Miyakogusa Predicted Gene
- Lj0g3v0244289.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0244289.1 Non Chatacterized Hit- tr|I3SMC1|I3SMC1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,90.32,0.00000007,
,CUFF.15972.1
(66 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G25950.1 | Symbols: | Protein of unknown function (DUF1000) ... 50 4e-07
>AT2G25950.1 | Symbols: | Protein of unknown function (DUF1000) |
chr2:11068735-11070524 FORWARD LENGTH=204
Length = 204
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/31 (70%), Positives = 27/31 (87%)
Query: 12 SALNEATPGSVKSVFKAWDDRLNSSGDHLET 42
SALNE+ GS KSVFKAW+ RL+SSG+HLE+
Sbjct: 30 SALNESVSGSAKSVFKAWEQRLHSSGEHLES 60