Miyakogusa Predicted Gene
- Lj0g3v0243569.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0243569.1 Non Chatacterized Hit- tr|I3S0V6|I3S0V6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,seg,NULL;
no description,NULL; S-adenosyl-L-methionine-dependent
methyltransferases,NULL,NODE_58507_length_1221_cov_65.426697.path1.1
(260 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G49720.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 337 3e-93
AT3G49720.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 337 3e-93
AT5G65810.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 331 3e-91
>AT3G49720.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid membrane, Golgi apparatus, plasma membrane,
membrane; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G65810.1);
Has 64 Blast hits to 64 proteins in 11 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr3:18440192-18441655 REVERSE LENGTH=261
Length = 261
Score = 337 bits (865), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 165/258 (63%), Positives = 197/258 (76%), Gaps = 1/258 (0%)
Query: 1 MSRRQPSSTRRPGGGGTFPXXXXXXXXXXXXXXXXXXXXXXGAVFLIIYAFGGSGLFGGR 60
M+RRQ STRR G GG+FP GA LI YA+ G G+F
Sbjct: 1 MARRQVGSTRRVGDGGSFPFAGALHSKSRSSPLLSICLVLVGACLLIGYAYSGPGIFKSI 60
Query: 61 KDGVSRVEGDFSCTSEVQSAIPVLKKAYGGNMKNVLHVGPESCSVVSKLIKEGETEAWGV 120
K+ VS+V GD+SCT+EVQ AIPVLKKAYG M+ VLHVGP++CSVVS L+KE ETEAWGV
Sbjct: 61 KE-VSKVTGDYSCTAEVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSSLLKEEETEAWGV 119
Query: 121 DPYEIEDADRNCKALMHKGIVRVADIKFPLPYREKSFSHVIVSDALDYLSPKYLNKTLPE 180
+PY+IEDAD +CK+ + KG+VRVADIKFPLPYR KSFS VIVSDALDYLSPKYLNKT+PE
Sbjct: 120 EPYDIEDADSHCKSFVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPE 179
Query: 181 LVRVSADGVVIFTGYPGQRRAKVAQLSKFGRPAKMRSSSSWKQIFAEASLEENEASVKKF 240
L RV++DGVV+F G PGQ+RAKVA+LSKFGRPAKMRS+S W + F + +LEEN+A KKF
Sbjct: 180 LARVASDGVVLFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKF 239
Query: 241 EEAASKMSYAPSCQIFHL 258
E+A SK Y P+CQ+FHL
Sbjct: 240 EQAVSKGLYKPACQVFHL 257
>AT3G49720.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid membrane, Golgi apparatus, plasma membrane,
membrane; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G65810.1);
Has 64 Blast hits to 64 proteins in 11 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr3:18440192-18441655 REVERSE LENGTH=261
Length = 261
Score = 337 bits (865), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 165/258 (63%), Positives = 197/258 (76%), Gaps = 1/258 (0%)
Query: 1 MSRRQPSSTRRPGGGGTFPXXXXXXXXXXXXXXXXXXXXXXGAVFLIIYAFGGSGLFGGR 60
M+RRQ STRR G GG+FP GA LI YA+ G G+F
Sbjct: 1 MARRQVGSTRRVGDGGSFPFAGALHSKSRSSPLLSICLVLVGACLLIGYAYSGPGIFKSI 60
Query: 61 KDGVSRVEGDFSCTSEVQSAIPVLKKAYGGNMKNVLHVGPESCSVVSKLIKEGETEAWGV 120
K+ VS+V GD+SCT+EVQ AIPVLKKAYG M+ VLHVGP++CSVVS L+KE ETEAWGV
Sbjct: 61 KE-VSKVTGDYSCTAEVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSSLLKEEETEAWGV 119
Query: 121 DPYEIEDADRNCKALMHKGIVRVADIKFPLPYREKSFSHVIVSDALDYLSPKYLNKTLPE 180
+PY+IEDAD +CK+ + KG+VRVADIKFPLPYR KSFS VIVSDALDYLSPKYLNKT+PE
Sbjct: 120 EPYDIEDADSHCKSFVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPE 179
Query: 181 LVRVSADGVVIFTGYPGQRRAKVAQLSKFGRPAKMRSSSSWKQIFAEASLEENEASVKKF 240
L RV++DGVV+F G PGQ+RAKVA+LSKFGRPAKMRS+S W + F + +LEEN+A KKF
Sbjct: 180 LARVASDGVVLFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKF 239
Query: 241 EEAASKMSYAPSCQIFHL 258
E+A SK Y P+CQ+FHL
Sbjct: 240 EQAVSKGLYKPACQVFHL 257
>AT5G65810.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G49720.2); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
0; Other Eukaryotes - 2996 (source: NCBI BLink). |
chr5:26337833-26339144 REVERSE LENGTH=258
Length = 258
Score = 331 bits (848), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 160/258 (62%), Positives = 196/258 (75%), Gaps = 4/258 (1%)
Query: 1 MSRRQPSSTRRPGGGGTFPXXXXXXXXXXXXXXXXXXXXXXGAVFLIIYAFGGSGLFGGR 60
MSRRQ RR G G+FP GA LI YA+ G G+F
Sbjct: 1 MSRRQ---VRRVGDSGSFPFVGALHSKSRSSPLLSVCLVLVGACLLIGYAYSGPGMFKSI 57
Query: 61 KDGVSRVEGDFSCTSEVQSAIPVLKKAYGGNMKNVLHVGPESCSVVSKLIKEGETEAWGV 120
++ VS++ GD+SCT+EVQ AIP+LK AYG +M+ VLHVGPE+CSVVS L+ E ETEAWGV
Sbjct: 58 RE-VSKITGDYSCTAEVQRAIPILKSAYGDSMRKVLHVGPETCSVVSSLLNEEETEAWGV 116
Query: 121 DPYEIEDADRNCKALMHKGIVRVADIKFPLPYREKSFSHVIVSDALDYLSPKYLNKTLPE 180
+PY++EDAD NCK+L+HKG+VRVADIKFPLPYR KSFS VIVSDALDYLSP+YLNKT+PE
Sbjct: 117 EPYDVEDADSNCKSLLHKGLVRVADIKFPLPYRSKSFSLVIVSDALDYLSPRYLNKTVPE 176
Query: 181 LVRVSADGVVIFTGYPGQRRAKVAQLSKFGRPAKMRSSSSWKQIFAEASLEENEASVKKF 240
L RV++DGVV+ G PGQ++AK +LSKFGRPAKMRSSS W + F++ +LEENEA+ KKF
Sbjct: 177 LARVASDGVVLLAGNPGQQKAKGGELSKFGRPAKMRSSSWWIRFFSQTNLEENEAASKKF 236
Query: 241 EEAASKMSYAPSCQIFHL 258
E+AASK SY P+CQ+FHL
Sbjct: 237 EQAASKSSYKPACQVFHL 254