Miyakogusa Predicted Gene
- Lj0g3v0239839.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0239839.1 Non Chatacterized Hit- tr|C5XY07|C5XY07_SORBI
Putative uncharacterized protein Sb04g007400 OS=Sorghu,42.76,3e-19,ABC
TRANSPORTER,NULL; ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A
(ABCA),ABC transporter A,
ABCA,NODE_40083_length_417_cov_39.980816.path3.1
(152 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G47790.1 | Symbols: ATATH7, ATH7 | ABC2 homolog 7 | chr3:1762... 213 5e-56
AT3G47770.1 | Symbols: ATATH5, ATH5, ABCA6 | ABC2 homolog 5 | ch... 206 6e-54
AT3G47740.1 | Symbols: ATATH2, ATH2, ABCA3 | ABC2 homolog 2 | ch... 199 8e-52
AT3G47780.1 | Symbols: ATATH6, ATH6 | ABC2 homolog 6 | chr3:1762... 197 2e-51
AT3G47750.1 | Symbols: ATATH3, ABCA4 | ATP binding cassette subf... 196 4e-51
AT5G61700.1 | Symbols: ATATH16, ATH16 | ABC2 homolog 16 | chr5:2... 143 4e-35
AT3G47760.1 | Symbols: ATATH4, ATH4, ABCA5 | ABC2 homolog 4 | ch... 141 1e-34
AT5G61740.1 | Symbols: ATATH14, ATH14 | ABC2 homolog 14 | chr5:2... 123 6e-29
>AT3G47790.1 | Symbols: ATATH7, ATH7 | ABC2 homolog 7 |
chr3:17629584-17633711 FORWARD LENGTH=901
Length = 901
Score = 213 bits (541), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 102/149 (68%), Positives = 120/149 (80%)
Query: 1 MMKMHGLGDGPYWLISYGYFLAISAIYVLCFVIFGSVIGLKFFTMNDYSIQFVFYFLFIN 60
MMKMHGLGD PYW++SY YFL IS +Y+LCF IFGS+IGL FF +NDYSIQ VF+F+ IN
Sbjct: 350 MMKMHGLGDVPYWIVSYTYFLLISILYMLCFAIFGSLIGLNFFRLNDYSIQLVFFFICIN 409
Query: 61 LQISLAFLLACLFSNVKTAAVFAYIGVFGTGSLGASLLQFFVQEKSFSRGWIIVMELYPG 120
LQIS+AFL + +FS+VKTA V AYI VFGTG LG L QFF+++ F RGWII MELYPG
Sbjct: 410 LQISVAFLASAMFSDVKTATVIAYIYVFGTGLLGIFLFQFFLEDPLFPRGWIIAMELYPG 469
Query: 121 FSLFRGLYEFSQSSFTGDALGTHGMRWGD 149
FSL+RGLYE SQS+F GD G GM+W D
Sbjct: 470 FSLYRGLYELSQSAFAGDYRGIDGMKWRD 498
>AT3G47770.1 | Symbols: ATATH5, ATH5, ABCA6 | ABC2 homolog 5 |
chr3:17618055-17622678 FORWARD LENGTH=900
Length = 900
Score = 206 bits (523), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 98/149 (65%), Positives = 118/149 (79%)
Query: 1 MMKMHGLGDGPYWLISYGYFLAISAIYVLCFVIFGSVIGLKFFTMNDYSIQFVFYFLFIN 60
+MKMHGLGD PYW+ISY YFLAIS +Y++C +IFGS IGLKFF NDY+IQF+FYFL+IN
Sbjct: 344 IMKMHGLGDAPYWMISYAYFLAISTLYIVCLMIFGSAIGLKFFRFNDYTIQFMFYFLYIN 403
Query: 61 LQISLAFLLACLFSNVKTAAVFAYIGVFGTGSLGASLLQFFVQEKSFSRGWIIVMELYPG 120
LQIS+AFL++ FS TA+V AYI VFG+G LGA L QF ++ SF R WI VMELYPG
