Miyakogusa Predicted Gene

Lj0g3v0240569.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0240569.2 Non Chatacterized Hit- tr|I3ST69|I3ST69_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,84.94,0,seg,NULL; DUF819,Protein of unknown function
DUF819,CUFF.15738.2
         (312 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G24000.1 | Symbols:  | Protein of unknown function (DUF819) |...   322   3e-88
AT5G52540.1 | Symbols:  | Protein of unknown function (DUF819) |...   319   1e-87

>AT5G24000.1 | Symbols:  | Protein of unknown function (DUF819) |
           chr5:8110380-8112692 REVERSE LENGTH=443
          Length = 443

 Score =  322 bits (824), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 173/313 (55%), Positives = 212/313 (67%), Gaps = 3/313 (0%)

Query: 1   MVSAALVSTLVGLAASNLGILPHNAPAYSIVLEXXXXXXXXXXXXGANLYQVVRSTGTLL 60
           MVS AL STL+GLAASNL ++P   P+Y   +E             A+L +++RSTG+LL
Sbjct: 99  MVSGALTSTLLGLAASNLRLIPFETPSYGFFMEFLLPHTIPLLLFRADLRRIIRSTGSLL 158

Query: 61  LAFLLGSVASVVGTLVAFLLVPMRSLGPDNWKIAASLMGSYIGGSVNYVAISEALGMSAS 120
           LAFL+GSVA++VGT+VAF+LVPMRSLGPDNWKIAA+LMGSYIGGS+N+VAISEAL +S S
Sbjct: 159 LAFLIGSVATIVGTVVAFMLVPMRSLGPDNWKIAAALMGSYIGGSLNFVAISEALQISPS 218

Query: 121 VLAAGVAADNVITALYFMVLFALASKIPAEAAAPTTDDKMDMESDN--EGNLPVLQTATA 178
           V+AAGVA DNVI AL+FMVLFALASKIP E A+ ++ D  DM  D+  E    V+ T+ A
Sbjct: 219 VIAAGVAVDNVICALHFMVLFALASKIPPETASASSPDA-DMTKDDKLEDKNRVVSTSIA 277

Query: 179 LATSFLICRAATYVTKASGVQGGTLPGITAIVVILATLLPRQIGPLVPAGHTVALVLMQX 238
           L+ SFLIC+AA  +T    +QG  LP +TAI ++LAT  P     L P+  T++L+LMQ 
Sbjct: 278 LSVSFLICKAAITLTTLFKIQGVMLPAVTAITIVLATSFPDFFNSLAPSAETISLILMQV 337

Query: 239 XXXXXXXXXXXWNVIKTAPSIFLFALVQVTVHXXXXXXXXXXXXXXXXXXXXASNANIGG 298
                      WNVI TAPSIFLFA +QV VH                    ASNANIGG
Sbjct: 338 FFTILGATGSVWNVINTAPSIFLFAAIQVMVHLAVTLVLGKLFCIDMKLLLLASNANIGG 397

Query: 299 PTTACGMAKAKGW 311
           PTTAC MA AKGW
Sbjct: 398 PTTACAMATAKGW 410


>AT5G52540.1 | Symbols:  | Protein of unknown function (DUF819) |
           chr5:21321672-21323702 REVERSE LENGTH=461
          Length = 461

 Score =  319 bits (818), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 174/314 (55%), Positives = 214/314 (68%), Gaps = 3/314 (0%)

Query: 2   VSAALVSTLVGLAASNLGILPHNAPAYSIVLEXXXXXXXXXXXXGANLYQVVRSTGTLLL 61
           +S ALVSTLVGLAASNLGI+   APA+++VL              A+L +VV+STG LLL
Sbjct: 116 MSGALVSTLVGLAASNLGIISSQAPAFAVVLNFLLPLAVPLLLFRADLRRVVQSTGKLLL 175

Query: 62  AFLLGSVASVVGTLVAFLLVPMRSLGPDNWKIAASLMGSYIGGSVNYVAISEALGMSASV 121
           AFL+GSVA+ VGT +A+ LVPM+SLGPD+WKIAA+LMG +IGG+VNYVAIS ALG++ SV
Sbjct: 176 AFLIGSVATTVGTALAYYLVPMKSLGPDSWKIAAALMGRHIGGAVNYVAISNALGVTPSV 235

Query: 122 LAAGVAADNVITALYFMVLFALASKIPAEAAAPTT---DDKMDMESDNEGNLPVLQTATA 178
           LAAG+AADNVI A+YF  LFAL SKIPAEA  P T   D + +  S+ +  +PVL  AT 
Sbjct: 236 LAAGLAADNVICAVYFTTLFALGSKIPAEAVPPPTTIVDAETNEASETKNKIPVLLIATG 295

Query: 179 LATSFLICRAATYVTKASGVQGGTLPGITAIVVILATLLPRQIGPLVPAGHTVALVLMQX 238
           +A S  IC+A   +TK  G+ GG+LP ITA+VVILAT+ P Q G L P+G  +AL+LMQ 
Sbjct: 296 IAVSLAICKAGALLTKYFGISGGSLPAITAVVVILATVFPSQFGRLAPSGEAMALILMQV 355

Query: 239 XXXXXXXXXXXWNVIKTAPSIFLFALVQVTVHXXXXXXXXXXXXXXXXXXXXASNANIGG 298
                      W+VI TAPSIFLFALVQ+  H                    ASNAN+GG
Sbjct: 356 FFTVVGASGNIWSVINTAPSIFLFALVQIGTHLAVILGIGKLLNIELRLLLLASNANVGG 415

Query: 299 PTTACGMAKAKGWD 312
           PTTA GMA AKGW+
Sbjct: 416 PTTAAGMATAKGWN 429