Miyakogusa Predicted Gene

Lj0g3v0241459.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0241459.1 Non Chatacterized Hit- tr|I1PNB0|I1PNB0_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=3 SV=1,59.49,2e-19,no
description,NAD(P)-binding domain; GDHRDH,Glucose/ribitol
dehydrogenase; NAD(P)-binding Rossmann-,CUFF.15772.1
         (80 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G61220.2 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...   110   2e-25
AT3G61220.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...   110   2e-25
AT2G24190.2 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...   109   3e-25
AT2G24190.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...   109   3e-25
AT1G01800.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...    97   2e-21
AT1G01800.2 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...    96   3e-21
AT3G59710.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...    62   6e-11
AT5G51030.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...    62   1e-10
AT5G61830.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...    57   3e-09

>AT3G61220.2 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr3:22663025-22664316 FORWARD LENGTH=303
          Length = 303

 Score =  110 bits (274), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/80 (60%), Positives = 62/80 (77%)

Query: 1   MSAYTISKVALNAYTRILAKKYPSFCINAVCPGYVKTDINYNTGLLTPDEGAEAAVRLAL 60
           MSAY +SK +LN YTR+LAKK+P F +NAVCPG+VKTD+N+ TG+L+ +EGA + VRLAL
Sbjct: 224 MSAYVVSKASLNGYTRVLAKKHPEFRVNAVCPGFVKTDMNFKTGVLSVEEGASSPVRLAL 283

Query: 61  LPDGSSPSGLFFYRSEEKPF 80
           LP   +PSG FF R +   F
Sbjct: 284 LPHQETPSGCFFSRKQVSEF 303


>AT3G61220.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr3:22663025-22664316 FORWARD LENGTH=296
          Length = 296

 Score =  110 bits (274), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/80 (60%), Positives = 62/80 (77%)

Query: 1   MSAYTISKVALNAYTRILAKKYPSFCINAVCPGYVKTDINYNTGLLTPDEGAEAAVRLAL 60
           MSAY +SK +LN YTR+LAKK+P F +NAVCPG+VKTD+N+ TG+L+ +EGA + VRLAL
Sbjct: 217 MSAYVVSKASLNGYTRVLAKKHPEFRVNAVCPGFVKTDMNFKTGVLSVEEGASSPVRLAL 276

Query: 61  LPDGSSPSGLFFYRSEEKPF 80
           LP   +PSG FF R +   F
Sbjct: 277 LPHQETPSGCFFSRKQVSEF 296


>AT2G24190.2 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr2:10283740-10284934 REVERSE LENGTH=301
          Length = 301

 Score =  109 bits (273), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 49/80 (61%), Positives = 61/80 (76%)

Query: 1   MSAYTISKVALNAYTRILAKKYPSFCINAVCPGYVKTDINYNTGLLTPDEGAEAAVRLAL 60
           MSAY +SK  LNAYTRILAKK+P   +N+VCPG+VKTD+N+ TG+L+ +EGA + VRLAL
Sbjct: 222 MSAYVVSKAGLNAYTRILAKKHPEIRVNSVCPGFVKTDMNFKTGILSVEEGASSPVRLAL 281

Query: 61  LPDGSSPSGLFFYRSEEKPF 80
           LP   SPSG FF R +   F
Sbjct: 282 LPHQESPSGCFFDRKQVSEF 301


>AT2G24190.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr2:10283740-10284934 REVERSE LENGTH=296
          Length = 296

 Score =  109 bits (273), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 49/80 (61%), Positives = 61/80 (76%)

Query: 1   MSAYTISKVALNAYTRILAKKYPSFCINAVCPGYVKTDINYNTGLLTPDEGAEAAVRLAL 60
           MSAY +SK  LNAYTRILAKK+P   +N+VCPG+VKTD+N+ TG+L+ +EGA + VRLAL
Sbjct: 217 MSAYVVSKAGLNAYTRILAKKHPEIRVNSVCPGFVKTDMNFKTGILSVEEGASSPVRLAL 276

Query: 61  LPDGSSPSGLFFYRSEEKPF 80
           LP   SPSG FF R +   F
Sbjct: 277 LPHQESPSGCFFDRKQVSEF 296


>AT1G01800.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr1:293396-294888 FORWARD LENGTH=295
          Length = 295

