Miyakogusa Predicted Gene

Lj0g3v0241109.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0241109.1 Non Chatacterized Hit- tr|I3JQ65|I3JQ65_ORENI
Uncharacterized protein OS=Oreochromis niloticus
GN=OS,45.28,2e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
OST3_OST6,Oligosaccharyl transferase complex,
subun,NODE_15245_length_494_cov_485.967621.path2.1
         (107 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G29870.1 | Symbols:  | Oligosaccharyltransferase complex/magn...   144   2e-35
AT2G19340.2 | Symbols:  | Oligosaccharyltransferase complex/magn...   139   5e-34
AT2G19340.1 | Symbols:  | Oligosaccharyltransferase complex/magn...   118   9e-28

>AT4G29870.1 | Symbols:  | Oligosaccharyltransferase
           complex/magnesium transporter family protein |
           chr4:14606012-14606530 FORWARD LENGTH=172
          Length = 172

 Score =  144 bits (362), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 73/107 (68%), Positives = 83/107 (77%)

Query: 1   MVVSGIVYDIIVEPPGIGSTQDPYTGAVKPVVFMSGRVNGQYIIEGLSSGFMFXXXXXXX 60
           +VVSG VYD+IVEPPGIGSTQDP TG+V+PVVFMSGRVNGQYIIEGLSSGFMF       
Sbjct: 66  LVVSGFVYDVIVEPPGIGSTQDPITGSVRPVVFMSGRVNGQYIIEGLSSGFMFVLGGIGI 125

Query: 61  XXXXXXXXXXXXXSVKVSYASAGITSVLLAYVMSMLFIRIKIPAYLR 107
                        SVK SYA+AG++S+++AYVMSMLFIRIKIP YLR
Sbjct: 126 IMLDLALDKNRAKSVKASYATAGVSSIVIAYVMSMLFIRIKIPGYLR 172


>AT2G19340.2 | Symbols:  | Oligosaccharyltransferase
           complex/magnesium transporter family protein |
           chr2:8375274-8375795 REVERSE LENGTH=173
          Length = 173

 Score =  139 bits (349), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 71/106 (66%), Positives = 80/106 (75%)

Query: 1   MVVSGIVYDIIVEPPGIGSTQDPYTGAVKPVVFMSGRVNGQYIIEGLSSGFMFXXXXXXX 60
           +VVSG VYD+IVEPPGIGSTQDP TG ++PVVFMSGRVNGQYIIEGLSSGFMF       
Sbjct: 67  LVVSGFVYDVIVEPPGIGSTQDPTTGTIRPVVFMSGRVNGQYIIEGLSSGFMFVLGGIGI 126

Query: 61  XXXXXXXXXXXXXSVKVSYASAGITSVLLAYVMSMLFIRIKIPAYL 106
                        SVK SYA AG++S+++AYVMSMLFIRIKIP YL
Sbjct: 127 VMLDLALDKNKAKSVKASYAVAGVSSIVIAYVMSMLFIRIKIPGYL 172


>AT2G19340.1 | Symbols:  | Oligosaccharyltransferase
           complex/magnesium transporter family protein |
           chr2:8374313-8375795 REVERSE LENGTH=200
          Length = 200

 Score =  118 bits (295), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 60/94 (63%), Positives = 69/94 (73%)

Query: 1   MVVSGIVYDIIVEPPGIGSTQDPYTGAVKPVVFMSGRVNGQYIIEGLSSGFMFXXXXXXX 60
           +VVSG VYD+IVEPPGIGSTQDP TG ++PVVFMSGRVNGQYIIEGLSSGFMF       
Sbjct: 67  LVVSGFVYDVIVEPPGIGSTQDPTTGTIRPVVFMSGRVNGQYIIEGLSSGFMFVLGGIGI 126

Query: 61  XXXXXXXXXXXXXSVKVSYASAGITSVLLAYVMS 94
                        SVK SYA AG++S+++AYVMS
Sbjct: 127 VMLDLALDKNKAKSVKASYAVAGVSSIVIAYVMS 160