: 179 RGLSPDAVSYTTVISGFC 196
+ +A Y +I C
Sbjct: 425 LNVPAEAGHYGVLIENQC 442
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 2/151 (1%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
LI + K V+E+ +++ M D GVE + S N++ + + M +G
Sbjct: 191 LIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEG 250
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEK 168
+ P +TY + + A + +M RG+SP +N +++ +C +++++
Sbjct: 251 VEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFC--RFKKMDE 308
Query: 169 AVGILRVMAKRGLSPDAVSYTTVISGFCYLD 199
A + M + P VSYTT+I G+ +D
Sbjct: 309 AEKLFVEMKGNKIGPSVVSYTTMIKGYLAVD 339
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 2 SMRLSSTATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGN---------------FESE 46
S ++ S L+ +++I R+ + V + N I GFA +G+ ++
Sbjct: 245 SNKIDSVMLLRLYKEIERDKLEL-DVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAK 303
Query: 47 SALIV----ARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXX 102
+A +V A + EA L++ + G++P + NA+++G
Sbjct: 304 TATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVS 363
Query: 103 XMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGE 162
M ++G++PDE+TY L + + A VL EM + P+ ++++L++ + +
Sbjct: 364 EMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGF--RD 421
Query: 163 RERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
R +K +L+ M G+ PD Y VI F
Sbjct: 422 RGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTF 454
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 69 MTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCE 128
M +G+ PN+V+ ++ M GL P Y +L R
Sbjct: 540 MKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGL 599
Query: 129 ADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSY 188
+++A M GL PS++ N L++A+ GE R +A +L+ M + G+ PD V+Y
Sbjct: 600 SEQAVNAFRVMTSDGLKPSLLALNSLINAF--GEDRRDAEAFAVLQYMKENGVKPDVVTY 657
Query: 189 TTVISGFCYLDE 200
TT++ +D+
Sbjct: 658 TTLMKALIRVDK 669
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 2/136 (1%)
Query: 61 EAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLF 120
A + M +G+EP+ V+ N +I C M R+G P TY +
Sbjct: 462 HAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMI 521
Query: 121 QLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRG 180
D+ D ++L +M +G+ P+VV + LV Y G+ R A+ L M G
Sbjct: 522 NSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVY--GKSGRFNDAIECLEEMKSVG 579
Query: 181 LSPDAVSYTTVISGFC 196
L P + Y +I+ +
Sbjct: 580 LKPSSTMYNALINAYA 595
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 86/228 (37%), Gaps = 47/228 (20%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
P + IYN G A G +EAF K M ++GV+P V+ N V
Sbjct: 464 PDIVIYNVLAGGLATNG----------------LAQEAFETLKMMENRGVKPTYVTHNMV 507
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPD----------------------------ENTY 116
I+GL + K D ++ Y
Sbjct: 508 IEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVY 567
Query: 117 MSLFQLLC-DRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRV 175
+LF LC ++ KA +L M G+ P +Y KL+ A+C V KA +
Sbjct: 568 FTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWC--RVNNVRKAREFFEI 625
Query: 176 MAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTGRGLGPPIVLKF 223
+ + + PD +YT +I+ +C L+EP+ + + R P V+ +
Sbjct: 626 LVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTY 673
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Query: 54 CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDE 113
C E ++ +A + M G++P++ +A+I+G M +K +
Sbjct: 302 CYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINC 361
Query: 114 NTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGIL 173
S+ Q C +AY + E +S V YN V+ +G+ +VE+A+ +
Sbjct: 362 VIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYN--VAFDALGKLGKVEEAIELF 419
Query: 174 RVMAKRGLSPDAVSYTTVISGFC 196
R M +G++PD ++YTT+I G C
Sbjct: 420 REMTGKGIAPDVINYTTLIGGCC 442
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 8/140 (5%)
Query: 58 KVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYM 117
KV EA L++ MT KG+ P++++ +I G C M+ G TPD Y
Sbjct: 411 KVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYN 470
Query: 118 SLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERERVEKAVGILRVM 176
L L A +A++ L M RG+ P+ V +N ++ GE ++KA +
Sbjct: 471 VLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGE---LDKAEAFYESL 527
Query: 177 AKRGLSPDAVSYTTVISGFC 196
+ DA +++ GFC
Sbjct: 528 EHKSRENDA----SMVKGFC 543
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 10/153 (6%)
Query: 49 LIVARCKEKK-VREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRK 107
L + C EK + +A L M GVEP +I C + K
Sbjct: 570 LFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTK 629
Query: 108 GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVE 167
+ PD TY + C E +AY + +M R + P VV Y+ L+++ +
Sbjct: 630 KIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS---------D 680
Query: 168 KAVGILRVMAKRGLSPDAVSYTTVISGFCYLDE 200
+ + R M + PD V YT +I+ +C+L++
Sbjct: 681 PELDMKREMEAFDVIPDVVYYTIMINRYCHLND 713
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 65/150 (43%), Gaps = 9/150 (6%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ +I C +++ + L+K M + + P++V+ +++ M
Sbjct: 702 TIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN-------KPERNLSREMKA 754
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+ PD Y L C + +A ++ +MI G+ P Y L++ C + +
Sbjct: 755 FDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIA--CCCKMGYL 812
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
++A I M + G+ PD V YT +I+G C
Sbjct: 813 KEAKMIFDRMIESGVKPDVVPYTALIAGCC 842
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 88/230 (38%), Gaps = 56/230 (24%)
Query: 25 PSVNIYNFRIRGFAGAGNFESE-------------------SALIVARCKEKKVREAFGL 65
P+V +YN + G+ +G+ + + LI C+ K A L
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 66 WKAMTDKGVEPNLVSSNAVIQ-----------------------------------GLCX 90
++ M +KG EPN+VS N +I+ GLC
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 91 XXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVI 150
+ K + P E Y SL + LC +A +A +++ E+ +G +P +
Sbjct: 311 EGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIA 370
Query: 151 YNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDE 200
LV + + R EKA G + M G+ PD+V++ ++ C D
Sbjct: 371 CTTLVEG--LRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDH 418
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 22/204 (10%)
Query: 9 ATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKA 68
A K ++ R+G P +V YN I + G N+ + EA ++
Sbjct: 382 AINKLLDEMVRDGCQPNTV-TYNRLIHSY-GRANY---------------LNEAMNVFNQ 424
Query: 69 MTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCE 128
M + G +P+ V+ +I M GL+PD TY + L
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 129 ADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSY 188
A+K+ EM+ +G +P++V YN ++ + + + A+ + R M G PD V+Y
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLH--AKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 189 TTVIS--GFC-YLDEPELQWRSLQ 209
+ V+ G C YL+E E + +Q
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQ 566
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 2/152 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + + ++ K + + A L++ M + G EP+ V+ + V++ L
Sbjct: 503 NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M +K PDE Y L L +KA++ M+ GL P+V N L+S +
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL-- 620
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVIS 193
++ +A +L+ M GL P +YT ++S
Sbjct: 621 RVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 22/204 (10%)
Query: 9 ATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKA 68
A K ++ R+G P +V YN I + G N+ + EA ++
Sbjct: 382 AINKLLDEMVRDGCQPNTV-TYNRLIHSY-GRANY---------------LNEAMNVFNQ 424
Query: 69 MTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCE 128
M + G +P+ V+ +I M GL+PD TY + L
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 129 ADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSY 188
A+K+ EM+ +G +P++V YN ++ + + + A+ + R M G PD V+Y
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLH--AKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 189 TTVIS--GFC-YLDEPELQWRSLQ 209
+ V+ G C YL+E E + +Q
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQ 566
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 2/152 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + + ++ K + + A L++ M + G EP+ V+ + V++ L
Sbjct: 503 NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M +K PDE Y L L +KA++ M+ GL P+V N L+S +
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL-- 620
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVIS 193
++ +A +L+ M GL P +YT ++S
Sbjct: 621 RVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 22/204 (10%)
Query: 9 ATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKA 68
A K ++ R+G P +V YN I + G N+ + EA ++
Sbjct: 382 AINKLLDEMVRDGCQPNTV-TYNRLIHSY-GRANY---------------LNEAMNVFNQ 424
Query: 69 MTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCE 128
M + G +P+ V+ +I M GL+PD TY + L
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 129 ADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSY 188
A+K+ EM+ +G +P++V YN ++ + + + A+ + R M G PD V+Y
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLH--AKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 189 TTVIS--GFC-YLDEPELQWRSLQ 209
+ V+ G C YL+E E + +Q
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQ 566
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 2/152 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + + ++ K + + A L++ M + G EP+ V+ + V++ L
Sbjct: 503 NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M +K PDE Y L L +KA++ M+ GL P+V N L+S +
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL-- 620
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVIS 193
++ +A +L+ M GL P +YT ++S
Sbjct: 621 RVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 22/201 (10%)
Query: 12 KTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTD 71
K ++ R+G P +V YN I + G N+ ++EA ++ M +
Sbjct: 380 KLLDEMVRDGCKPNTVT-YNRLIHSY-GRANY---------------LKEAMNVFNQMQE 422
Query: 72 KGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADK 131
G EP+ V+ +I M GL+PD TY + L
Sbjct: 423 AGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPA 482
Query: 132 AYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTV 191
A+++ EM+ +G +P++V +N +++ + + E A+ + R M G PD V+Y+ V
Sbjct: 483 AHRLFCEMVGQGCTPNLVTFNIMIALH--AKARNYETALKLYRDMQNAGFQPDKVTYSIV 540
Query: 192 IS--GFC-YLDEPELQWRSLQ 209
+ G C +L+E E + +Q
Sbjct: 541 MEVLGHCGFLEEAEGVFAEMQ 561
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 2/152 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + + +I K + A L++ M + G +P+ V+ + V++ L
Sbjct: 498 NLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVF 557
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M RK PDE Y L L DKA++ M+ GL P+V N L+S +
Sbjct: 558 AEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFL-- 615
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVIS 193
R+ +A +L+ M GL P +YT ++S
Sbjct: 616 RVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 106 RKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERER 165
+ G D +TY ++ L + + K+L EM+ G P+ V YN+L+ +Y G
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSY--GRANY 409
Query: 166 VEKAVGILRVMAKRGLSPDAVSYTTVIS 193
+++A+ + M + G PD V+Y T+I
Sbjct: 410 LKEAMNVFNQMQEAGCEPDRVTYCTLID 437
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 108 GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVE 167
G+TP+ T L + LC + + + AYKVL E+ GL P++V Y ++ Y R +E
