Miyakogusa Predicted Gene
- Lj0g3v0241899.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0241899.1 tr|Q6BE26|Q6BE26_CITUN Somatic embryogenesis
receptor kinase 1 OS=Citrus unshiu GN=SERK PE=2
SV=1,85.71,1e-17,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.15809.1
(75 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G71830.1 | Symbols: SERK1, ATSERK1 | somatic embryogenesis re... 89 6e-19
AT1G34210.1 | Symbols: SERK2, ATSERK2 | somatic embryogenesis re... 88 1e-18
AT2G13790.1 | Symbols: ATSERK4, SERK4, BKK1, BAK7 | somatic embr... 64 2e-11
AT4G33430.2 | Symbols: BAK1 | BRI1-associated receptor kinase | ... 59 6e-10
AT4G33430.1 | Symbols: BAK1, RKS10, SERK3, ELG, ATSERK3, ATBAK1 ... 59 7e-10
AT2G13800.1 | Symbols: ATSERK5, SERK5, BAK8 | somatic embryogene... 50 2e-07
AT5G65700.2 | Symbols: BAM1 | Leucine-rich receptor-like protein... 47 2e-06
AT5G65700.1 | Symbols: BAM1 | Leucine-rich receptor-like protein... 47 2e-06
AT3G49670.1 | Symbols: BAM2 | Leucine-rich receptor-like protein... 46 6e-06
>AT1G71830.1 | Symbols: SERK1, ATSERK1 | somatic embryogenesis
receptor-like kinase 1 | chr1:27018575-27021842 FORWARD
LENGTH=625
Length = 625
Score = 89.0 bits (219), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/50 (86%), Positives = 47/50 (94%)
Query: 1 MTLTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISFANNLDLCGPVTGN 50
M+LTNI TLQVLDLSNNRLSG VP+NGSF+LFTPISFANNLDLCGPVT +
Sbjct: 159 MSLTNITTLQVLDLSNNRLSGSVPDNGSFSLFTPISFANNLDLCGPVTSH 208
>AT1G34210.1 | Symbols: SERK2, ATSERK2 | somatic embryogenesis
receptor-like kinase 2 | chr1:12459078-12462752 FORWARD
LENGTH=628
Length = 628
Score = 87.8 bits (216), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/50 (86%), Positives = 46/50 (92%)
Query: 1 MTLTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISFANNLDLCGPVTGN 50
M+LTNI TLQVLDLSNNRLSG VP+NGSF+LFTPISFANNLDLCGPVT
Sbjct: 162 MSLTNIMTLQVLDLSNNRLSGSVPDNGSFSLFTPISFANNLDLCGPVTSR 211
>AT2G13790.1 | Symbols: ATSERK4, SERK4, BKK1, BAK7 | somatic
embryogenesis receptor-like kinase 4 |
chr2:5741979-5746581 FORWARD LENGTH=620
Length = 620
Score = 63.9 bits (154), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/40 (77%), Positives = 36/40 (90%), Gaps = 1/40 (2%)
Query: 1 MTLTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISFANN 40
MTLT++ LQVLD+SNNRLSG +P NGSF+LFTPISFANN
Sbjct: 165 MTLTSVQ-LQVLDISNNRLSGDIPVNGSFSLFTPISFANN 203
>AT4G33430.2 | Symbols: BAK1 | BRI1-associated receptor kinase |
chr4:16086654-16090288 REVERSE LENGTH=662
Length = 662
Score = 58.9 bits (141), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/38 (73%), Positives = 33/38 (86%)
Query: 2 TLTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISFAN 39
+LT + TLQVLDLSNN L+G +P NGSF+LFTPISFAN
Sbjct: 206 SLTAVLTLQVLDLSNNPLTGDIPVNGSFSLFTPISFAN 243
>AT4G33430.1 | Symbols: BAK1, RKS10, SERK3, ELG, ATSERK3, ATBAK1 |
BRI1-associated receptor kinase | chr4:16086654-16090288
REVERSE LENGTH=615
Length = 615
Score = 58.9 bits (141), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/38 (73%), Positives = 33/38 (86%)
Query: 2 TLTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISFAN 39
+LT + TLQVLDLSNN L+G +P NGSF+LFTPISFAN
Sbjct: 159 SLTAVLTLQVLDLSNNPLTGDIPVNGSFSLFTPISFAN 196
>AT2G13800.1 | Symbols: ATSERK5, SERK5, BAK8 | somatic embryogenesis
receptor-like kinase 5 | chr2:5753276-5757065 FORWARD
LENGTH=601
Length = 601
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/32 (71%), Positives = 27/32 (84%)
Query: 9 LQVLDLSNNRLSGLVPNNGSFALFTPISFANN 40
L VLD+SNNRLSG +P NGSF+ FT +SFANN
Sbjct: 167 LDVLDISNNRLSGDIPVNGSFSQFTSMSFANN 198
>AT5G65700.2 | Symbols: BAM1 | Leucine-rich receptor-like protein
kinase family protein | chr5:26281826-26284945 FORWARD
LENGTH=1003
Length = 1003
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 2 TLTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISFANNLDLCGPVTG 49
+++++ +L LD S N LSGLVP G F+ F SF N DLCGP G
Sbjct: 570 SISSMQSLTSLDFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLG 617
>AT5G65700.1 | Symbols: BAM1 | Leucine-rich receptor-like protein
kinase family protein | chr5:26281826-26284945 FORWARD
LENGTH=1003
Length = 1003
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 2 TLTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISFANNLDLCGPVTG 49
+++++ +L LD S N LSGLVP G F+ F SF N DLCGP G
Sbjct: 570 SISSMQSLTSLDFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLG 617
>AT3G49670.1 | Symbols: BAM2 | Leucine-rich receptor-like protein
kinase family protein | chr3:18417741-18420836 FORWARD
LENGTH=1002
Length = 1002
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 1 MTLTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISFANNLDLCGPVTG 49
+T+ ++ +L +D S N LSGLVP+ G F+ F SF N LCGP G
Sbjct: 570 VTIASMQSLTSVDFSYNNLSGLVPSTGQFSYFNYTSFVGNSHLCGPYLG 618