Miyakogusa Predicted Gene

Lj0g3v0243069.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0243069.1 tr|D6MJW7|D6MJW7_9ASPA Transcription factor
(Fragment) OS=Lycoris longituba PE=2 SV=1,40.45,3e-19,no
description,Tify; seg,NULL; TIFY,Tify; CCT_2,CO/COL/TOC1, conserved
site; tify,Tify,NODE_47929_length_724_cov_54.046963.path2.1
         (203 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G19180.1 | Symbols: JAZ1, TIFY10A | jasmonate-zim-domain prot...   141   3e-34
AT1G74950.1 | Symbols: JAZ2, TIFY10B | TIFY domain/Divergent CCT...   116   1e-26
AT1G19180.2 | Symbols: TIFY10A | jasmonate-zim-domain protein 1 ...    97   7e-21
AT1G17380.1 | Symbols: JAZ5, TIFY11A | jasmonate-zim-domain prot...    86   2e-17
AT1G72450.1 | Symbols: JAZ6, TIFY11B | jasmonate-zim-domain prot...    84   4e-17
AT3G43440.1 | Symbols: JAZ11, TIFY3A | jasmonate-zim-domain prot...    54   9e-08
AT5G13220.1 | Symbols: JAZ10, TIFY9, JAS1 | jasmonate-zim-domain...    52   3e-07

>AT1G19180.1 | Symbols: JAZ1, TIFY10A | jasmonate-zim-domain protein
           1 | chr1:6622312-6623271 FORWARD LENGTH=253
          Length = 253

 Score =  141 bits (356), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/230 (40%), Positives = 120/230 (52%), Gaps = 49/230 (21%)

Query: 18  TFSQTCNLLSQYLKEKGSFGDLTLGM--ERNVQGS------PVTTMELFPMATQNLKSM- 68
           +FSQTC+ LSQYLKE GSFGDL+LGM  + +V G+      P TTM LFP    N+ SM 
Sbjct: 22  SFSQTCSRLSQYLKENGSFGDLSLGMACKPDVNGTLGNSRQPTTTMSLFPCEASNMDSMV 81

Query: 69  ------NLF-----------YPPQQSEVPTLVKSSAMGNEPKAAQLTMFYEGQVIGFDDF 111
                 NLF             P++  +     + ++  E + A LT+FY GQVI F+DF
Sbjct: 82  QDVKPTNLFPRQPSFSSSSSSLPKEDVLKMTQTTRSVKPESQTAPLTIFYAGQVIVFNDF 141

Query: 112 PAEKVKEIMAYASKGVXXXXXXXXXX-----XXXXXXXPSIR------PI------VHDL 154
            AEK KE++  ASKG                       P  R      PI      + +L
Sbjct: 142 SAEKAKEVINLASKGTANSLAKNQTDIRSNIATIANQVPHPRKTTTQEPIQSSPTPLTEL 201

Query: 155 PIARKVSLHRFLEKRKDRISSKAPYQISAPEKPVE------SISWLGLGA 198
           PIAR+ SLHRFLEKRKDR++SKAPYQ+  P K         ++SWLGL A
Sbjct: 202 PIARRASLHRFLEKRKDRVTSKAPYQLCDPAKASSNPQTTGNMSWLGLAA 251


>AT1G74950.1 | Symbols: JAZ2, TIFY10B | TIFY domain/Divergent CCT
           motif family protein | chr1:28148919-28150258 REVERSE
           LENGTH=249
          Length = 249

 Score =  116 bits (290), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/233 (37%), Positives = 116/233 (49%), Gaps = 59/233 (25%)

Query: 18  TFSQTCNLLSQYLKEKGSFGDLTLGM--ERNVQGSPV--TTMELFPM---------ATQN 64
           +FSQTC  LS+YLKEKGSFGDL+LGM  + +V G     T M LFP            ++
Sbjct: 17  SFSQTCTRLSRYLKEKGSFGDLSLGMTCKPDVNGGSRQPTMMNLFPCEASGMDSSAGQED 76