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVA--RGDME 243
Query: 168 KAVGILRVMAKRGLSPDAVSYTTVISGFCYL 198
A +L M RG PDA +YT ++ G+C L
Sbjct: 244 SAKRVLEEMLDRGWYPDATTYTVLMDGYCKL 274
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 18/172 (10%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
P++ Y + G+ G+ ES K+V E M D+G P+ + +
Sbjct: 224 PNLVTYTTILGGYVARGDMESA----------KRVLEE------MLDRGWYPDATTYTVL 267
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
+ G C M + + P+E TY + + LC ++ +A + EM+ R
Sbjct: 268 MDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSF 327
Query: 145 SPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
P + K++ A C E +V++A G+ R M K PD +T+I C
Sbjct: 328 MPDSSLCCKVIDALC--EDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLC 377
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 8/188 (4%)
Query: 14 FRQIFRN----GMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAM 69
F + RN G S+ I+ RI F + S + L+ + ++ ++K
Sbjct: 123 FIDLLRNYGLAGRYESSMRIF-LRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNS 181
Query: 70 TDK-GVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCE 128
+ G+ PN+ + N +++ LC + GL P+ TY ++ R +
Sbjct: 182 KESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGD 241
Query: 129 ADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSY 188
+ A +VL EM+ RG P Y L+ YC + R +A ++ M K + P+ V+Y
Sbjct: 242 MESAKRVLEEMLDRGWYPDATTYTVLMDGYC--KLGRFSEAATVMDDMEKNEIEPNEVTY 299
Query: 189 TTVISGFC 196
+I C
Sbjct: 300 GVMIRALC 307
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 74/191 (38%), Gaps = 24/191 (12%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESA--------------------LIVARCKEKKVREAFG 64
P Y + G+ G F SE+A +I A CKEKK EA
Sbjct: 259 PDATTYTVLMDGYCKLGRF-SEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARN 317
Query: 65 LWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLC 124
++ M ++ P+ VI LC M + PD +L LC
Sbjct: 318 MFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLC 377
Query: 125 DRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPD 184
+A K+ E +G PS++ YN L++ C E+ + +A + M +R P+
Sbjct: 378 KEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMC--EKGELTEAGRLWDDMYERKCKPN 434
Query: 185 AVSYTTVISGF 195
A +Y +I G
Sbjct: 435 AFTYNVLIEGL 445
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 70/175 (40%), Gaps = 5/175 (2%)
Query: 37 FAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXX 96
F N + + L+ A CK+ + A+ + + G+ PNLV+ ++ G
Sbjct: 185 FGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMES 244
Query: 97 XXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVS 156
M +G PD TY L C +A V+ +M + P+ V Y ++
Sbjct: 245 AKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIR 304
Query: 157 AYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC---YLDEPELQWRSL 208
A C + ++ +A + M +R PD+ VI C +DE WR +
Sbjct: 305 ALC--KEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKM 357
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ +I A C++ + + +++ + G EP+L+S N +++ M
Sbjct: 197 NTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKS 256
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
K L+P+ +Y S + L + A ++ M G+SP V YN L++AY V +
Sbjct: 257 KNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNN--L 314
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
E+ + M ++GL+PD V+Y +I C
Sbjct: 315 EEVMKCYNEMKEKGLTPDTVTYCMLIPLLC 344
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDK-GVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMN 105
+AL+ A KK+ EA +K + +K G+ P+LV+ N +I+ LC +
Sbjct: 161 NALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELE 220
Query: 106 RKGLTPDENTYMSLFQLLCDR---CEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGE 162
+ G PD ++ +L + R E D+ + + M + LSP++ YN V +
Sbjct: 221 KNGFEPDLISFNTLLEEFYRRELFVEGDRIWDL---MKSKNLSPNIRSYNSRVRG--LTR 275
Query: 163 RERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
++ A+ ++ VM G+SPD +Y +I+ +
Sbjct: 276 NKKFTDALNLIDVMKTEGISPDVHTYNALITAY 308
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 76/190 (40%), Gaps = 21/190 (11%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGN---------------FESESALIVARCK 55
+KTF+++ P + YN I+ G+ FE + +
Sbjct: 177 MKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLE 236
Query: 56 EKKVREAF----GLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTP 111
E RE F +W M K + PN+ S N+ ++GL M +G++P
Sbjct: 237 EFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISP 296
Query: 112 DENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVG 171
D +TY +L ++ K +EM +GL+P V Y L+ C ++ +++AV
Sbjct: 297 DVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLC--KKGDLDRAVE 354
Query: 172 ILRVMAKRGL 181
+ K L
Sbjct: 355 VSEEAIKHKL 364
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 95/220 (43%), Gaps = 7/220 (3%)
Query: 2 SMRLSSTATLKTFRQIFRNGMSPPSVN--IYNFRI-RGFAGAGNFESESALIVARCKEKK 58
+MR ++TF + R V+ IY F + + N + + L+ A CK K
Sbjct: 159 AMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKN 218
Query: 59 VREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMS 118
VR+A +++ M D+ P+ + + +++G M G PD TY
Sbjct: 219 VRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSI 277
Query: 119 LFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAK 178
+ +LC D+A ++ M P+ IY+ LV Y G R+E+AV M +
Sbjct: 278 MVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTY--GTENRLEEAVDTFLEMER 335
Query: 179 RGLSPDAVSYTTVISGFCYLDEPELQWRSLQG-TGRGLGP 217
G+ D + ++I FC + + +R L+ +G+ P
Sbjct: 336 SGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTP 375
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 71/150 (47%), Gaps = 3/150 (2%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S L+ E ++ EA + M G++ ++ N++I C M
Sbjct: 311 SVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKS 370
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
KG+TP+ + + + L +R E D+A+ V +MI + P Y ++ +C E++ +
Sbjct: 371 KGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFC--EKKEM 427
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
E A + + M K+G+ P +++ +I+G C
Sbjct: 428 ETADKVWKYMRKKGVFPSMHTFSVLINGLC 457
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S ++ CK +V EA G+ ++M +P + ++ M R
Sbjct: 276 SIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMER 335
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
G+ D + SL C Y+VL EM +G++P+ N ++ + ER
Sbjct: 336 SGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRH--LIERGEK 393
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQ---WRSLQGTG 212
++A + R M K PDA +YT VI FC E E W+ ++ G
Sbjct: 394 DEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKG 441
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 21/177 (11%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFE-----------------SESALIVAR 53
+ TF ++ R+GM V ++N I F A + S+S I+ R
Sbjct: 327 VDTFLEMERSGMKA-DVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILR 385
Query: 54 --CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTP 111
+ + EAF +++ M K EP+ + VI+ C M +KG+ P
Sbjct: 386 HLIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFP 444
Query: 112 DENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEK 168
+T+ L LC+ KA +L EMI G+ PS V + +L ERE V K
Sbjct: 445 SMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLK 501
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 87/212 (41%), Gaps = 21/212 (9%)
Query: 13 TFRQIFRNGMSPPSV------NIYN-----------FRIRGFAGAGNFESESALIVARCK 55
TF ++ R G +P +V ++Y F + G + S + +I A K
Sbjct: 686 TFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGK 745
Query: 56 EKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENT 115
K K M G +L + N ++ M + PD T
Sbjct: 746 NKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYT 805
Query: 116 YMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRV 175
Y + + ++ D+ VL E+ GL P + YN L+ AY +G VE+AVG+++
Sbjct: 806 YNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIG--GMVEEAVGLVKE 863
Query: 176 MAKRGLSPDAVSYTTVISGFCYLDE--PELQW 205
M R + PD V+YT +++ DE ++W
Sbjct: 864 MRGRNIIPDKVTYTNLVTALRRNDEFLEAIKW 895
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 85/182 (46%), Gaps = 3/182 (1%)
Query: 12 KTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTD 71
K R++ ++G +V+ + + + + + ++L+ A KE + A ++ + D
Sbjct: 208 KVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD 267
Query: 72 KGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADK 131
++P+ + N +I G C M TPD TY S + C + +
Sbjct: 268 -TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRR 326
Query: 132 AYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTV 191
++L EM G +P+VV Y + + +G+ ++V +A+G+ M + G PDA Y+++
Sbjct: 327 VNEMLEEMRENGCNPNVVTYT--IVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSL 384
Query: 192 IS 193
I
Sbjct: 385 IH 386
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 72/190 (37%), Gaps = 24/190 (12%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESAL-------------------IVARCKEKKVREAFGL 65
P +N I GF A F+ A+ + A CKE R +
Sbjct: 271 PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEM 330
Query: 66 WKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCD 125
+ M + G PN+V+ V+ L M G PD Y SL +L
Sbjct: 331 LEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSK 390
Query: 126 RCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAK---RGLS 182
A ++ +M +G+ V++YN ++SA R+ E A+ +L+ M S
Sbjct: 391 TGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRD--EMALRLLKRMEDEEGESCS 448
Query: 183 PDAVSYTTVI 192
P+ +Y ++
Sbjct: 449 PNVETYAPLL 458
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 22/175 (12%)
Query: 30 YNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLC 89
YN IR FA G+ LI K M G+ P++++ ++I G C
Sbjct: 168 YNLVIRLFADKGDLNIADMLI----------------KEMDCVGLYPDVITYTSMINGYC 211
Query: 90 XXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRG----LS 145
M++ + TY + + +C + ++A ++L+EM +S
Sbjct: 212 NAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLIS 271
Query: 146 PSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDE 200
P+ V Y ++ A+C E+ RVE+A+ +L M RG P+ V+ +I G DE
Sbjct: 272 PNAVTYTLVIQAFC--EKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDE 324
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 6/140 (4%)
Query: 61 EAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLF 120
EA + + + V + V+ N VI+ M+ GL PD TY S+
Sbjct: 148 EALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMI 207
Query: 121 QLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRG 180
C+ + D A+++ EM + V Y++++ C + +E+A+ +L M K
Sbjct: 208 NGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVC--KSGDMERALELLAEMEKED 265
Query: 181 ----LSPDAVSYTTVISGFC 196
+SP+AV+YT VI FC
Sbjct: 266 GGGLISPNAVTYTLVIQAFC 285
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 76/200 (38%), Gaps = 28/200 (14%)
Query: 25 PSVNIYNFRIRGFAGAGNFESE-------------------SALIVARCKEKKVREAFGL 65
P V Y I G+ AG + S ++ CK + A L
Sbjct: 198 PDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALEL 257
Query: 66 WKAMT--DKG--VEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQ 121
M D G + PN V+ VIQ C M +G P+ T L Q
Sbjct: 258 LAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQ 317
Query: 122 LLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG--ERERVEKAVGILRVMAKR 179
+ E D+ K LS++I + + V ++ S+ V +R E+A I R+M R
Sbjct: 318 GV---LENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVR 374
Query: 180 GLSPDAVSYTTVISGFCYLD 199
G+ PD ++ + V C L+
Sbjct: 375 GVRPDGLACSHVFRELCLLE 394
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 19/182 (10%)
