Miyakogusa Predicted Gene

Lj0g3v0241139.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0241139.1 Non Chatacterized Hit- tr|I1PPH5|I1PPH5_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,45.28,4e-18,seg,NULL; LEUCINE-RICH REPEAT-CONTAINING
PROTEIN,NULL,gene.g18857.t1.1
         (113 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G29880.1 | Symbols: PIRL7 | plant intracellular ras group-rel...    94   2e-20
AT2G19330.1 | Symbols: PIRL6 | plant intracellular ras group-rel...    91   2e-19
AT4G26050.1 | Symbols: PIRL8 | plant intracellular ras group-rel...    77   2e-15

>AT4G29880.1 | Symbols: PIRL7 | plant intracellular ras
           group-related LRR 7 | chr4:14607078-14608379 REVERSE
           LENGTH=373
          Length = 373

 Score = 94.0 bits (232), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)

Query: 2   KLQKLSVEGNPLVSPPMEVVEQGLHVVKEFMCHKMNSE--HKIPTKRSW-IRKLVKLGTF 58
           +L+KLS EGNPLVSPP+EVVEQ LH V+E++  KMN +  +    K++W  RKLVK GTF
Sbjct: 265 RLRKLSAEGNPLVSPPIEVVEQSLHAVREYLSQKMNGKLVNTAAKKKTWGFRKLVKYGTF 324

Query: 59  NGYERRGKRSEHKGIDMLQYQPINGLATPGF 89
           NG  R   R E +G+ M +Y+PI+ L +  F
Sbjct: 325 NGRSRVWTREEREGLIMPEYRPIDILTSTKF 355


>AT2G19330.1 | Symbols: PIRL6 | plant intracellular ras
           group-related LRR 6 | chr2:8372947-8374453 FORWARD
           LENGTH=380
          Length = 380

 Score = 90.5 bits (223), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/93 (52%), Positives = 63/93 (67%), Gaps = 3/93 (3%)

Query: 2   KLQKLSVEGNPLVSPPMEVVEQGLHVVKEFMCHKMN--SEHKIPTKRSW-IRKLVKLGTF 58
           +L+KLSVEGNPLVSPP+EV+EQ L VV+E++  KMN  S      K+SW   KLVK GTF
Sbjct: 272 RLRKLSVEGNPLVSPPIEVMEQNLQVVREYLTQKMNGGSPRSPSKKKSWGFGKLVKYGTF 331

Query: 59  NGYERRGKRSEHKGIDMLQYQPINGLATPGFLG 91
           NG  R   R E +G  M +Y+ I+ LA+P + G
Sbjct: 332 NGGSRSWNREEREGFIMPEYRSIDSLASPRYSG 364


>AT4G26050.1 | Symbols: PIRL8 | plant intracellular ras
           group-related LRR 8 | chr4:13210522-13213149 FORWARD
           LENGTH=383
          Length = 383

 Score = 77.0 bits (188), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 5/91 (5%)

Query: 2   KLQKLSVEGNPLVSPPMEVVEQGLHVVKEFMCHKMNSEH-KIPT-KRSW-IRKLVKLGTF 58
           ++QKLSVEGNPL+SPP EVVEQGL  +K++M  KM   + K PT K+SW I KLVK G  
Sbjct: 269 RIQKLSVEGNPLISPPFEVVEQGLEALKQYMSEKMTESYKKTPTKKKSWGIGKLVKYGLS 328

Query: 59  NGYERRGKRSEHKG--IDMLQYQPINGLATP 87
           +   R   R + K   I++  Y+ I+G+A+P
Sbjct: 329 SSPGRSTGREDGKEGFINVSDYRQIDGIASP 359