Miyakogusa Predicted Gene

Lj0g3v0241359.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0241359.1 Non Chatacterized Hit- tr|I3SEM2|I3SEM2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,91.67,0.00000000009,seg,NULL,CUFF.15766.1
         (53 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G44110.2 | Symbols: ATJ3, ATJ | DNAJ homologue 3 | chr3:15869...    67   2e-12
AT3G44110.1 | Symbols: ATJ3, ATJ | DNAJ homologue 3 | chr3:15869...    66   4e-12
AT5G22060.1 | Symbols: ATJ2, J2 | DNAJ homologue 2 | chr5:730379...    65   1e-11

>AT3G44110.2 | Symbols: ATJ3, ATJ | DNAJ homologue 3 |
           chr3:15869179-15871059 REVERSE LENGTH=343
          Length = 343

 Score = 67.0 bits (162), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/36 (86%), Positives = 32/36 (88%)

Query: 15  DIVFVLQLKEHPKFKRKAEDLFVEHTLSLTEAVLYF 50
           DIVFVLQ KEHPKFKRK EDLFVEHTLSLTEA+  F
Sbjct: 252 DIVFVLQQKEHPKFKRKGEDLFVEHTLSLTEALCGF 287


>AT3G44110.1 | Symbols: ATJ3, ATJ | DNAJ homologue 3 |
           chr3:15869115-15871059 REVERSE LENGTH=420
          Length = 420

 Score = 66.2 bits (160), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/36 (86%), Positives = 32/36 (88%)

Query: 15  DIVFVLQLKEHPKFKRKAEDLFVEHTLSLTEAVLYF 50
           DIVFVLQ KEHPKFKRK EDLFVEHTLSLTEA+  F
Sbjct: 252 DIVFVLQQKEHPKFKRKGEDLFVEHTLSLTEALCGF 287


>AT5G22060.1 | Symbols: ATJ2, J2 | DNAJ homologue 2 |
           chr5:7303798-7305668 REVERSE LENGTH=419
          Length = 419

 Score = 64.7 bits (156), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/36 (80%), Positives = 32/36 (88%)

Query: 15  DIVFVLQLKEHPKFKRKAEDLFVEHTLSLTEAVLYF 50
           DIVFV+Q KEHPKFKRK EDLFVEHT+SLTEA+  F
Sbjct: 253 DIVFVIQQKEHPKFKRKGEDLFVEHTISLTEALCGF 288