Query: 12 KTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTD 71
+ F ++ R+G SP S YN + G GN K A M +
Sbjct: 275 RLFDEMARDGFSPDSYT-YNILLH-ILGKGN---------------KPLAALTTLNHMKE 317
Query: 72 KGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADK 131
G++P+++ +I GL M + G PD Y + E DK
Sbjct: 318 VGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDK 377
Query: 132 AYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTV 191
A ++ EM V+G P+V YN ++ C+ R +A +L+ M RG +P+ V Y+T+
Sbjct: 378 AKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFR--EACWLLKEMESRGCNPNFVVYSTL 435
Query: 192 IS 193
+S
Sbjct: 436 VS 437
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 5/152 (3%)
Query: 65 LWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLC 124
++K M + G P++++ N ++ M R G +PD TY L +L
Sbjct: 241 VYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILG 300
Query: 125 DRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPD 184
+ A L+ M G+ PSV+ Y L+ + +E L M K G PD
Sbjct: 301 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDG--LSRAGNLEACKYFLDEMVKAGCRPD 358
Query: 185 AVSYTTVISGFCY---LDEPELQWRSLQGTGR 213
V YT +I+G+ LD+ + +R + G+
Sbjct: 359 VVCYTVMITGYVVSGELDKAKEMFREMTVKGQ 390
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 63/159 (39%), Gaps = 5/159 (3%)
Query: 65 LWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLC 124
L+ M G P+ + N ++ L M G+ P Y +L L
Sbjct: 276 LFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLS 335
Query: 125 DRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCV-GERERVEKAVGILRVMAKRGLSP 183
+ L EM+ G P VV Y +++ Y V GE ++KA + R M +G P
Sbjct: 336 RAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGE---LDKAKEMFREMTVKGQLP 392
Query: 184 DAVSYTTVISGFCYLDE-PELQWRSLQGTGRGLGPPIVL 221
+ +Y ++I G C E E W + RG P V+
Sbjct: 393 NVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVV 431
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 42 NFESESALIVARCKEKKVREAF---GLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXX 98
N S + +I CK +R A G M+ V PN V+ N+VI G C
Sbjct: 252 NVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAE 311
Query: 99 XXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAY 158
M + G+ +E TY +L +D+A ++ EM +GL + VIYN +V Y
Sbjct: 312 RIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIV--Y 369
Query: 159 CVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+ +E A+ +LR M + + D + V+ G C
Sbjct: 370 WLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLC 407
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 25/209 (11%)
Query: 20 NGMSPPSVNIYNFRIRGFAGAG-------------------NFESESALIVARCKEKKVR 60
N +SP +V YN I GF AG N + AL+ A +
Sbjct: 285 NFVSPNAVT-YNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSD 343
Query: 61 EAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLF 120
EA L MT KG+ N V N+++ L MN K + D T +
Sbjct: 344 EALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVV 403
Query: 121 QLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRG 180
+ LC +A + ++ + L +V +N L+ + +++ A IL M +G
Sbjct: 404 RGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFV--RDKKLACADQILGSMLVQG 461
Query: 181 LSPDAVSYTTVISGFCYLDEPELQWRSLQ 209
LS DA+S+ T+I G YL E +L+ R+L+
Sbjct: 462 LSLDAISFGTLIDG--YLKEGKLE-RALE 487
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
LI KE K+ A ++ M NLV N+++ GL M K
Sbjct: 472 LIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKD 531
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRG--LSPSVVIYNKLVSAYCVGERERV 166
+ TY +L ++A +LS+M + S S+V +N +++ C +
Sbjct: 532 IV----TYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLC--KFGSY 585
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGF 195
EKA +L+ M +RG+ PD+++Y T+I+ F
Sbjct: 586 EKAKEVLKFMVERGVVPDSITYGTLITSF 614
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 104 MNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGE 162
M+ G + NT+ + C + +A V M+ G+ P+VV +N ++ C G+
Sbjct: 209 MDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGD 268
Query: 163 RERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWR 206
+ +G + +M+ +SP+AV+Y +VI+GFC +L R
Sbjct: 269 MRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAER 312
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
+I CK K EA ++ + G++P++ + N +I+ M R+G
Sbjct: 20 IIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR----FSSLGRAEKLYAEMIRRG 75
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEK 168
L PD TY S+ LC + + +A KV S S +N L++ YC + RV+
Sbjct: 76 LVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTFNTLINGYC--KATRVKD 124
Query: 169 AVGILRVMAKRGLSPDAVSYTTVISGF 195
+ + M +RG+ + ++YTT+I GF
Sbjct: 125 GMNLFCEMYRRGIVANVITYTTLIHGF 151
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 104 MNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGER 163
M + D Y + LC + D+A + + +++ GL P V YN ++ +G
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSLGRA 64
Query: 164 ERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
E++ M +RGL PD ++Y ++I G C
Sbjct: 65 EKLYAE------MIRRGLVPDTITYNSMIHGLC 91
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 7/100 (7%)
Query: 104 MNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCV-GE 162
M+++GL + TY +L Q L + D A ++ EM+ G+ P ++ YN L+ C G+
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 163 RE------RVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
E +VE + ++ +G+ P+ V+YTT+ISGFC
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFC 106
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 11/137 (8%)
Query: 65 LWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLC 124
L++ M+ +G+ N V+ +IQGL M G+ PD TY L LC
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 125 DRCEADKA---------YKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRV 175
+ +KA + + + ++G+ P+VV Y ++S +C ++ E+A + R
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFC--KKGFKEEAYTLFRK 120
Query: 176 MAKRGLSPDAVSYTTVI 192
M + G PD+ +Y T+I
Sbjct: 121 MKEDGPLPDSGTYNTLI 137
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKG 73
F+++ +G+ PP + YN + G G E AL+ KV + + L+ +++ KG
Sbjct: 39 FKEMVSDGV-PPDIMTYNILLDGLCKNGKLEK--ALVAG-----KVEDGWDLFCSLSLKG 90
Query: 74 VEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQ 121
V+PN+V+ +I G C M G PD TY +L +
Sbjct: 91 VKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIR 138
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 2/143 (1%)
Query: 54 CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDE 113
C+ K ++ ++ KG L S + +I LC M ++GL PD
Sbjct: 373 CRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDV 432
Query: 114 NTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGIL 173
+ Y +L + C A K+ EM V G ++ YN L+ + E E+++ +
Sbjct: 433 SLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRK--LSEEGEAEESLRLF 490
Query: 174 RVMAKRGLSPDAVSYTTVISGFC 196
M +RG+ PD Y ++I G C
Sbjct: 491 DKMLERGIEPDETIYMSLIEGLC 513
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 2/139 (1%)
Query: 41 GNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXX 100
+S S +I CK +VRE++ + M +G+ P++ NA+I+ C
Sbjct: 395 SELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKL 454
Query: 101 XXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCV 160
M +G + TY L + L + EA+++ ++ +M+ RG+ P IY L+ C
Sbjct: 455 WDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLC- 513
Query: 161 GERERVEKAVGILRVMAKR 179
+ ++E A+ + R +R
Sbjct: 514 -KETKIEAAMEVFRKCMER 531
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 48 ALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRK 107
A++ CK+ V+EA L+ M DKG P +V AV++ C M
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 108 GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVE 167
G+ P+ +Y L Q L + D A SEM+ G SP+V + +LV A C + VE
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALC--RVKGVE 253
Query: 168 KAVGILRVMAKRGLSPDAVSYTTVISGFCYLDE----PELQWRSL 208
+A + + ++G AV+ V ++D+ P L W ++
Sbjct: 254 QAQSAIDTLNQKGF---AVNVKAVKE---FMDKRAPFPSLAWEAI 292
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 48 ALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRK 107
A++ CK+ V+EA L+ M DKG P +V AV++ C M
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 108 GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVE 167
G+ P+ +Y L Q L + D A SEM+ G SP+V + +LV A C + VE
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALC--RVKGVE 253
Query: 168 KAVGILRVMAKRGLSPDAVSYTTVISGFCYLDE----PELQWRSL 208
+A + + ++G AV+ V ++D+ P L W ++
Sbjct: 254 QAQSAIDTLNQKGF---AVNVKAVKE---FMDKRAPFPSLAWEAI 292
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 83/185 (44%), Gaps = 12/185 (6%)
Query: 21 GMSPPSVN-IYNFRIRGFAGAGNFESESA---------LIVARCKEKKVREAFGLWKAMT 70
G++PP ++ + N ++ + G + A + A C ++ A + M
Sbjct: 445 GINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMV 504
Query: 71 DKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEAD 130
+ G P S N+VI+ L + PD +TY+ + LC + + D
Sbjct: 505 NLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRD 564
Query: 131 KAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTT 190
A+ ++ M GL P+V IY+ ++ + +G++ RV +A M + G+ PD ++Y
Sbjct: 565 AAFAIIDAMEELGLRPTVAIYSSIIGS--LGKQGRVVEAEETFAKMLESGIQPDEIAYMI 622
Query: 191 VISGF 195
+I+ +
Sbjct: 623 MINTY 627
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 4/154 (2%)
Query: 44 ESESALIVAR--CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
+ ++ LIV CK+ AF + AM + G+ P + +++I L
Sbjct: 546 DVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETF 605
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M G+ PDE YM + D+A +++ E++ L PS Y L+S +
Sbjct: 606 AKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFV-- 663
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+ +EK L M + GLSP+ V YT +I F
Sbjct: 664 KMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHF 697
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 5/155 (3%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + +I C ++ EA+ ++M +G+ PNLV+ +++
Sbjct: 793 NLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLF 852
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
N PD+ Y +L + LCD A ++ EM G++P+ Y KL+ C
Sbjct: 853 EGTN---CEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYS 909
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
R +E AV +++ MA + P ++++T +I C
Sbjct: 910 -RLTME-AVKVVKDMAALDIWPRSINHTWLIYILC 942
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 82/195 (42%), Gaps = 20/195 (10%)
Query: 2 SMRLSSTATL-KTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVR 60
+ RL T L + ++ ++G SP + YN + A GN K
Sbjct: 267 NFRLGKTDRLYRLLDEMVKDGFSP-DLYTYNILLHHLA-TGN---------------KPL 309
Query: 61 EAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLF 120
A L M + GVEP ++ +I GL + G TPD Y +
Sbjct: 310 AALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMI 369
Query: 121 QLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRG 180
E +KA ++ EM +G P+V YN ++ +C+ + ++A +L+ M RG
Sbjct: 370 TGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMA--GKFKEACALLKEMESRG 427
Query: 181 LSPDAVSYTTVISGF 195
+P+ V Y+T+++
Sbjct: 428 CNPNFVVYSTLVNNL 442
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 73/183 (39%), Gaps = 19/183 (10%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKG 73
+ Q+ +G +P ++ + I FA NF + K + L M G
Sbjct: 245 YEQMLEDGFTP---DVLTYNIVMFA---NF-----------RLGKTDRLYRLLDEMVKDG 287
Query: 74 VEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAY 133
P+L + N ++ L M G+ P + +L L + +
Sbjct: 288 FSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACK 347
Query: 134 KVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVIS 193