Sbjct: 404 LQISIAFLVSSAFSKAVTASVVAYIYVFGSGLLGAFLFQFLIESLSFPRRWIFVMELYPG 463
Query: 121 FSLFRGLYEFSQSSFTGDALGTHGMRWGD 149
FSL+RGLYEFSQ +F + G GM+W D
Sbjct: 464 FSLYRGLYEFSQYAFQRNLNGRDGMKWKD 492
>AT3G47740.1 | Symbols: ATATH2, ATH2, ABCA3 | ABC2 homolog 2 |
chr3:17600651-17604965 FORWARD LENGTH=932
Length = 932
Score = 199 bits (505), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 97/152 (63%), Positives = 122/152 (80%)
Query: 1 MMKMHGLGDGPYWLISYGYFLAISAIYVLCFVIFGSVIGLKFFTMNDYSIQFVFYFLFIN 60
+MKMHGLGDGPYW+ISY YFLA+S Y++ +IFGSVIGLKFF +ND+S+QF FYF++IN
Sbjct: 373 IMKMHGLGDGPYWIISYAYFLALSTFYIIFLMIFGSVIGLKFFLLNDFSLQFSFYFVYIN 432
Query: 61 LQISLAFLLACLFSNVKTAAVFAYIGVFGTGSLGASLLQFFVQEKSFSRGWIIVMELYPG 120
LQIS+AFLL+ FS V+TA+V AY+ VFG+G LG L QF ++ SF R WI VMELYPG
Sbjct: 433 LQISIAFLLSSAFSKVETASVAAYLYVFGSGLLGMFLFQFLLEGLSFPRRWIFVMELYPG 492
Query: 121 FSLFRGLYEFSQSSFTGDALGTHGMRWGDLSD 152
FSL+RGLYEFSQ+++ G+ G GM+W SD
Sbjct: 493 FSLYRGLYEFSQNAYQGNLNGKDGMKWKYFSD 524
>AT3G47780.1 | Symbols: ATATH6, ATH6 | ABC2 homolog 6 |
chr3:17624500-17628972 FORWARD LENGTH=935
Length = 935
Score = 197 bits (501), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/152 (65%), Positives = 123/152 (80%)
Query: 1 MMKMHGLGDGPYWLISYGYFLAISAIYVLCFVIFGSVIGLKFFTMNDYSIQFVFYFLFIN 60
+MKMHGLGDGPYW+ISY YFL IS +YV+C +IFGS IGLKFF +N YSIQFVFYFL++N
Sbjct: 373 IMKMHGLGDGPYWMISYAYFLTISVLYVICLMIFGSAIGLKFFRLNSYSIQFVFYFLYLN 432
Query: 61 LQISLAFLLACLFSNVKTAAVFAYIGVFGTGSLGASLLQFFVQEKSFSRGWIIVMELYPG 120
LQI+LAFL++ +FS VKT+ V +YI VFG+G LG LL F +++ SF RGWIIVMELYPG
Sbjct: 433 LQIALAFLVSSVFSKVKTSTVASYIYVFGSGLLGLFLLNFLIEDSSFPRGWIIVMELYPG 492
Query: 121 FSLFRGLYEFSQSSFTGDALGTHGMRWGDLSD 152
FSL+RGLYE +Q +F G+ G GM+W D D
Sbjct: 493 FSLYRGLYELAQFAFRGNLRGEDGMKWKDFGD 524
>AT3G47750.1 | Symbols: ATATH3, ABCA4 | ATP binding cassette
subfamily A4 | chr3:17606427-17610889 FORWARD LENGTH=947
Length = 947
Score = 196 bits (499), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 99/162 (61%), Positives = 120/162 (74%), Gaps = 10/162 (6%)
Query: 1 MMKMHGLGDGPYWLISYGYFLAISAIYVLCFVIFGSVI----------GLKFFTMNDYSI 50
+MKMHGLGDGPYW+I+Y YFLAIS +Y++C +IFGS I GLKFF NDYSI
Sbjct: 375 IMKMHGLGDGPYWMITYAYFLAISTLYIICLMIFGSAIEQVSELFLLVGLKFFRFNDYSI 434
Query: 51 QFVFYFLFINLQISLAFLLACLFSNVKTAAVFAYIGVFGTGSLGASLLQFFVQEKSFSRG 110
QF+FYFL INLQIS+AFL++ FS V+TA+V AY+ VFG+G LG L QF ++ SF RG