Query: 65  LKSMNLFYPPQQS-----------EVPTLVKSSAMGNEP--KAAQLTMFYEGQVIGFDDF 111
           +K   +F  P+QS           E   ++K +    +P  ++A LT+FY G+V+ FDDF
Sbjct: 77  IKPKTMF--PRQSSFSSSSSSGTKEDVQMIKETTKSVKPESQSAPLTIFYGGRVMVFDDF 134

Query: 112 PAEKVKEIMAYASKG-----------VXXXXXXXXXXXXXXXXXPSIRP----------- 149
            AEK KE++  A+KG           V                 P   P           
Sbjct: 135 SAEKAKEVIDLANKGSAKSFTCFTAEVNNNHSAYSQKEIASSPNPVCSPAKTAAQEPIQP 194

Query: 150 ----IVHDLPIARKVSLHRFLEKRKDRISSKAPYQIS----APEKPVESISWL 194
               +  +LPIAR+ SLHRFLEKRKDRI+SKAPYQI     A  KP  + +WL
Sbjct: 195 NPASLACELPIARRASLHRFLEKRKDRITSKAPYQIDGSAEASSKPT-NPAWL 246


>AT1G19180.2 | Symbols: TIFY10A | jasmonate-zim-domain protein 1 |
           chr1:6622708-6623271 FORWARD LENGTH=187
          Length = 187

 Score = 97.1 bits (240), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 68/185 (36%), Positives = 88/185 (47%), Gaps = 41/185 (22%)

Query: 55  MELFPMATQNLKSM-------NLF-----------YPPQQSEVPTLVKSSAMGNEPKAAQ 96
           M LFP    N+ SM       NLF             P++  +     + ++  E + A 
Sbjct: 1   MSLFPCEASNMDSMVQDVKPTNLFPRQPSFSSSSSSLPKEDVLKMTQTTRSVKPESQTAP 60

Query: 97  LTMFYEGQVIGFDDFPAEKVKEIMAYASKGVXXXXXXXXXX-----XXXXXXXPSIR--- 148
           LT+FY GQVI F+DF AEK KE++  ASKG                       P  R   
Sbjct: 61  LTIFYAGQVIVFNDFSAEKAKEVINLASKGTANSLAKNQTDIRSNIATIANQVPHPRKTT 120

Query: 149 ---PI------VHDLPIARKVSLHRFLEKRKDRISSKAPYQISAPEKPVE------SISW 193
              PI      + +LPIAR+ SLHRFLEKRKDR++SKAPYQ+  P K         ++SW
Sbjct: 121 TQEPIQSSPTPLTELPIARRASLHRFLEKRKDRVTSKAPYQLCDPAKASSNPQTTGNMSW 180

Query: 194 LGLGA 198
           LGL A
Sbjct: 181 LGLAA 185


>AT1G17380.1 | Symbols: JAZ5, TIFY11A | jasmonate-zim-domain protein
           5 | chr1:5955654-5957070 REVERSE LENGTH=274
          Length = 274

 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 93/198 (46%), Gaps = 37/198 (18%)

Query: 17  TTFSQTCNLLSQYLKEKGSFGDLTLGMERNVQGSPVTTMELFPMATQNL--KSMNLFYPP 74
           + F++ C+LLS+YLKEKGSFG++ LG+ R    S     +  P   QN   K+ +    P
Sbjct: 16  SDFTRRCSLLSRYLKEKGSFGNIDLGLYRKPDSSLALPGKFDPPGKQNAMHKAGHSKGEP 75

Query: 75  QQS------EVPTLVKSSAMGNEPKAAQLTMFYEGQVIGFDDFPAEKVKEIMAYASKGVX 128
             S      +V  L +S     +P ++QLT+F+ G+V+ +++FP +K KEIM  A +   
Sbjct: 76  STSSGGKVKDVADLSES-----QPGSSQLTIFFGGKVLVYNEFPVDKAKEIMEVAKQAKP 130