+ E + G +P VV Y +++ Y G +EKA + + M ++G P+ +Y ++I
Sbjct: 348 YFMDETVKVGCTPDVVCYTVMITGYISGGE--LEKAEEMFKEMTEKGQLPNVFTYNSMIR 405
Query: 194 GFC 196
GFC
Sbjct: 406 GFC 408
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 2/120 (1%)
Query: 76 PNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKV 135
P S NA++ L M G TPD TY + + D+ Y++
Sbjct: 220 PYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRL 279
Query: 136 LSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
L EM+ G SP + YN L+ G + A+ +L M + G+ P + +TT+I G
Sbjct: 280 LDEMVKDGFSPDLYTYNILLHHLATGNKPLA--ALNLLNHMREVGVEPGVIHFTTLIDGL 337
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Query: 63 FGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQL 122
GL+ M +G++P++V+ N ++ MN G+ PD TY L +
Sbjct: 232 LGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVET 291
Query: 123 LCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLS 182
+K +L EM G P + YN L+ AY + +++A+G+ M G +
Sbjct: 292 FGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYA--KSGSIKEAMGVFHQMQAAGCT 349
Query: 183 PDAVSYTTVISGF 195
P+A +Y+ +++ F
Sbjct: 350 PNANTYSVLLNLF 362
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Query: 111 PDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAV 170
P+E+ Y + LL DK +V EM +G+S SV Y L++AY G R E ++
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAY--GRNGRYETSL 196
Query: 171 GILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGT-----GRGLGPPIV 220
+L M +SP ++Y TVI+ L W L G G+ P IV
Sbjct: 197 ELLDRMKNEKISPSILTYNTVINACA---RGGLDWEGLLGLFAEMRHEGIQPDIV 248
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 18/179 (10%)
Query: 15 RQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGV 74
+ + NG S + I+N +RG++ G + +CKE WK M +GV
Sbjct: 177 KNVIGNGFSVSNTKIHNLILRGWSKLGWW--------GKCKE--------YWKKMDTEGV 220
Query: 75 EPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYK 134
+L S + + +C M + + D Y ++ + + + +
Sbjct: 221 TKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIR 280
Query: 135 VLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVIS 193
V EM RG P+V +N ++ C E R+ A +L M KRG PD+++Y + S
Sbjct: 281 VFREMRERGCEPNVATHNTIIKLLC--EDGRMRDAYRMLDEMPKRGCQPDSITYMCLFS 337
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 19/141 (13%)
Query: 63 FGL--WKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLF 120
FG+ ++ M ++G EPN+ + N +I+ LC M ++G PD TYM LF
Sbjct: 277 FGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLF 336
Query: 121 QLLCDRCEADKAYKVLS---EMIVRGLSPSVVIYNKLVSAYCVGERER---VEKAVGILR 174
L +K ++LS MI G+ P + Y L+ + ER ++ + + +
Sbjct: 337 SRL------EKPSEILSLFGRMIRSGVRPKMDTYVMLMRKF-----ERWGFLQPVLYVWK 385
Query: 175 VMAKRGLSPDAVSYTTVISGF 195
M + G +PD+ +Y VI
Sbjct: 386 TMKESGDTPDSAAYNAVIDAL 406
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 21/196 (10%)
Query: 13 TFRQIFRN----GMSPPSVNIYNFRIRGFAGAGNFESESA---LIVARCKEKKVREA--- 62
TFR +F+ + +++ Y+ ++ F N E++ L+ A C+ K V EA
Sbjct: 119 TFRIVFKRYVTAHLVQEAIDAYD-KLDDF----NLRDETSFYNLVDALCEHKHVVEAEEL 173
Query: 63 -FGLWKAMTDKGVE-PNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLF 120
FG K + G N N +++G M+ +G+T D +Y
Sbjct: 174 CFG--KNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYM 231
Query: 121 QLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRG 180
++C + KA K+ EM R + VV YN ++ A +G + VE + + R M +RG
Sbjct: 232 DIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRA--IGASQGVEFGIRVFREMRERG 289
Query: 181 LSPDAVSYTTVISGFC 196
P+ ++ T+I C
Sbjct: 290 CEPNVATHNTIIKLLC 305
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 2/150 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
S +I + C+ + V++A L M KG P N V+ M
Sbjct: 376 SDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMES 435
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+GL PD TY + D+A ++L+E + S V Y+ L+ YC + E
Sbjct: 436 RGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYC--KIEEY 493
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
++A+ +L M + G+ P+A Y +I FC
Sbjct: 494 DEALKLLNEMDRFGVQPNADEYNKLIQSFC 523
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
Query: 49 LIVARC-KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRK 107
L+V C K + EA + K M +G++P++ + +I G +K
Sbjct: 412 LVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKK 471
Query: 108 GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVE 167
TY +L + C E D+A K+L+EM G+ P+ YNKL+ ++C+ + E
Sbjct: 472 HKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDW-E 530
Query: 168 KAVGILRVMAKRGLSPDAVS 187
KA + M ++GL +A+S
Sbjct: 531 KAEVLFEEMKQKGLHLNAIS 550
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 18/179 (10%)
Query: 49 LIVARCKEKKVREAFGLWK--AMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXX---- 102
+I CKE K EA+ +++ +K + P V++ +I LC
Sbjct: 307 IITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVAT--LITALCKNDGTITFAQEMLGDLS 364
Query: 103 -XMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
R+G+ P + + LC A +L +MI +G +P ++N +V A
Sbjct: 365 GEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHA--CS 418
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC---YLDEPELQWRSLQGTGRGLGP 217
+ +++A +L++M RGL PD +YT +ISG+ +DE + + + L P
Sbjct: 419 KTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSP 477
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 2/159 (1%)
Query: 54 CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDE 113
C+ V EAF + M G+ ++ + ++ G M + G +P+
Sbjct: 223 CRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNL 282
Query: 114 NTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGIL 173
TY SL + D D+A+ VLS++ GL+P +V+ N ++ Y R E+A +
Sbjct: 283 VTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTY--TRLGRFEEARKVF 340
Query: 174 RVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTG 212
+ KR L PD ++ +++S C + +L R G G
Sbjct: 341 TSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIG 379
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERER 165
+G P+ + + +L C +A++V+ MI G+S SV +++ LVS + GE
Sbjct: 206 EGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEP-- 263
Query: 166 VEKAVGILRVMAKRGLSPDAVSYTTVISGFCYL---DEPELQWRSLQGTGRGLGPPIVL 221
+KAV + M + G SP+ V+YT++I GF L DE +Q GL P IVL
Sbjct: 264 -QKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQ--SEGLAPDIVL 319
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 90/199 (45%), Gaps = 11/199 (5%)
Query: 1 MSMRLSSTATLKTFRQIFRNGMSPPSVNIYNFRIRGFA-GAGNFESESALIVARCKEKKV 59
+S R ++ K +R++F G+ SV+ I A F S ++V+ +E +
Sbjct: 207 VSRRRGASNGYKMYREVF--GLDDVSVDEAKKMIGKIKPNATTFNS---MMVSFYREGET 261
Query: 60 REAFGLWKAMTDK-GVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMS 118
+W+ M ++ G PN+ S N +++ C M +G+ D Y +
Sbjct: 262 EMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNT 321
Query: 119 LFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERERVEKAVGILRVMA 177
+ LC E KA ++ +M ++G+ + + Y LV+ YC G+ V+ + + R M
Sbjct: 322 MIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGD---VDSGLVVYREMK 378
Query: 178 KRGLSPDAVSYTTVISGFC 196
++G D ++ ++ G C
Sbjct: 379 RKGFEADGLTIEALVEGLC 397
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 104 MNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGE 162
M +G PDE TY SLFQ+L D+A ++L+EM+ G P Y ++++Y +G
Sbjct: 541 MKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLG- 599
Query: 163 RERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+ AV + M K G+ P+ V Y ++I+GF
Sbjct: 600 --LLSDAVDLYEAMEKTGVKPNEVVYGSLINGF 630
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 11/160 (6%)
Query: 65 LWKAMTDK----GVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLF 120
+W+ + D G++ + VS N I+ C M + GLTPD TY +L
Sbjct: 160 IWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLI 219
Query: 121 QLL--CDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAK 178
L +RC + + M+++G P++ +N V + R R A +L +M K
Sbjct: 220 SALYKHERCVIGNG--LWNLMVLKGCKPNLTTFN--VRIQFLVNRRRAWDANDLLLLMPK 275
Query: 179 RGLSPDAVSYTTVISGFCYLDEPELQWRSLQG-TGRGLGP 217
+ PD+++Y VI GF P++ R G+G P
Sbjct: 276 LQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKP 315
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
++LIV KEK++ + + M + EP++V+ A+I G M
Sbjct: 893 TSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEE 952
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVV 149
+G +PD TY LC C+++ A K+LSEM+ +G++PS +
Sbjct: 953 RGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTI 995
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 64/150 (42%), Gaps = 6/150 (4%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ L+ A CK KV A L M EPN V+ N +I C
Sbjct: 221 NTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFS 276
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
G PD T + ++LC+ +A +VL + +G VV N LV YC + RV
Sbjct: 277 LGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRV 336
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+ I M ++G P+ +Y +I+G+C
Sbjct: 337 AQRFFI--EMERKGYLPNVETYNLLIAGYC 364
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 57/126 (45%), Gaps = 8/126 (6%)
Query: 48 ALIVARC------KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
++IV+ C + K+ E+ L M +G P + NAVI G C
Sbjct: 492 SIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFV 551
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M +G PD +Y L + LC + + KA+ + S M+ + + P +++ L+ +C+
Sbjct: 552 EDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM--FCLS 609
Query: 162 ERERVE 167
++ +
Sbjct: 610 QKTAIH 615
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 4/144 (2%)
Query: 54 CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDE 113
C E +V EA + + + KG + ++V+ N +++G C M RKG P+
Sbjct: 294 CNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNV 353
Query: 114 NTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGIL 173
TY L CD D A ++M + + +N L+ +G R + + IL
Sbjct: 354 ETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIG--GRTDDGLKIL 411
Query: 174 RVMAKRGLSPDA--VSYTTVISGF 195
+M A Y VI GF
Sbjct: 412 EMMQDSDTVHGARIDPYNCVIYGF 435
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 6/141 (4%)
Query: 58 KVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYM 117
++ + F L + M GV PN V N ++ LC M P++ T+
Sbjct: 197 RIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFN 252
Query: 118 SLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMA 177
L C+ + ++ +L + G P VV K++ C RV +A+ +L +
Sbjct: 253 ILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLC--NEGRVSEALEVLERVE 310
Query: 178 KRGLSPDAVSYTTVISGFCYL 198
+G D V+ T++ G+C L
Sbjct: 311 SKGGKVDVVACNTLVKGYCAL 331
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 8/137 (5%)
Query: 60 REAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSL 119
RE F + M G+ ++ + +++GL M G+ P+ Y +L
Sbjct: 166 REFFT--RKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTL 223
Query: 120 FQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKR 179
LC + +A ++SEM P+ V +N L+SAYC +++ +++ +L
Sbjct: 224 LHALCKNGKVGRARSLMSEM----KEPNDVTFNILISAYC--NEQKLIQSMVLLEKCFSL 277
Query: 180 GLSPDAVSYTTVISGFC 196
G PD V+ T V+ C
Sbjct: 278 GFVPDVVTVTKVMEVLC 294
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 92/238 (38%), Gaps = 57/238 (23%)
Query: 17 IFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEP 76
I + G+SP V +N I GF AG E + KK+ + M G P
Sbjct: 259 ISKEGISPDPVT-FNVMINGFCRAGEVE----------RAKKILDF------MKKNGCNP 301
Query: 77 NLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVL 136
N+ + +A++ G C + + GL D Y +L C E D+A K+L
Sbjct: 302 NVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLL 361
Query: 137 SEM--------------IVRGLS----------------PSVVIYNK------LVSAYCV 160
