Miyakogusa Predicted Gene

Lj0g3v0244169.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0244169.1 Non Chatacterized Hit- tr|I1LQT5|I1LQT5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.33713
PE,66.67,0.00000000000004,DUF966,Protein of unknown function
DUF966,BP034539.path1.1
         (68 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G59790.1 | Symbols:  | Domain of unknown function (DUF966) | ...    61   2e-10
AT3G46110.1 | Symbols:  | Domain of unknown function (DUF966) | ...    52   1e-07
AT3G46110.2 | Symbols:  | Domain of unknown function (DUF966) | ...    49   7e-07
AT2G28150.1 | Symbols:  | Domain of unknown function (DUF966) | ...    47   2e-06

>AT5G59790.1 | Symbols:  | Domain of unknown function (DUF966) |
           chr5:24090950-24092804 FORWARD LENGTH=423
          Length = 423

 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/46 (65%), Positives = 36/46 (78%)

Query: 2   EIPDLSRVRLEDKEYFSGSLIETQKVETPSLKRSNSYNADRYILLG 47
           E+    RV+LEDKEYFSGSLIET+K   P+LKRS+SYNADR   +G
Sbjct: 346 ELKSFGRVQLEDKEYFSGSLIETKKELVPALKRSSSYNADRCSRMG 391


>AT3G46110.1 | Symbols:  | Domain of unknown function (DUF966) |
           chr3:16932244-16933588 FORWARD LENGTH=343
          Length = 343

 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 2/50 (4%)

Query: 2   EIPDLSRVRLEDKEYFSGSLI-ETQKVE-TPSLKRSNSYNADRYILLGLI 49
           E+    RV+LE+KEYFSGSLI E+ K E  P+LKRS+SYN DR   +GL 
Sbjct: 269 ELKSFGRVKLEEKEYFSGSLIDESSKKELVPALKRSSSYNIDRSSRMGLT 318


>AT3G46110.2 | Symbols:  | Domain of unknown function (DUF966) |
           chr3:16932244-16933359 FORWARD LENGTH=311
          Length = 311

 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/43 (62%), Positives = 33/43 (76%), Gaps = 2/43 (4%)

Query: 2   EIPDLSRVRLEDKEYFSGSLI-ETQKVE-TPSLKRSNSYNADR 42
           E+    RV+LE+KEYFSGSLI E+ K E  P+LKRS+SYN DR
Sbjct: 269 ELKSFGRVKLEEKEYFSGSLIDESSKKELVPALKRSSSYNIDR 311


>AT2G28150.1 | Symbols:  | Domain of unknown function (DUF966) |
           chr2:12000015-12002227 FORWARD LENGTH=540
          Length = 540

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/47 (57%), Positives = 33/47 (70%), Gaps = 6/47 (12%)

Query: 2   EIPDLSRVRLEDKEYFSGSLIET--QKVE----TPSLKRSNSYNADR 42
           E P L  +R+E+KEYFSGSL+ET  QK +      SLKRS+SYN DR
Sbjct: 386 ETPSLMGLRMEEKEYFSGSLVETKLQKKDAADSNASLKRSSSYNGDR 432