 Score = 96.7 bits (239), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 45/80 (56%), Positives = 62/80 (77%), Gaps = 1/80 (1%)

Query: 1   MSAYTISKVALNAYTRILAKKYPSFCINAVCPGYVKTDINYNTGLLTPDEGAEAAVRLAL 60
           MS Y +SK A+ A TR+LAK++ SF IN+VCPG+V T+IN+NTG+L+ +EGA + V+LAL
Sbjct: 217 MSGYILSKAAVIALTRVLAKRHKSFIINSVCPGFVNTEINFNTGILSVEEGAASPVKLAL 276

Query: 61  LPDGSSPSGLFFYRSEEKPF 80
           +P+G  PSGLFF R+    F
Sbjct: 277 VPNG-DPSGLFFDRANVSNF 295


>AT1G01800.2 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr1:293595-294888 FORWARD LENGTH=260
          Length = 260

 Score = 96.3 bits (238), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 45/80 (56%), Positives = 62/80 (77%), Gaps = 1/80 (1%)

Query: 1   MSAYTISKVALNAYTRILAKKYPSFCINAVCPGYVKTDINYNTGLLTPDEGAEAAVRLAL 60
           MS Y +SK A+ A TR+LAK++ SF IN+VCPG+V T+IN+NTG+L+ +EGA + V+LAL
Sbjct: 182 MSGYILSKAAVIALTRVLAKRHKSFIINSVCPGFVNTEINFNTGILSVEEGAASPVKLAL 241

Query: 61  LPDGSSPSGLFFYRSEEKPF 80
           +P+G  PSGLFF R+    F
Sbjct: 242 VPNG-DPSGLFFDRANVSNF 260


>AT3G59710.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr3:22055220-22057156 REVERSE LENGTH=302
          Length = 302

 Score = 62.4 bits (150), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 2/79 (2%)

Query: 4   YTISKVALNAYTRILAKKY--PSFCINAVCPGYVKTDINYNTGLLTPDEGAEAAVRLALL 61
           Y ISK+ALNAY+R+LA++Y      +N +CPG+ +T +    G  T DE A    +L LL
Sbjct: 220 YAISKLALNAYSRVLARRYDGKKLSVNCLCPGFTRTSMTGGQGTHTADEAAAIVAKLVLL 279

Query: 62  PDGSSPSGLFFYRSEEKPF 80
           P     +G F+   E K  
Sbjct: 280 PPEKLATGKFYICVESKKL 298


>AT5G51030.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr5:20747862-20749352 REVERSE LENGTH=314
          Length = 314

 Score = 61.6 bits (148), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 7/83 (8%)

Query: 4   YTISKVALNAYTRILAKKYPS------FCINAVCPGYVKTDINYNTGLLTPDEGAEAAVR 57
           Y++SK+A+NAYTR+LAK+            N  CPG+VKT +    G ++ ++GA+  V 
Sbjct: 233 YSVSKMAVNAYTRVLAKELSERPEGEKIYANCFCPGWVKTAMTGYAGNVSAEDGADTGVW 292

Query: 58  LALLPDGSSPSGLFFYRSEEKPF 80
           LALLPD  + +G FF    E  F
Sbjct: 293 LALLPD-QAITGKFFAERREISF 314


>AT5G61830.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr5:24837335-24838788 FORWARD LENGTH=316
          Length = 316

 Score = 56.6 bits (135), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 6/83 (7%)

Query: 4   YTISKVALNAYTRILAKKYP------SFCINAVCPGYVKTDINYNTGLLTPDEGAEAAVR 57
           Y++SK+A+NAYTR++AK+           +N+ CPG+VKT +    G + P++ A+  V 
Sbjct: 234 YSMSKLAVNAYTRLMAKELERRGEEEKIYVNSFCPGWVKTAMTGYAGNMPPEDAADTGVW 293

Query: 58  LALLPDGSSPSGLFFYRSEEKPF 80
           L+L+    + +G FF    E  F
Sbjct: 294 LSLVLSEEAVTGKFFAERREINF 316