EM I+RGLS V NK L + C
Sbjct: 362 GEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCN 421
Query: 161 GERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTGR-GLGP 217
GE +EKAV L VM++RG+ P ++ ++ C E+ R L G R GL P
Sbjct: 422 GE---LEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIP 476
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 76/199 (38%), Gaps = 26/199 (13%)
Query: 19 RNGMSPPSVNIYNFR--IRGFAGAGNFESE-------------------SALIVARCKEK 57
+NG +P N+YN+ + GF G + + L+ C+
Sbjct: 296 KNGCNP---NVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNG 352
Query: 58 KVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYM 117
+ EA L M + ++ N +++GL +G+ ++ +Y
Sbjct: 353 ETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYR 412
Query: 118 SLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMA 177
+ LC E +KA K LS M RG+ P +N+LV C E E V +L
Sbjct: 413 IILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLC--ESGYTEIGVRVLIGFL 470
Query: 178 KRGLSPDAVSYTTVISGFC 196
+ GL P S+ V+ C
Sbjct: 471 RIGLIPGPKSWGAVVESIC 489
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 108 GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLS-PSVVIYNKLVSAYCVGERERV 166
GL P+ + L + C + + A+ V+ EM G+S P+ + Y+ L+ C+ R
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMD--CLFAHSRS 248
Query: 167 EKAVGILRVM-AKRGLSPDAVSYTTVISGFCYLDEPE 202
++AV + M +K G+SPD V++ +I+GFC E E
Sbjct: 249 KEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVE 285
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
Query: 59 VREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMS 118
V+EA L+ ++ +EPN+VS N +++ M RK + + TY +
Sbjct: 346 VKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNT 405
Query: 119 LFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAK 178
+ ++ E +KA ++ EM RG+ P+ + Y+ ++S + G+ ++++A + + +
Sbjct: 406 MIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIW--GKAGKLDRAATLFQKLRS 463
Query: 179 RGLSPDAVSYTTVISGF 195
G+ D V Y T+I +
Sbjct: 464 SGVEIDQVLYQTMIVAY 480
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 13/174 (7%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
P++ Y+ + G GN + + VR L++ M D G+EP++ + N +
Sbjct: 243 PTIRTYHILFKALLGRGNNS-----YINHVYMETVR---SLFRQMVDSGIEPDVFALNCL 294
Query: 85 IQGLCXXXXXXXXXXXXXXMNR-KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRG 143
++G M+ P+ TY L LC + A ++LSEM +G
Sbjct: 295 VKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKG 354
Query: 144 LSPSVVIYNKLVSAYCV-GERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
P+ YN LV+A+ + GE ++ AV L M + G D +SY T++ C
Sbjct: 355 FVPNGKSYNSLVNAFALSGE---IDDAVKCLWEMIENGRVVDFISYRTLVDESC 405
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 2/155 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N ++ S +I K K AF +++ M +G++P+++ N +I C
Sbjct: 518 NLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTV 577
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M + P T+M + + ++ +V M G P+V +N L++
Sbjct: 578 KEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLV-- 635
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
E+ ++EKAV IL M G+S + +YT ++ G+
Sbjct: 636 EKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYA 670
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 79/202 (39%), Gaps = 22/202 (10%)
Query: 14 FRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESE-------------------SALIVARC 54
F + + GM P V +YN I F G GN + +I
Sbjct: 542 FEDMVKEGMKP-DVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYA 600
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDEN 114
K +R + ++ M G P + + N +I GL M G++ +E+
Sbjct: 601 KSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEH 660
Query: 115 TYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILR 174
TY + Q + KA++ + + GL + Y L+ A C + R++ A+ + +
Sbjct: 661 TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACC--KSGRMQSALAVTK 718
Query: 175 VMAKRGLSPDAVSYTTVISGFC 196
M+ R + ++ Y +I G+
Sbjct: 719 EMSARNIPRNSFVYNILIDGWA 740
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 2/148 (1%)
Query: 48 ALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRK 107
AL+ A CK +++ A + K M+ + + N N +I G M ++
Sbjct: 699 ALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKE 758
Query: 108 GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVE 167
G+ PD +TY S + ++A + + EM G+ P++ Y L+ + E
Sbjct: 759 GVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLP--E 816
Query: 168 KAVGILRVMAKRGLSPDAVSYTTVISGF 195
KA+ M G+ PD Y +++
Sbjct: 817 KALSCYEEMKAMGIKPDKAVYHCLLTSL 844
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 74/190 (38%), Gaps = 21/190 (11%)
Query: 26 SVNIYNFRIRGFAGAGNFESES-------------------ALIVARCKEKKVREAFGLW 66
S+ Y+ + GF+ AG+ E+ +I A C+ + A L
Sbjct: 378 SLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALV 437
Query: 67 KAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDR 126
+ M ++G++ + + ++ G + G TP TY L L
Sbjct: 438 REMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKV 497
Query: 127 CEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAV 186
+ KA +V M G+ ++ Y+ +++ + + + A + M K G+ PD +
Sbjct: 498 GKISKALEVSRVMKEEGVKHNLKTYSMMINGFV--KLKDWANAFAVFEDMVKEGMKPDVI 555
Query: 187 SYTTVISGFC 196
Y +IS FC
Sbjct: 556 LYNNIISAFC 565
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 73/177 (41%), Gaps = 18/177 (10%)
Query: 55 KEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGL--TPD 112
+E V+EA + M + +P++ + N +I LC M G PD
Sbjct: 177 EEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPD 236
Query: 113 ENTYMSLFQLLCD-----------RCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
TY L C R +A ++ EM+ RG P VV YN L+ C
Sbjct: 237 TYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCC-- 294
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPE---LQWRSLQGTGRGL 215
+ R+ +A+ + M +G P+ V+Y + I + +E E R+++ G G+
Sbjct: 295 KTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGV 351
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 4/174 (2%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
+I + C+ ++ A + M KG++P S NA+I GLC +
Sbjct: 313 MIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFE 372
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEK 168
P E TY L + LC + KA VL M+ + + IYN + CV + +
Sbjct: 373 FFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNP--TE 430
Query: 169 AVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQG--TGRGLGPPIV 220
+ +L M + PD + TVI+G C + + + L TG+ P V
Sbjct: 431 ILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAV 484
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 4/148 (2%)
Query: 61 EAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLF 120
EA + + +G P+ ++ ++VI LC G PDE T +
Sbjct: 73 EALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVII 132
Query: 121 QLLCDRCEADKAYKVLSEMI--VRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAK 178
L V+ +I + PS+ YN+L++ C RV A ++ M
Sbjct: 133 ARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCT--IYRVIDAHKLVFDMRN 190
Query: 179 RGLSPDAVSYTTVISGFCYLDEPELQWR 206
RG PD V++TT+I G+C + E E+ +
Sbjct: 191 RGHLPDVVTFTTLIGGYCEIRELEVAHK 218
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 4/149 (2%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
L+ + CKE +A + + M K N ++GLC M +
Sbjct: 383 LMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGD 442
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIV-RGLSPSVVIYNKLVSAYCVGERERVE 167
PDE T ++ LC D A KVL +M+ + +P V N ++ + R E
Sbjct: 443 CRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLA--QGRAE 500
Query: 168 KAVGIL-RVMAKRGLSPDAVSYTTVISGF 195
+A+ +L RVM + + P V+Y VI G
Sbjct: 501 EALDVLNRVMPENKIKPGVVAYNAVIRGL 529
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 84/215 (39%), Gaps = 28/215 (13%)
Query: 5 LSSTATLKTFRQIFRNGMSP------------PSVNIYNFRIRGFAGAGNFESESALIVA 52
+S + F+++ N + P P IY ++G+ G + ++ A
Sbjct: 380 VSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEA 439
Query: 53 RCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPD 112
++ D+ P+ V+ V+ M R G+ +
Sbjct: 440 MRRQD-------------DRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPAN 486
Query: 113 ENTYMSLFQLLCDRCEADKAYKVLSEMIVR-GLSPSVVIYNKLVSAYCVGERERVEKAVG 171
TY L + C + + D+A +L EM G+ P VV YN ++ C+ + A+
Sbjct: 487 RITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDG-CILIDDSA-GALA 544
Query: 172 ILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWR 206
M RG++P +SYTT++ F +P+L R
Sbjct: 545 FFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANR 579
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Query: 64 GLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLL 123
+++AM +G++PN+VS NA++ + + G+ PD +Y L
Sbjct: 209 AVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSY 268
Query: 124 CDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSP 183
+ KA +V M P+VV YN L+ AY G + +AV I R M + G+ P
Sbjct: 269 GRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY--GSNGFLAEAVEIFRQMEQDGIKP 326
Query: 184 DAVSYTTVISG 194
+ VS T+++
Sbjct: 327 NVVSVCTLLAA 337
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 76/214 (35%), Gaps = 55/214 (25%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
PS + YN I +GN+ REA + K MTD GV P+LV+ N V
Sbjct: 79 PSRSTYNNLINACGSSGNW----------------REALEVCKKMTDNGVGPDLVTHNIV 122
Query: 85 IQGLCXXXXXXXXXXXXXXMN-------------------------------------RK 107
+ M R
Sbjct: 123 LSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRA 182
Query: 108 GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVE 167
PD T+ S+ L + E + V M+ GL P++V YN L+ AY V
Sbjct: 183 ECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGT- 241
Query: 168 KAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEP 201
A+ +L + + G+ PD VSYT +++ + +P
Sbjct: 242 -ALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP 274
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Query: 64 GLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLL 123
+++AM +G++PN+VS NA++ + + G+ PD +Y L
Sbjct: 341 AVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSY 400
Query: 124 CDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSP 183
+ KA +V M P+VV YN L+ AY G + +AV I R M + G+ P
Sbjct: 401 GRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY--GSNGFLAEAVEIFRQMEQDGIKP 458
Query: 184 DAVSYTTVISG 194
+ VS T+++
Sbjct: 459 NVVSVCTLLAA 469
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 76/214 (35%), Gaps = 55/214 (25%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
PS + YN I +GN+ REA + K MTD GV P+LV+ N V
Sbjct: 211 PSRSTYNNLINACGSSGNW----------------REALEVCKKMTDNGVGPDLVTHNIV 254
Query: 85 IQGLCXXXXXXXXXXXXXXMN-------------------------------------RK 107
+ M R
Sbjct: 255 LSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRA 314
Query: 108 GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVE 167
PD T+ S+ L + E + V M+ GL P++V YN L+ AY V
Sbjct: 315 ECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGT- 373
Query: 168 KAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEP 201
A+ +L + + G+ PD VSYT +++ + +P
Sbjct: 374 -ALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP 406
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 11/179 (6%)
Query: 45 SESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXM 104
S S++I K + + L+ M + +EP+ NAV+ L M
Sbjct: 304 SYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTM 363
Query: 105 NR-KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGER 163
KG+ P+ TY SL + LC + ++A +V EM+ +GL P++ Y+ + G
Sbjct: 364 EEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTG-- 421
Query: 164 ERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCY---LDEPELQWRSLQGTGRGLGPPI 219
