Miyakogusa Predicted Gene

Lj0g3v0243479.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0243479.1 Non Chatacterized Hit- tr|B9S8S5|B9S8S5_RICCO
Putative uncharacterized protein OS=Ricinus communis G,37.13,1e-16,
,CUFF.15903.1
         (164 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G23755.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   140   3e-34

>AT2G23755.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endomembrane
           system; Has 35333 Blast hits to 34131 proteins in 2444
           species: Archae - 798; Bacteria - 22429; Metazoa - 974;
           Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes
           - 9610 (source: NCBI BLink). | chr2:10103375-10103985
           REVERSE LENGTH=150
          Length = 150

 Score =  140 bits (354), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 78/163 (47%), Positives = 102/163 (62%), Gaps = 14/163 (8%)

Query: 1   MATSRRLFNFCSLLMATLFMYSASVQLNDPDWYFWFPLYSCASLINITNCIMITTKLNRL 60
           MA  R LF  CSLLMA LF YSASVQLNDPDWYFWFPLY+ A ++N+ N      ++  +
Sbjct: 1   MAKPRNLFRVCSLLMAFLFAYSASVQLNDPDWYFWFPLYTLACVVNLIN---YRRRIKLM 57

Query: 61  IAKTALWIGILLYLKVVVEDFVYGIAGFWSLDLSKRVVREKIGSVLVVLSTFLQMEASKF 120
           + +TAL +G+ L +KV+ ED +    G  SLDL+ RVVREKIGS LV+ S  LQ++AS  
Sbjct: 58  MMRTALSLGVFLLVKVIAEDVITEKVGVLSLDLTHRVVREKIGSGLVIASMVLQLQASSS 117

Query: 121 QNDPQKNREKDVSSIVKHGMLILVVFSYMLPFVFFVVLKAEME 163
                       S  +  GM+  V+F Y LPF FF + K E++
Sbjct: 118 S-----------SKTIDFGMVATVIFGYGLPFWFFTIEKGEIK 149