Miyakogusa Predicted Gene

Lj0g3v0243599.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0243599.1 tr|E9CAH7|E9CAH7_CAPO3 Zinc-binding alcohol
dehydrogenase domain-containing protein 2 OS=Capsaspora
,48.21,2e-19,NAD(P)-binding Rossmann-fold domains,NULL; ZINC-BINDING
ALCOHOL DEHYDROGENASE DOMAIN-CONTAINING PROT,CUFF.15928.1
         (123 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G49670.1 | Symbols: NQR | ARP protein (REF) | chr1:18381591-1...   185   5e-48
AT1G49670.2 | Symbols: NQR | ARP protein (REF) | chr1:18381591-1...   185   6e-48

>AT1G49670.1 | Symbols: NQR | ARP protein (REF) |
           chr1:18381591-18386021 REVERSE LENGTH=629
          Length = 629

 Score =  185 bits (470), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 84/123 (68%), Positives = 101/123 (82%)

Query: 1   MFNLCLNALAVHGRLIVIGMISQYQGENGWTPLKYPGLCEKLLAKSQTVAGFFLVQYGHL 60
           MF++CLNALAV+GRLIVIGMISQYQGE GW P KYPGLCEK+LAKSQTVAGFFLVQY  L
Sbjct: 507 MFDMCLNALAVYGRLIVIGMISQYQGEKGWEPAKYPGLCEKILAKSQTVAGFFLVQYSQL 566

Query: 61  WQEHLDRLFNLYSMGKLKVVVDPKKFIGLHSVADAVEHLHXXXXXXXXXXXXDPAFLPQV 120
           W+++LD+LFNLY++GKLKV +D KKFIGL++VADAVE+LH            DPAF  + 
Sbjct: 567 WKQNLDKLFNLYALGKLKVGIDQKKFIGLNAVADAVEYLHSGKSTGKVVVCIDPAFEQKT 626

Query: 121 AKL 123
           ++L
Sbjct: 627 SRL 629


>AT1G49670.2 | Symbols: NQR | ARP protein (REF) |
           chr1:18381591-18386021 REVERSE LENGTH=652
          Length = 652

 Score =  185 bits (469), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 84/123 (68%), Positives = 101/123 (82%)

Query: 1   MFNLCLNALAVHGRLIVIGMISQYQGENGWTPLKYPGLCEKLLAKSQTVAGFFLVQYGHL 60
           MF++CLNALAV+GRLIVIGMISQYQGE GW P KYPGLCEK+LAKSQTVAGFFLVQY  L
Sbjct: 530 MFDMCLNALAVYGRLIVIGMISQYQGEKGWEPAKYPGLCEKILAKSQTVAGFFLVQYSQL 589

Query: 61  WQEHLDRLFNLYSMGKLKVVVDPKKFIGLHSVADAVEHLHXXXXXXXXXXXXDPAFLPQV 120
           W+++LD+LFNLY++GKLKV +D KKFIGL++VADAVE+LH            DPAF  + 
Sbjct: 590 WKQNLDKLFNLYALGKLKVGIDQKKFIGLNAVADAVEYLHSGKSTGKVVVCIDPAFEQKT 649

Query: 121 AKL 123
           ++L
Sbjct: 650 SRL 652