E+ +L M K G P +Y +I C D L W ++ + +GP +
Sbjct: 422 ---EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMK--EKTVGPDL 475
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 2/153 (1%)
Query: 44 ESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXX 103
S +ALI A +A+ ++ M +G++P++ + +V+
Sbjct: 486 HSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKL 545
Query: 104 MNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGER 163
M R+ + TY +L + +A V+SE GL PSV+ YN L++AY G +
Sbjct: 546 MLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQ 605
Query: 164 ERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+ K +L+ MA L PD+++Y+T+I F
Sbjct: 606 D--AKLPQLLKEMAALNLKPDSITYSTMIYAFV 636
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 60/150 (40%), Gaps = 3/150 (2%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ L+ A K + E GL+ M DKG++P+ + N ++ M
Sbjct: 383 NTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMED 442
Query: 107 KGLTPDENTYMSLFQLLC-DRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERER 165
GL P+ +Y L + +D A M GL PS Y L+ AY V
Sbjct: 443 LGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWH- 501
Query: 166 VEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
EKA M K G+ P +YT+V+ F
Sbjct: 502 -EKAYASFEEMCKEGIKPSVETYTSVLDAF 530
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Query: 57 KKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTY 116
+ +E + +++ M++KGV+ + +++ C M +KG+ + Y
Sbjct: 323 RSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVY 382
Query: 117 MSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVM 176
+L ++ + +EM +GL PS YN L+ AY R + + +LR M
Sbjct: 383 NTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAY--ARRMQPDIVETLLREM 440
Query: 177 AKRGLSPDAVSYTTVISGF 195
GL P+ SYT +IS +
Sbjct: 441 EDLGLEPNVKSYTCLISAY 459
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 78/179 (43%), Gaps = 19/179 (10%)
Query: 26 SVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVI 85
V +YN I G + + ++ +A+ +++AM V P+ V+ +I
Sbjct: 272 DVRLYNAAISGLSASQRYD----------------DAWEVYEAMDKINVYPDNVTCAILI 315
Query: 86 QGLCXX-XXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
L M+ KG+ ++ + L + CD ++A + +EM +G+
Sbjct: 316 TTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGI 375
Query: 145 SPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPEL 203
+ ++YN L+ AY + +E+ G+ M +GL P A +Y ++ + +P++
Sbjct: 376 RSNTIVYNTLMDAY--NKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDI 432
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 2/112 (1%)
Query: 52 ARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTP 111
A+C E V EA ++K M G EPN + + +++G+C M KG+ P
Sbjct: 234 AKCLE--VDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVP 291
Query: 112 DENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGER 163
+ + YM L L D+A +V+ +M+ LSP ++ YN +++ C G R
Sbjct: 292 NGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGR 343
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 12/166 (7%)
Query: 30 YNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLC 89
YN I GF G+ ++ +L KE K R + + P++ + N++I LC
Sbjct: 251 YNICIHGFGCWGDLDAALSLF----KEMKERSS------VYGSSFGPDICTYNSLIHVLC 300
Query: 90 XXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVV 149
+ G PD +TY L Q C D A ++ EM G P +
Sbjct: 301 LFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTI 360
Query: 150 IYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+YN L+ + +V +A + M + G+ +Y +I G
Sbjct: 361 VYNCLLDGTL--KARKVTEACQLFEKMVQEGVRASCWTYNILIDGL 404
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 78/187 (41%), Gaps = 23/187 (12%)
Query: 12 KTFRQIFRNGMSP--PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAM 69
+ F + SP P +Y+ I + AGN+E K R+ F +M
Sbjct: 230 EVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE-------------KARKVFS---SM 273
Query: 70 TDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEA 129
KGV + V+ N++ + M R + PD +Y L +
Sbjct: 274 VGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARRE 330
Query: 130 DKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYT 189
++A V EM+ G+ P+ YN L+ A+ + VE+A + + M + + PD SYT
Sbjct: 331 EEALSVFEEMLDAGVRPTHKAYNILLDAFAIS--GMVEQAKTVFKSMRRDRIFPDLWSYT 388
Query: 190 TVISGFC 196
T++S +
Sbjct: 389 TMLSAYV 395
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 76/198 (38%), Gaps = 21/198 (10%)
Query: 1 MSMRLSSTATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVR 60
MS S K + Q+ R+ + P V S + LI A + ++
Sbjct: 289 MSFETSYKEVSKIYDQMQRSDIQPDVV-----------------SYALLIKAYGRARREE 331
Query: 61 EAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLF 120
EA +++ M D GV P + N ++ M R + PD +Y ++
Sbjct: 332 EALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTML 391
Query: 121 QLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRG 180
+ + + A K + V G P++V Y L+ Y + VEK + + M G
Sbjct: 392 SAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYA--KANDVEKMMEVYEKMRLSG 449
Query: 181 LSPDAVSYTTVI--SGFC 196
+ + TT++ SG C
Sbjct: 450 IKANQTILTTIMDASGRC 467
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 5/144 (3%)
Query: 54 CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDE 113
C+E +VR+ + M + VE NLV N++I G M + D
Sbjct: 271 CREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADV 330
Query: 114 NTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERERVEKAVGI 172
TY ++ +KA +V EM+ G+ P Y+ L Y E ++ E+ +
Sbjct: 331 ITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLET 390
Query: 173 LRVMAKRGLSPDAVSYTTVISGFC 196
L V ++ P+ V +TTVISG+C
Sbjct: 391 LIVESR----PNVVIFTTVISGWC 410
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 77/161 (47%), Gaps = 7/161 (4%)
Query: 45 SESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXM 104
S + L+ A +K+ + + G + + + NAVI M
Sbjct: 82 SYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKM 141
Query: 105 NRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRG---LSPSVVIYNKLVSAYCVG 161
GL P +TY +L + + +++ ++L M+ G + P++ +N LV A+C
Sbjct: 142 KELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWC-- 199
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPE 202
++++VE+A +++ M + G+ PD V+Y T+ + CY+ + E
Sbjct: 200 KKKKVEEAWEVVKKMEECGVRPDTVTYNTIAT--CYVQKGE 238
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 78/187 (41%), Gaps = 23/187 (12%)
Query: 12 KTFRQIFRNGMSP--PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAM 69
+ F + SP P +Y+ I + AGN+E K R+ F +M
Sbjct: 237 EVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE-------------KARKVFS---SM 280
Query: 70 TDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEA 129
KGV + V+ N++ + M R + PD +Y L +
Sbjct: 281 VGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARRE 337
Query: 130 DKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYT 189
++A V EM+ G+ P+ YN L+ A+ + VE+A + + M + + PD SYT
Sbjct: 338 EEALSVFEEMLDAGVRPTHKAYNILLDAFAIS--GMVEQAKTVFKSMRRDRIFPDLWSYT 395
Query: 190 TVISGFC 196
T++S +
Sbjct: 396 TMLSAYV 402
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 76/198 (38%), Gaps = 21/198 (10%)
Query: 1 MSMRLSSTATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVR 60
MS S K + Q+ R+ + P V S + LI A + ++
Sbjct: 296 MSFETSYKEVSKIYDQMQRSDIQPDVV-----------------SYALLIKAYGRARREE 338
Query: 61 EAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLF 120
EA +++ M D GV P + N ++ M R + PD +Y ++
Sbjct: 339 EALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTML 398
Query: 121 QLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRG 180
+ + + A K + V G P++V Y L+ Y + VEK + + M G
Sbjct: 399 SAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYA--KANDVEKMMEVYEKMRLSG 456
Query: 181 LSPDAVSYTTVI--SGFC 196
+ + TT++ SG C
Sbjct: 457 IKANQTILTTIMDASGRC 474
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 2/129 (1%)
Query: 67 KAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDR 126
+ M +G+ P+ + N +++ + KG PDE+TY L + +
Sbjct: 398 EVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEG 457
Query: 127 CEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAV 186
+ D+A K+ EM R +SP ++ L+ C +VE L++M KR + P+A
Sbjct: 458 NDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTC--GKVEAGEKYLKIMKKRLIEPNAD 515
Query: 187 SYTTVISGF 195
Y +I F
Sbjct: 516 IYDALIKAF 524
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 11/185 (5%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDK-GVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMN 105
+AL+ A KK G++K + K +EP++ S N +I+GLC +
Sbjct: 145 NALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIE 204
Query: 106 RKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERER 165
KGL PD T+ L + + ++ ++ + M+ + + + YN + + +
Sbjct: 205 NKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAM--ENK 262
Query: 166 VEKAVGILRVMAKRGLSPDAVSYTTVISGFC---YLDEPELQWRSLQGTGRGLGPPIVLK 222
E+ V + + L PD ++T +I GF LDE ++ ++ G P LK
Sbjct: 263 SEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKN--GCRP---LK 317
Query: 223 FFFTS 227
F F S
Sbjct: 318 FVFNS 322
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 70/161 (43%), Gaps = 6/161 (3%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N +S S +I K + ++ L+ M +G+ P + N+++ L
Sbjct: 293 NKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLM 352
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
+N +GL PD TY S+ + LC+ + D A VL+ MI LSP+V ++ + A
Sbjct: 353 KKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAV--- 409
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPE 202
EK + +L M L P ++ ++ +PE
Sbjct: 410 ---NFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPE 447
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 71/155 (45%), Gaps = 6/155 (3%)
Query: 44 ESESALIVARCKEKKVREAFGLWKAMTDKGVEP-NLVSSNAVIQGLCXXXXXXXXXXXX- 101
E+ L+ A C+ + +A + K + P ++ N ++ G C
Sbjct: 225 EAFQGLLCALCRHGHIEKAEEF--MLASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIW 282
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M +TP++++Y + + ++ EM RGL+P + +YN LV Y +
Sbjct: 283 REMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLV--YVLT 340
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
+ ++A+ +++ + + GL PD+V+Y ++I C
Sbjct: 341 REDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLC 375
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 86/209 (41%), Gaps = 2/209 (0%)
Query: 1 MSMRLSSTATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVR 60
+S+ +S Q +NG +V ++N + + ++L+ A C K
Sbjct: 140 LSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFH 199
Query: 61 EAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLF 120
A+ L + M KG++P+ + ++ G C M+R+G P L
Sbjct: 200 GAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLI 259
Query: 121 QLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRG 180
+ L + + A +++S+M G P + +N L+ A + + VE + + K G
Sbjct: 260 EGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEA--ISKSGEVEFCIEMYYTACKLG 317
Query: 181 LSPDAVSYTTVISGFCYLDEPELQWRSLQ 209
L D +Y T+I + + + +R L
Sbjct: 318 LCVDIDTYKTLIPAVSKIGKIDEAFRLLN 346
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 2/144 (1%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
+I CK K+VR+A + M + + L N++++ + G
Sbjct: 898 MIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETG 957
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEK 168
L PDE TY +L + C ++ Y ++ +M GL P + Y L+SA+ G+++ +E+
Sbjct: 958 LEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAF--GKQKCLEQ 1015
Query: 169 AVGILRVMAKRGLSPDAVSYTTVI 192
A + + +GL D Y T++
Sbjct: 1016 AEQLFEELLSKGLKLDRSFYHTMM 1039