Sbjct: 435 QFIFYFLCINLQISIAFLVSSAFSKVETASVAAYLYVFGSGLLGGFLFQFMLEGLSFPRG 494
Query: 111 WIIVMELYPGFSLFRGLYEFSQSSFTGDALGTHGMRWGDLSD 152
WI VMELYPGFSL+RGLYEFSQ + G+ GM+W SD
Sbjct: 495 WIFVMELYPGFSLYRGLYEFSQYALKRQLNGSDGMKWKYFSD 536
>AT5G61700.1 | Symbols: ATATH16, ATH16 | ABC2 homolog 16 |
chr5:24793864-24797944 FORWARD LENGTH=888
Length = 888
Score = 143 bits (361), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/152 (51%), Positives = 95/152 (62%), Gaps = 34/152 (22%)
Query: 1 MMKMHGLGDGPYWLISYGYFLAISAIYVLCFVIFGSVIGLKFFTMNDYSIQFVFYFLFIN 60
+MKMHGLGDG LK+F NDYSIQFVFYF++ N
Sbjct: 358 IMKMHGLGDG-----------------------------LKYFRRNDYSIQFVFYFIYSN 388
Query: 61 LQISLAFLLACLFSNVKTAAVFAYIGVFGTGSLGASLLQFFVQEKSFSRGWIIVMELYPG 120
LQISLAFL++ +FS VKT V AYI V+GTG LG+ L Q ++ +SF WI+ MELYPG
Sbjct: 389 LQISLAFLVSSIFSKVKTVTVIAYILVYGTGLLGSFLFQKMIETQSFPEEWILAMELYPG 448
Query: 121 FSLFRGLYEFSQSSFTGDALGTHGMRWGDLSD 152
FSL+RGLYEFSQ + G+ GM+W DLSD
Sbjct: 449 FSLYRGLYEFSQYASRGN-----GMKWQDLSD 475
>AT3G47760.1 | Symbols: ATATH4, ATH4, ABCA5 | ABC2 homolog 4 |
chr3:17611787-17616639 FORWARD LENGTH=872
Length = 872
Score = 141 bits (356), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/152 (51%), Positives = 102/152 (67%), Gaps = 24/152 (15%)
Query: 1 MMKMHGLGDGPYWLISYGYFLAISAIYVLCFVIFGSVIGLKFFTMNDYSIQFVFYFLFIN 60
+MKMHGLGD +S +++L +GLKFF NDYSIQF+FYFL IN
Sbjct: 340 IMKMHGLGDE-----------QVSELFLL--------VGLKFFRFNDYSIQFIFYFLCIN 380
Query: 61 LQISLAFLLACLFSNVKTAAVFAYIGVFGTGSLGASLLQFFVQEKSFSRGWIIVMELYPG 120
LQIS+AFL++ FS ++TA+V AY+ VFG+G LGA L QF ++ WI +MELYPG
Sbjct: 381 LQISIAFLVSSAFSKIETASVAAYLYVFGSGLLGAFLFQFLLEG-----SWIYIMELYPG 435
Query: 121 FSLFRGLYEFSQSSFTGDALGTHGMRWGDLSD 152
FSL+RGLYEFSQ +F + G+ GM+W D +D
Sbjct: 436 FSLYRGLYEFSQYAFKRNLNGSGGMKWKDFND 467
>AT5G61740.1 | Symbols: ATATH14, ATH14 | ABC2 homolog 14 |
chr5:24808484-24812597 FORWARD LENGTH=848
Length = 848
Score = 123 bits (308), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 82/119 (68%), Gaps = 5/119 (4%)
Query: 34 FGSVIGLKFFTMNDYSIQFVFYFLFINLQISLAFLLACLFSNVKTAAVFAYIGVFGTGSL 93
G IGL++F +NDYS+QF+FYF+F+NLQIS AFL + +FS VKTA V AY VF +G L
Sbjct: 327 LGIAIGLRYFRLNDYSVQFIFYFIFVNLQISFAFLASSIFSKVKTATVVAYTLVFASGLL 386
Query: 94 GASLLQFFVQEKSFSRGWIIVMELYPGFSLFRGLYEFSQSSFTGDALGTHGMRWGDLSD 152
G L ++ +F I+ +ELYPGFSLFRGLYEF+Q + G +GM+W DL +
Sbjct: 387 GMFLFGELLESPTFPEKGILALELYPGFSLFRGLYEFAQYASRG-----NGMKWKDLKE 440