Query: 129 XXXXXXXXXXXXXXXXPSIRPIVHDLP------------------------IARKVSLHR 164
                                ++ DL                         IAR+ SLHR
Sbjct: 131 VTEINIQTPINDENNNNKSSMVLPDLNEPTDNNHLTKEQQQQQEQNQIVERIARRASLHR 190

Query: 165 FLEKRKDRISSKAPYQIS 182
           F  KRKDR  ++APYQ++
Sbjct: 191 FFAKRKDRAVARAPYQVN 208


>AT1G72450.1 | Symbols: JAZ6, TIFY11B | jasmonate-zim-domain protein
           6 | chr1:27274336-27276136 REVERSE LENGTH=269
          Length = 269

 Score = 84.3 bits (207), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 41/205 (20%)

Query: 17  TTFSQTCNLLSQYLKEKGSFGDLTLGMER----------NVQGSPVTTMELFPMATQNLK 66
           + FSQ C+LLS+YLKEKGSFG++ +G+ R          +++G      ++    T+  K
Sbjct: 10  SNFSQRCSLLSRYLKEKGSFGNINMGLARKSDLELAGKFDLKGQQNVIKKVETSETRPFK 69

Query: 67  SMNLFYPPQQSEVP-------TLVKSSAMGNEPKAAQLTMFYEGQVIGFDDFPAEKVKEI 119
            +  F   + S           L + + +  E   +QLT+F+ G+V+ F++FP +K KEI
Sbjct: 70  LIQKFSIGEASTSTEDKAIYIDLSEPAKVAPESGNSQLTIFFGGKVMVFNEFPEDKAKEI 129

Query: 120 MAYASKGVXXXXXXXXXXXXXXXXXPSIRPIVHDLP----------------------IA 157
           M  A +                    ++  ++ DL                       IA
Sbjct: 130 MEVAKEANHVAVDSKNSQSHMNLDKSNV--VIPDLNEPTSSGNNEDQETGQQHQVVERIA 187

Query: 158 RKVSLHRFLEKRKDRISSKAPYQIS 182
           R+ SLHRF  KRKDR  ++APYQ++
Sbjct: 188 RRASLHRFFAKRKDRAVARAPYQVN 212


>AT3G43440.1 | Symbols: JAZ11, TIFY3A | jasmonate-zim-domain protein
           11 | chr3:15367670-15369774 FORWARD LENGTH=238
          Length = 238

 Score = 53.5 bits (127), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 87  AMGNEPKAA-QLTMFYEGQVIGFDDFPAEKVKEIMAYASKGVXXXXXXXXXXXXXXXXXP 145
           A   EP A+ QLT+ + G    F+  PA+KV+EI+  A  G                   
Sbjct: 35  ARSTEPDASTQLTIIFGGSCRVFNGVPAQKVQEIIRIAFAGKQTKNVTGINPALNRALSF 94

Query: 146 SIRPIVHDLPIARKVSLHRFLEKRKDR 172
           S    V DLPIAR+ SL RFLEKR+DR
Sbjct: 95  ST---VADLPIARRRSLQRFLEKRRDR 118


>AT5G13220.1 | Symbols: JAZ10, TIFY9, JAS1 | jasmonate-zim-domain
           protein 10 | chr5:4219001-4220502 FORWARD LENGTH=197
          Length = 197

 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 7/89 (7%)

Query: 97  LTMFYEGQVIGFDDFPAEKVKEIMAYASKGVXXXXXXXXXXXXXXXXXPSIRP------I 150
           +T+FY G V  F      K  EIM  A++                    ++RP      +
Sbjct: 105 MTIFYNGSVSVFQ-VSRNKAGEIMKVANEAASKKDESSMETDLSVILPTTLRPKLFGQNL 163

Query: 151 VHDLPIARKVSLHRFLEKRKDRISSKAPY 179
             DLPIAR+ SL RFLEKRK+R+ S +PY
Sbjct: 164 EGDLPIARRKSLQRFLEKRKERLVSTSPY 192