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 66/171 (38%), Gaps = 20/171 (11%)
Query: 27 VNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQ 86
V +YN + ++ +G F L+ AM +G P+L+S N +I
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELV----------------DAMRQRGCVPDLISFNTLIN 268
Query: 87 G-LCXXXXXXXXXXXXXXMNRK-GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
L M R GL PD TY +L D A KV +M
Sbjct: 269 ARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRC 328
Query: 145 SPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
P + YN ++S Y G +A + + +G PDAV+Y +++ F
Sbjct: 329 QPDLWTYNAMISVY--GRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAF 377
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 4/152 (2%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ LI + K + EA L M D G++P L + +A+I G M R
Sbjct: 442 TVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLR 501
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGER-ER 165
G PD Y + +L E KA+ + +MI G +PS +Y ++ R +
Sbjct: 502 SGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDD 561
Query: 166 VEKAVGILRVMAKRGLSPDAVSYTTVISGFCY 197
++K + + + G++P +S + ++ G C+
Sbjct: 562 IQKTIRDMEELC--GMNPLEIS-SVLVKGECF 590
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
+I A C +K++ EA +++ +++KG +PN+V+ N++++ LC M KG
Sbjct: 323 VIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKG 382
Query: 109 --LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
+P++ T+ L + + D VL M + +YN + Y ++E
Sbjct: 383 GSCSPNDVTFSYLLKYSQRSKDVDI---VLERMAKNKCEMTSDLYNLMFRLYVQWDKE-- 437
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGF 195
EK I M + GL PD +YT I G
Sbjct: 438 EKVREIWSEMERSGLGPDQRTYTIRIHGL 466
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 71/170 (41%), Gaps = 33/170 (19%)
Query: 59 VREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMS 118
+ EA+ + + M + G+EP++ + N++I G M GL+PD +Y +
Sbjct: 64 IDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNT 123
Query: 119 LFQLLCDRCEADKAYKVLSEMI-VRGLSPSVVIYNKLVSAYC------------------ 159
L +A+K+L E I + GL P + YN L+ A C
Sbjct: 124 LMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR 183
Query: 160 --------------VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+ + RV ++R + K G +P+AV+YTT++ +
Sbjct: 184 VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMY 233
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 3/144 (2%)
Query: 54 CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDE 113
CK + + A L GV P++++ N +I+G M G+ PD
Sbjct: 24 CKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDV 83
Query: 114 NTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGIL 173
TY SL ++ ++ EM+ GLSP + YN L+S C + R +A IL
Sbjct: 84 TTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMS--CYFKLGRHGEAFKIL 141
Query: 174 RV-MAKRGLSPDAVSYTTVISGFC 196
+ GL P +Y ++ C
Sbjct: 142 HEDIHLAGLVPGIDTYNILLDALC 165
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 69/173 (39%), Gaps = 18/173 (10%)
Query: 23 SPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSN 82
S P++ YN ++ F AG+ S ++ K M +GV+P + N
Sbjct: 351 SGPTIVTYNSLVKNFCKAGDLPGASKIL----------------KMMMTRGVDPTTTTYN 394
Query: 83 AVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVR 142
+ + G +PD TY + ++LC+ + A +V EM R
Sbjct: 395 HFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNR 454
Query: 143 GLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
G+ P ++ L+ C E +E+A +RG+ P +++ + +G
Sbjct: 455 GIDPDLLTTTMLIHLLC--RLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGL 505
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 76/180 (42%), Gaps = 3/180 (1%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
NF + +I + ++ EA G+ + P +V+ N++++ C
Sbjct: 319 NFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKIL 378
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
M +G+ P TY F+ + ++ + ++I G SP + Y+ ++ C
Sbjct: 379 KMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLC-- 436
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQ-GTGRGLGPPIV 220
E ++ A+ + + M RG+ PD ++ T +I C L+ E + RG+ P +
Sbjct: 437 EDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYI 496
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 72/179 (40%), Gaps = 20/179 (11%)
Query: 25 PSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAV 84
PSV I+N + G+ + +K+++A LW+ M V+P +V+ +
Sbjct: 248 PSVRIFNILLNGW----------------FRSRKLKQAEKLWEEMKAMNVKPTVVTYGTL 291
Query: 85 IQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGL 144
I+G C M + + + + L + +A ++ V
Sbjct: 292 IEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCES 351
Query: 145 SPSVVIYNKLVSAYC-VGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPE 202
P++V YN LV +C G+ + A IL++M RG+ P +Y F ++ E
Sbjct: 352 GPTIVTYNSLVKNFCKAGD---LPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTE 407
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 66/161 (40%), Gaps = 1/161 (0%)
Query: 58 KVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYM 117
KV +A L++ M G P + + +I+GL M R GLTPD
Sbjct: 283 KVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLN 342
Query: 118 SLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMA 177
+L +L ++ V SEM + +P+VV YN ++ A + V + M
Sbjct: 343 NLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKA-LFESKAHVSEVSSWFDKMK 401
Query: 178 KRGLSPDAVSYTTVISGFCYLDEPELQWRSLQGTGRGLGPP 218
+SP +Y+ +I G+C + E L+ PP
Sbjct: 402 ADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPP 442
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 5/165 (3%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+ +I A K +A L+++M GV P+ + N ++Q L M
Sbjct: 509 NVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRE 568
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
G D Y ++ + + A +V EM+ + P VV+Y L++A+ + V
Sbjct: 569 TGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAF--ADTGNV 626
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFC---YLDEPELQWRSL 208
++A+ + M + G+ ++V Y ++I + YLDE E +R L
Sbjct: 627 QQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKL 671
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 8/157 (5%)
Query: 29 IYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGL 88
+ R GF + A K+ + EA L+ + DK P++V+ A+++
Sbjct: 188 FHKMRTEGFTNEA-----VKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAY 242
Query: 89 CXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQ-LLCDRCEADKAYKVLSEMIVRGLSPS 147
M G++P+ TY L + L D A K L EM+ G+SP+
Sbjct: 243 ANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPN 302
Query: 148 VVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPD 184
Y + A+ +E E A +L+ M +G PD
Sbjct: 303 AATYTAVFEAFVREGKE--ESARELLQEMKGKGFVPD 337
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 74/170 (43%), Gaps = 3/170 (1%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+A++VA K + A ++KAM D G +P ++S A++ L M +
Sbjct: 462 NAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIK 521
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
G+ P+ Y ++ +L + + + +L EM +G+ PSVV +N ++S V
Sbjct: 522 VGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGV 581
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWR-SLQGTGRGL 215
A M + P+ ++Y +I +P L + ++ GL
Sbjct: 582 --AYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGL 629
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 73/162 (45%), Gaps = 4/162 (2%)
Query: 35 RGFAGAGNFESE--SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXX 92
R F+GA + + SA+I + + V +A GL+K M + VEPN+ + N+++
Sbjct: 375 RVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALA 434
Query: 93 XXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYN 152
+ + G + L + + A+K+ + + + S VV++
Sbjct: 435 DLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWG 494
Query: 153 KLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISG 194
L+S Y G A+ + M + G++P+ +++T+ ++
Sbjct: 495 ALISGY--GMHGDGHNALQVFMEMVRSGVTPNEITFTSALNA 534
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 125 DRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPD 184
+ +AD+A ++ +M + G+ P V+ +N L+S + E EK IL +M G PD
Sbjct: 195 NNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNE--EKVSEILELMCLDGYKPD 252
Query: 185 AVSYTTVISGFCYLDEPELQWRSL-QGTGRGLGP 217
VS+T++ISG + + E + + Q GL P
Sbjct: 253 VVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYP 286
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 77/161 (47%), Gaps = 7/161 (4%)
Query: 45 SESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXM 104
S + L+ A +K+ + + G + + + NAVI M
Sbjct: 82 SYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKM 141
Query: 105 NRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRG---LSPSVVIYNKLVSAYCVG 161
GL P +TY +L + + +++ ++L M+ G + P++ +N LV A+C
Sbjct: 142 KELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWC-- 199
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPE 202
++++VE+A +++ M + G+ PD V+Y T+ + CY+ + E
Sbjct: 200 KKKKVEEAWEVVKKMEECGVRPDTVTYNTIAT--CYVQKGE 238
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 20/153 (13%)
Query: 54 CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDE 113
C+E +VR+ + M + VE NLV N++I G M+R G+ DE
Sbjct: 271 CREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEV------------MDRDGI--DE 316
Query: 114 NTYMSLFQLLCDRCE----ADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKA 169
T L + E +VL+ M + V+ Y+ +++A+ +EKA
Sbjct: 317 VTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAW--SSAGYMEKA 374
Query: 170 VGILRVMAKRGLSPDAVSYTTVISGFCYLDEPE 202
+ + M K G+ PDA +Y+ + G+ EP+
Sbjct: 375 AQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPK 407
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 9/153 (5%)
Query: 47 SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
+A+I A C V+ A G+ D L +++ G M
Sbjct: 177 TAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKS 236
Query: 107 KGLTPDENTYMSLFQLLCDRCE-------ADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC 159
G+TPD + SL LC+R +A ++ EM + P+ + YN L+S C
Sbjct: 237 AGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLS--C 294
Query: 160 VGERERVEKAVGILRVMAKRGLSPDAVSYTTVI 192
+G RV ++ IL M + G PD SY V+
Sbjct: 295 LGRTRRVRESCQILEQMKRSGCDPDTGSYYFVV 327
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 9/169 (5%)
Query: 45 SESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXM 104
S +++IVA + K+ +A L+K M KG + ++ + +V+ L +
Sbjct: 207 SWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKL 266
Query: 105 NRKGLTPDENTYMSL--FQLLCDRCEA-DKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
+ G + + L F C C+ + KV E+ LSP +V++N ++S Y +
Sbjct: 267 IKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI----LSPDLVVWNTMISGYSMN 322
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPELQWRSLQG 210
E E E+AV R M + G PD S+ V S L P Q + + G
Sbjct: 323 E-ELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPS-QCKQIHG 369
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 9/176 (5%)
Query: 28 NIYNFRIRGFAGAGNFE------SESALIVARCKEKKVREAFGLWKAMTDK-GVEPNLVS 80
N+ + I+ F +E S +AL+ A K +EA ++ M G+EP+L +
Sbjct: 125 NMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLET 184
Query: 81 SNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMI 140
N +I+ LC M RK + P ++ + + D+ KV+ M
Sbjct: 185 YNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMD 244
Query: 141 VRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGFC 196
G+ V YN ++ C ++ KA+ I VM+ R + P++V+Y+ +I GFC
Sbjct: 245 EFGVHVGVATYNIMIQCLCKRKKSAEAKAL-IDGVMSCR-MRPNSVTYSLLIHGFC 298
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 8/156 (5%)
Query: 48 ALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRK 107
+LI EKK+ +A ++ G + NA++ C M K
Sbjct: 307 SLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLK 366
Query: 108 GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVE 167
G+ P+ TY + L + +AY+V M P+V Y +V +C +ER++
Sbjct: 367 GVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFC--NKERLD 421
Query: 168 KAVGILRVMAKRGLSPDAVSYTTVISGFCY---LDE 200
A+ I M +G+ P ++++I+ C+ LDE
Sbjct: 422 MAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDE 457
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 3/149 (2%)
Query: 48 ALIVAR-CKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
ALI R + +KV+EA G + M + G + N ++ L M +
Sbjct: 166 ALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKK 225
Query: 107 KGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERV 166
K PD +Y L + + +V EM G P VV Y +++A+C ++
Sbjct: 226 KRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKA--KKY 283
Query: 167 EKAVGILRVMAKRGLSPDAVSYTTVISGF 195
E+A+ M +R P + ++I+G
Sbjct: 284 EEAIRFFNEMEQRNCKPSPHIFCSLINGL 312
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 4/152 (2%)
Query: 48 ALIVARCKEKKVREAFGLW-KAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
A + A C+ K++EA + K M P + N +I+GLC M++
Sbjct: 338 AKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSK 397
Query: 107 K-GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERER 165
+ +E TY +L LC + +A +V+ EM+++ P V Y+ ++ C + +R
Sbjct: 398 QVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLC--DMDR 455
Query: 166 VEKAVGILRVMAKRGLSPDAVSYTTVISGFCY 197
+AV L M + + P++ + + C+
Sbjct: 456 RYEAVMWLEEMVSQDMVPESSVWKALAESVCF 487
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 4/152 (2%)
Query: 48 ALIVARCKEKKVREAFGLW-KAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNR 106
A + A C+ K++EA + K M P + N +I+GLC M++
Sbjct: 338 AKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSK 397
Query: 107 K-GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERER 165
+ +E TY +L LC + +A +V+ EM+++ P V Y+ ++ C + +R
Sbjct: 398 QVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLC--DMDR 455
Query: 166 VEKAVGILRVMAKRGLSPDAVSYTTVISGFCY 197
+AV L M + + P++ + + C+
Sbjct: 456 RYEAVMWLEEMVSQDMVPESSVWKALAESVCF 487
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 66/149 (44%), Gaps = 3/149 (2%)
Query: 49 LIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKG 108
LI + C +A + + M KG+E ++ ++ L M +KG
Sbjct: 180 LIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKG 239
Query: 109 LTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEK 168
D Y ++ + + ++ +++ EM GL P + YN L++AYC ER +++
Sbjct: 240 CELDNAAY-NVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYC--ERGMLDE 296
Query: 169 AVGILRVMAKRGLSPDAVSYTTVISGFCY 197
A + + +P+A ++ T+I CY
Sbjct: 297 AKKVYEGLEGNNCAPNAATFRTLIFHLCY 325
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 23/206 (11%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMT 70
++TF Q+ + G +P S +N + + NF+ KV + F
Sbjct: 122 MRTFEQMDQYG-TPRSAVSFNALLNACLHSKNFD-------------KVPQLFDEIPQRY 167
Query: 71 DKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEAD 130
+K + P+ +S +I+ C M KG+ + ++ L + E +
Sbjct: 168 NKII-PDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELE 226
Query: 131 KAYKVLSEMIVRGLSPSVVIYN-KLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYT 189
A + +EM+ +G YN +++SA ++E E+ ++ M+ GL PD +SY
Sbjct: 227 VADNLWNEMVKKGCELDNAAYNVRIMSA----QKESPERVKELIEEMSSMGLKPDTISYN 282
Query: 190 TVISGFC---YLDEPELQWRSLQGTG 212
+++ +C LDE + + L+G
Sbjct: 283 YLMTAYCERGMLDEAKKVYEGLEGNN 308
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 78/208 (37%), Gaps = 20/208 (9%)
Query: 8 TATLKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWK 67
TAT + ++ + G P SV Y RI GF CK++ EA L++
Sbjct: 227 TATELFYHEMVKRGFKPNSVT-YGIRIDGF----------------CKKRNFGEALRLFE 269
Query: 68 AMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRC 127
M + + +I G ++++GLTPD Y +L L
Sbjct: 270 DMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCG 329
Query: 128 EADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVS 187
+ A KV+ EM +G+ P V ++ + + + M +R L P +
Sbjct: 330 DVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPT 389
Query: 188 YTTVISGFCYLDEPEL---QWRSLQGTG 212
++ FC+ E L W+ + G
Sbjct: 390 IVMLMKLFCHNGEVNLGLDLWKYMLEKG 417
>AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=550
Length = 550
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 17/170 (10%)
Query: 14 FRQIF--RNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTD 71
FR + RN P++ Y+ + G GN + L + + L++ M D
Sbjct: 165 FRHMVNSRNLECRPTMRTYHILFKALLGRGNNSFINHLYMETVR--------SLFRQMVD 216
Query: 72 KGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADK 131
G+EP++ + N +++G M KG P+ +Y SL E D
Sbjct: 217 SGIEPDVFALNCLVKG-----RTINTRELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDD 271
Query: 132 AYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGL 181
A K L EMI G + Y LV C + + ++A +L ++ ++ L
Sbjct: 272 AVKCLWEMIENGRVVDFISYRTLVDESC--RKGKYDEATRLLEMLREKQL 319
>AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=575
Length = 575
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 17/170 (10%)
Query: 14 FRQIF--RNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTD 71
FR + RN P++ Y+ + G GN + L + + L++ M D
Sbjct: 190 FRHMVNSRNLECRPTMRTYHILFKALLGRGNNSFINHLYMETVR--------SLFRQMVD 241
Query: 72 KGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADK 131
G+EP++ + N +++G M KG P+ +Y SL E D
Sbjct: 242 SGIEPDVFALNCLVKG-----RTINTRELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDD 296
Query: 132 AYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGL 181
A K L EMI G + Y LV C + + ++A +L ++ ++ L
Sbjct: 297 AVKCLWEMIENGRVVDFISYRTLVDESC--RKGKYDEATRLLEMLREKQL 344
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 33 RIRGFAGAGNFESE----SALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGL 88
++ G G +E S+L+ K ++V +AF +K ++ EPN VS NA+I G
Sbjct: 122 QVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEIS----EPNSVSWNALIAGF 177
Query: 89 CXXXXXXXXXXXXXXMNRK-GLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPS 147
M K +T D T+ L LL D + +V ++++ GL
Sbjct: 178 VQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHE 237
Query: 148 VVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+ I N ++S+Y + V A RV G S D +S+ ++I+GF
Sbjct: 238 ITICNAMISSY--ADCGSVSDAK---RVFDGLGGSKDLISWNSMIAGF 280
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 104 MNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGER 163
M G+ P Y +L E DKA ++ EM V+G P+V YN ++ C+
Sbjct: 715 MKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGE 774
Query: 164 ERVEKAVGILRVMAKRGLSPDAVSYTTVI 192
R +A +L+ M RG +P+ V Y+T++
Sbjct: 775 FR--EACWLLKEMESRGCNPNFVVYSTLV 801
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 62/159 (38%), Gaps = 3/159 (1%)
Query: 26 SVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVI 85
S+ +Y ++GF + +LI + K K+ A LW M G PN +I
Sbjct: 367 SMKVY-MEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMII 425
Query: 86 QGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLS 145
+ M + G P +TY L ++ + D A K+ + M GL
Sbjct: 426 ESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLR 485
Query: 146 PSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPD 184
P + Y L++ + + V+ A IL M G S D
Sbjct: 486 PGLSSYISLLT--LLANKRLVDVAGKILLEMKAMGYSVD 522
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 111 PDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAV 170
P TY LF++L + + D+A + M+ GL P++ +Y L+S Y G+ E ++KA
Sbjct: 142 PRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVY--GKSELLDKAF 199
Query: 171 GILRVMAK-RGLSPDAVSYTTVISGFCYLDEPEL 203
L M PD ++T +IS C L +L
Sbjct: 200 STLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDL 233
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 6/154 (3%)
Query: 42 NFESESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXX 101
N + SA+I A +E + RE L++ M GV P+ ++QG
Sbjct: 145 NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIH 204
Query: 102 XXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVG 161
+ + G++ S+ + E D A K M R V+ +N ++ AYC
Sbjct: 205 SVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYC-- 258
Query: 162 ERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+ + E+AV +++ M K G+SP V++ +I G+
Sbjct: 259 QNGKHEEAVELVKEMEKEGISPGLVTWNILIGGY 292
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 2/158 (1%)
Query: 45 SESALIVARCKEKKVREAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXM 104
S + +I K +V E + K M + G P+ +S + +I+GL +
Sbjct: 257 SYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNI 316
Query: 105 NRKGLTPDENTYMSLFQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERE 164
KG PD N Y ++ + D++ + M+ P++ Y+KLVS G
Sbjct: 317 KHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKG--R 374
Query: 165 RVEKAVGILRVMAKRGLSPDAVSYTTVISGFCYLDEPE 202
+V A+ I M RG+ P T+ + C P
Sbjct: 375 KVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPH 412
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 4/142 (2%)
Query: 60 REAFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSL 119
+E + M VEP+LV V+QG+ + GL PD TY
Sbjct: 268 KEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVY 327
Query: 120 FQLLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYC-VGERERVEKAVGILRVMAK 178
LC + + + A K++S M G P+VV YN L+ A G+ R A + + M
Sbjct: 328 INGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSR---AKTLWKEMET 384
Query: 179 RGLSPDAVSYTTVISGFCYLDE 200
G++ ++ ++ +IS + +DE
Sbjct: 385 NGVNRNSHTFDIMISAYIEVDE 406
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 3/161 (1%)
Query: 62 AFGLWKAMTDKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQ 121
A ++K M +K V P+ V +A+I +G+ +Y SL
Sbjct: 663 ACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMG 722
Query: 122 LLCDRCEADKAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGL 181
C+ + KA ++ ++ L P++ N L++A C G ++ KA+ L + GL
Sbjct: 723 ACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEG--NQLPKAMEYLDEIKTLGL 780
Query: 182 SPDAVSYTTVISGFCYLDEPELQWRSL-QGTGRGLGPPIVL 221
P+ ++Y+ ++ D+ E+ ++ L Q G G+ P +++
Sbjct: 781 KPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIM 821
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 72/178 (40%), Gaps = 18/178 (10%)
Query: 18 FRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMTDKGVEPN 77
F++ P++ +N + + +GN++ SA++ + M
Sbjct: 318 FQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVM----------------EYMQKYHYSWT 361
Query: 78 LVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEADKAYKVLS 137
+V+ N VI M + + P T SL + +ADK VL
Sbjct: 362 IVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLR 421
Query: 138 EMIVRGLSPSVVIYNKLVSAYCVGERERVEKAVGILRVMAKRGLSPDAVSYTTVISGF 195
+ + +V +N LV AY G E+ + G+L +M K+G PD ++Y T++ +
Sbjct: 422 FIENSDIRLDLVFFNCLVDAY--GRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAY 477
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 77/187 (41%), Gaps = 5/187 (2%)
Query: 11 LKTFRQIFRNGMSPPSVNIYNFRIRGFAGAGNFESESALIVARCKEKKVREAFGLWKAMT 70
L+ F Q+ + P + Y+ I G E ++ R ++K + L +
Sbjct: 275 LQIFNQMLGDRQLYPDMAAYHC-IAVTLGQAGLLKELLKVIERMRQKPTKLTKNLRQKNW 333
Query: 71 DKGVEPNLVSSNAVIQGLCXXXXXXXXXXXXXXMNRKGLTPDENTYMSLFQLLCDRCEAD 130
D +EP+LV NA++ + + GL P+ TY +++ + + D
Sbjct: 334 DPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFD 393
Query: 131 KAYKVLSEMIVRGLSPSVVIYNKLVSAYCVGERE-RVEKAVGILRVMAKRGLSPDAVSYT 189
+ + +M G +P + Y LV A RE ++E+AV +R M ++G+ Y
Sbjct: 394 RVHDFFRKMKSSGEAPKAITYKVLVRALW---REGKIEEAVEAVRDMEQKGVIGTGSVYY 450
Query: 190 TVISGFC 196
+ C
Sbjct: 451 ELACCLC 457